View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10395_low_16 (Length: 220)

Name: NF10395_low_16
Description: NF10395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10395_low_16
NF10395_low_16
[»] chr8 (19 HSPs)
chr8 (1-201)||(24691837-24692036)
chr8 (2-52)||(31654687-31654737)
chr8 (2-59)||(6552729-6552786)
chr8 (2-59)||(33289260-33289317)
chr8 (2-58)||(54612-54668)
chr8 (2-58)||(2890162-2890218)
chr8 (2-58)||(7785778-7785834)
chr8 (2-58)||(15888352-15888408)
chr8 (2-58)||(39571203-39571259)
chr8 (1-47)||(15688041-15688087)
chr8 (2-51)||(13578931-13578980)
chr8 (2-58)||(3304278-3304334)
chr8 (2-58)||(7805699-7805755)
chr8 (2-58)||(12763654-12763710)
chr8 (2-58)||(25601000-25601056)
chr8 (4-52)||(28463617-28463665)
chr8 (2-58)||(32211363-32211419)
chr8 (2-58)||(43199354-43199410)
chr8 (2-58)||(44498187-44498243)
[»] chr5 (13 HSPs)
chr5 (2-68)||(11795242-11795308)
chr5 (2-58)||(6126898-6126954)
chr5 (2-58)||(9395424-9395480)
chr5 (2-58)||(13103098-13103154)
chr5 (2-58)||(17025698-17025754)
chr5 (2-58)||(36563538-36563594)
chr5 (2-58)||(37148955-37149011)
chr5 (2-58)||(41989407-41989463)
chr5 (2-37)||(583063-583098)
chr5 (2-52)||(23360016-23360066)
chr5 (2-46)||(13033125-13033169)
chr5 (2-58)||(21576020-21576076)
chr5 (2-58)||(37642028-37642084)
[»] chr2 (18 HSPs)
chr2 (2-58)||(41492896-41492952)
chr2 (2-58)||(3055632-3055688)
chr2 (2-58)||(6648519-6648575)
chr2 (2-58)||(9047755-9047811)
chr2 (2-58)||(12337937-12337993)
chr2 (2-58)||(13197710-13197766)
chr2 (2-58)||(15372300-15372356)
chr2 (2-58)||(15896916-15896972)
chr2 (2-58)||(37990013-37990069)
chr2 (2-58)||(38917522-38917578)
chr2 (2-58)||(41478639-41478695)
chr2 (2-58)||(44398760-44398816)
chr2 (2-59)||(16044316-16044373)
chr2 (2-47)||(16243794-16243839)
chr2 (2-47)||(44397621-44397666)
chr2 (2-58)||(13344558-13344614)
chr2 (2-58)||(30099182-30099238)
chr2 (2-58)||(37666610-37666666)
[»] chr7 (14 HSPs)
chr7 (2-69)||(38441534-38441601)
chr7 (2-58)||(1738447-1738503)
chr7 (2-58)||(7240823-7240879)
chr7 (2-58)||(7482299-7482355)
chr7 (2-58)||(9268830-9268886)
chr7 (2-58)||(22285773-22285829)
chr7 (2-58)||(46840934-46840990)
chr7 (2-53)||(33418450-33418501)
chr7 (2-59)||(94317-94374)
chr7 (2-47)||(36016207-36016252)
chr7 (2-47)||(38063924-38063969)
chr7 (2-58)||(23314139-23314195)
chr7 (2-58)||(31319399-31319455)
chr7 (2-46)||(36583469-36583513)
[»] chr6 (14 HSPs)
chr6 (1-60)||(8186440-8186499)
chr6 (2-58)||(2830409-2830465)
chr6 (2-58)||(6330189-6330245)
chr6 (2-58)||(8099604-8099660)
chr6 (2-58)||(8382969-8383025)
chr6 (2-58)||(9644770-9644826)
chr6 (2-58)||(9650787-9650843)
chr6 (2-58)||(11572145-11572201)
chr6 (2-58)||(13853593-13853649)
chr6 (76-132)||(20809087-20809143)
chr6 (2-58)||(26602397-26602453)
chr6 (2-58)||(28747134-28747190)
chr6 (2-47)||(8417804-8417849)
chr6 (2-58)||(6068640-6068696)
[»] chr1 (19 HSPs)
chr1 (3-58)||(11897129-11897184)
chr1 (2-68)||(44668084-44668149)
chr1 (1-58)||(16448181-16448238)
chr1 (2-59)||(27159357-27159414)
chr1 (2-58)||(11796007-11796063)
chr1 (2-58)||(14984911-14984967)
chr1 (2-58)||(17556827-17556883)
chr1 (2-58)||(25694393-25694449)
chr1 (2-58)||(31842795-31842851)
chr1 (2-58)||(39401966-39402022)
chr1 (2-58)||(47777481-47777537)
chr1 (2-52)||(9981721-9981771)
chr1 (4-58)||(12483628-12483682)
chr1 (1-58)||(11897054-11897111)
chr1 (2-58)||(1050962-1051018)
chr1 (2-58)||(26471065-26471121)
chr1 (2-58)||(34042770-34042826)
chr1 (2-58)||(47216699-47216755)
chr1 (2-58)||(47969769-47969825)
[»] chr4 (18 HSPs)
chr4 (2-59)||(6121892-6121949)
chr4 (2-59)||(47833685-47833742)
chr4 (1-58)||(51894582-51894639)
chr4 (2-47)||(52756749-52756794)
chr4 (2-58)||(3422134-3422190)
chr4 (4-58)||(5986952-5987006)
chr4 (4-58)||(17236864-17236918)
chr4 (1-58)||(4780368-4780425)
chr4 (2-59)||(46797799-46797856)
chr4 (2-58)||(3372195-3372251)
chr4 (2-58)||(3993050-3993106)
chr4 (2-58)||(20538686-20538742)
chr4 (2-58)||(33621870-33621926)
chr4 (2-58)||(41469766-41469822)
chr4 (2-58)||(42797806-42797862)
chr4 (2-58)||(47838617-47838673)
chr4 (2-58)||(48336337-48336393)
chr4 (2-58)||(53337444-53337500)
[»] chr3 (24 HSPs)
chr3 (2-58)||(10298053-10298109)
chr3 (2-58)||(19557052-19557108)
chr3 (2-58)||(34080030-34080086)
chr3 (2-58)||(40690996-40691052)
chr3 (2-58)||(48340471-48340527)
chr3 (2-58)||(49823381-49823437)
chr3 (2-52)||(9111500-9111550)
chr3 (2-52)||(17653786-17653836)
chr3 (2-52)||(37508995-37509045)
chr3 (1-47)||(42170357-42170403)
chr3 (2-52)||(42507361-42507411)
chr3 (2-47)||(8817397-8817442)
chr3 (1-58)||(9213516-9213573)
chr3 (2-59)||(21295325-21295382)
chr3 (2-47)||(22722005-22722050)
chr3 (2-59)||(38964466-38964523)
chr3 (1-29)||(2131745-2131773)
chr3 (2-58)||(2787832-2787888)
chr3 (2-58)||(8437499-8437555)
chr3 (1-33)||(14848282-14848314)
chr3 (72-116)||(30790775-30790819)
chr3 (2-46)||(33942944-33942988)
chr3 (2-58)||(46208104-46208160)
chr3 (2-58)||(51406747-51406803)
[»] scaffold0009 (1 HSPs)
scaffold0009 (4-58)||(49581-49635)
[»] scaffold1707 (1 HSPs)
scaffold1707 (2-46)||(1409-1453)
[»] scaffold0482 (1 HSPs)
scaffold0482 (2-58)||(12934-12990)
[»] scaffold0464 (1 HSPs)
scaffold0464 (2-58)||(6131-6187)
[»] scaffold0204 (1 HSPs)
scaffold0204 (2-58)||(23859-23915)


Alignment Details
Target: chr8 (Bit Score: 173; Significance: 3e-93; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 24692036 - 24691837
Alignment:
Q  1 cagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtaccatatttgttaatttatgtgtattttccaaatgtgtgtttg 100  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24692036 cagatatatcaacttttgttgacccaaatttcttttaaaaataggaccggaacgagtaccatatttgttaatttatgtgtattttccaaatgtgtgtttg 24691937  T
Q  101 ttgtagaagataaaaagtagaagagagatagatagaaacataaacaaagtgtcactttgagatgtctatattttgattttcaaataacacaagaaatgtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  24691936 ttgtagaagataaaaagtagaagagagatagatagaaacataaacaaagtgtcac-ttgagatgtctatattttgattttcaaataacacaagagatgtt 24691838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 31654687 - 31654737
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 52  Q
    ||||||||||||||||||||||||||| |||||||| ||| ||||| ||||    
T  31654687 agatacatcaacttttgttgacccaaaattcttttataaataggaccggag 31654737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 6552729 - 6552786
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 59  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| ||||||    
T  6552729 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtac 6552786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 33289317 - 33289260
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 59  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| ||||||    
T  33289317 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtac 33289260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 54668 - 54612
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  54668 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 54612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 2890218 - 2890162
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  2890218 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 7785834 - 7785778
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  7785834 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 15888408 - 15888352
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| || ||||||| |||||    
T  15888408 agatacatcaacttttgttgacccaaaattctcttataaatagaactggagggagta 15888352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 39571259 - 39571203
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  39571259 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39571203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15688087 - 15688041
Alignment:
Q  1 cagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 47  Q
    ||||||||||||||||||||||||||| ||||| ||| ||| |||||    
T  15688087 cagatacatcaacttttgttgacccaactttctcttataaacaggac 15688041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 13578931 - 13578980
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactgga 51  Q
    ||||||||||||||||||||||||||| |||| ||| ||| | |||||||    
T  13578931 agatacatcaacttttgttgacccaaaattctcttataaatatgactgga 13578980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 3304334 - 3304278
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| || | ||| ||| ||||| |||| |||||    
T  3304334 agatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 7805755 - 7805699
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||| ||||||||| |||| ||| ||| ||||| |||| |||||    
T  7805755 agatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 7805699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 12763710 - 12763654
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| || | ||| ||| ||||| |||| |||||    
T  12763710 agatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 12763654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 25601056 - 25601000
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    |||||||| |||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  25601056 agatacattaacttttgttgacccaaaattctcttataaataggaccggagggagta 25601000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 28463665 - 28463617
Alignment:
Q  4 atacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 52  Q
    |||||||||||||||||||||||| ||||| ||| ||| ||||| ||||    
T  28463665 atacatcaacttttgttgacccaactttctcttataaataggaccggag 28463617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 32211419 - 32211363
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||| ||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  32211419 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 32211363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 43199410 - 43199354
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||| ||| |||| ||| ||| ||||| |||| |||||    
T  43199410 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 43199354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 44498243 - 44498187
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    |||||||||||||||| |||||||||| |||| ||| ||| ||||| |||| |||||    
T  44498243 agatacatcaacttttattgacccaaaattctcttataaataggaccggagggagta 44498187  T

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Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 11795242 - 11795308
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtaccatatttgt 68  Q
    ||||||||||||||||||||||||||| |||| ||| ||| |||||||||| |||||  ||||||||    
T  11795242 agatacatcaacttttgttgacccaaaattctcttataaataggactggagggagtataatatttgt 11795308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 6126898 - 6126954
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  6126898 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 9395424 - 9395480
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  9395424 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9395480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 13103098 - 13103154
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  13103098 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13103154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 17025698 - 17025754
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  17025698 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 17025754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 36563594 - 36563538
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  36563594 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 36563538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 37149011 - 37148955
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  37149011 agatacatcaacttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 41989463 - 41989407
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  41989463 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 41989407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 583063 - 583098
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttctttta 37  Q
    ||||||||||||||||||||||||||| ||||||||    
T  583063 agatacatcaacttttgttgacccaaaattctttta 583098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 23360016 - 23360066
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 52  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||    
T  23360016 agatacatcaacttttgttgacccaaaattctcttataaataggaccggag 23360066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 13033125 - 13033169
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagagga 46  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||    
T  13033125 agatacatcaacttttgttgacccaaaattctcttataaatagga 13033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 21576020 - 21576076
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||| ||||| |||| ||| ||| ||||| |||| |||||    
T  21576020 agatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 21576076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 37642028 - 37642084
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    |||||||||||||||| |||||||||| |||| ||| ||| ||||| |||| |||||    
T  37642028 agatacatcaacttttattgacccaaaattctcttataaataggaccggagggagta 37642084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 41492952 - 41492896
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||||| |||| |||||    
T  41492952 agatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagta 41492896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 3055632 - 3055688
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  3055632 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 3055688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 6648575 - 6648519
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  6648575 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6648519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 9047811 - 9047755
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  9047811 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9047755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 12337993 - 12337937
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  12337993 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 13197766 - 13197710
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  13197766 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 15372300 - 15372356
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  15372300 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 15896916 - 15896972
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  15896916 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 37990069 - 37990013
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  37990069 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 37990013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 38917578 - 38917522
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  38917578 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 38917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 41478695 - 41478639
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  41478695 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 41478639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 44398760 - 44398816
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  44398760 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 16044373 - 16044316
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 59  Q
    ||||||||||||||| ||||||||||| |||| ||| ||| ||||| |||| ||||||    
T  16044373 agatacatcaactttagttgacccaaaattctcttataaataggaccggagggagtac 16044316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 16243839 - 16243794
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggac 47  Q
    ||||||||||||||||||||||||||| |||| ||| ||| |||||    
T  16243839 agatacatcaacttttgttgacccaaaattctcttataaataggac 16243794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 44397621 - 44397666
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggac 47  Q
    ||||||||||||||||||||||||||| |||| ||| ||| |||||    
T  44397621 agatacatcaacttttgttgacccaaaattctcttataaataggac 44397666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 13344558 - 13344614
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||| ||||| |||| ||| ||| ||||| |||| |||||    
T  13344558 agatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 13344614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 30099238 - 30099182
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| | | ||| ||||| |||| |||||    
T  30099238 agatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagta 30099182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 37666666 - 37666610
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||| ||||||||||| |||| ||| ||| ||||| |||| |||||    
T  37666666 agatacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 37666610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 38441534 - 38441601
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtaccatatttgtt 69  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||  ||||| |||||||||    
T  38441534 agatacatcaacttttgttgacccaaaattctcttataaataggaccggaggaagtactatatttgtt 38441601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 1738503 - 1738447
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  1738503 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 1738447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 7240823 - 7240879
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  7240823 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7240879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 7482299 - 7482355
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  7482299 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7482355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 9268830 - 9268886
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  9268830 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 22285773 - 22285829
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  22285773 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 46840934 - 46840990
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  46840934 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 33418450 - 33418501
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagc 53  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||||    
T  33418450 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagc 33418501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 94374 - 94317
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 59  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||  |||| ||||||    
T  94374 agatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagtac 94317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 36016252 - 36016207
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggac 47  Q
    ||||||||||||||||||||||||||| |||| ||| ||| |||||    
T  36016252 agatacatcaacttttgttgacccaaaattctcttataaataggac 36016207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 38063969 - 38063924
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggac 47  Q
    ||||||||||||||||||||||||||| |||| ||| ||| |||||    
T  38063969 agatacatcaacttttgttgacccaaaattctcttataaataggac 38063924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 23314195 - 23314139
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||| ||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  23314195 agatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 31319455 - 31319399
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| || || |||| |||||    
T  31319455 agatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 36583469 - 36583513
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagagga 46  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||    
T  36583469 agatacatcaacttttgttgacccaaaattctcttataaatagga 36583513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8186440 - 8186499
Alignment:
Q  1 cagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtacc 60  Q
    |||||||||||||||||||||| |||||||||||||| ||| ||||| || | |||||||    
T  8186440 cagatacatcaacttttgttgatccaaatttcttttataaataggaccggggggagtacc 8186499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 2830409 - 2830465
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  2830409 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 6330189 - 6330245
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  6330189 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6330245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 8099604 - 8099660
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  8099604 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8099660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 8383025 - 8382969
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  8383025 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 9644770 - 9644826
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  9644770 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9644826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 9650787 - 9650843
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  9650787 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9650843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 11572201 - 11572145
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  11572201 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11572145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 13853649 - 13853593
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  13853649 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 20809087 - 20809143
Alignment:
Q  76 tgtgtattttccaaatgtgtgtttgttgtagaagataaaaagtagaagagagataga 132  Q
    ||||||||||  |||||||||| ||||||| |||||||||||||  |||||||||||    
T  20809087 tgtgtattttttaaatgtgtgtatgttgtaaaagataaaaagtaagagagagataga 20809143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 26602397 - 26602453
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  26602397 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 26602453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 28747190 - 28747134
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||||| || |||||    
T  28747190 agatacatcaacttttgttgacccaaaattctcttataaataggactgaagggagta 28747134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 8417849 - 8417804
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggac 47  Q
    ||||||||||||||||||||||||||| |||| ||| ||| |||||    
T  8417849 agatacatcaacttttgttgacccaaaattctcttataaataggac 8417804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 6068640 - 6068696
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    |||||||||||||||||||||| |||| |||| ||| ||| ||||| |||| |||||    
T  6068640 agatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagta 6068696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 11897129 - 11897184
Alignment:
Q  3 gatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||| |||| |||||    
T  11897129 gatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagta 11897184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 44668149 - 44668084
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtaccatatttgt 68  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| ||||| |||||||||    
T  44668149 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta-catatttgt 44668084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16448181 - 16448238
Alignment:
Q  1 cagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| ||||| ||| ||| ||||| |||| |||||    
T  16448181 cagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagta 16448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 27159414 - 27159357
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 59  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| ||||||    
T  27159414 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtac 27159357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 11796007 - 11796063
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  11796007 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 14984911 - 14984967
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  14984911 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 14984967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 17556827 - 17556883
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    |||||||||||||||||||||||||| ||||| ||| ||| ||||| |||| |||||    
T  17556827 agatacatcaacttttgttgacccaagtttctcttataaataggaccggagggagta 17556883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 25694393 - 25694449
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  25694393 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 25694449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 31842851 - 31842795
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  31842851 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 39402022 - 39401966
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  39402022 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 47777537 - 47777481
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  47777537 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 9981721 - 9981771
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 52  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||    
T  9981721 agatacatcaacttttgttgacccaaaattctcttataaataggaccggag 9981771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 12483682 - 12483628
Alignment:
Q  4 atacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  12483682 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12483628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11897111 - 11897054
Alignment:
Q  1 cagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    |||||||||||||||||||||||| || ||||| ||| ||| ||||| |||| |||||    
T  11897111 cagatacatcaacttttgttgacctaactttctcttataaataggaccggagggagta 11897054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 1050962 - 1051018
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||| ||||||||||| |||| ||| ||| ||||| |||| |||||    
T  1050962 agatacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 1051018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 26471121 - 26471065
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||| ||||| |||| ||| ||| ||||| |||| |||||    
T  26471121 agatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 34042770 - 34042826
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| || || |||| |||||    
T  34042770 agatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 34042826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 47216755 - 47216699
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| || || |||| |||||    
T  47216755 agatacatcaacttttgttgacccaaaattctcttataaatagtaccggagggagta 47216699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 47969769 - 47969825
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||| ||||| || ||||| ||| ||||| |||| |||||    
T  47969769 agatacatcaacttttgttgatccaaaattattttataaataggaccggagggagta 47969825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 6121949 - 6121892
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 59  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| ||||||    
T  6121949 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtac 6121892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 47833685 - 47833742
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 59  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| ||||||    
T  47833685 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtac 47833742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 51894639 - 51894582
Alignment:
Q  1 cagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    |||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  51894639 cagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 52756749 - 52756794
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggac 47  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||    
T  52756749 agatacatcaacttttgttgacccaaaattcttttataaataggac 52756794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 3422134 - 3422190
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  3422134 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 3422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 5986952 - 5987006
Alignment:
Q  4 atacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  5986952 atacatcaacttttgttgacccaaaattctcttataaataggaccggagagagta 5987006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 17236864 - 17236918
Alignment:
Q  4 atacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    |||||||||||||||||||||||||||| | ||| ||| ||||| |||| |||||    
T  17236864 atacatcaacttttgttgacccaaatttttcttataaataggaccggagagagta 17236918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4780368 - 4780425
Alignment:
Q  1 cagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||| |||||||||||||| |||||||| ||| ||| ||||| |||| |||||    
T  4780368 cagatacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 46797799 - 46797856
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 59  Q
    ||||| ||||||||||||||||||||| |||| ||| ||| ||||| |||| ||||||    
T  46797799 agatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagtac 46797856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 3372195 - 3372251
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| || | ||| ||| ||||| |||| |||||    
T  3372195 agatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 3993050 - 3993106
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| | ||| |||| |||||    
T  3993050 agatacatcaacttttgttgacccaaaattctcttataaataagaccggagggagta 3993106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 20538742 - 20538686
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||| ||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  20538742 agatacatcaaattttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 33621870 - 33621926
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| || | ||| ||| ||||| |||| |||||    
T  33621870 agatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 33621926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 41469822 - 41469766
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||| ||| |||| ||| ||| ||||| |||| |||||    
T  41469822 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 41469766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 42797806 - 42797862
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||| ||| |||| ||| ||| ||||| |||| |||||    
T  42797806 agatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 47838673 - 47838617
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||| ||| |||| ||| ||| ||||| |||| |||||    
T  47838673 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 47838617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 48336337 - 48336393
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| || | ||| ||| ||||| |||| |||||    
T  48336337 agatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 48336393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 53337444 - 53337500
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    |||||||||||||||| |||||||||| |||| ||| ||| ||||| |||| |||||    
T  53337444 agatacatcaacttttattgacccaaaattctcttataaataggaccggagggagta 53337500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000001; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 10298053 - 10298109
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  10298053 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 10298109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 19557108 - 19557052
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  19557108 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 34080086 - 34080030
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  34080086 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 40691052 - 40690996
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  40691052 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 40690996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 48340471 - 48340527
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  48340471 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 49823437 - 49823381
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  49823437 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49823381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 9111550 - 9111500
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 52  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||    
T  9111550 agatacatcaacttttgttgacccaaaattctcttataaataggaccggag 9111500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 17653786 - 17653836
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 52  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||    
T  17653786 agatacatcaacttttgttgacccaaaattctcttataaataggaccggag 17653836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 37508995 - 37509045
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 52  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||    
T  37508995 agatacatcaacttttgttgacccaaaattctcttataaataggaccggag 37509045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42170403 - 42170357
Alignment:
Q  1 cagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 47  Q
    |||||||||||||||||||||||||||| |||| ||| ||| |||||    
T  42170403 cagatacatcaacttttgttgacccaaaattctcttataaataggac 42170357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 42507411 - 42507361
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 52  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||    
T  42507411 agatacatcaacttttgttgacccaaaattctcttataaataggaccggag 42507361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 8817442 - 8817397
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggac 47  Q
    ||||||||||||||||||||||||||| |||| ||| ||| |||||    
T  8817442 agatacatcaacttttgttgacccaaaattctcttataaataggac 8817397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9213573 - 9213516
Alignment:
Q  1 cagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    |||||||||||||||||||||||  |||| ||||||| ||| ||||| |||| |||||    
T  9213573 cagatacatcaacttttgttgactaaaatgtcttttataaataggaccggagggagta 9213516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 21295382 - 21295325
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 59  Q
    ||||||||||||||||||||||| ||| |||| ||| ||| ||||| |||| ||||||    
T  21295382 agatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagtac 21295325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 22722005 - 22722050
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggac 47  Q
    ||||||||||||||||||||||||||| |||| ||| ||| |||||    
T  22722005 agatacatcaacttttgttgacccaaaattctcttataaataggac 22722050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 38964466 - 38964523
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 59  Q
    ||||||||||||||||||||||| ||| |||| ||| ||| ||||| |||| ||||||    
T  38964466 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtac 38964523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 2131745 - 2131773
Alignment:
Q  1 cagatacatcaacttttgttgacccaaat 29  Q
    |||||||||||||||||||||||||||||    
T  2131745 cagatacatcaacttttgttgacccaaat 2131773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 2787888 - 2787832
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||| ||||||||| |||| ||| ||| ||||| |||| |||||    
T  2787888 agatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 8437499 - 8437555
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    |||||||||||||||||||||| |||| |||| ||| ||| ||||| |||| |||||    
T  8437499 agatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagta 8437555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14848314 - 14848282
Alignment:
Q  1 cagatacatcaacttttgttgacccaaatttct 33  Q
    ||||||||||||||||||||||||||| |||||    
T  14848314 cagatacatcaacttttgttgacccaattttct 14848282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 30790775 - 30790819
Alignment:
Q  72 tttatgtgtattttccaaatgtgtgtttgttgtagaagataaaaa 116  Q
    ||||||||||||||  ||||||||||  |||||||||||||||||    
T  30790775 tttatgtgtattttttaaatgtgtgtaagttgtagaagataaaaa 30790819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 33942988 - 33942944
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagagga 46  Q
    |||||||||||||||||||||||||| ||||| ||| ||| ||||    
T  33942988 agatacatcaacttttgttgacccaagtttctcttataaatagga 33942944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 46208104 - 46208160
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||| ||| |||| ||| ||| ||||| |||| |||||    
T  46208104 agatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 46208160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 51406747 - 51406803
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||| ||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  51406747 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 51406803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 49581 - 49635
Alignment:
Q  4 atacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  49581 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 1409 - 1453
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagagga 46  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||    
T  1409 agatacatcaacttttgttgacccaaaattctcttataaatagga 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 12934 - 12990
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||| ||||||||| |||| ||| ||| ||||| |||| |||||    
T  12934 agatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 12990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 6187 - 6131
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| || | ||| ||| ||||| |||| |||||    
T  6187 agatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 23859 - 23915
Alignment:
Q  2 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 58  Q
    ||||||||||||||||||||||||||| || | ||| ||| ||||| |||| |||||    
T  23859 agatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 23915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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