View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10395_low_5 (Length: 348)
Name: NF10395_low_5
Description: NF10395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10395_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 45307306 - 45306975
Alignment:
| Q |
1 |
agttaacgtacttgttccttaaacatggcttcatgtttgagtattgtctgttttacaagctcctggttgtagcctaaatgggtacaaggtgatgataatt |
100 |
Q |
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| T |
45307306 |
agttaacgtacttgttccttaaacatggcttcatgtttgagtattgtctgttttacaagctcctggttgtagcctaaatgggtacaaggtgatgataatt |
45307207 |
T |
|
| Q |
101 |
ggaagggacccatgttgtagaaaccagtccttaattcattattaacattagatgatgaggtccatgtgctacctccagagtcaaagatgagctcctttgt |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45307206 |
ggaagggacccatgttgtagaaatcagtccttaattcattattaacattagatgatgaggtccatgtgctacctccagagtcaaagatgagctcctttgt |
45307107 |
T |
|
| Q |
201 |
tgaatagtattctctaaaattgccattggtttgcacatttgcacctaacaatgccataaatgatagtgtaggaggtttcgatcaaacaaggtatagcatg |
300 |
Q |
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| T |
45307106 |
taaatagtattctctaaaattgccattagtttgcacatttgcacctaacaatgccataaatgatagtgtaggaggtttcaatcaaacaaggtatagcatg |
45307007 |
T |
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| Q |
301 |
gtaccctcaaattcaaaggaaggacaccctgc |
332 |
Q |
| |
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|||||||||| ||||||||||||||||||||| |
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| T |
45307006 |
gtaccctcaatttcaaaggaaggacaccctgc |
45306975 |
T |
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