View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10396_high_5 (Length: 462)

Name: NF10396_high_5
Description: NF10396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10396_high_5
NF10396_high_5
[»] chr8 (32 HSPs)
chr8 (18-231)||(4611674-4611887)
chr8 (295-358)||(34897085-34897148)
chr8 (300-358)||(4786339-4786397)
chr8 (301-363)||(11803254-11803316)
chr8 (300-358)||(11927087-11927145)
chr8 (389-441)||(4611449-4611501)
chr8 (295-350)||(12606825-12606880)
chr8 (295-350)||(13844592-13844647)
chr8 (299-350)||(14134707-14134758)
chr8 (295-358)||(31109514-31109577)
chr8 (300-358)||(11944665-11944723)
chr8 (296-350)||(20679392-20679446)
chr8 (302-363)||(4611529-4611590)
chr8 (300-365)||(25566834-25566899)
chr8 (269-358)||(31556997-31557085)
chr8 (295-352)||(33405380-33405437)
chr8 (306-358)||(24362209-24362261)
chr8 (300-360)||(24669431-24669491)
chr8 (302-350)||(31236580-31236628)
chr8 (302-358)||(39954282-39954338)
chr8 (295-350)||(3025559-3025614)
chr8 (299-358)||(28384994-28385053)
chr8 (299-350)||(29447110-29447161)
chr8 (299-357)||(33382019-33382077)
chr8 (301-350)||(7658471-7658520)
chr8 (307-364)||(14731706-14731763)
chr8 (263-358)||(26714050-26714143)
chr8 (295-348)||(38079009-38079062)
chr8 (305-358)||(41831946-41831999)
chr8 (319-359)||(18067954-18067994)
chr8 (300-340)||(26902176-26902216)
chr8 (301-349)||(40332200-40332248)
[»] chr5 (28 HSPs)
chr5 (263-358)||(28588638-28588733)
chr5 (300-364)||(6471890-6471954)
chr5 (278-357)||(30502367-30502446)
chr5 (278-357)||(30542710-30542789)
chr5 (300-358)||(3966503-3966561)
chr5 (308-365)||(24273039-24273096)
chr5 (308-365)||(24389118-24389175)
chr5 (269-363)||(42893355-42893449)
chr5 (300-357)||(36838544-36838601)
chr5 (306-358)||(7175026-7175078)
chr5 (300-364)||(41091258-41091322)
chr5 (306-357)||(12264836-12264887)
chr5 (295-350)||(16203791-16203846)
chr5 (305-360)||(23015995-23016050)
chr5 (300-358)||(2436922-2436980)
chr5 (300-358)||(11685939-11685997)
chr5 (300-350)||(13287400-13287450)
chr5 (300-350)||(39205888-39205938)
chr5 (299-348)||(14873527-14873576)
chr5 (295-348)||(18421837-18421890)
chr5 (289-350)||(21191046-21191107)
chr5 (306-350)||(9449477-9449521)
chr5 (295-363)||(12927649-12927717)
chr5 (324-364)||(19746717-19746757)
chr5 (303-363)||(26609348-26609408)
chr5 (306-358)||(27144463-27144515)
chr5 (303-355)||(30098329-30098381)
chr5 (300-360)||(32630736-32630796)
[»] chr7 (35 HSPs)
chr7 (300-358)||(1433454-1433512)
chr7 (279-363)||(20549786-20549870)
chr7 (302-356)||(2425736-2425790)
chr7 (300-358)||(22602711-22602769)
chr7 (295-350)||(5835255-5835310)
chr7 (295-358)||(28155570-28155633)
chr7 (295-358)||(32287459-32287522)
chr7 (300-358)||(19206050-19206108)
chr7 (300-358)||(32308120-32308178)
chr7 (269-350)||(21880160-21880241)
chr7 (300-348)||(9482944-9482992)
chr7 (300-364)||(16341490-16341554)
chr7 (303-359)||(27732243-27732299)
chr7 (295-350)||(3721101-3721156)
chr7 (295-358)||(22484025-22484088)
chr7 (295-358)||(23191896-23191959)
chr7 (295-358)||(26733304-26733367)
chr7 (295-358)||(27093409-27093472)
chr7 (295-358)||(27184829-27184892)
chr7 (295-350)||(37870901-37870956)
chr7 (302-360)||(3520345-3520403)
chr7 (300-358)||(5548676-5548734)
chr7 (300-350)||(7328692-7328742)
chr7 (301-355)||(17851434-17851488)
chr7 (300-350)||(19992009-19992059)
chr7 (288-350)||(22868050-22868112)
chr7 (304-358)||(26329387-26329441)
chr7 (307-364)||(8160410-8160467)
chr7 (301-350)||(15902830-15902879)
chr7 (317-358)||(29787387-29787428)
chr7 (290-359)||(42720881-42720950)
chr7 (297-337)||(640134-640174)
chr7 (324-360)||(11700801-11700837)
chr7 (303-359)||(38134410-38134466)
chr7 (295-351)||(38143230-38143286)
[»] chr6 (33 HSPs)
chr6 (277-357)||(7265571-7265651)
chr6 (295-358)||(5732506-5732569)
chr6 (295-358)||(19040352-19040415)
chr6 (240-358)||(7377979-7378096)
chr6 (300-350)||(9025495-9025545)
chr6 (300-358)||(9027178-9027236)
chr6 (311-364)||(5462680-5462733)
chr6 (290-347)||(13360363-13360420)
chr6 (237-309)||(5000554-5000625)
chr6 (300-355)||(9617437-9617492)
chr6 (295-358)||(9658879-9658942)
chr6 (299-350)||(11784216-11784267)
chr6 (295-357)||(31579223-31579283)
chr6 (300-358)||(9629383-9629441)
chr6 (301-350)||(7086803-7086852)
chr6 (304-357)||(30866149-30866202)
chr6 (306-358)||(17341671-17341723)
chr6 (300-360)||(32320670-32320730)
chr6 (300-360)||(32511667-32511727)
chr6 (295-358)||(13851736-13851799)
chr6 (299-350)||(19044472-19044523)
chr6 (295-350)||(21924931-21924986)
chr6 (300-350)||(7996379-7996429)
chr6 (300-350)||(8022372-8022422)
chr6 (300-350)||(9195755-9195805)
chr6 (300-358)||(20371111-20371169)
chr6 (300-346)||(26562701-26562747)
chr6 (300-350)||(34073348-34073398)
chr6 (305-346)||(11591876-11591917)
chr6 (300-365)||(14155240-14155305)
chr6 (295-364)||(28715289-28715358)
chr6 (270-350)||(16833316-16833396)
chr6 (300-344)||(17327656-17327700)
[»] chr2 (28 HSPs)
chr2 (300-364)||(44860314-44860378)
chr2 (280-350)||(5367200-5367270)
chr2 (297-358)||(18276521-18276582)
chr2 (302-363)||(23718021-23718082)
chr2 (302-363)||(24105693-24105754)
chr2 (301-357)||(39279676-39279732)
chr2 (307-358)||(21616762-21616813)
chr2 (295-357)||(31018591-31018653)
chr2 (300-358)||(37411245-37411303)
chr2 (295-355)||(34691801-34691861)
chr2 (295-355)||(34714213-34714273)
chr2 (295-350)||(5473336-5473391)
chr2 (289-340)||(20242717-20242768)
chr2 (271-358)||(30404822-30404909)
chr2 (303-350)||(30471046-30471093)
chr2 (306-357)||(35449514-35449565)
chr2 (300-363)||(42832277-42832340)
chr2 (300-357)||(2331795-2331850)
chr2 (300-350)||(18889592-18889642)
chr2 (300-358)||(24975326-24975384)
chr2 (312-350)||(25846749-25846787)
chr2 (300-358)||(28677909-28677966)
chr2 (303-357)||(30527599-30527653)
chr2 (299-345)||(38355887-38355933)
chr2 (269-350)||(2415325-2415406)
chr2 (269-357)||(18570973-18571061)
chr2 (317-357)||(22084850-22084890)
chr2 (317-357)||(28412351-28412391)
[»] chr1 (48 HSPs)
chr1 (295-358)||(2896117-2896180)
chr1 (301-363)||(1864882-1864944)
chr1 (295-357)||(9709821-9709883)
chr1 (277-347)||(43492472-43492542)
chr1 (300-364)||(34371708-34371771)
chr1 (295-358)||(36878461-36878524)
chr1 (289-364)||(40181865-40181940)
chr1 (301-350)||(10572591-10572640)
chr1 (269-358)||(21530689-21530778)
chr1 (300-364)||(29229455-29229520)
chr1 (295-367)||(5898262-5898334)
chr1 (300-348)||(44482240-44482288)
chr1 (295-358)||(2784556-2784619)
chr1 (300-363)||(38503315-38503378)
chr1 (269-364)||(40258903-40258998)
chr1 (300-350)||(7918212-7918262)
chr1 (301-363)||(17754306-17754368)
chr1 (300-358)||(20157351-20157409)
chr1 (295-357)||(28674801-28674863)
chr1 (300-357)||(6427351-6427408)
chr1 (301-358)||(13997883-13997940)
chr1 (305-358)||(17831537-17831590)
chr1 (269-350)||(22515857-22515938)
chr1 (300-360)||(1486710-1486770)
chr1 (290-346)||(23636040-23636096)
chr1 (300-348)||(25361896-25361944)
chr1 (295-355)||(52903252-52903312)
chr1 (295-350)||(14332638-14332693)
chr1 (311-350)||(15641042-15641081)
chr1 (307-358)||(25098563-25098614)
chr1 (300-359)||(25272481-25272540)
chr1 (295-358)||(39953142-39953205)
chr1 (302-357)||(42325561-42325616)
chr1 (300-350)||(9828052-9828102)
chr1 (301-350)||(10233261-10233310)
chr1 (277-358)||(19637768-19637849)
chr1 (305-362)||(24176373-24176430)
chr1 (301-358)||(26238115-26238171)
chr1 (295-340)||(30749858-30749903)
chr1 (295-340)||(30771309-30771354)
chr1 (306-358)||(398772-398824)
chr1 (307-363)||(17425101-17425157)
chr1 (289-349)||(18337338-18337398)
chr1 (308-348)||(19324572-19324612)
chr1 (298-350)||(19562620-19562672)
chr1 (278-354)||(22907318-22907394)
chr1 (295-350)||(25452146-25452199)
chr1 (299-355)||(27471566-27471622)
[»] chr3 (25 HSPs)
chr3 (295-365)||(7928443-7928513)
chr3 (278-358)||(25093502-25093582)
chr3 (285-348)||(8789536-8789599)
chr3 (289-364)||(11251972-11252045)
chr3 (307-363)||(16192758-16192814)
chr3 (306-358)||(32804547-32804599)
chr3 (286-364)||(3618875-3618951)
chr3 (295-358)||(8383257-8383320)
chr3 (295-350)||(20691327-20691382)
chr3 (300-358)||(26290371-26290429)
chr3 (300-365)||(7614416-7614481)
chr3 (300-357)||(8039836-8039893)
chr3 (295-364)||(51206349-51206418)
chr3 (270-350)||(45451561-45451641)
chr3 (295-355)||(49505150-49505210)
chr3 (294-357)||(4201397-4201460)
chr3 (295-358)||(8842330-8842392)
chr3 (303-358)||(10690266-10690321)
chr3 (299-358)||(13620764-13620823)
chr3 (305-360)||(34307786-34307841)
chr3 (307-365)||(11313808-11313866)
chr3 (300-350)||(18426957-18427007)
chr3 (277-358)||(40993313-40993395)
chr3 (300-364)||(1509533-1509597)
chr3 (305-353)||(11658820-11658868)
[»] scaffold0022 (1 HSPs)
scaffold0022 (269-357)||(90844-90932)
[»] scaffold0020 (1 HSPs)
scaffold0020 (300-363)||(135313-135376)
[»] chr4 (20 HSPs)
chr4 (299-358)||(5775358-5775417)
chr4 (308-358)||(22440609-22440659)
chr4 (240-363)||(23861371-23861495)
chr4 (299-348)||(18576037-18576086)
chr4 (289-349)||(9996849-9996909)
chr4 (309-356)||(903924-903971)
chr4 (295-358)||(8423714-8423777)
chr4 (299-357)||(6863154-6863212)
chr4 (300-350)||(15659761-15659811)
chr4 (304-358)||(40613450-40613504)
chr4 (299-358)||(11931280-11931339)
chr4 (302-357)||(16189710-16189765)
chr4 (295-350)||(33950144-33950199)
chr4 (307-350)||(36635332-36635375)
chr4 (295-350)||(54580019-54580074)
chr4 (300-350)||(4672086-4672136)
chr4 (311-357)||(30522927-30522973)
chr4 (300-360)||(21720508-21720568)
chr4 (278-350)||(28964227-28964299)
chr4 (300-356)||(30982879-30982935)
[»] scaffold0697 (1 HSPs)
scaffold0697 (269-358)||(1644-1733)
[»] scaffold0168 (1 HSPs)
scaffold0168 (303-360)||(21041-21098)
[»] scaffold0123 (1 HSPs)
scaffold0123 (303-360)||(44529-44586)
[»] scaffold1528 (1 HSPs)
scaffold1528 (301-363)||(1030-1092)
[»] scaffold0036 (1 HSPs)
scaffold0036 (300-350)||(9748-9798)
[»] scaffold0110 (1 HSPs)
scaffold0110 (301-358)||(28850-28907)
[»] scaffold0018 (1 HSPs)
scaffold0018 (317-358)||(192267-192308)
[»] scaffold0236 (1 HSPs)
scaffold0236 (300-359)||(25769-25828)
[»] scaffold0050 (1 HSPs)
scaffold0050 (295-358)||(70278-70341)
[»] scaffold0044 (1 HSPs)
scaffold0044 (302-349)||(53189-53236)
[»] scaffold0049 (1 HSPs)
scaffold0049 (295-357)||(63774-63836)


Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 4611887 - 4611674
Alignment:
Q  18 aaaggaacatatgtaaatatcttatagtgtcattatcgttggattcgttgcaacttgatgctatcacatttcacgcaattttgagttattcttccaactt 117  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4611887 aaaggaacatatgtaaatatcttatagtgtcataatcgttggattcgttgcaacttgatgctatcacatttcacgcaattttgagttattcttccaactt 4611788  T
Q  118 gaagatgatcactagctagctagcttgtagttactgccaatccatcacacaattagctggcaatatcaatagtaaattagtggcaagattgtgtttggcc 217  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4611787 gaagatgatcactagctagctagcttgtggttactgccaagccatcacacaattagctggcaatatcaatagtaaattagtggcaagattgtgtttggcc 4611688  T
Q  218 aacttggttcggtt 231  Q
    ||||| ||||||||    
T  4611687 aacttagttcggtt 4611674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 34897148 - 34897085
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||| |||| ||||||||||| |||||| |||| |||||||||||||||||||||| |||||||    
T  34897148 tgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtc 34897085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 4786339 - 4786397
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||||||||| |||||| |||| |||||||||||| |||||||||| ||||||    
T  4786339 gacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtc 4786397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 363
Target Start/End: Complemental strand, 11803316 - 11803254
Alignment:
Q  301 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 363  Q
    ||||| ||||||||| |||||| |||| |||||||||||| ||||||||||| ||||||||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtcagtgt 11803254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 11927087 - 11927145
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||||||||| |||||| |||| |||||||||| ||||||||||||| |||||    
T  11927087 gacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtc 11927145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 441
Target Start/End: Complemental strand, 4611501 - 4611449
Alignment:
Q  389 tctgtccgtattcgtgtttcatagacccaaaccaaacgttttggcttgctttg 441  Q
    |||||| |||| |||| |||| |||||||||||||||||||||||||||||||    
T  4611501 tctgtctgtatccgtgcttcaaagacccaaaccaaacgttttggcttgctttg 4611449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 12606825 - 12606880
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||||||||||||||| |||||  |||| || |||||||||||||||||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattttctcaaattatta 12606880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 13844592 - 13844647
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||| |||||||||||||||| ||||||  ||| ||||||||||||||||||||||    
T  13844592 tgtccgacaccgacacatataattacactcaattatgtgattttctcaaattatta 13844647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 350
Target Start/End: Complemental strand, 14134758 - 14134707
Alignment:
Q  299 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||||| ||||| |||||| |||| ||||||||||||||||||||||    
T  14134758 tgacaccgacatatataattacactgaattatgtgattttctcaaattatta 14134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 31109514 - 31109577
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||| ||||| |||||||||||||| || ||||  | |||||||||||||||||||||||||||    
T  31109514 tgtccgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtc 31109577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 11944723 - 11944665
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||||||||| |||||| || | |||||||||| ||||||||||||| |||||    
T  11944723 gacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtc 11944665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 20679392 - 20679446
Alignment:
Q  296 gtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||||||||| |||| |||||| |||  ||||||||||||||||||||||    
T  20679392 gtctgacaccgacacttataattacactgaactatgtgattttctcaaattatta 20679446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 363
Target Start/End: Complemental strand, 4611590 - 4611529
Alignment:
Q  302 caccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 363  Q
    |||||| ||||||| |||||| |||| |||| ||||||||||||||||| ||||||| ||||    
T  4611590 caccgagacatataattacactgaattatgttattttctcaaattattagcggtgtcggtgt 4611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 25566899 - 25566834
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtct 365  Q
    ||||||||||| | || |||||| |||| |||||||||| ||||||||||| | ||||||||||||    
T  25566899 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagtgtct 25566834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 31557085 - 31556997
Alignment:
Q  269 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||| ||||||||||  |||||  ||||||||||||| || | || |||||| |||| |||||||||| ||||||||||||| |||||    
T  31557085 cgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgatttt-tcaaattattaactgtgtc 31556997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 33405380 - 33405437
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaac 352  Q
    |||| |||||||||||||||| ||||||  ||| ||||| ||||||||||||||||||    
T  33405380 tgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattattaac 33405437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 24362209 - 24362261
Alignment:
Q  306 gacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||| |||||| |||| |||||||| ||||||||||||| |||||||    
T  24362209 gacacatataattacactgaattatgtgattctctcaaattattagcggtgtc 24362261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 360
Target Start/End: Complemental strand, 24669491 - 24669431
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 360  Q
    ||||||||||| | || |||||| |||| |||| |||| ||||||||||||||||||||||    
T  24669491 gacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcag 24669431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 350
Target Start/End: Original strand, 31236580 - 31236628
Alignment:
Q  302 caccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||||||||||| |||||  |||| ||||||||||||||||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattatta 31236628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 358
Target Start/End: Original strand, 39954282 - 39954338
Alignment:
Q  302 caccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||| |||||||| ||||||  ||| |||||||||||||||||||||| |||||||    
T  39954282 caccgtcacatataattacactaaattatgtgattttctcaaattattagcggtgtc 39954338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 350
Target Start/End: Complemental strand, 3025614 - 3025559
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||| ||||| ||||| |||| |||||| |||| ||||||||||||||||||||||    
T  3025614 tgtccgacactgacacctataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 358
Target Start/End: Original strand, 28384994 - 28385053
Alignment:
Q  299 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||||||||||||||| |||||| |||| ||| |||||  ||| |||||||||||||||    
T  28384994 tgacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtc 28385053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 350
Target Start/End: Original strand, 29447110 - 29447161
Alignment:
Q  299 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||||||||| | ||||||||  |||| ||||||||||||||||||||||    
T  29447110 tgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 29447161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 357
Target Start/End: Original strand, 33382019 - 33382077
Alignment:
Q  299 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    ||||||||||||||||| |||| | |||| |||| ||||||| ||||||||| ||||||    
T  33382019 tgacaccgacacatataattactctgaattatgtcattttcttaaattattatcggtgt 33382077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 7658520 - 7658471
Alignment:
Q  301 acaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||| ||||| |||||| |||| |||| |||||||||||||||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaattatta 7658471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 14731763 - 14731706
Alignment:
Q  307 acacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    ||||||||| ||||||  ||| |||||||||||||||||||||| | ||||| |||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattagcagtgtctgtgtc 14731706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 358
Target Start/End: Original strand, 26714050 - 26714143
Alignment:
Q  263 attaaacgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtga-ttttctcaaattattaacggtgtc 358  Q
    ||||||||||| || |||||| ||||||||  |||| |||||||||||  ||| ||||||||| | |||||| |||||||| ||||||| |||||||    
T  26714050 attaaacgtgttttagtgtcgtatgtgtgtcgtgtccgacaccgacac--ataattacaccgagt-atgtgatttttctcacattattagcggtgtc 26714143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 38079062 - 38079009
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattat 348  Q
    |||| |||| |||| |||||| |||||| ||||||||||||||||| |||||||    
T  38079062 tgtccgacatcgacgcatataattacactgaatcatgtgattttcttaaattat 38079009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 41831946 - 41831999
Alignment:
Q  305 cgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||| | ||||||||| |||| |||||||||| ||||||||||||| |||||    
T  41831946 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 41831999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 18067954 - 18067994
Alignment:
Q  319 acaccgaatcatgtgattttctcaaattattaacggtgtca 359  Q
    |||| |||| |||||||||||||||||||||| ||||||||    
T  18067954 acactgaattatgtgattttctcaaattattagcggtgtca 18067994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 340
Target Start/End: Original strand, 26902176 - 26902216
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttct 340  Q
    |||||||||||||||| |||||| |||| ||||||||||||    
T  26902176 gacaccgacacatataattacactgaattatgtgattttct 26902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 40332248 - 40332200
Alignment:
Q  301 acaccgacacatatagttacaccgaatcatgtgattttctcaaattatt 349  Q
    |||||||||| | || |||||| |||| |||||||||||||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 263 - 358
Target Start/End: Original strand, 28588638 - 28588733
Alignment:
Q  263 attaaacgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||| |||||| ||||||| ||| |||||  |||| ||||||||||| |||| |||||| |||| |||||||||||||||||||||| |||||||    
T  28588638 attaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtc 28588733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 6471890 - 6471954
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    |||||| ||||||||| |||||| |||| |||||||||||||||||||||| | |||||||||||    
T  6471890 gacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgtcagtgtc 6471954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 357
Target Start/End: Original strand, 30502367 - 30502446
Alignment:
Q  278 gtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    ||||||||  |||||  |||| |||||||||||||||| |||||| |||| | |||||||||||||||||||| ||||||    
T  30502367 gtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 357
Target Start/End: Original strand, 30542710 - 30542789
Alignment:
Q  278 gtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    ||||||||  |||||  |||| |||||||||||||||| |||||| |||| | |||||||||||||||||||| ||||||    
T  30542710 gtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 3966561 - 3966503
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||||||||| |||||| ||||  ||||||||||||||||||||| |||||||    
T  3966561 gacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtc 3966503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 365
Target Start/End: Original strand, 24273039 - 24273096
Alignment:
Q  308 cacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtct 365  Q
    |||||||| |||||| |||| ||||||||||||||||||| |||| ||||||||||||    
T  24273039 cacatataattacactgaattatgtgattttctcaaattaataactgtgtcagtgtct 24273096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 365
Target Start/End: Complemental strand, 24389175 - 24389118
Alignment:
Q  308 cacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtct 365  Q
    |||||||| |||||| |||| ||||||||||||||||||| |||| ||||||||||||    
T  24389175 cacatataattacactgaattatgtgattttctcaaattaataactgtgtcagtgtct 24389118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 363
Target Start/End: Complemental strand, 42893449 - 42893355
Alignment:
Q  269 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 363  Q
    |||||| ||||||||||   ||||| |||||||||||||||| | || |||||| | || |||||||||| ||||||||||| | ||||| ||||    
T  42893449 cgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgt 42893355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 36838601 - 36838544
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||||||||||||||| ||||||  ||| |||| ||||||||||||||||| ||||||    
T  36838601 gacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 7175026 - 7175078
Alignment:
Q  306 gacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||| |||  || ||| ||||||||||||||||||||||||||||||    
T  7175026 gacacatataattatgccaaattatgtgattttctcaaattattaacggtgtc 7175078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 41091258 - 41091322
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    |||| ||||||||||| |||||| |||| ||||||||||||||||| |||| | ||||| |||||    
T  41091258 gacatcgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtccgtgtc 41091322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 357
Target Start/End: Original strand, 12264836 - 12264887
Alignment:
Q  306 gacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||||||||| |||||| ||||||||| |||||||||||| |||| ||||||    
T  12264836 gacacatataattacactgaatcatgtaattttctcaaataattagcggtgt 12264887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 16203791 - 16203846
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||| |||||||||||||||| ||||||  ||| ||| ||||||||||||||||||    
T  16203791 tgtccgacaccgacacatataattacactaaattatgagattttctcaaattatta 16203846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 360
Target Start/End: Original strand, 23015995 - 23016050
Alignment:
Q  305 cgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 360  Q
    |||||| |||| |||||| |||| ||||||||||||||||| ||||||| ||||||    
T  23015995 cgacacctataattacactgaattatgtgattttctcaaatgattaacgatgtcag 23016050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 2436980 - 2436922
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||||||||| | ||| ||||| ||||||||||  |||||||||| |||||||    
T  2436980 gacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtc 2436922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 11685997 - 11685939
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||||||||| ||||||  ||| ||| || ||||||||||||||| |||||||    
T  11685997 gacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtc 11685939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 13287400 - 13287450
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||||| | ||||||||| |||| |||||||||| |||||||||||    
T  13287400 gacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 13287450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 39205938 - 39205888
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||| ||||||||| ||||||| ||| || |||||||||||||||||||    
T  39205938 gacaccaacacatataattacacctaattatatgattttctcaaattatta 39205888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 14873576 - 14873527
Alignment:
Q  299 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattat 348  Q
    ||||||||||||||||| ||||||  ||| ||||| ||||||||||||||    
T  14873576 tgacaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 18421837 - 18421890
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattat 348  Q
    |||| ||| |||||||||||| |||||| | || ||||||||||||||||||||    
T  18421837 tgtccgacgccgacacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 21191046 - 21191107
Alignment:
Q  289 gtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||| |||| ||||||||||| | || |||||| |||| |||||||||| |||||||||||    
T  21191046 gtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 21191107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 9449521 - 9449477
Alignment:
Q  306 gacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||| |||||||||  |||| ||||||||||||||||||||||    
T  9449521 gacacaaatagttacattgaattatgtgattttctcaaattatta 9449477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 12927717 - 12927649
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 363  Q
    |||||||||| |||| ||||| ||||||  ||| || ||||||||||||||||||| || |||| ||||    
T  12927717 tgtctgacactgacatatataattacactaaattatatgattttctcaaattattagcgatgtcggtgt 12927649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 19746717 - 19746757
Alignment:
Q  324 gaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    |||| |||| ||||||||||||||||| |||||||||||||    
T  19746717 gaattatgtaattttctcaaattattagcggtgtcagtgtc 19746757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 26609408 - 26609348
Alignment:
Q  303 accgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 363  Q
    ||||||||| |||||| |||  |||||||||||||| |||||||||||  |||||| ||||    
T  26609408 accgacacaaatagttgcactaaatcatgtgattttatcaaattattagtggtgtcggtgt 26609348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 27144515 - 27144463
Alignment:
Q  306 gacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||| ||||||  ||| ||||||||| |||||||||||| |||||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattattagcggtgtc 27144463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 355
Target Start/End: Complemental strand, 30098381 - 30098329
Alignment:
Q  303 accgacacatatagttacaccgaatcatgtgattttctcaaattattaacggt 355  Q
    |||||||  |||| |||||  |||| |||||||||||||||||||||||||||    
T  30098381 accgacatctataattacattgaattatgtgattttctcaaattattaacggt 30098329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 32630736 - 32630796
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 360  Q
    ||||| |||||||||| |||||  |||| || | ||||||||||||||||| |||||||||    
T  32630736 gacactgacacatataattacattgaattatataattttctcaaattattatcggtgtcag 32630796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 1433512 - 1433454
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  1433512 gacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtc 1433454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 363
Target Start/End: Complemental strand, 20549870 - 20549786
Alignment:
Q  279 tgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 363  Q
    |||||||  |||||| |||| |||||||||||||||| |||||| |||| | |||||||||||||||||||| ||||||| ||||    
T  20549870 tgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgt 20549786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 302 - 356
Target Start/End: Original strand, 2425736 - 2425790
Alignment:
Q  302 caccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtg 356  Q
    ||||||||||||||||| |||  ||| ||||||||||||||||||||||||||||    
T  2425736 caccgacacatatagttccacttaattatgtgattttctcaaattattaacggtg 2425790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 22602711 - 22602769
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||| ||| ||||||||    
T  22602711 gacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtc 22602769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 350
Target Start/End: Complemental strand, 5835310 - 5835255
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||||||||||||||| |||||| |||| |||| ||||||||||| |||||    
T  5835310 tgtctgacaccgacacatataattacactgaattatgttattttctcaaactatta 5835255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 28155633 - 28155570
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||| ||||||||||| | || ||||||||||| |||| ||||||||||||||||| |||||||    
T  28155633 tgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtc 28155570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 32287459 - 32287522
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||| |||||||||||||||| || ||| |||| |||||||||||||| ||||||| |||||||    
T  32287459 tgtccgacaccgacacatatacttgcactgaattatgtgattttctcagattattagcggtgtc 32287522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 19206108 - 19206050
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||||||||| ||| |  |||| |||||||||||||||||||||| |||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtc 19206050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 32308178 - 32308120
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||| |||||||| | |||||| |||| |||||||||||||||||||||| |||||||    
T  32308178 gacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtc 32308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 350
Target Start/End: Complemental strand, 21880241 - 21880160
Alignment:
Q  269 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||| ||||||||||  |||||  |||| ||||||||||| | || |||||| |||| |||| |||||||||||||||||    
T  21880241 cgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattatta 21880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 9482992 - 9482944
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattat 348  Q
    |||||||||||||||| |||||| ||||  |||||||||||||||||||    
T  9482992 gacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 16341554 - 16341490
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    ||||||| |||||||| ||||||  ||| |||||||||||||||||||||| | ||||| |||||    
T  16341554 gacaccggcacatataattacacttaattatgtgattttctcaaattattatcagtgtccgtgtc 16341490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 27732243 - 27732299
Alignment:
Q  303 accgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtca 359  Q
    ||||||||||||| |||||| |||| |||| ||||||| |||||||||||| |||||    
T  27732243 accgacacatataattacactgaattatgtaattttcttaaattattaacgttgtca 27732299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 350
Target Start/End: Complemental strand, 3721156 - 3721101
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||| |||||||||||||||| ||| ||  ||| ||||||||||||||||||||||    
T  3721156 tgtccgacaccgacacatataattatactaaattatgtgattttctcaaattatta 3721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 22484088 - 22484025
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||||||||||||||||||| ||| || |||| |||  ||||||| ||||||||| |||||||    
T  22484088 tgtctgacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtc 22484025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 23191959 - 23191896
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||| || |||| || |||||| |||  |||||||||||||||||||||| |||||||    
T  23191959 tgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtc 23191896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 26733367 - 26733304
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||| ||||||||||||| || ||| || |||| |||||||||| ||||||||||| |||||||    
T  26733367 tgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtc 26733304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 27093409 - 27093472
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||| |||||||| |||||| ||||||  ||| |||||||||||| ||||||||| |||||||    
T  27093409 tgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtc 27093472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 27184892 - 27184829
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||| |||||||| |||||| ||||||  ||| |||||||||||| ||||||||| |||||||    
T  27184892 tgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtc 27184829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 350
Target Start/End: Complemental strand, 37870956 - 37870901
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||| |||||||||||| ||| ||||||  ||||||||||||||||||||| ||||    
T  37870956 tgtccgacaccgacacacataattacacgaaatcatgtgattttctcaaatgatta 37870901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 360
Target Start/End: Original strand, 3520345 - 3520403
Alignment:
Q  302 caccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 360  Q
    |||||||||||||| |||||  |||| || |||||||||||||| |||| |||||||||    
T  3520345 caccgacacatataattacattgaattatatgattttctcaaatgattatcggtgtcag 3520403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 5548734 - 5548676
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||| |||||||||| |||||| |||| || ||||||||||||||||| | |||||||    
T  5548734 gacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtc 5548676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 7328692 - 7328742
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||||||||||||| ||||||  ||| |||| |||||||||||||||||    
T  7328692 gacaccgacacatataattacactaaattatgttattttctcaaattatta 7328742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 355
Target Start/End: Complemental strand, 17851488 - 17851434
Alignment:
Q  301 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggt 355  Q
    |||| |||||||||| |||||| |||| |||||||||||| ||||||||| ||||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaattattagcggt 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 19992059 - 19992009
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||||| |||| |||||| |||  ||||||||||||||||||||||    
T  19992059 gacaccgacacttataattacactgaaatatgtgattttctcaaattatta 19992009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 350
Target Start/End: Complemental strand, 22868112 - 22868050
Alignment:
Q  288 tgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||| ||| ||| || |||||||||| |||||| |||| |||||||||||||| |||||||    
T  22868112 tgtgttgtgtttgatactgacacatataattacactgaattatgtgattttctcatattatta 22868050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 358
Target Start/End: Original strand, 26329387 - 26329441
Alignment:
Q  304 ccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||||| |||||| ||||  |||| ||||||||||||||||||| ||||    
T  26329387 ccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtc 26329441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 8160467 - 8160410
Alignment:
Q  307 acacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    ||||||||| ||||||  ||| |||| ||||||| ||||||||| |||||||||||||    
T  8160467 acacatataattacactaaattatgtaattttcttaaattattagcggtgtcagtgtc 8160410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 15902879 - 15902830
Alignment:
Q  301 acaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||||||||| ||||||  ||| |||||||||| |||||||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 358
Target Start/End: Original strand, 29787387 - 29787428
Alignment:
Q  317 ttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||| |||| |||||||||||||||||||||| |||||||    
T  29787387 ttacactgaattatgtgattttctcaaattattagcggtgtc 29787428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 359
Target Start/End: Original strand, 42720881 - 42720950
Alignment:
Q  290 tgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtca 359  Q
    |||| |||| ||||| |||||||||| |||||   ||| |||||||||| ||||||||||| ||||||||    
T  42720881 tgttgtgtcagacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgtca 42720950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 640174 - 640134
Alignment:
Q  297 tctgacaccgacacatatagttacaccgaatcatgtgattt 337  Q
    ||||||||||||||||||| |||||| |||| |||||||||    
T  640174 tctgacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 360
Target Start/End: Complemental strand, 11700837 - 11700801
Alignment:
Q  324 gaatcatgtgattttctcaaattattaacggtgtcag 360  Q
    |||| |||||||||| |||||||||||||||||||||    
T  11700837 gaattatgtgattttgtcaaattattaacggtgtcag 11700801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 38134410 - 38134466
Alignment:
Q  303 accgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtca 359  Q
    ||||||||||||  |||||  |||| |||| ||||||||||||||||| ||||||||    
T  38134410 accgacacatatgattacattgaattatgtcattttctcaaattattatcggtgtca 38134466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 351
Target Start/End: Complemental strand, 38143286 - 38143230
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaa 351  Q
    ||||||||||| ||||||||| |||||   ||| |||||||||| ||||||||||||    
T  38143286 tgtctgacaccaacacatataattacattaaattatgtgattttttcaaattattaa 38143230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 357
Target Start/End: Original strand, 7265571 - 7265651
Alignment:
Q  277 ggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||||||||  ||| || |||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| ||||||    
T  7265571 ggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgt 7265651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 5732506 - 5732569
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||| |||||||||||||||| ||||||  ||  ||||||||||||||||||||||||||||||    
T  5732506 tgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtc 5732569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 19040415 - 19040352
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||| ||||| |||||||||| |||||| |||| |||||||||||||||||||||| |||||||    
T  19040415 tgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtc 19040352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 358
Target Start/End: Complemental strand, 7378096 - 7377979
Alignment:
Q  240 atgaagcacgaacactctttcaaattaaacgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttc 339  Q
    |||||||||| ||||| | ||| ||||  ||||||  |||||||||||  |||  |||| |||||||||||||||| |||||  |||| |||||||||||    
T  7378096 atgaagcacggacact-tctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatgtgattttc 7377998  T
Q  340 tcaaattattaacggtgtc 358  Q
    ||||||| ||| |||||||    
T  7377997 tcaaatttttagcggtgtc 7377979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 9025495 - 9025545
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  9025495 gacaccgacacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 9027236 - 9027178
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||||||||| |||||| |||| |||||||| ||||||||||||| |||||||    
T  9027236 gacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtc 9027178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 5462733 - 5462680
Alignment:
Q  311 atatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    ||||| |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  5462733 atataattacaatgaattatgtgattttctcaaattattaacggtgtcagtgtc 5462680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 13360363 - 13360420
Alignment:
Q  290 tgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaatta 347  Q
    |||| ||||||||||||| ||||||| |||||| |||| |||||||||||||||||||    
T  13360363 tgttgtgtctgacaccgaaacatataattacactgaattatgtgattttctcaaatta 13360420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 5000554 - 5000625
Alignment:
Q  237 tcaatgaagcacgaacactctttcaaattaaacgtgtcttggtgtcggatgtgtgttctgtctgacaccgaca 309  Q
    |||||||||||||||||||||| |  |||| ||||||| ||||||||||| |||||  |||||||||||||||    
T  5000554 tcaatgaagcacgaacactctt-cggattagacgtgtcctggtgtcggatatgtgtcgtgtctgacaccgaca 5000625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 355
Target Start/End: Complemental strand, 9617492 - 9617437
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggt 355  Q
    |||||||||||||||| |||||  |||| |||||||||||||||||||||| ||||    
T  9617492 gacaccgacacatataattacattgaattatgtgattttctcaaattattaccggt 9617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 9658942 - 9658879
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||| ||||||||| ||||| |||||| |||| |||||||||||| ||||||||| |||||||    
T  9658942 tgtctaacaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtc 9658879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 350
Target Start/End: Original strand, 11784216 - 11784267
Alignment:
Q  299 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||||| ||||| |||||| || ||||||||||||||||||||||||    
T  11784216 tgacaccgacatatataattacactgattcatgtgattttctcaaattatta 11784267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 357
Target Start/End: Original strand, 31579223 - 31579283
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||| ||||||||||||||   |||||| |||| |||||||||||||||||||||||||||||    
T  31579223 tgtccgacaccgacacataa--ttacactgaattatgtgattttctcaaattattaacggtgt 31579283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 9629441 - 9629383
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||||||||| |||||  |||| |||||||||||||||||||||  |||||||    
T  9629441 gacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtc 9629383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 7086852 - 7086803
Alignment:
Q  301 acaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||||||||| ||||||  ||| ||||||||||||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattatta 7086803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 304 - 357
Target Start/End: Original strand, 30866149 - 30866202
Alignment:
Q  304 ccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||||||||||| |||||  |||| |||||||||||||||||||||| ||||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 17341671 - 17341723
Alignment:
Q  306 gacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||| |||| |||||| |||| |||||||||| |||||||||||||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtc 17341723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 32320670 - 32320730
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 360  Q
    |||||||| ||||||| | |||  |||| |||||||||| |||||||||||||||||||||    
T  32320670 gacaccgatacatataatgacattgaattatgtgattttatcaaattattaacggtgtcag 32320730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 32511667 - 32511727
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 360  Q
    |||||| |||| |||| |||||| |||| |||||||||||| ||||||||| |||||||||    
T  32511667 gacaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgtcag 32511727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 13851799 - 13851736
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||| |||| ||||||||||| |||||| |||| | || ||||||||||||||||| |||||||    
T  13851799 tgtcagacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtc 13851736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 350
Target Start/End: Complemental strand, 19044523 - 19044472
Alignment:
Q  299 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||||||||||| | |||| |||| ||||||| ||||||||||||||    
T  19044523 tgacaccgacacatataataacactgaattatgtgatattctcaaattatta 19044472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 21924931 - 21924986
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||| |||||||||||||||| |||||| |||| || |||| ||||||||||||||    
T  21924931 tgtccgacaccgacacatataattacactgaattatttgatattctcaaattatta 21924986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 7996379 - 7996429
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||| |||||| |||||| |||| || |||||||||||||||||||    
T  7996379 gacaccgacgcatataattacactgaattatatgattttctcaaattatta 7996429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 8022422 - 8022372
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||| |||||| |||||| |||| || |||||||||||||||||||    
T  8022422 gacaccgacgcatataattacactgaattatatgattttctcaaattatta 8022372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 9195755 - 9195805
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||||||||||||| ||||||  ||| |||| |||||||||||||||||    
T  9195755 gacaccgacacatataattacactaaattatgtcattttctcaaattatta 9195805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 20371111 - 20371169
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||||||||| | |||  || | |||||||||||||||||||||| |||||||    
T  20371111 gacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtc 20371169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 346
Target Start/End: Complemental strand, 26562747 - 26562701
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaatt 346  Q
    |||| ||||||||||| |||||| |||| ||||||||||||||||||    
T  26562747 gacatcgacacatataattacactgaattatgtgattttctcaaatt 26562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 34073348 - 34073398
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||| |||||| |||||| |||| ||| ||||||||||||||||||    
T  34073348 gacaccgacccatataattacactgaattatgagattttctcaaattatta 34073398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 346
Target Start/End: Original strand, 11591876 - 11591917
Alignment:
Q  305 cgacacatatagttacaccgaatcatgtgattttctcaaatt 346  Q
    ||||||||||| |||||| |||| ||||||||||||||||||    
T  11591876 cgacacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 14155240 - 14155305
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtct 365  Q
    |||||| |||||| || | |||| | || |||||||||||||||||||| | ||||||||||||||    
T  14155240 gacaccaacacatgtaatcacactgtattatgtgattttctcaaattatgatcggtgtcagtgtct 14155305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 28715358 - 28715289
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    |||| ||||||||||| | || |||||| |||| |||| ||||| ||||||||||| | |||||||||||    
T  28715358 tgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgtcagtgtc 28715289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 350
Target Start/End: Complemental strand, 16833396 - 16833316
Alignment:
Q  270 gtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||| |||||||||| | ||||  ||||| |||||||||| | || |||||| |||  |||||||||| |||||||||||    
T  16833396 gtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgattttttcaaattatta 16833316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 17327656 - 17327700
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaa 344  Q
    ||||| |||||||||||||||||  ||| ||||||||||||||||    
T  17327656 gacactgacacatatagttacactaaattatgtgattttctcaaa 17327700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 44860378 - 44860314
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    |||||||||||||||| |||||| |||| ||| |||||||||||||||||| |||||||||||||    
T  44860378 gacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtcagtgtc 44860314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 350
Target Start/End: Complemental strand, 5367270 - 5367200
Alignment:
Q  280 gtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||| |||||  |||| |||||||||||||||| |||||| |||| ||||||||| ||||||||||||    
T  5367270 gtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 358
Target Start/End: Complemental strand, 18276582 - 18276521
Alignment:
Q  297 tctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||||||||||||| ||| |||||| |||| | |||||||||||||||||||| |||||||    
T  18276582 tctgacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtc 18276521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 363
Target Start/End: Complemental strand, 23718082 - 23718021
Alignment:
Q  302 caccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 363  Q
    |||||||||||||| |||||| |||| |||||| ||||||||||||||| ||||||| ||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgt 23718021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 363
Target Start/End: Complemental strand, 24105754 - 24105693
Alignment:
Q  302 caccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 363  Q
    |||||||||||||| |||||| |||| |||||| ||||||||||||||| ||||||| ||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgt 24105693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 39279732 - 39279676
Alignment:
Q  301 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    ||||||||||||||| |||||| |||| || ||||||||||| ||||||||||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctcatattattaacggtgt 39279676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 21616813 - 21616762
Alignment:
Q  307 acacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||||||| |||||| |||| |||||||||||||||||||||| |||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtc 21616762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 357
Target Start/End: Complemental strand, 31018653 - 31018591
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||| ||||||||||| |||| ||||||  |||||||||||||||| ||||||||| ||||||    
T  31018653 tgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgt 31018591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 37411245 - 37411303
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||| ||||||||||| | |||| |||| |||||||||||||||||||||| |||||||    
T  37411245 gacatcgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtc 37411303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 34691801 - 34691861
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggt 355  Q
    |||| |||||||||||||||| |||||| |||| || ||||||| ||||||||||| ||||    
T  34691801 tgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 34714213 - 34714273
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggt 355  Q
    |||| |||||||||||||||| |||||| |||| || ||||||| ||||||||||| ||||    
T  34714213 tgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 350
Target Start/End: Complemental strand, 5473391 - 5473336
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||| ||||||||||||||   ||||||||||| |||||||||| |||||||||||    
T  5473391 tgtccgacaccgacacataatattacaccgaattatgtgattttttcaaattatta 5473336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 20242717 - 20242768
Alignment:
Q  289 gtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttct 340  Q
    ||||| |||| |||||||||||||||| |||||| |||| ||||||||||||    
T  20242717 gtgttgtgtccgacaccgacacatataattacactgaattatgtgattttct 20242768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 358
Target Start/End: Original strand, 30404822 - 30404909
Alignment:
Q  271 tgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||| ||||||||||  |||||  |||| ||| ||||||| | || |||||| |||| |||||||||| ||||||||||||| |||||    
T  30404822 tgtcctggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtc 30404909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 350
Target Start/End: Complemental strand, 30471093 - 30471046
Alignment:
Q  303 accgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  30471093 accgacacatataattacatcgaattatgtgattttctcaaaatatta 30471046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 357
Target Start/End: Complemental strand, 35449565 - 35449514
Alignment:
Q  306 gacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||||||||| |||||| ||||  ||||||||||||||||||||||| ||||    
T  35449565 gacacatataattacactgaattctgtgattttctcaaattattaacagtgt 35449514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 42832277 - 42832340
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 363  Q
    ||||||||||| |||| |||||| |||  |||| ||||||||||||||||| ||||||| ||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtcggtgt 42832340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 2331850 - 2331795
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||||||||||||| |  ||||| |||| ||||||||||||||||||||||| |||||    
T  2331850 gacaccgacacataaa--tacactgaattatgtgattttctcaaattattaatggtgt 2331795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 18889592 - 18889642
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||||||||||||  |||||| |||| ||||||||||||||| ||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttctcaatttatta 18889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 24975326 - 24975384
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||||||| |||||| |||||| |||| ||  |||||||||||||||||| |||||||    
T  24975326 gacaccgacgcatatatttacactgaattatacgattttctcaaattattagcggtgtc 24975384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 350
Target Start/End: Complemental strand, 25846787 - 25846749
Alignment:
Q  312 tatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  25846787 tataattacactgaatcatgtgattttctcaaattatta 25846749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 28677966 - 28677909
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||| ||||||| |||||| |||| |||||||||| ||||||||||| |||||||    
T  28677966 gacaccga-acatataattacactgaattatgtgattttttcaaattattagcggtgtc 28677909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 30527599 - 30527653
Alignment:
Q  303 accgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    ||||||||||||| ||||||  ||| || ||||||||||||||||||||| ||||    
T  30527599 accgacacatataattacactaaattatatgattttctcaaattattaacagtgt 30527653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 38355887 - 38355933
Alignment:
Q  299 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaat 345  Q
    ||||||||||||||||| | |||| |||| |||||||||||||||||    
T  38355887 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 38355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 350
Target Start/End: Complemental strand, 2415406 - 2415325
Alignment:
Q  269 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||| |||||||||  || ||  ||||| ||||| ||||||||||||||||  ||| || | |||||||||||||||||    
T  2415406 cgtgtctcggtgtcggacatgagtcgtgtctcacaccaacacatatagttacacttaattatataattttctcaaattatta 2415325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 357
Target Start/End: Complemental strand, 18571061 - 18570973
Alignment:
Q  269 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||||| ||||||||||| ||| |  |||  ||||| |||||||||  |||||  |||| |||| ||||||||||||||||| ||||||    
T  18571061 cgtgtcctggtgtcggatatgtatcgtgttcgacactgacacatatgattacattgaattatgtcattttctcaaattattatcggtgt 18570973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 22084850 - 22084890
Alignment:
Q  317 ttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||||| |||| || ||||||||||||||||||||||||||    
T  22084850 ttacactgaattatatgattttctcaaattattaacggtgt 22084890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 28412391 - 28412351
Alignment:
Q  317 ttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||||| |||| |||||||||| ||||||||||||||||||    
T  28412391 ttacactgaattatgtgattttatcaaattattaacggtgt 28412351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 7e-16; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 2896117 - 2896180
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||||||||||||| |||||| ||||| |||| |||||||||||||||||||||| |||||||    
T  2896117 tgtctgacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtc 2896180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 363
Target Start/End: Original strand, 1864882 - 1864944
Alignment:
Q  301 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 363  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||||||| ||||| ||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcggtgt 1864944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 357
Target Start/End: Complemental strand, 9709883 - 9709821
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||| |||||||||||||||| ||||| ||||| |||||||||||||||||||||| ||||||    
T  9709883 tgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgt 9709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 277 - 347
Target Start/End: Original strand, 43492472 - 43492542
Alignment:
Q  277 ggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaatta 347  Q
    |||||||||  |||||| ||||||||||||||||| ||| ||||||||||| | |||||||||||||||||    
T  43492472 ggtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaattacgtgattttctcaaatta 43492542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 34371771 - 34371708
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    |||||||||||||||| |||||| |||| ||||||||||||| |||||||| |||||||||||||    
T  34371771 gacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgtcagtgtc 34371708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 36878524 - 36878461
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||| ||||||||||| |||| |||||| |||| |||||||||||||||||||||| |||||||    
T  36878524 tgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtc 36878461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 364
Target Start/End: Complemental strand, 40181940 - 40181865
Alignment:
Q  289 gtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    ||||| |||| |||||||| ||||||| |||||| |||| |||||||||||||||||||||| | ||||| |||||    
T  40181940 gtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgtctgtgtc 40181865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 350
Target Start/End: Original strand, 10572591 - 10572640
Alignment:
Q  301 acaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||||||||| || ||||||||||| ||||||||||||||||||||||    
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattatta 10572640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 21530778 - 21530689
Alignment:
Q  269 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||| | ||||||||  |||||  |||| ||||||||||| |||| ||| ||| ||| || |||||||||||||||||||||||||||    
T  21530778 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtc 21530689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 29229520 - 29229455
Alignment:
Q  300 gacaccgacacatatagttac-accgaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    |||||||||||||||| |||| ||  |||||||||||||||||||||||||| | |||||||||||    
T  29229520 gacaccgacacatataattaccactaaatcatgtgattttctcaaattattagcagtgtcagtgtc 29229455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 5898262 - 5898334
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtctca 367  Q
    |||||||||||||| |||||| |||||| |||| |||||||||| ||| ||||||| ||||||| | ||||||    
T  5898262 tgtctgacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtcggcgtctca 5898334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 44482288 - 44482240
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattat 348  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  44482288 gacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 2784619 - 2784556
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||||||||||||||||||| ||| ||  ||| |||||||||||| ||||| |||||||||||    
T  2784619 tgtctgacaccgacacatataattatactcaattatgtgattttcttaaatttttaacggtgtc 2784556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 363
Target Start/End: Complemental strand, 38503378 - 38503315
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 363  Q
    |||||||||||||||| |||||| |||  || ||||||||||||||||||| ||||||| ||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgt 38503315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 364
Target Start/End: Original strand, 40258903 - 40258998
Alignment:
Q  269 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    |||||| ||||||||||   ||||  |||||||||||||||| | || |||||| |||| |||||||||| ||||||||||||  ||||| |||||    
T  40258903 cgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcggtgtc 40258998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 7918212 - 7918262
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||| |||||||||| |||||| |||| ||||||||||||||||||||||    
T  7918212 gacactgacacatataattacactgaattatgtgattttctcaaattatta 7918262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 363
Target Start/End: Complemental strand, 17754368 - 17754306
Alignment:
Q  301 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 363  Q
    |||| ||||||||||||||||| |||| |||| ||||| ||||||||||| ||||||| ||||    
T  17754368 acactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgt 17754306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 20157351 - 20157409
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||||||||  |||||| |||| |||||||||||||| ||||||| |||||||    
T  20157351 gacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtc 20157409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 357
Target Start/End: Complemental strand, 28674863 - 28674801
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    ||||||||||| ||| ||||| ||| || |||| |||| ||||||||||||||||||||||||    
T  28674863 tgtctgacaccaacatatataattatactgaattatgtaattttctcaaattattaacggtgt 28674801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 6427408 - 6427351
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||||| ||||||||| |||||  |||| |||||||||||||||||||||| ||||||    
T  6427408 gacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgt 6427351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 13997940 - 13997883
Alignment:
Q  301 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||||||||||||| |||||| |||| |||||||||| | |||| ||||||||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtc 13997883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 17831537 - 17831590
Alignment:
Q  305 cgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||||||||  |||||| |||| |||||||||||||||||||||| |||||||    
T  17831537 cgacacatatgattacactgaataatgtgattttctcaaattattagcggtgtc 17831590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 350
Target Start/End: Original strand, 22515857 - 22515938
Alignment:
Q  269 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||| |||||||||| |||||  |||| ||||||||||| | || ||||||  ||| |||||||||| |||||||||||    
T  22515857 cgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 22515938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 1486710 - 1486770
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 360  Q
    ||||||||||| |||| |||||| |||| |||||||||| ||||||||||| | |||||||    
T  1486710 gacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcag 1486770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 23636040 - 23636096
Alignment:
Q  290 tgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaatt 346  Q
    |||| ||||||||||||||||||| | |||||| |||| |||| |||||||||||||    
T  23636040 tgttgtgtctgacaccgacacatacaattacactgaattatgtaattttctcaaatt 23636096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 25361944 - 25361896
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattat 348  Q
    ||||| |||||||||| |||||| |||| ||||||||||||||||||||    
T  25361944 gacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 52903312 - 52903252
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggt 355  Q
    |||| |||||||||||||||| |||||| |||| || ||||||| | ||||||||||||||    
T  52903312 tgtccgacaccgacacatataattacactgaattatatgattttattaaattattaacggt 52903252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 14332638 - 14332693
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||| |||||||| ||||||| ||||||  ||| ||||||||||||||||||||||    
T  14332638 tgtccgacaccgagacatataattacactaaattatgtgattttctcaaattatta 14332693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 350
Target Start/End: Original strand, 15641042 - 15641081
Alignment:
Q  311 atatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  15641042 atatagttacactgaatcatgtgattttcttaaattatta 15641081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 25098563 - 25098614
Alignment:
Q  307 acacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||||||| |||||| |||| |||||||||||||||||||| | |||||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgtc 25098614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 25272540 - 25272481
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtca 359  Q
    ||||||||||| |||| ||||||  ||| |||||||||||||||||| ||||| ||||||    
T  25272540 gacaccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtca 25272481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 39953142 - 39953205
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||| |||||||||||||| | ||||||  ||| |||||||||||| ||||||||| |||||||    
T  39953142 tgtccgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtc 39953205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 42325616 - 42325561
Alignment:
Q  302 caccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||| |||||||| ||||||| |||| |||| ||||||||||||||||| ||||||    
T  42325616 caccaacacatattgttacactgaattatgtcattttctcaaattattatcggtgt 42325561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 9828102 - 9828052
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||||||||||| | |||||| |||| |||||||||| |||||||||||    
T  9828102 gacaccgacacataaaattacactgaattatgtgattttatcaaattatta 9828052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 10233310 - 10233261
Alignment:
Q  301 acaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||| |||||||||| |||||| |||| ||||||||||||||| ||||||    
T  10233310 acacagacacatataattacactgaattatgtgattttctcaatttatta 10233261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 358
Target Start/End: Complemental strand, 19637849 - 19637768
Alignment:
Q  277 ggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||| ||| |  |||| |||||||||||||||  |||||  |||| |||| ||||||| ||||||||| |||||||    
T  19637849 ggtgtcggatatgtatcgtgtccgacaccgacacatatgattacattgaataatgtcattttcttaaattattatcggtgtc 19637768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 24176373 - 24176430
Alignment:
Q  305 cgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtg 362  Q
    |||||| |||| |||||| |||| |||| ||||||||||||||||| |||||| ||||    
T  24176373 cgacacctataattacactgaatgatgttattttctcaaattattatcggtgttagtg 24176430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 26238115 - 26238171
Alignment:
Q  301 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||| |||||||||| |||||| |||| |||| ||||||||||||||||| |||||||    
T  26238115 acactgacacatata-ttacactgaattatgttattttctcaaattattagcggtgtc 26238171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 30749903 - 30749858
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttct 340  Q
    |||| |||||||||||||||| |||||| |||| ||||||||||||    
T  30749903 tgtccgacaccgacacatataattacactgaattatgtgattttct 30749858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 30771354 - 30771309
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttct 340  Q
    |||| |||||||||||||||| |||||| |||| ||||||||||||    
T  30771354 tgtccgacaccgacacatataattacactgaattatgtgattttct 30771309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 398772 - 398824
Alignment:
Q  306 gacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||| |||| |||||| |||| |||||||||| ||||||||||| |||||||    
T  398772 gacacctataattacactgaattatgtgattttttcaaattattagcggtgtc 398824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 363
Target Start/End: Original strand, 17425101 - 17425157
Alignment:
Q  307 acacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 363  Q
    ||||||||| |||||  |||| |||||||||| ||||||||||| ||||||| ||||    
T  17425101 acacatataattacattgaattatgtgattttatcaaattattatcggtgtccgtgt 17425157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 18337398 - 18337338
Alignment:
Q  289 gtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatt 349  Q
    ||||| |||| ||||||||||| | || |||||| |||| |||||||||| ||||||||||    
T  18337398 gtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 19324612 - 19324572
Alignment:
Q  308 cacatatagttacaccgaatcatgtgattttctcaaattat 348  Q
    |||||||| |||||| |||| ||||||||||||||||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 19562620 - 19562672
Alignment:
Q  298 ctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||||| ||||||||| |||||| |||  ||| ||||||||||||||||||    
T  19562620 ctgacacctacacatataattacactgaactatgagattttctcaaattatta 19562672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 354
Target Start/End: Original strand, 22907318 - 22907394
Alignment:
Q  278 gtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacgg 354  Q
    ||||||||  |||||| ||||  |||||||||| |||| ||| ||| ||| || | |||||||||||||||||||||    
T  22907318 gtgtcggacatgtgttgtgtcccacaccgacacttataattataccaaattatataattttctcaaattattaacgg 22907394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 25452146 - 25452199
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||||||||||||||||   |||||| |||| ||| ||||||||||||||||||    
T  25452146 tgtctgacaccgacacataa--ttacactgaattatgagattttctcaaattatta 25452199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 355
Target Start/End: Original strand, 27471566 - 27471622
Alignment:
Q  299 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggt 355  Q
    ||||||| |||||| || |||||| |||| ||||| |||||||||||||||| ||||    
T  27471566 tgacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggt 27471622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 7928513 - 7928443
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtct 365  Q
    |||| |||||||||||||||| |||||| |||| |||||||||| ||||||||||| ||||||| ||||||    
T  7928513 tgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcggtgtct 7928443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 278 - 358
Target Start/End: Complemental strand, 25093582 - 25093502
Alignment:
Q  278 gtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||||||  |||||| |||| |||||||||||||||| |||||| ||||  |||||||||||||||| |||||| |||||    
T  25093582 gtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtc 25093502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 8789536 - 8789599
Alignment:
Q  285 atgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattat 348  Q
    ||||||||  |||| |||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  8789536 atgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 364
Target Start/End: Complemental strand, 11252045 - 11251972
Alignment:
Q  289 gtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    ||||| |||||||||||||||||||   |||||| |||| |||||||||||||||||||||| |  ||||||||||    
T  11252045 gtgttgtgtctgacaccgacacataa--ttacactgaattatgtgattttctcaaattattagcaatgtcagtgtc 11251972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 363
Target Start/End: Original strand, 16192758 - 16192814
Alignment:
Q  307 acacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 363  Q
    ||||||||| |||||| |||| |||| ||||||||||||||||||||||||| ||||    
T  16192758 acacatataattacactgaattatgttattttctcaaattattaacggtgtcggtgt 16192814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 32804547 - 32804599
Alignment:
Q  306 gacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||| ||||||  ||| ||||||||||||||||||||||||||||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaattattaacggtgtc 32804599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 3618951 - 3618875
Alignment:
Q  286 tgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    |||||||| |||||||||||||||||||   |||| | |||| |||  ||||||||||||||||| |||||||||||||    
T  3618951 tgtgtgttgtgtctgacaccgacacataa--ttacgctgaattatggaattttctcaaattattagcggtgtcagtgtc 3618875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 8383320 - 8383257
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||| ||||||||||| |||| |||||| |||| || ||||||||||||||||||| |||||||    
T  8383320 tgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtc 8383257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 350
Target Start/End: Complemental strand, 20691382 - 20691327
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||||||||||||||  |||||| |||| |||| |||||||||||||||||    
T  20691382 tgtctgacaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 26290429 - 26290371
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||| |||||||||| ||| ||||||  ||||||||||||||||||||||| ||||||    
T  26290429 gacactgacacatataattaaaccgaactatgtgattttctcaaattattaatggtgtc 26290371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 7614416 - 7614481
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtct 365  Q
    |||||||||| ||||| ||| || |||| |||||||||||| ||||||||||| ||||| ||||||    
T  7614416 gacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcggtgtct 7614481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 8039836 - 8039893
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||||||||||||||| |||||| |||| || | ||||||||||||||||| ||||||    
T  8039836 gacaccgacacatataattacactgaattatataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 51206349 - 51206418
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    |||| ||||||||||| | || |||||| |||| |||||||||| ||||||||||| | |||||||||||    
T  51206349 tgtccgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtcagtgtc 51206418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 350
Target Start/End: Complemental strand, 45451641 - 45451561
Alignment:
Q  270 gtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||| |||||||||  |||||  |||| |||||||||||||||  ||| || |||  ||||||||||||||||||||||    
T  45451641 gtgtctcggtgtcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattatta 45451561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 49505150 - 49505210
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggt 355  Q
    |||| ||||| |||||||||| ||||||  ||| |||||||||||||||||||||| ||||    
T  49505150 tgtccgacactgacacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 4201460 - 4201397
Alignment:
Q  294 ctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    ||||| |||||| ||| ||||| ||||||  ||| |||||||||| ||||||||||||||||||    
T  4201460 ctgtcggacaccaacatatataattacacttaattatgtgattttttcaaattattaacggtgt 4201397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 8842392 - 8842330
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||||||||||||| ||||| ||||||| ||| |||||||||||  ||||||||| |||||||    
T  8842392 tgtctgacaccgacatatataattacaccaaattatgtgattttc-aaaattattagcggtgtc 8842330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 10690266 - 10690321
Alignment:
Q  303 accgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||||| ||||| |||||| |||| |||||||||||||| ||||||| |||||||    
T  10690266 accgacaaatataattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 358
Target Start/End: Original strand, 13620764 - 13620823
Alignment:
Q  299 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||| ||||||||||  | ||| |||||||||||||||||||||||| || |||||||    
T  13620764 tgacacagacacatataactgcactgaatcatgtgattttctcaaattactagcggtgtc 13620823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 360
Target Start/End: Original strand, 34307786 - 34307841
Alignment:
Q  305 cgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 360  Q
    |||||| |||| |||||| |||  |||||||||||||||||||||| |||||||||    
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattattagcggtgtcag 34307841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 365
Target Start/End: Original strand, 11313808 - 11313866
Alignment:
Q  307 acacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtct 365  Q
    ||||||||| ||||||  ||| |||||||||||||||||||||| | ||||| ||||||    
T  11313808 acacatataattacactaaattatgtgattttctcaaattattagcagtgtcggtgtct 11313866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 18427007 - 18426957
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||||||| ||||| ||||||||||| |||||||||| | |||||||||    
T  18427007 gacaccgacatatataattacaccgaattatgtgattttttgaaattatta 18426957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 358
Target Start/End: Original strand, 40993313 - 40993395
Alignment:
Q  277 ggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtga-ttttctcaaattattaacggtgtc 358  Q
    |||||||||  |||||  |||| |||||||||||||||| |||||| |||| |||||| |||| | ||||||||| |||||||    
T  40993313 ggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgattttttttaaattattagcggtgtc 40993395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 1509597 - 1509533
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 364  Q
    ||||||||||| | || ||||||  ||| |||||||||| ||||||||||| | |||||||||||    
T  1509597 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtc 1509533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 353
Target Start/End: Complemental strand, 11658868 - 11658820
Alignment:
Q  305 cgacacatatagttacaccgaatcatgtgattttctcaaattattaacg 353  Q
    ||||||||||| | |||| |||| ||| |||||||||||||||||||||    
T  11658868 cgacacatataatcacactgaattatgcgattttctcaaattattaacg 11658820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 357
Target Start/End: Complemental strand, 90932 - 90844
Alignment:
Q  269 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    ||||| |||||||||||   ||||| ||||||||| ||||| ||||| |||||| |||| || |||||||||||||||||||| |||||    
T  90932 cgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgattttctcaaattattaatggtgt 90844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 135313 - 135376
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 363  Q
    |||||||||||||||| |||||| |||| |||||||||||||||||||||| | ||||| ||||    
T  135313 gacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgt 135376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 358
Target Start/End: Original strand, 5775358 - 5775417
Alignment:
Q  299 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||||||||||||||| ||||||  ||| ||||||||||||||||||||||| ||||||    
T  5775358 tgacaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtc 5775417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 358
Target Start/End: Original strand, 22440609 - 22440659
Alignment:
Q  308 cacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgtc 22440659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 363
Target Start/End: Original strand, 23861371 - 23861495
Alignment:
Q  240 atgaagcacgaacactctttcaaattaaacgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatag--ttacaccgaatcatgtgattt 337  Q
    |||||||||||||||||||| || |||  |||||||||||| | ||  |||||  | |||||||||||||||||||   |||||  ||||||||||||||    
T  23861371 atgaagcacgaacactctttgaa-ttaggcgtgtcttggtgacagacatgtgtcgtatctgacaccgacacatatataattacattgaatcatgtgattt 23861469  T
Q  338 tctcaaattattaacggtgtcagtgt 363  Q
    | |||| |||||| ||||||| ||||    
T  23861470 tatcaatttattagcggtgtcggtgt 23861495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 18576037 - 18576086
Alignment:
Q  299 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattat 348  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  18576037 tgacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 9996909 - 9996849
Alignment:
Q  289 gtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatt 349  Q
    ||||| ||||||||||||| ||||||| ||| || |||| |||||||||||||||||||||    
T  9996909 gtgttatgtctgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 356
Target Start/End: Complemental strand, 903971 - 903924
Alignment:
Q  309 acatatagttacaccgaatcatgtgattttctcaaattattaacggtg 356  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtg 903924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 8423714 - 8423777
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||| ||||||||||  |||| |||||| |||| |||||||||||||||||||||| |||||||    
T  8423714 tgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtc 8423777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 357
Target Start/End: Complemental strand, 6863212 - 6863154
Alignment:
Q  299 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    ||||||||| ||||||| || |||||||| || ||||||| ||||||||||||||||||    
T  6863212 tgacaccgatacatataattgcaccgaattatatgattttttcaaattattaacggtgt 6863154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 15659761 - 15659811
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||| ||||||||| ||||||||||| ||| ||||||||||||||||||    
T  15659761 gacaccaacacatataattacaccgaattatgagattttctcaaattatta 15659811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 358
Target Start/End: Complemental strand, 40613504 - 40613450
Alignment:
Q  304 ccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||||||||| |||||| |||| |||||||||||||||| ||||| |||||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtc 40613450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 358
Target Start/End: Complemental strand, 11931339 - 11931280
Alignment:
Q  299 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||| ||||||||||| ||||||  ||| |||||||||| ||| |||||||||||||||    
T  11931339 tgacatcgacacatatatttacactaaattatgtgattttttcatattattaacggtgtc 11931280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 16189765 - 16189710
Alignment:
Q  302 caccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||||||||| ||| |||||| |||| |||||||||||||||||| ||| ||||||    
T  16189765 caccgacacacataattacactgaattatgtgattttctcaaatttttagcggtgt 16189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 350
Target Start/End: Complemental strand, 33950199 - 33950144
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||||||||||||||  |||||   ||| ||||||||||||||||||||||    
T  33950199 tgtctgacaccgacacatatgattacattaaattatgtgattttctcaaattatta 33950144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 350
Target Start/End: Complemental strand, 36635375 - 36635332
Alignment:
Q  307 acacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||    
T  36635375 acacatataattacactgaattatgtgattttctcaaattatta 36635332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 54580019 - 54580074
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||| ||||||||||| |||| |||||| |||| |||||||||| |||||||||||    
T  54580019 tgtccgacaccgacacttataattacactgaattatgtgattttttcaaattatta 54580074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 4672086 - 4672136
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||||||||||| ||||| |||| |||| |||||| ||||||||||    
T  4672086 gacaccgacacatatagctacactgaattatgtaattttcccaaattatta 4672136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 30522927 - 30522973
Alignment:
Q  311 atatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||||||||||| |||| ||||||||||||||||| |||| ||||||    
T  30522927 atatagttacactgaattatgtgattttctcaaataattagcggtgt 30522973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 21720508 - 21720568
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 360  Q
    |||||||||| |||||||||||   ||| || ||||||| |||||||||||| ||||||||    
T  21720508 gacaccgacatatatagttacattaaattatatgattttatcaaattattaagggtgtcag 21720568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 350
Target Start/End: Original strand, 28964227 - 28964299
Alignment:
Q  278 gtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    ||||||||| |||||  |||| ||||| ||||| | || |||||| |||| |||||||||| |||||||||||    
T  28964227 gtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattatta 28964299  T

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Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 30982879 - 30982935
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtg 356  Q
    ||||||||||| |||| |||||| |||  ||||||||||||||||| |||| |||||    
T  30982879 gacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

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Target: scaffold0697 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 1733 - 1644
Alignment:
Q  269 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||||| | ||||||||  |||||  |||| ||||||||||| |||| ||| ||| ||| || |||||||||||||||||||||||||||    
T  1733 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtc 1644  T

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Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 21098 - 21041
Alignment:
Q  303 accgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 360  Q
    ||||||||||||| ||| ||||| | |||||||||||||||||||||||| |||||||    
T  21098 accgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcag 21041  T

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Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 44529 - 44586
Alignment:
Q  303 accgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 360  Q
    ||||||||||||| |||||| |||| |||||||||||||||||| ||| |||||||||    
T  44529 accgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtcag 44586  T

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Target: scaffold1528 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 363
Target Start/End: Complemental strand, 1092 - 1030
Alignment:
Q  301 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 363  Q
    |||| ||||||||||||||||| |||| |||| ||||| ||||||||||| ||||||| ||||    
T  1092 acactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgt 1030  T

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Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 9748 - 9798
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 350  Q
    |||||||||||||||| |||||| |||| | ||||||||||||||||||||    
T  9748 gacaccgacacatataattacactgaattaagtgattttctcaaattatta 9798  T

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Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 28907 - 28850
Alignment:
Q  301 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||||||||||||| |||||  |||| ||| |||||||| |||||||||||||||||    
T  28907 acaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtc 28850  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 317 - 358
Target Start/End: Original strand, 192267 - 192308
Alignment:
Q  317 ttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  192267 ttacaccgaattatgtaattttctcaaattattaacggtgtc 192308  T

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Target: scaffold0236 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 25769 - 25828
Alignment:
Q  300 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtca 359  Q
    ||||||||||| |||| ||||||  ||| ||||||||||||| |||||||||| ||||||    
T  25769 gacaccgacacttataattacactaaattatgtgattttctctaattattaaccgtgtca 25828  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 70341 - 70278
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 358  Q
    |||| ||||||||||| |||| |||||| |||| |||| ||||| ||||||||||||| |||||    
T  70341 tgtccgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtc 70278  T

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Target: scaffold0044 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 349
Target Start/End: Complemental strand, 53236 - 53189
Alignment:
Q  302 caccgacacatatagttacaccgaatcatgtgattttctcaaattatt 349  Q
    ||||||||| |||| |||||| |||| |||||||||||||||||||||    
T  53236 caccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 357
Target Start/End: Complemental strand, 63836 - 63774
Alignment:
Q  295 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 357  Q
    |||||||||||||||| | || || ||| |||| |||| ||||||||||||||||| ||||||    
T  63836 tgtctgacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcggtgt 63774  T

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