View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10396_low_27 (Length: 240)

Name: NF10396_low_27
Description: NF10396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10396_low_27
NF10396_low_27
[»] chr3 (12 HSPs)
chr3 (5-226)||(29427633-29427854)
chr3 (7-87)||(20192596-20192676)
chr3 (7-62)||(3044249-3044304)
chr3 (5-48)||(5391918-5391961)
chr3 (16-95)||(20669164-20669243)
chr3 (5-48)||(53762382-53762425)
chr3 (5-87)||(3467376-3467458)
chr3 (16-62)||(25925767-25925813)
chr3 (19-57)||(42545670-42545708)
chr3 (21-87)||(54775127-54775193)
chr3 (5-50)||(38318997-38319042)
chr3 (16-48)||(52619042-52619074)
[»] chr6 (14 HSPs)
chr6 (16-88)||(8420196-8420268)
chr6 (5-87)||(31624090-31624172)
chr6 (7-60)||(27595557-27595610)
chr6 (7-60)||(27693429-27693482)
chr6 (8-88)||(2160928-2161008)
chr6 (7-87)||(4246410-4246490)
chr6 (5-48)||(20368168-20368211)
chr6 (16-62)||(4420668-4420714)
chr6 (21-87)||(5328973-5329039)
chr6 (7-61)||(9667975-9668029)
chr6 (5-45)||(769180-769220)
chr6 (7-87)||(8010357-8010437)
chr6 (16-48)||(17770453-17770485)
chr6 (27-87)||(32843317-32843377)
[»] chr5 (9 HSPs)
chr5 (116-175)||(11054085-11054144)
chr5 (28-95)||(11684406-11684473)
chr5 (5-86)||(3977309-3977390)
chr5 (5-85)||(21768185-21768265)
chr5 (16-84)||(36638750-36638818)
chr5 (5-63)||(4619731-4619789)
chr5 (16-62)||(41052893-41052939)
chr5 (5-87)||(18857386-18857470)
chr5 (140-176)||(6593182-6593218)
[»] chr4 (9 HSPs)
chr4 (6-60)||(6466035-6466089)
chr4 (14-87)||(7694007-7694080)
chr4 (5-62)||(20936217-20936274)
chr4 (7-46)||(41097246-41097285)
chr4 (16-62)||(6987740-6987786)
chr4 (16-50)||(17223035-17223069)
chr4 (5-50)||(1965978-1966023)
chr4 (16-93)||(27721711-27721788)
chr4 (14-50)||(41603408-41603444)
[»] chr1 (15 HSPs)
chr1 (5-63)||(35925714-35925772)
chr1 (16-87)||(35017576-35017647)
chr1 (16-50)||(6262057-6262091)
chr1 (6-87)||(6292493-6292574)
chr1 (5-85)||(37811854-37811934)
chr1 (15-50)||(3244936-3244971)
chr1 (7-98)||(27140467-27140558)
chr1 (1-59)||(4202135-4202193)
chr1 (5-87)||(15515541-15515623)
chr1 (7-60)||(15437990-15438043)
chr1 (16-93)||(23407425-23407502)
chr1 (6-87)||(31517729-31517810)
chr1 (26-87)||(35179139-35179200)
chr1 (6-42)||(23445379-23445415)
chr1 (116-176)||(34619490-34619550)
[»] chr8 (6 HSPs)
chr8 (16-87)||(12361192-12361263)
chr8 (7-60)||(29262864-29262917)
chr8 (5-48)||(43368688-43368731)
chr8 (7-89)||(11569447-11569529)
chr8 (4-49)||(3254263-3254308)
chr8 (19-87)||(11185221-11185289)
[»] chr2 (9 HSPs)
chr2 (7-88)||(1742022-1742103)
chr2 (28-80)||(32098341-32098393)
chr2 (7-62)||(34652026-34652081)
chr2 (16-62)||(1939331-1939377)
chr2 (16-98)||(40434980-40435062)
chr2 (16-50)||(43530110-43530144)
chr2 (19-81)||(43965123-43965185)
chr2 (69-98)||(16451107-16451136)
chr2 (16-60)||(10198479-10198523)
[»] scaffold0286 (1 HSPs)
scaffold0286 (8-88)||(16109-16189)
[»] scaffold0004 (1 HSPs)
scaffold0004 (16-49)||(98639-98672)
[»] chr7 (2 HSPs)
chr7 (22-63)||(28165115-28165156)
chr7 (27-87)||(46609103-46609163)
[»] scaffold0221 (1 HSPs)
scaffold0221 (16-48)||(2805-2837)


Alignment Details
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 29427633 - 29427854
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttatatgaaaacaattgtttta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29427633 gaaaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacaaaaacagcttatatgaaaacaattgtttta 29427732  T
Q  105 tcttttcgctctagaaatagcttaaacataaccatttatgctataagccgtagattaagttgtttatccaaaatgggccatgatctccatacttaaaaat 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29427733 tcttttcgctctagaaatagcttaaacataaccatttatgctataagccgtagattaagttgtttatccaaaatgggccatgatctccatacttaaaaat 29427832  T
Q  205 ctatctcaatattgaagcacat 226  Q
    ||||||||||||||||||||||    
T  29427833 ctatctcaatattgaagcacat 29427854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 20192596 - 20192676
Alignment:
Q  7 aaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    ||||| || ||||||||| |||||||| ||||||||| |||||| ||| ||||||  || || |||| |||||||||||||    
T  20192596 aaacagcttatgacatgtccataagctgttttcaactcatttccataagctctcccgaataagttacaaaaacagcttata 20192676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 3044249 - 3044304
Alignment:
Q  7 aaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctcca 62  Q
    ||||| || |||||||||||||||||| |||||||||||||| | ||| |||||||    
T  3044249 aaacaacttatgacatgttcataagctgttttcaacttattttcataagctctcca 3044304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 5391961 - 5391918
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttattt 48  Q
    ||||||| || |||||||||||||||||| ||||||||||||||    
T  5391961 gaaaacagcttatgacatgttcataagctgttttcaacttattt 5391918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 20669243 - 20669164
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttatatgaaaaca 95  Q
    |||||||||||||||||| |||||  ||||||| | ||| |||||||  | | |||| ||||||||||||||||| ||||    
T  20669243 atgacatgttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaacagcttatatgacaaca 20669164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 53762382 - 53762425
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttattt 48  Q
    ||||||| || |||||||||||||||||| ||||||||||||||    
T  53762382 gaaaacagcttatgacatgttcataagctgttttcaacttattt 53762425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 3467376 - 3467458
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    ||||||| || ||||||||  |||||| | ||| || ||||||||| |||||||||||||  | |||||||||||| ||||||    
T  3467376 gaaaacagcttatgacatggccataagttgtttgcatcttatttccataatctctccatagaagcttacgaaaacaacttata 3467458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 25925813 - 25925767
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttccgtaatctctcca 62  Q
    |||||||||||||||||| |||||||||||||| | ||| |||||||    
T  25925813 atgacatgttcataagctgttttcaacttattttcataagctctcca 25925767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 42545708 - 42545670
Alignment:
Q  19 acatgttcataagctattttcaacttatttccgtaatct 57  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  42545708 acatgttcataagctgttttcagcttatttccgtaatct 42545670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 54775193 - 54775127
Alignment:
Q  21 atgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    |||| ||||||||  ||||| ||||||| | ||| |||||||| | |||||||||||||||||||||    
T  54775193 atgtccataagctgctttcatcttattttcataaactctccatgataacttacgaaaacagcttata 54775127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 38319042 - 38318997
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttatttcc 50  Q
    ||||||| || || |||||||||||||||||||||| |||||||||    
T  38319042 gaaaacaacttataacatgttcataagctattttcagcttatttcc 38318997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 52619074 - 52619042
Alignment:
Q  16 atgacatgttcataagctattttcaacttattt 48  Q
    ||||||||||||||||||||||||| |||||||    
T  52619074 atgacatgttcataagctattttcaccttattt 52619042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 8420196 - 8420268
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttatat 88  Q
    ||||||||| || |||||||||||||||||||||| ||| |||||||| | | ||||||| ||||||||||||    
T  8420196 atgacatgtccacaagctattttcaacttatttccataagctctccattatagcttacgagaacagcttatat 8420268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 31624172 - 31624090
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    ||||||| || |||||||||||||||||| |||||||||||||| | |||| ||||||  | | | || ||||||||||||||    
T  31624172 gaaaacagcttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttata 31624090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 27595557 - 27595610
Alignment:
Q  7 aaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctc 60  Q
    ||||| || |||||||||||||||||||||||||| | |||||||||| |||||    
T  27595557 aaacaacttatgacatgttcataagctattttcaagtaatttccgtaaactctc 27595610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 27693429 - 27693482
Alignment:
Q  7 aaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctc 60  Q
    ||||| || |||||||||||||||||||||||||| | |||||||||| |||||    
T  27693429 aaacaacttatgacatgttcataagctattttcaagtaatttccgtaaactctc 27693482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 2160928 - 2161008
Alignment:
Q  8 aacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttatat 88  Q
    ||||||| | ||||||| |||||| | |||||||||||||||| |||||| ||||  ||| |||| ||||||| |||||||    
T  2160928 aacaccttacgacatgtccataagttgttttcaacttatttccataatctttccaagacagcttaggaaaacaacttatat 2161008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 4246490 - 4246410
Alignment:
Q  7 aaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    ||||| || ||||||||| |||||||| ||||||||||||||   ||  |||||||||| | |||| ||||||||||||||    
T  4246490 aaacaactcatgacatgtccataagctgttttcaacttatttttatatgctctccataatagcttatgaaaacagcttata 4246410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 20368168 - 20368211
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttattt 48  Q
    ||||||| || ||||||||||||||||||| |||||||||||||    
T  20368168 gaaaacaacttatgacatgttcataagctagtttcaacttattt 20368211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 4420714 - 4420668
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttccgtaatctctcca 62  Q
    |||||||||||||||||| |||||| ||||||||| ||| |||||||    
T  4420714 atgacatgttcataagctgttttcagcttatttccataagctctcca 4420668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 5329039 - 5328973
Alignment:
Q  21 atgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    |||| ||||||||  ||||| ||||||| | ||| |||||||| | |||||||||||||||||||||    
T  5329039 atgtccataagctgctttcatcttattttcataaactctccatgataacttacgaaaacagcttata 5328973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 9667975 - 9668029
Alignment:
Q  7 aaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctcc 61  Q
    ||||| || ||||||||| |||||||| |||||||||||||||| ||| ||||||    
T  9667975 aaacaacttatgacatgtccataagctgttttcaacttatttccataagctctcc 9668029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 769220 - 769180
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaactta 45  Q
    ||||||| || |||||||||||||||||| |||||||||||    
T  769220 gaaaacatcttatgacatgttcataagctgttttcaactta 769180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 8010437 - 8010357
Alignment:
Q  7 aaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    ||||| || |||||||||||||||||||||||||  |||||||  |||  ||||||  | ||||||  |||||||||||||    
T  8010437 aaacaactcatgacatgttcataagctattttcagtttatttctataagttctccaggataacttattaaaacagcttata 8010357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 17770453 - 17770485
Alignment:
Q  16 atgacatgttcataagctattttcaacttattt 48  Q
    ||||||||||||||| |||||||||||||||||    
T  17770453 atgacatgttcataaactattttcaacttattt 17770485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 32843317 - 32843377
Alignment:
Q  27 ataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    ||||||| ||||||  |||||||| |||||| ||||||||| ||||  |||||||||||||    
T  32843317 ataagctcttttcagtttatttccataatctttccataacagcttatcaaaacagcttata 32843377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 11054144 - 11054085
Alignment:
Q  116 tagaaatagcttaaacataaccatttatgctataagccgtagattaagttgtttatccaa 175  Q
    ||||||||||||| |||||| | |||||||||||||||| | ||||||||||||||||||    
T  11054144 tagaaatagcttatacataagcgtttatgctataagccggaaattaagttgtttatccaa 11054085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 11684473 - 11684406
Alignment:
Q  28 taagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttatatgaaaaca 95  Q
    |||||| |||||||||||||||||||| |||||||  | | |||| ||||| ||||||||||||||||    
T  11684473 taagctgttttcaacttatttccgtaagctctccagcatagcttatgaaaatagcttatatgaaaaca 11684406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 3977390 - 3977309
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttat 86  Q
    ||||||| || ||||||||||| | |||| | |||| ||||||| | |||| |||||| ||||||||| |||||||||||||    
T  3977390 gaaaacagcttatgacatgttccttagctgtcttcagcttattttcataatttctccacaacaacttatgaaaacagcttat 3977309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 21768185 - 21768265
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagctta 85  Q
    ||||||| || ||||||||| |||| ||| |||||||||||||| ||||| |||| ||  | |||||| ||||||||||||    
T  21768185 gaaaacagcttatgacatgtccatacgctgttttcaacttattttcgtaagctcttcaagataacttatgaaaacagctta 21768265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 36638818 - 36638750
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagctt 84  Q
    |||||||||||||||||| |||||| ||||||||| ||| ||||| |  | |||||| |||||||||||    
T  36638818 atgacatgttcataagcttttttcagcttatttccataagctctctaggataacttatgaaaacagctt 36638750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 4619789 - 4619731
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccat 63  Q
    ||||||| |||||||||||||||||||||  ||||| ||||||||| |||  |||||||    
T  4619789 gaaaacaactaatgacatgttcataagctggtttcaccttatttccataagttctccat 4619731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 41052939 - 41052893
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttccgtaatctctcca 62  Q
    ||||||||||||||| ||||||| ||||||||||| ||| |||||||    
T  41052939 atgacatgttcataaactatttttaacttatttccataagctctcca 41052893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 18857386 - 18857470
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttatttccgta--atctctccataacaacttacgaaaacagcttata 87  Q
    ||||||| ||||||||||||||||||||| |||| |||||| || | ||  | |||||||  ||| |||| ||||||||||||||    
T  18857386 gaaaacagctaatgacatgttcataagctgtttttaacttaatttcataacacctctccaagacagcttatgaaaacagcttata 18857470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 6593218 - 6593182
Alignment:
Q  140 ttatgctataagccgtagattaagttgtttatccaaa 176  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  6593218 ttatgctataagctgtaaattaagttgtttatccaaa 6593182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 6466035 - 6466089
Alignment:
Q  6 aaaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctc 60  Q
    |||||| || |||| |||||||||||||||||||||||||||||| |||||||||    
T  6466035 aaaacaacttatgagatgttcataagctattttcaacttatttccataatctctc 6466089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 7694007 - 7694080
Alignment:
Q  14 taatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    |||||||||||||||||| | |||||| ||||||||| ||| |||||||  | |||||| ||||||||||||||    
T  7694007 taatgacatgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttata 7694080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 20936217 - 20936274
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctcca 62  Q
    ||||||| || |||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  20936217 gaaaacaacttatgatatgttcataagctgttttcaccttatttccataatctctcca 20936274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 41097246 - 41097285
Alignment:
Q  7 aaacacctaatgacatgttcataagctattttcaacttat 46  Q
    ||||| |||||||||||| |||||||||||||||||||||    
T  41097246 aaacaactaatgacatgtccataagctattttcaacttat 41097285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 6987740 - 6987786
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttccgtaatctctcca 62  Q
    ||||||||| ||||| ||||||||||||||||||| ||| |||||||    
T  6987740 atgacatgtccataaactattttcaacttatttccataagctctcca 6987786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 17223035 - 17223069
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttcc 50  Q
    |||||||||||||||||| ||||||||||||||||    
T  17223035 atgacatgttcataagctgttttcaacttatttcc 17223069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 1966023 - 1965978
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttatttcc 50  Q
    ||||||| || |||||||||||||||||| |||| |||||||||||    
T  1966023 gaaaacaacttatgacatgttcataagctgtttttaacttatttcc 1965978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 27721788 - 27721711
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttatatgaaaa 93  Q
    ||||||| | |||||||| |||||| ||||||| || || |||||||  | |||||| ||||||||||||||| ||||    
T  27721788 atgacatatccataagctgttttcagcttattttcgcaagctctccaggataacttatgaaaacagcttatataaaaa 27721711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 41603408 - 41603444
Alignment:
Q  14 taatgacatgttcataagctattttcaacttatttcc 50  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  41603408 taatgacatattcataagctattttcagcttatttcc 41603444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 35925772 - 35925714
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccat 63  Q
    ||||||| || |||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  35925772 gaaaacagcttatgacatgttcataagctgttttcaacttatttccataaactctccat 35925714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 35017647 - 35017576
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    ||||||||| |||||| |||||||||||||||||| ||| |||||||  ||| |||| ||||||||| ||||    
T  35017647 atgacatgtccataagttattttcaacttatttccataagctctccaggacagcttatgaaaacagcatata 35017576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 6262091 - 6262057
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttcc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  6262091 atgacatgttcataagctattttcaacttatttcc 6262057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 6292574 - 6292493
Alignment:
Q  6 aaaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    |||||| || |||||||||||||||||| |||||| ||||||| | ||| ||||||| || |  ||||||||| ||||||||    
T  6292574 aaaacagcttatgacatgttcataagctgttttcagcttattttcataagctctccaaaatagtttacgaaaatagcttata 6292493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 37811934 - 37811854
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagctta 85  Q
    ||||||| || ||||||||||||||| || |||||||||||||||| | | |||||||| |   |||| ||||||||||||    
T  37811934 gaaaacagcttatgacatgttcataaactgttttcaacttatttccattagctctccatgatggcttatgaaaacagctta 37811854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 3244971 - 3244936
Alignment:
Q  15 aatgacatgttcataagctattttcaacttatttcc 50  Q
    |||||||||| |||||||||||||||||||||||||    
T  3244971 aatgacatgtccataagctattttcaacttatttcc 3244936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 27140558 - 27140467
Alignment:
Q  7 aaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttatatgaaaacaatt 98  Q
    ||||| || ||||||||| |||||| | |||||| ||||||| | ||| |||||||| | | ||||  |||||||||||||| |||||||||    
T  27140558 aaacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttatataaaaacaatt 27140467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 4202135 - 4202193
Alignment:
Q  1 cttagaaaacacctaatgacatgttcataagctattttcaacttatttccgtaatctct 59  Q
    |||| |||||| || ||||||||| ||||||||||||||| ||||||| ||||| ||||    
T  4202135 cttataaaacagcttatgacatgtccataagctattttcagcttattttcgtaagctct 4202193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 15515623 - 15515541
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    ||||||| || |||||||||  ||| ||||||||||| |||||||| ||| || ||||| | |||||| ||||||| ||||||    
T  15515623 gaaaacaacttatgacatgtcaatacgctattttcaatttatttccataagctatccatgataacttatgaaaacaacttata 15515541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 15438043 - 15437990
Alignment:
Q  7 aaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctc 60  Q
    ||||| || |||||||||||||||| || ||||| ||||||||||||| |||||    
T  15438043 aaacaacttatgacatgttcataagttactttcagcttatttccgtaaactctc 15437990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 23407502 - 23407425
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttatatgaaaa 93  Q
    ||||||||| |||| ||||| ||||||||| ||   ||| ||||| | || |||||| ||||||||||||||||||||    
T  23407502 atgacatgtccataggctatgttcaacttaatttgataaactctctagaataacttatgaaaacagcttatatgaaaa 23407425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 31517729 - 31517810
Alignment:
Q  6 aaaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    |||||| || |||||||||||||||||| |||||| ||||||| | ||| |||||||  |||  ||| ||| ||||||||||    
T  31517729 aaaacaactcatgacatgttcataagctgttttcagcttattttcataagctctccaagacagattatgaagacagcttata 31517810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 35179200 - 35179139
Alignment:
Q  26 cataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    |||||||| |||||| ||||||| | |||  ||||||||| |||||| ||||||||||||||    
T  35179200 cataagctgttttcagcttattttcataagttctccataataacttatgaaaacagcttata 35179139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 23445415 - 23445379
Alignment:
Q  6 aaaacacctaatgacatgttcataagctattttcaac 42  Q
    |||||| || |||||||||||||||||||||||||||    
T  23445415 aaaacaacttatgacatgttcataagctattttcaac 23445379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 34619490 - 34619550
Alignment:
Q  116 tagaaatagcttaaacataaccatttatgctataagccgtagattaagttgtttatccaaa 176  Q
    ||||||| ||||| |||||| || ||||||||||||| | | |||||| ||||||||||||    
T  34619490 tagaaatggcttatacataagcaattatgctataagctgcaaattaagctgtttatccaaa 34619550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 12361263 - 12361192
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    ||||||||| |||||||| |||||||||||||||| | | ||||||  || |||||| ||||||||||||||    
T  12361263 atgacatgtccataagctgttttcaacttatttccattagctctcctgaataacttatgaaaacagcttata 12361192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 29262864 - 29262917
Alignment:
Q  7 aaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctc 60  Q
    ||||| || |||||||||||||||||||||||||| | |||||||||| |||||    
T  29262864 aaacaacttatgacatgttcataagctattttcaagtaatttccgtaaactctc 29262917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 43368688 - 43368731
Alignment:
Q  5 gaaaacacctaatgacatgttcataagctattttcaacttattt 48  Q
    ||||||| || ||||||||||||| |||||||||||||||||||    
T  43368688 gaaaacaacttatgacatgttcattagctattttcaacttattt 43368731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 11569447 - 11569529
Alignment:
Q  7 aaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttatatg 89  Q
    ||||| || ||||||||| |||||| | |||||| ||||||| |  ||||||||||| | | |||| ||||||||||||||||    
T  11569447 aaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaaacagcttatatg 11569529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 3254308 - 3254263
Alignment:
Q  4 agaaaacacctaatgacatgttcataagctattttcaacttatttc 49  Q
    |||||||| || |||||||||||||||||| |||||| ||||||||    
T  3254308 agaaaacagcttatgacatgttcataagctgttttcagcttatttc 3254263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 11185289 - 11185221
Alignment:
Q  19 acatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    ||||||||||||| | |||||||||||||||| | | |||||||| | | || ||||||||| ||||||    
T  11185289 acatgttcataagttgttttcaacttatttccatcagctctccatgatagctaacgaaaacaacttata 11185221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 1742022 - 1742103
Alignment:
Q  7 aaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttatat 88  Q
    ||||| || ||||||||| |||||||||| |||||||||||||| ||| |||| ||| | |  ||| |||||||||||||||    
T  1742022 aaacaacttatgacatgtgcataagctatcttcaacttatttccataaactcttcatgatagattatgaaaacagcttatat 1742103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 32098341 - 32098393
Alignment:
Q  28 taagctattttcaacttatttccgtaatctctccataacaacttacgaaaaca 80  Q
    ||||||||||||| |||||||||||||  ||||||||| |||||| |||||||    
T  32098341 taagctattttcagcttatttccgtaagttctccataataacttatgaaaaca 32098393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 34652026 - 34652081
Alignment:
Q  7 aaacacctaatgacatgttcataagctattttcaacttatttccgtaatctctcca 62  Q
    ||||| || ||||||||| |||||||| |||||||||||||||| ||| |||||||    
T  34652026 aaacaacttatgacatgtccataagctgttttcaacttatttccataagctctcca 34652081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 1939331 - 1939377
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttccgtaatctctcca 62  Q
    ||||||||| |||||||| |||||||||||||||| ||| |||||||    
T  1939331 atgacatgtccataagctgttttcaacttatttccataagctctcca 1939377  T

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Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 40434980 - 40435062
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttatatgaaaacaatt 98  Q
    ||||||||| ||||||||||||| |  | |||||  ||| |||||||  | |||||| |||||||||||||| ||||||||||    
T  40434980 atgacatgtccataagctattttaagataatttcaataagctctccagtataacttatgaaaacagcttataggaaaacaatt 40435062  T

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Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 43530110 - 43530144
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttcc 50  Q
    |||||||||||| ||||||||||||||||||||||    
T  43530110 atgacatgttcacaagctattttcaacttatttcc 43530144  T

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Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 43965123 - 43965185
Alignment:
Q  19 acatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacag 81  Q
    |||||||||||| |||||| ||||||||| |||||| ||||| | || |||||| ||||||||    
T  43965123 acatgttcataacctatttacaacttattgccgtaagctctctagaataacttatgaaaacag 43965185  T

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Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 98
Target Start/End: Complemental strand, 16451136 - 16451107
Alignment:
Q  69 cttacgaaaacagcttatatgaaaacaatt 98  Q
    ||||||||||||||||||||||||||||||    
T  16451136 cttacgaaaacagcttatatgaaaacaatt 16451107  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 10198479 - 10198523
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttccgtaatctctc 60  Q
    |||||||||||||||||| || ||| ||||||||| |||||||||    
T  10198479 atgacatgttcataagctgttgtcagcttatttccataatctctc 10198523  T

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Target: scaffold0286 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 16189 - 16109
Alignment:
Q  8 aacacctaatgacatgttcataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttatat 88  Q
    ||||||| | ||||||| |||||| | |||||||||||||||| |||||| ||||  ||| |||| ||||||| |||||||    
T  16189 aacaccttacgacatgtccataagttgttttcaacttatttccataatctttccaagacagcttaggaaaacaacttatat 16109  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 98639 - 98672
Alignment:
Q  16 atgacatgttcataagctattttcaacttatttc 49  Q
    |||||||||||||||||| |||||||||||||||    
T  98639 atgacatgttcataagctgttttcaacttatttc 98672  T

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Target: chr7 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 28165156 - 28165115
Alignment:
Q  22 tgttcataagctattttcaacttatttccgtaatctctccat 63  Q
    |||||||||||| |||||||||||||||| ||| ||||||||    
T  28165156 tgttcataagctgttttcaacttatttccataagctctccat 28165115  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 46609103 - 46609163
Alignment:
Q  27 ataagctattttcaacttatttccgtaatctctccataacaacttacgaaaacagcttata 87  Q
    |||| ||||||||| ||||||||| ||||||||| | || ||||||| | |||||||||||    
T  46609103 ataaactattttcagcttatttccataatctctcaaaaataacttaccagaacagcttata 46609163  T

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Target: scaffold0221 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 2837 - 2805
Alignment:
Q  16 atgacatgttcataagctattttcaacttattt 48  Q
    |||||||||||| ||||||||||||||||||||    
T  2837 atgacatgttcacaagctattttcaacttattt 2805  T

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