View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10396_low_28 (Length: 229)
Name: NF10396_low_28
Description: NF10396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10396_low_28 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 41116607 - 41116830
Alignment:
| Q |
5 |
catgatcgacaataacatttcaacaaaaatagtaagatatttctttcagcaactttgacgagtgaagggacatgtgacatggtaatataattaactgata |
104 |
Q |
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| T |
41116607 |
catgatcgacaataacatttcaacaaaaatagtaagatatttctttcagcaactttgacgagtgaagggaaatgtgacatggtaatataattaactgata |
41116706 |
T |
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| Q |
105 |
tgtagtaaaataatttttccaaatttggaagatatgttggtgtcgacaagggacataaaacttctgttgttggagagctgcttaaaacatgagaaattca |
204 |
Q |
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| T |
41116707 |
tgtagcaaaataatttttccaaatttggaagatatgttggtgtcgacacgggacataaaacttctgttgttggagagctgcttaaaacatg-gaaattca |
41116805 |
T |
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| Q |
205 |
tatcaaaagaaaagtttcaaaccac |
229 |
Q |
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| T |
41116806 |
tatcaaaagaaaagtttcaaaccac |
41116830 |
T |
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