View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10396_low_31 (Length: 219)
Name: NF10396_low_31
Description: NF10396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10396_low_31 |
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Alignment Details
Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 7907506 - 7907715
Alignment:
| Q |
1 |
caagtatgtgaagaaagaaaaaaccatgttggctagatatactaatatattcatatattatttttccaactacatcaaacattttaatctccttgttctc |
100 |
Q |
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| T |
7907506 |
caagtatgtgaagaaagaaaaaaccatgttggctagatatactaatatattcatatattatttttccaactacatcaaacattttaatctccttgttctc |
7907605 |
T |
|
| Q |
101 |
caactccattgaataatttatttagtaattgaccataattaatca--tttctcgtcatacttggagcatacaagacctcataaatgatagattcatggcc |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7907606 |
caactccattgaataatttatttagtaattgaccataactaatcatgtttctcttcatacttggagcatacaagacctcataaatgatagattcatggcc |
7907705 |
T |
|
| Q |
199 |
atattttctt |
208 |
Q |
| |
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|||||||||| |
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| T |
7907706 |
atattttctt |
7907715 |
T |
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