View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10397_low_4 (Length: 328)
Name: NF10397_low_4
Description: NF10397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10397_low_4 |
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Alignment Details
Target: chr6 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 28 - 295
Target Start/End: Complemental strand, 32344433 - 32344166
Alignment:
| Q |
28 |
tatttagaatcgaaaatgtaatattgatggttaatattagcaaccatagtttagagacattttaaagttaagtcactaagagacattgaaatattttggt |
127 |
Q |
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| T |
32344433 |
tatttagaatcgaaaatctaatattgatggttaatattagcaaccatagtttagagacattttaaagttaagtcactaagagacattgaaatattttggt |
32344334 |
T |
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| Q |
128 |
tacaaaattcgtccttaaatataaaactttttactatattggttaataaatttccctatataccatacggtcctatttataaaccccatcaccatctaca |
227 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32344333 |
tacaaaattcgtccttaaatataaaactttttactatattggttaataaatttccctatataccatacggtcctatttataaaccccatcaccatctaca |
32344234 |
T |
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| Q |
228 |
acctgtaaatgggtgccaccaccccaacaaatttaatcacacaatgtagtaatattactattatccaa |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32344233 |
acctgtaaatgggtgccaccaccccaacaaatttaatcacacaatgtagtaatattactattatccaa |
32344166 |
T |
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