View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10398_7 (Length: 313)
Name: NF10398_7
Description: NF10398
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10398_7 |
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Alignment Details
Target: chr8 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 15694903 - 15695206
Alignment:
| Q |
1 |
atcccgcatataagtaggtgattgagcttttgtaatgagttgtttgaagcttatatatagtatgaaagcaaaaaatattgatgtcaagtttagttttctt |
100 |
Q |
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| T |
15694903 |
atcccgcatataagtaggtgattgagcttttgtaatgagttgtttgaagcttatatatagtatgaaagcaaaaaatattgatctcaagtttagttttctt |
15695002 |
T |
|
| Q |
101 |
ccttccatggagtactatgttcctattgcatgattccaattattgccaatgatgttgtaatgataattgagctattatatttagaagtccaaagcaaatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15695003 |
ccttccatggagtactatgttcctattgcatgattccaattattgccaatgatgttgtaatgataattgagctattatatttagaagtccaaagcaaatg |
15695102 |
T |
|
| Q |
201 |
atgctgtaatgatagaaaatttgagtcatgaatttatgtttaccaagtccactcttcatgtgtttgtattgatagatattttagaaaagtcaaaggatat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15695103 |
atgctgtaatgatagaaaatttgagtcatgaatttatgtttaccaagtccactcttcatgtgtttgtattgatagatattttagaaaagtcaaaggatat |
15695202 |
T |
|
| Q |
301 |
tatt |
304 |
Q |
| |
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|||| |
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| T |
15695203 |
tatt |
15695206 |
T |
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