View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10399_4 (Length: 443)
Name: NF10399_4
Description: NF10399
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10399_4 |
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Alignment Details
Target: chr7 (Bit Score: 395; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 8 - 426
Target Start/End: Original strand, 21483647 - 21484065
Alignment:
| Q |
8 |
gagaggtgtttgatctagccatgatgtttggttgaaacacgtgttcgattcaggtgcaaatgtgtttgctgtgttttggttctgacacggatcttgaaaa |
107 |
Q |
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||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21483647 |
gagaggtgtttgatctagccatgatgtttggttgaaacatgcgttcgattcaggtgcaaatgtgtttgctgtgttttggttctgacacggatcttgaaaa |
21483746 |
T |
|
| Q |
108 |
tgttgttgttgaggaacaatatttgaaggtattattgtgttcgtgttggcgttttctttgagtcttttgttgtgaagatgactagtttgaacccattcaa |
207 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
21483747 |
tgatgttgttgaggaacaatatttgaaggtattattgtgttcgtgttggcgttttctttgagtcttttgttatgaagatgactagtttgaacccattcaa |
21483846 |
T |
|
| Q |
208 |
gaatgagcttcaacaattgtttcatcccttcttttccaccacctaatctcctagcagcactttcgatcgtcgatttcttaagcttcacattcctcaaatc |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
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| T |
21483847 |
gaatgagcttcaacaattgtttcatcccttcttttccaccacctaatctcctagcagcactttcaatcgttgatttcttaagcttcacattcctcaaatc |
21483946 |
T |
|
| Q |
308 |
attcgcggagacactgtctttgttcgatttaagccactccaagaaaaccatactcatttcatcacttacaccatcacatgcacctaattcatctccttga |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21483947 |
attcgcggagacactgtctttgttcgatttaagccactccaagaaaaccatactcatttcatcacttacaccatcacatgcacctaattcatctccttga |
21484046 |
T |
|
| Q |
408 |
atactctcttccccattta |
426 |
Q |
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||||||||||||||||||| |
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| T |
21484047 |
atactctcttccccattta |
21484065 |
T |
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