View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1040-Insertion-2 (Length: 659)

Name: NF1040-Insertion-2
Description: NF1040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1040-Insertion-2
NF1040-Insertion-2
[»] chr8 (54 HSPs)
chr8 (8-557)||(22756144-22756709)
chr8 (203-366)||(15001481-15001644)
chr8 (219-385)||(29563169-29563335)
chr8 (229-385)||(29672276-29672432)
chr8 (172-385)||(6386572-6386790)
chr8 (203-385)||(8672982-8673164)
chr8 (229-385)||(16595103-16595258)
chr8 (265-372)||(3800932-3801039)
chr8 (203-366)||(37664210-37664373)
chr8 (229-366)||(10467079-10467216)
chr8 (213-366)||(29610992-29611145)
chr8 (229-385)||(4052476-4052632)
chr8 (229-365)||(30501161-30501297)
chr8 (229-385)||(32019954-32020110)
chr8 (229-385)||(34101504-34101660)
chr8 (229-385)||(41709773-41709929)
chr8 (203-366)||(7591374-7591537)
chr8 (231-386)||(14004999-14005154)
chr8 (580-659)||(22756698-22756777)
chr8 (226-385)||(27103955-27104114)
chr8 (229-385)||(34063124-34063280)
chr8 (182-385)||(45446451-45446659)
chr8 (203-357)||(41548642-41548796)
chr8 (229-366)||(35225677-35225814)
chr8 (229-366)||(37618345-37618482)
chr8 (229-366)||(39642898-39643035)
chr8 (229-365)||(7394767-7394903)
chr8 (229-365)||(17805707-17805843)
chr8 (229-365)||(30542975-30543111)
chr8 (226-366)||(37861874-37862014)
chr8 (203-365)||(12753252-12753414)
chr8 (219-385)||(31513526-31513692)
chr8 (221-362)||(54189-54330)
chr8 (229-378)||(10932739-10932887)
chr8 (229-365)||(3251609-3251745)
chr8 (229-385)||(25478239-25478395)
chr8 (229-366)||(13406888-13407025)
chr8 (260-385)||(31732060-31732185)
chr8 (229-309)||(37474772-37474852)
chr8 (213-363)||(9624237-9624384)
chr8 (203-365)||(5968791-5968953)
chr8 (229-366)||(22999272-22999410)
chr8 (229-347)||(40389074-40389192)
chr8 (218-357)||(10320221-10320358)
chr8 (231-357)||(10656641-10656767)
chr8 (283-385)||(32303592-32303694)
chr8 (260-377)||(36426231-36426348)
chr8 (210-372)||(5892077-5892239)
chr8 (229-366)||(45114070-45114207)
chr8 (278-366)||(21272699-21272787)
chr8 (322-385)||(5859518-5859581)
chr8 (213-267)||(33742559-33742613)
chr8 (229-366)||(16485762-16485899)
chr8 (322-386)||(11944870-11944934)
[»] chr4 (90 HSPs)
chr4 (203-385)||(20802436-20802618)
chr4 (261-404)||(52673791-52673934)
chr4 (227-367)||(9947946-9948086)
chr4 (229-366)||(12600904-12601041)
chr4 (229-366)||(38812538-38812675)
chr4 (182-385)||(33552721-33552929)
chr4 (203-385)||(23521879-23522061)
chr4 (229-366)||(47642422-47642559)
chr4 (229-366)||(50729473-50729610)
chr4 (229-366)||(52949738-52949875)
chr4 (229-365)||(33176963-33177099)
chr4 (229-365)||(50727844-50727980)
chr4 (229-365)||(50735858-50735994)
chr4 (231-366)||(44649097-44649232)
chr4 (203-385)||(56154620-56154802)
chr4 (229-366)||(21202757-21202894)
chr4 (229-366)||(24002357-24002494)
chr4 (229-365)||(2629882-2630018)
chr4 (229-365)||(3649655-3649791)
chr4 (229-385)||(29785468-29785624)
chr4 (229-385)||(38486188-38486344)
chr4 (231-366)||(21580044-21580179)
chr4 (219-385)||(55065253-55065420)
chr4 (226-356)||(52319351-52319481)
chr4 (182-366)||(4325809-4325998)
chr4 (229-366)||(24210337-24210474)
chr4 (229-386)||(36743619-36743776)
chr4 (229-366)||(37865771-37865908)
chr4 (229-385)||(44355786-44355942)
chr4 (229-358)||(46680441-46680570)
chr4 (229-357)||(1231338-1231466)
chr4 (229-385)||(2725064-2725219)
chr4 (182-385)||(36885931-36886139)
chr4 (284-388)||(43893573-43893677)
chr4 (203-366)||(50178397-50178561)
chr4 (231-366)||(16320537-16320672)
chr4 (203-366)||(36497235-36497398)
chr4 (229-366)||(42869992-42870126)
chr4 (229-386)||(20517953-20518110)
chr4 (229-366)||(32181281-32181418)
chr4 (229-366)||(44324273-44324410)
chr4 (229-385)||(9512271-9512427)
chr4 (229-365)||(22318315-22318451)
chr4 (229-365)||(39078680-39078816)
chr4 (229-333)||(42772839-42772943)
chr4 (213-385)||(49152015-49152186)
chr4 (203-329)||(11056097-11056223)
chr4 (229-355)||(26083368-26083494)
chr4 (315-385)||(40792416-40792486)
chr4 (229-366)||(28115270-28115406)
chr4 (229-366)||(41711865-41712002)
chr4 (229-357)||(37695472-37695600)
chr4 (229-388)||(20694367-20694526)
chr4 (219-365)||(43189684-43189829)
chr4 (231-365)||(55593904-55594038)
chr4 (213-290)||(44640417-44640494)
chr4 (229-366)||(50186546-50186683)
chr4 (229-385)||(53200574-53200731)
chr4 (203-333)||(47361319-47361448)
chr4 (311-394)||(153776-153859)
chr4 (229-355)||(2786993-2787119)
chr4 (229-355)||(6776607-6776733)
chr4 (255-333)||(7001903-7001981)
chr4 (229-291)||(14296660-14296722)
chr4 (229-291)||(14314908-14314970)
chr4 (229-355)||(29592924-29593050)
chr4 (231-365)||(31445811-31445943)
chr4 (224-372)||(3579136-3579285)
chr4 (229-365)||(29616189-29616321)
chr4 (229-290)||(56487213-56487274)
chr4 (278-386)||(41897338-41897446)
chr4 (229-365)||(54543009-54543144)
chr4 (278-385)||(43641098-43641205)
chr4 (227-364)||(45577617-45577758)
chr4 (309-383)||(7381278-7381352)
chr4 (229-355)||(7554888-7555014)
chr4 (219-385)||(20644162-20644328)
chr4 (205-347)||(25978519-25978660)
chr4 (274-404)||(37859235-37859365)
chr4 (229-366)||(9807174-9807310)
chr4 (219-365)||(30942807-30942954)
chr4 (195-250)||(34559215-34559270)
chr4 (229-366)||(34929933-34930070)
chr4 (324-377)||(41720850-41720903)
chr4 (283-365)||(23327937-23328020)
chr4 (229-331)||(6973844-6973946)
chr4 (219-357)||(10587062-10587200)
chr4 (314-371)||(47741281-47741338)
chr4 (181-249)||(7085189-7085257)
chr4 (278-386)||(43739459-43739567)
[»] scaffold0650 (1 HSPs)
scaffold0650 (229-366)||(1587-1724)
[»] scaffold0027 (1 HSPs)
scaffold0027 (229-385)||(15168-15324)
[»] chr6 (48 HSPs)
chr6 (229-385)||(7396103-7396258)
chr6 (229-385)||(3259679-3259835)
chr6 (229-385)||(11279124-11279280)
chr6 (219-385)||(27824620-27824783)
chr6 (229-366)||(10960015-10960152)
chr6 (229-365)||(10324088-10324224)
chr6 (229-385)||(17867831-17867987)
chr6 (229-385)||(17877614-17877770)
chr6 (229-366)||(166900-167037)
chr6 (182-366)||(17443277-17443461)
chr6 (229-365)||(24203378-24203514)
chr6 (229-385)||(24242660-24242816)
chr6 (205-385)||(32409805-32409985)
chr6 (181-385)||(2614892-2615101)
chr6 (229-385)||(11382060-11382214)
chr6 (229-365)||(9902635-9902771)
chr6 (227-385)||(15276912-15277070)
chr6 (229-355)||(18597135-18597261)
chr6 (229-366)||(10485172-10485309)
chr6 (229-366)||(32132357-32132494)
chr6 (229-365)||(3932784-3932920)
chr6 (226-362)||(29054375-29054511)
chr6 (203-385)||(11613742-11613924)
chr6 (229-366)||(3379725-3379862)
chr6 (229-366)||(15277257-15277394)
chr6 (229-365)||(32860067-32860203)
chr6 (229-385)||(34176826-34176982)
chr6 (183-365)||(9613990-9614177)
chr6 (229-366)||(14925433-14925570)
chr6 (229-386)||(35004105-35004262)
chr6 (229-365)||(11212273-11212409)
chr6 (229-366)||(31870074-31870214)
chr6 (213-404)||(2122700-2122892)
chr6 (226-366)||(18057534-18057674)
chr6 (229-358)||(4494091-4494221)
chr6 (213-309)||(9200348-9200445)
chr6 (229-358)||(11675351-11675480)
chr6 (337-384)||(29424652-29424699)
chr6 (184-365)||(8177809-8177994)
chr6 (260-355)||(34683993-34684086)
chr6 (229-308)||(10552818-10552897)
chr6 (205-290)||(2122902-2122987)
chr6 (262-385)||(3290668-3290789)
chr6 (307-355)||(23636249-23636297)
chr6 (297-357)||(1004471-1004527)
chr6 (219-265)||(8342584-8342630)
chr6 (173-206)||(5526325-5526358)
chr6 (343-383)||(14502678-14502718)
[»] chr3 (60 HSPs)
chr3 (181-357)||(34351252-34351428)
chr3 (229-385)||(29584872-29585028)
chr3 (229-385)||(34026664-34026820)
chr3 (182-386)||(21221241-21221449)
chr3 (229-366)||(21373946-21374083)
chr3 (229-385)||(28675787-28675943)
chr3 (229-385)||(44000258-44000414)
chr3 (229-385)||(44116936-44117092)
chr3 (203-366)||(19906778-19906941)
chr3 (226-385)||(20609577-20609736)
chr3 (229-358)||(25860353-25860482)
chr3 (182-366)||(33364658-33364847)
chr3 (229-385)||(1344639-1344795)
chr3 (229-365)||(38213371-38213507)
chr3 (229-385)||(40094500-40094656)
chr3 (203-366)||(24571297-24571460)
chr3 (229-366)||(2135086-2135223)
chr3 (229-366)||(31882954-31883091)
chr3 (229-385)||(12349103-12349259)
chr3 (229-365)||(39052770-39052906)
chr3 (229-365)||(42636335-42636471)
chr3 (229-365)||(51259712-51259848)
chr3 (226-385)||(53557724-53557883)
chr3 (229-367)||(50678813-50678951)
chr3 (229-366)||(3864607-3864744)
chr3 (229-385)||(47958364-47958520)
chr3 (229-365)||(49748843-49748979)
chr3 (227-365)||(25927257-25927395)
chr3 (229-366)||(3867581-3867718)
chr3 (229-366)||(29646082-29646219)
chr3 (229-366)||(50386388-50386525)
chr3 (229-366)||(51296597-51296734)
chr3 (182-385)||(4851343-4851544)
chr3 (203-291)||(41682959-41683047)
chr3 (203-366)||(3964304-3964467)
chr3 (229-365)||(20255062-20255197)
chr3 (229-347)||(51925140-51925258)
chr3 (229-366)||(24721501-24721638)
chr3 (260-385)||(26282350-26282475)
chr3 (227-364)||(28624851-28624987)
chr3 (260-404)||(36771998-36772140)
chr3 (232-366)||(22484678-22484812)
chr3 (298-404)||(14155461-14155569)
chr3 (229-386)||(30043765-30043920)
chr3 (231-366)||(54622731-54622865)
chr3 (232-365)||(39215404-39215537)
chr3 (314-386)||(3695309-3695381)
chr3 (341-385)||(16145865-16145909)
chr3 (329-385)||(19190660-19190716)
chr3 (231-291)||(53046605-53046665)
chr3 (294-369)||(19190714-19190788)
chr3 (229-364)||(45690838-45690968)
chr3 (317-362)||(42547390-42547435)
chr3 (203-291)||(3695213-3695301)
chr3 (219-291)||(30258963-30259035)
chr3 (324-371)||(39079222-39079269)
chr3 (226-365)||(52300454-52300592)
chr3 (229-358)||(26847350-26847480)
chr3 (316-385)||(5442288-5442357)
chr3 (203-291)||(10747291-10747379)
[»] chr1 (67 HSPs)
chr1 (229-385)||(28340316-28340472)
chr1 (231-366)||(41967864-41967999)
chr1 (182-366)||(51264519-51264708)
chr1 (229-385)||(844737-844893)
chr1 (229-385)||(6711059-6711215)
chr1 (229-385)||(12890243-12890399)
chr1 (229-385)||(16386859-16387015)
chr1 (229-385)||(35387324-35387480)
chr1 (229-385)||(45490888-45491044)
chr1 (226-385)||(16451132-16451291)
chr1 (226-385)||(16704731-16704890)
chr1 (229-388)||(32289357-32289516)
chr1 (229-366)||(1351448-1351585)
chr1 (229-365)||(6029314-6029450)
chr1 (229-385)||(30105693-30105849)
chr1 (203-367)||(31004155-31004319)
chr1 (229-372)||(2761569-2761712)
chr1 (226-385)||(16437367-16437526)
chr1 (203-385)||(7183923-7184105)
chr1 (165-365)||(41972936-41973141)
chr1 (182-366)||(42512731-42512920)
chr1 (229-366)||(50540368-50540505)
chr1 (229-365)||(17887973-17888109)
chr1 (229-385)||(32270358-32270514)
chr1 (203-366)||(13994062-13994225)
chr1 (229-366)||(50304675-50304812)
chr1 (229-385)||(26118228-26118384)
chr1 (229-385)||(42510530-42510686)
chr1 (229-366)||(16476168-16476305)
chr1 (229-365)||(17327662-17327798)
chr1 (205-365)||(39281919-39282079)
chr1 (226-365)||(6143996-6144135)
chr1 (213-372)||(26733573-26733732)
chr1 (229-366)||(24339651-24339789)
chr1 (229-385)||(1601178-1601332)
chr1 (269-385)||(46447669-46447785)
chr1 (211-385)||(504386-504560)
chr1 (181-331)||(3560115-3560265)
chr1 (231-357)||(17291612-17291737)
chr1 (229-371)||(44738055-44738197)
chr1 (229-365)||(50382413-50382552)
chr1 (229-365)||(26764808-26764944)
chr1 (229-365)||(49303367-49303503)
chr1 (224-301)||(4895450-4895527)
chr1 (229-362)||(5109756-5109889)
chr1 (233-366)||(45658845-45658978)
chr1 (229-365)||(15539903-15540039)
chr1 (229-372)||(7837151-7837294)
chr1 (229-372)||(47242529-47242671)
chr1 (229-355)||(10384402-10384528)
chr1 (229-367)||(11772645-11772783)
chr1 (300-365)||(40856172-40856237)
chr1 (229-365)||(51703177-51703312)
chr1 (229-384)||(6771374-6771529)
chr1 (172-301)||(7146849-7146983)
chr1 (226-291)||(8838996-8839061)
chr1 (230-386)||(570390-570549)
chr1 (278-366)||(25539879-25539967)
chr1 (341-377)||(52030330-52030366)
chr1 (384-418)||(6771322-6771356)
chr1 (316-366)||(33316441-33316491)
chr1 (314-385)||(34283914-34283987)
chr1 (425-462)||(2761795-2761832)
chr1 (296-357)||(38663165-38663226)
chr1 (327-372)||(51374424-51374469)
chr1 (210-290)||(7837474-7837554)
chr1 (203-355)||(38086983-38087135)
[»] chr5 (50 HSPs)
chr5 (227-377)||(17031161-17031311)
chr5 (229-385)||(35701273-35701429)
chr5 (175-365)||(4689583-4689778)
chr5 (229-386)||(21739105-21739262)
chr5 (229-385)||(7523168-7523324)
chr5 (229-385)||(32528711-32528867)
chr5 (260-367)||(24206385-24206492)
chr5 (228-366)||(22432252-22432390)
chr5 (229-365)||(553413-553549)
chr5 (229-365)||(2351696-2351832)
chr5 (229-385)||(11963337-11963493)
chr5 (229-385)||(31770535-31770691)
chr5 (182-385)||(6284192-6284399)
chr5 (229-366)||(31644461-31644597)
chr5 (230-366)||(4818085-4818221)
chr5 (229-365)||(7770223-7770359)
chr5 (229-365)||(8136853-8136989)
chr5 (229-357)||(23091248-23091376)
chr5 (229-365)||(28090464-28090600)
chr5 (226-366)||(34794902-34795042)
chr5 (229-365)||(39918523-39918659)
chr5 (219-365)||(18470362-18470508)
chr5 (229-366)||(7208174-7208311)
chr5 (205-365)||(700521-700681)
chr5 (229-365)||(41790407-41790542)
chr5 (231-365)||(39788209-39788343)
chr5 (229-366)||(24181568-24181705)
chr5 (229-366)||(31880020-31880157)
chr5 (213-357)||(5598504-5598648)
chr5 (194-309)||(36174993-36175108)
chr5 (182-386)||(40489332-40489540)
chr5 (231-357)||(41459613-41459738)
chr5 (229-366)||(22493363-22493500)
chr5 (229-366)||(27839018-27839154)
chr5 (213-365)||(8560910-8561062)
chr5 (203-354)||(7725727-7725878)
chr5 (203-365)||(24036246-24036408)
chr5 (229-366)||(32092926-32093062)
chr5 (229-365)||(3735373-3735509)
chr5 (258-366)||(5571617-5571725)
chr5 (181-337)||(14011149-14011305)
chr5 (229-385)||(29241374-29241530)
chr5 (213-365)||(26180222-26180375)
chr5 (229-301)||(37148533-37148605)
chr5 (219-289)||(4664923-4664993)
chr5 (263-342)||(5673178-5673257)
chr5 (229-383)||(11090812-11090965)
chr5 (296-366)||(40182479-40182549)
chr5 (230-291)||(35955089-35955150)
chr5 (211-251)||(29788376-29788416)
[»] chr2 (54 HSPs)
chr2 (229-385)||(9732868-9733024)
chr2 (229-385)||(44284625-44284781)
chr2 (229-365)||(7258913-7259049)
chr2 (229-385)||(7761511-7761667)
chr2 (229-385)||(35114781-35114937)
chr2 (229-385)||(37308651-37308807)
chr2 (229-385)||(42706355-42706511)
chr2 (213-352)||(38623226-38623365)
chr2 (229-366)||(3913398-3913535)
chr2 (229-385)||(17540710-17540867)
chr2 (229-366)||(38993009-38993146)
chr2 (229-365)||(42365593-42365729)
chr2 (226-385)||(19513624-19513783)
chr2 (226-365)||(41366045-41366184)
chr2 (213-367)||(40832391-40832545)
chr2 (229-385)||(5278772-5278928)
chr2 (229-385)||(34338806-34338962)
chr2 (229-385)||(16104270-16104426)
chr2 (229-357)||(18685860-18685988)
chr2 (229-385)||(30326270-30326425)
chr2 (229-365)||(33366626-33366762)
chr2 (229-365)||(33889259-33889395)
chr2 (203-366)||(6896183-6896346)
chr2 (229-366)||(2645025-2645161)
chr2 (229-366)||(12672412-12672549)
chr2 (229-385)||(30798426-30798583)
chr2 (176-355)||(10399750-10399934)
chr2 (229-365)||(32497931-32498067)
chr2 (229-365)||(32766442-32766579)
chr2 (231-358)||(15303180-15303307)
chr2 (229-364)||(16177821-16177956)
chr2 (229-366)||(28824495-28824632)
chr2 (229-333)||(8112348-8112452)
chr2 (258-365)||(13829454-13829561)
chr2 (229-402)||(2394249-2394421)
chr2 (331-404)||(82881-82953)
chr2 (205-365)||(30712872-30713036)
chr2 (297-385)||(9717220-9717308)
chr2 (233-365)||(41934597-41934729)
chr2 (229-385)||(39461310-39461466)
chr2 (229-363)||(26981647-26981781)
chr2 (229-385)||(26796225-26796380)
chr2 (307-382)||(18127004-18127079)
chr2 (258-367)||(11114886-11114995)
chr2 (269-386)||(26418918-26419035)
chr2 (269-362)||(36843481-36843574)
chr2 (296-365)||(37003873-37003942)
chr2 (269-365)||(12939278-12939374)
chr2 (194-358)||(35472903-35473067)
chr2 (229-357)||(40692321-40692449)
chr2 (226-330)||(40876559-40876663)
chr2 (229-331)||(27462740-27462842)
chr2 (229-274)||(37863304-37863349)
chr2 (314-366)||(4641531-4641583)
[»] chr7 (64 HSPs)
chr7 (172-366)||(36769446-36769645)
chr7 (229-366)||(21784890-21785027)
chr7 (229-385)||(3922642-3922798)
chr7 (229-385)||(10932496-10932652)
chr7 (229-385)||(47953190-47953346)
chr7 (219-370)||(21408556-21408706)
chr7 (226-385)||(40753155-40753314)
chr7 (182-366)||(44748714-44748903)
chr7 (183-366)||(1363655-1363843)
chr7 (229-365)||(30598947-30599083)
chr7 (226-385)||(11321821-11321980)
chr7 (229-366)||(329489-329626)
chr7 (229-366)||(41211139-41211276)
chr7 (229-357)||(38301371-38301498)
chr7 (229-385)||(43158625-43158781)
chr7 (229-385)||(47316637-47316793)
chr7 (181-385)||(32873658-32873864)
chr7 (229-367)||(26910349-26910487)
chr7 (229-366)||(26994164-26994301)
chr7 (229-366)||(43368220-43368357)
chr7 (229-357)||(1870163-1870291)
chr7 (227-371)||(2048965-2049109)
chr7 (229-385)||(18386525-18386680)
chr7 (229-385)||(26371748-26371904)
chr7 (227-366)||(21133391-21133530)
chr7 (229-366)||(29661342-29661479)
chr7 (230-366)||(22724471-22724607)
chr7 (203-367)||(34519526-34519690)
chr7 (229-385)||(46633697-46633848)
chr7 (181-355)||(37967004-37967183)
chr7 (229-372)||(43189181-43189324)
chr7 (229-365)||(18470704-18470838)
chr7 (273-385)||(29992677-29992789)
chr7 (226-365)||(30849182-30849321)
chr7 (229-347)||(16963176-16963294)
chr7 (219-365)||(48445541-48445687)
chr7 (229-364)||(23349230-23349365)
chr7 (229-355)||(17237106-17237232)
chr7 (229-366)||(22723971-22724108)
chr7 (219-366)||(34295340-34295480)
chr7 (229-366)||(43213864-43214001)
chr7 (281-366)||(48699417-48699502)
chr7 (229-333)||(11250669-11250773)
chr7 (229-333)||(11822275-11822379)
chr7 (314-366)||(41665599-41665651)
chr7 (229-364)||(20127310-20127445)
chr7 (229-355)||(48894747-48894873)
chr7 (296-367)||(46627188-46627259)
chr7 (324-385)||(47383754-47383815)
chr7 (258-366)||(3891994-3892102)
chr7 (229-365)||(9913545-9913680)
chr7 (229-365)||(9927233-9927368)
chr7 (255-391)||(42332053-42332189)
chr7 (321-385)||(47947760-47947824)
chr7 (314-373)||(8054400-8054459)
chr7 (324-378)||(7958633-7958687)
chr7 (296-366)||(26652885-26652955)
chr7 (278-356)||(29372767-29372845)
chr7 (318-388)||(38360068-38360138)
chr7 (229-355)||(46448583-46448709)
chr7 (229-290)||(26700572-26700633)
chr7 (278-367)||(35645465-35645553)
chr7 (321-382)||(42073029-42073090)
chr7 (224-292)||(35026362-35026430)
[»] scaffold0208 (1 HSPs)
scaffold0208 (229-372)||(2282-2425)
[»] scaffold0169 (2 HSPs)
scaffold0169 (229-385)||(17998-18154)
scaffold0169 (278-385)||(12529-12636)
[»] scaffold0054 (2 HSPs)
scaffold0054 (229-365)||(23591-23727)
scaffold0054 (219-385)||(19903-20069)
[»] scaffold0050 (1 HSPs)
scaffold0050 (229-366)||(42894-43030)
[»] scaffold0025 (1 HSPs)
scaffold0025 (229-365)||(5383-5520)
[»] scaffold0098 (1 HSPs)
scaffold0098 (229-385)||(51435-51590)
[»] scaffold0014 (1 HSPs)
scaffold0014 (219-366)||(101964-102111)
[»] scaffold0004 (1 HSPs)
scaffold0004 (227-365)||(372906-373044)
[»] scaffold0280 (1 HSPs)
scaffold0280 (229-366)||(13631-13768)
[»] scaffold0181 (1 HSPs)
scaffold0181 (229-365)||(19036-19170)
[»] scaffold0062 (1 HSPs)
scaffold0062 (219-385)||(3556-3728)
[»] scaffold0360 (2 HSPs)
scaffold0360 (229-366)||(15317-15462)
scaffold0360 (320-385)||(13614-13679)
[»] scaffold0047 (1 HSPs)
scaffold0047 (219-338)||(19090-19209)
[»] scaffold0729 (1 HSPs)
scaffold0729 (229-355)||(4523-4649)
[»] scaffold0957 (1 HSPs)
scaffold0957 (229-366)||(2440-2576)
[»] scaffold0406 (1 HSPs)
scaffold0406 (295-377)||(13059-13142)
[»] scaffold0155 (1 HSPs)
scaffold0155 (294-383)||(33553-33642)
[»] scaffold0021 (1 HSPs)
scaffold0021 (219-365)||(108239-108385)
[»] scaffold0595 (1 HSPs)
scaffold0595 (219-265)||(6876-6922)


Alignment Details
Target: chr8 (Bit Score: 394; Significance: 0; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 8 - 557
Target Start/End: Original strand, 22756144 - 22756709
Alignment:
Q  8 atataattaacaaattttggttatggtctttctataaatttcataggtcttaattccttcacatatnnnnnnncttggaagtgcagtgatattattatga 107  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||        |||||| |||||||||||||||||||    
T  22756144 atataattaacaaattttggttatggtctt-ctataaatttcataggtctttattccttcacatataaaaaaaattggaaatgcagtgatattattatga 22756242  T
Q  108 ttttctggttttgttcaagttttctggttttgtaccggtttgctgtgtattgtgcatttgttcccttagggtttgtttgatctgctaaaaaataaaggac 207  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  22756243 ttttctggttttgttcaagttttctggttttgtaccggtttgctatgtattgtgcatttgttcccttagggtgtgtttgatctgctaaaaaatgaaggac 22756342  T
Q  208 aaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccct 307  Q
    |||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22756343 aaaacaactccagttatacaatgtttgatttgtaaaactgtttctgggataggacaaatttgaggcaagagacaagacaaaaacataaatttttatccct 22756442  T
Q  308 cattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaattattcaataccataaaagtaag 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||    
T  22756443 cattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccaccaaaaattattcaatactatagaagtaag 22756542  T
Q  408 tttgtcgtgtgcggttttgtccggtacatgttgtttagcaaatcaaacacaccttgagttttggttgcatagtt--------------------aaggtt 487  Q
    |||||||||||| ||| ||||||||| |   |||||||||||||||||||||||||||||||||||||||||||                    ||| ||    
T  22756543 tttgtcgtgtgcagttctgtccggtata---tgtttagcaaatcaaacacaccttgagttttggttgcatagttaagtacgtgttgtttggaacaagttt 22756639  T
Q  488 cacaggaatatgatgaataataaataaatctaatattttctttccatttggcttgggagtggttaaagtt 557  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22756640 cacaggaatatgatgaataataaataaatctaatattttctttccatttggcttgggagtggttaaagtt 22756709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 203 - 366
Target Start/End: Complemental strand, 15001644 - 15001481
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    |||||| || ||||| |||| | || ||||||||||||||||||||||| |||| |||||||||| ||||||| |||||  ||||||||  ||||||||     
T  15001644 aggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacaggacaaactggaggcaatagacagaacaaaaactgaaatttttg 15001545  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||||  | ||||||||||||||||||||  ||||||||||||||||||||||| |||||||    
T  15001544 tccctcaccaaaccacaacacaactttttgtcccacgtacaagttatctaaaataccaaaatag 15001481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 219 - 385
Target Start/End: Original strand, 29563169 - 29563335
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccac 318  Q
    |||||| || ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||    
T  29563169 agttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactcgaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccac 29563268  T
Q  319 aacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||||||||||||  |||||||||||| |||||||||| |||||||| |||| ||| ||||||||    
T  29563269 aacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaat 29563335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 29672276 - 29672432
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||| ||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  29672276 tgtttgattcgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 29672375  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  ||||||||||||||||||||||| |||||||  |||| ||| ||||||||    
T  29672376 tttgtcccacgtacaagttatctaaaataccaaaatagcattttgtccctcaaaaat 29672432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 172 - 385
Target Start/End: Complemental strand, 6386790 - 6386572
Alignment:
Q  172 cttagggtttgtttgatctgctaaaaaataaaggacaaaata-----acttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaac 266  Q
    ||||||||  ||||||| ||||||||||| |||||||||| |     |||  |||| | || |||||||||| |||||||||||| || |||||||||||    
T  6386790 cttagggtgcgtttgatttgctaaaaaatgaaggacaaaacataacaactgtagttgtccagtgtttgatttataaaactgtttcaggtataggacaaac 6386691  T
Q  267 ttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    | |||| || ||| | |||||||||  | |||||| |||||||  | |||||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  6386690 tggaggtaaaagataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatag 6386591  T
Q  367 ttttttatccatcaaaaat 385  Q
      |||| ||| ||||||||    
T  6386590 cattttgtccctcaaaaat 6386572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 203 - 385
Target Start/End: Original strand, 8672982 - 8673164
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    ||||||||| ||||  |||| | || ||||||||||||||||||||||| || | | |||||||| |||||||| |||| |||||||||  | ||||||     
T  8672982 aggacaaaacaactatagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttg 8673081  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||||  | ||||||||||||||||||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  8673082 tccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 8673164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 16595103 - 16595258
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||  ||||||||||| || |||||||  ||||||| |||| ||||||||||| || |||| ||||||  ||  ||||||||||||||    
T  16595103 tgtttgatttgtaaat-tgtttctgggacagaacaaactgtaggcaagggacaggacaaaaacatgaagttttgtccctcgctaatccacaacacaactt 16595201  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  ||||||||||||||||||||||||||||||| ||||| | || |||||||    
T  16595202 tttgtcccacgtacaagttatctaaaatacaaaaatagctttttgttcaccaaaaat 16595258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 265 - 372
Target Start/End: Original strand, 3800932 - 3801039
Alignment:
Q  265 acttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaat 364  Q
    |||| ||||||| |||||||||||||||||| ||||| | |||||||| |||||| ||||||||||||| |||| ||| |||||||||||||||||||||    
T  3800932 acttaaggcaagggacaagacaaaaacataagtttttgttcctcattaaaccacatcacaactttttgtttcacatactagttatctaaaatacaaaaat 3801031  T
Q  365 agtttttt 372  Q
    ||||||||    
T  3801032 agtttttt 3801039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 203 - 366
Target Start/End: Original strand, 37664210 - 37664373
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    |||||| |||||||  |||| | || ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | ||||||     
T  37664210 aggacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttg 37664309  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||||  | |||||| |||||||||||||  |||||||||||| |||||||||| |||||||    
T  37664310 tccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 37664373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 10467216 - 10467079
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||  || | |||||||||| |||||||||||||||||||||||  | |||||| | |||||  | |||||||||||||||    
T  10467216 tgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagagacaagacaaaaactgatatttttgttcctcagcaaaccacaacacaactt 10467117  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||  |||||||    
T  10467116 tttgtcccacgtacaagttgtctaaaatatcaaaatag 10467079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 213 - 366
Target Start/End: Original strand, 29610992 - 29611145
Alignment:
Q  213 aacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcatta 312  Q
    ||||| |||| | |||||||||||||||||||||||||| |||| || ||||||| |||||||| |||| |||||||||  |||||||| ||||||   |    
T  29610992 aacttcagttgtccaatgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacaggacaaaaactgaaatttttgtccctcgcca 29611091  T
Q  313 taccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
     ||||||||||||||||||||  |||||| ||||| ||||||| || |||||||    
T  29611092 aaccacaacacaactttttgtcccacgtaaaagttgtctaaaacaccaaaatag 29611145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 4052632 - 4052476
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||| | |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  4052632 tgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 4052533  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  4052532 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 4052476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 30501297 - 30501161
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||| |||| |||||||||| | |||||| |||||||  | |||||| ||||||||    
T  30501297 tgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaacacatatttttgtccctcaccaaaccacagcacaactt 30501198  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  ||||||||||||  ||||||||||||||||    
T  30501197 tttgtcccacgtacaagttgcctaaaatacaaaaata 30501161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 32019954 - 32020110
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| || ||||| |  | |||||||||  | ||||||||||||||  | |||||| ||||||||    
T  32019954 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaagcaaggggtaggacaaaaactcatatttttatccctcaccaaaccacagcacaactt 32020053  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||| |||| ||| ||||||||    
T  32020054 tttgttccacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaat 32020110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 34101660 - 34101504
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| ||||| ||||||||  | |||||| |||||||  | ||||||||| |||||    
T  34101660 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaacacaaaaactcatatttttgtccctcaccaaaccacaacataactt 34101561  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||| |  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  34101560 ttttttccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 34101504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 41709929 - 41709773
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||  |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  41709929 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaatgacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 41709830  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||   |||||||||||||||||||||| |||||||  |||| ||| ||||||||    
T  41709829 tttgtccaacgtacaagttatctaaaataccaaaatagcattttgtccctcaaaaat 41709773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 203 - 366
Target Start/End: Original strand, 7591374 - 7591537
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    |||||| || ||||| |||| | || ||||||||||||||||||||||| || | |||||||||| ||||||||||||| |||||||||  | ||||||     
T  7591374 aggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttg 7591473  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    | |||||  | ||||||||||||||||||||  |||||| ||||| |||||||||  |||||||    
T  7591474 tgcctcagcaaaccacaacacaactttttgtcacacgtataagttgtctaaaatatcaaaatag 7591537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 231 - 386
Target Start/End: Original strand, 14004999 - 14005154
Alignment:
Q  231 tttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttt 330  Q
    ||||||||||||||||||||  || | |||||||||| |||||||| ||||||||||||||  | |||||| ||| |||  | |||||||||||||||||    
T  14004999 tttgatttgtaaaactgtttgaggtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgtccatcaccaaaccacaacacaactttt 14005098  T
Q  331 tgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaatt 386  Q
    |||  |||||||||||| |||||||||| ||||||   |||| ||||| |||||||    
T  14005099 tgtcccacgtacaagttgtctaaaataccaaaataacattttgtccataaaaaatt 14005154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 580 - 659
Target Start/End: Original strand, 22756698 - 22756777
Alignment:
Q  580 gtggttaaagttgattgacatggcaaaattgatagaatattagagactgaatttctttattgtgtactgtatactggaaa 659  Q
    |||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  22756698 gtggttaaagttaattaacatggcaaaattgatagaatataagagactgaatttctttagtgtgtactgtatactggaaa 22756777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 226 - 385
Target Start/End: Complemental strand, 27104114 - 27103955
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||  |||||    
T  27104114 caatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccactgcacaa 27104015  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||||||  |||||||||||| |||||||||  |||||||  |||| ||| ||||||||    
T  27104014 ctttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaaaat 27103955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 34063280 - 34063124
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||| |||| || | |||||||||| |||||||| |||| |||||||||  | |||||| ||||||   | |||||| ||||||||    
T  34063280 tgtttgatttgtaaaactctttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcgccaaaccacagcacaactt 34063181  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  34063180 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 34063124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 182 - 385
Target Start/End: Complemental strand, 45446659 - 45446451
Alignment:
Q  182 gtttgatctgctaaaaaataaag-----gacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaag 276  Q
    ||||||| ||||||||||| |||     ||||||||||||  |||| | || ||||||||||||||||||||||| || | | |||||||| ||||||||    
T  45446659 gtttgatttgctaaaaaatgaaggataagacaaaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacacgacaaactggaggcaag 45446560  T
Q  277 agacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatcc 376  Q
     |||| || ||||||  | |||||| | |||||  | |||||| |||||||||||||  |||||||||||| |||||||||| |||||||  |||| |||    
T  45446559 ggacaggataaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 45446460  T
Q  377 atcaaaaat 385  Q
     ||||||||    
T  45446459 ctcaaaaat 45446451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 203 - 357
Target Start/End: Complemental strand, 41548796 - 41548642
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    |||||| || ||||| |||| | || ||||||||||||||||||||||| |  | | |||||||| ||||||||||||| |||||||||  | ||||||     
T  41548796 aggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagatacatgacaaactggaggcaagagacaggacaaaaactgatatttttg 41548697  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaata 357  Q
    | |||||  | ||||||||||||||||||||  |||||||||||| |||||||||    
T  41548696 tacctcagcagaccacaacacaactttttgtcccacgtacaagttgtctaaaata 41548642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 35225814 - 35225677
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||| |||||||||| ||||| |||| |||||||||| |||||||| |||| |||||||||   ||||||| ||||||   | |||||| ||||||||    
T  35225814 tgtttggtttgtaaaacagtttcagggacaggacaaactggaggcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactt 35225715  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  || ||||||||| ||||||||||||||||||    
T  35225714 tttgtcacaagtacaagttgtctaaaatacaaaaatag 35225677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 37618345 - 37618482
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||| | |||||||  |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  37618345 tgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactt 37618444  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||| ||||||||||||| | | |||||| |||||||    
T  37618445 tttgtctcacgtacaagttgttttaaataccaaaatag 37618482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 39643035 - 39642898
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||| |||||||||||| || | |||||||||| |||||||| ||||||| ||||||  | |||||| |||||||  | |||||||||||||||    
T  39643035 tgtttgatttttaaaactgtttcaggtacaggacaaactggaggcaagggacaagataaaaactgatatttttgtccctcaccaaaccacaacacaactt 39642936  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    | |||  |||||||| ||| |||||||||| |||||||    
T  39642935 tctgtcccacgtacaggttgtctaaaataccaaaatag 39642898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 7394767 - 7394903
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||  ||||||||||| || | | |||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||| ||||||||||    
T  7394767 tgtttgatttacaaaactgtttcaggtacatgacaaactagaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccataacacaactt 7394866  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||| ||||||||||||| |||||||||| ||||||    
T  7394867 tttgtctcacgtacaagttgtctaaaataccaaaata 7394903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 17805843 - 17805707
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||||||||  | | |||||||||| |||||||| ||||||||||||||  | |||||| | |||||  | |||| | |||||||     
T  17805843 tgtttgatttgtaaaactgtttcaagtacaggacaaactagaggcaagggacaagacaaaaactcatatttttgttcctcaccaaaccaaagcacaactc 17805744  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||| ||||||||||||| |||||||||| ||||||    
T  17805743 tttgtctcacgtacaagttgtctaaaataccaaaata 17805707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 30542975 - 30543111
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||  |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  30542975 tgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaatggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 30543074  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    || ||  |||||||||||| |||||||||| ||||||    
T  30543075 ttcgtcccacgtacaagttgtctaaaataccaaaata 30543111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 226 - 366
Target Start/End: Complemental strand, 37862014 - 37861874
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||||||||||| ||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | ||||||||||||||  | |||||| || ||    
T  37862014 caatgtttgattagtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaaaaactcatatttttatccctcaccaaaccacatcataa 37861915  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    || |||||   ||||||||||| |||||||||| |||||||    
T  37861914 ctatttgtcctacgtacaagttgtctaaaataccaaaatag 37861874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 203 - 365
Target Start/End: Original strand, 12753252 - 12753414
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    ||||||||| ||||  |||| | || |||||||||||||| |||||||| || | ||||||||||  ||||||  ||||||||||||||  | ||||||     
T  12753252 aggacaaaacaactctagttgtccagtgtttgatttgtaagactgtttcaggtacaggacaaactgaaggcaaatgacaagacaaaaactcatatttttg 12753351  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    | |||||  | ||||||||||||||||||||  ||| |||||||| |||||||||| ||||||    
T  12753352 ttcctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaata 12753414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 219 - 385
Target Start/End: Original strand, 31513526 - 31513692
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccac 318  Q
    |||||| || |||||||||||||||| |||||| || | | |||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||    
T  31513526 agttatccagtgtttgatttgtaaaattgtttcaggtagatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccac 31513625  T
Q  319 aacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    | |||||||||||||   | ||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  31513626 agcacaactttttgtcctaggtacaagttgtctaaaataccaaaatagcattttgtccttcaaaaat 31513692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 221 - 362
Target Start/End: Complemental strand, 54330 - 54189
Alignment:
Q  221 ttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaa 320  Q
    |||||| |||||||||||||||||||||||||| || | ||||| |  ||  |||| |||| ||||||||||||||||||| ||| |   || ||||||     
T  54330 ttatacgatgtttgatttgtaaaactgtttctgagacatgacaatccggacacaagggacatgacaaaaacataaatttttgtcctttgctaaaccacat 54231  T
Q  321 cacaactttttgtatcacgtacaagttatctaaaatacaaaa 362  Q
    |||||||||||||  ||| ||||||||||| |||||||||||    
T  54230 cacaactttttgtcccacatacaagttatcgaaaatacaaaa 54189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 378
Target Start/End: Complemental strand, 10932887 - 10932739
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||| ||||| ||||| ||||| | |||||| | ||||||||||||| || |||||| |||| |||| ||||||| || |||||| ||||||||    
T  10932887 tgtttgatttataaaattgtttatgggacaagacaaagtagaggcaagagacatgataaaaac-taaaattttgtccctcactaaaccacatcacaactt 10932789  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccat 378  Q
    || ||  ||||||||| || |||||||||| |||||||| |||| |||||    
T  10932788 ttagttccacgtacaatttgtctaaaataccaaaatagtcttttgtccat 10932739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 3251609 - 3251745
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||| |||||||||||| || | |||||||||| |||||||| ||||  |||||||| || |||||| |||||||  | |||||| ||||||||    
T  3251609 tgtttgatttataaaactgtttcaggtacaggacaaactggaggcaagcgacagaacaaaaacttatatttttgtccctcaccaaaccacatcacaactt 3251708  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||| |   ||||||||||| |||||||||| ||||||    
T  3251709 tttatcctacgtacaagttgtctaaaataccaaaata 3251745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 25478395 - 25478239
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| ||||||||||||||||| || | |||||||||| ||| |||| |||| || ||||||  | |||||| |||||||| | | |||| ||||||||    
T  25478395 tgtttaatttgtaaaactgtttcaggtacaggacaaactggagacaagggacaggaaaaaaactcatatttttgtccctcatcaaatcacagcacaactt 25478296  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||   ||||||||||| |||||||||| |||||||| |||| ||| | ||||||    
T  25478295 tttgtcctacgtacaagttgtctaaaataccaaaatagtattttgtccctaaaaaat 25478239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 13406888 - 13407025
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| ||||||||||||||||| || ||| |||||||| ||||||||  |||  ||||||||  | |||||| |||||||  | |||||| || || ||    
T  13406888 tgtttaatttgtaaaactgtttcaggtatatgacaaactggaggcaaggaacagaacaaaaactcatatttttgtccctcaccaaaccacagcataattt 13406987  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||| ||||||||||||| |||||||||| |||||||    
T  13406988 tttgtctcacgtacaagttgtctaaaataccaaaatag 13407025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 260 - 385
Target Start/End: Complemental strand, 31732185 - 31732060
Alignment:
Q  260 gacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaataca 359  Q
    ||||||||||||||||| |||| |||||||||  | |||||| |||||||  | ||||||  |||||||||||| |||| |||||||| ||||||||||     
T  31732185 gacaaacttgaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtctcacatacaagttgtctaaaatacc 31732086  T
Q  360 aaaatagttttttatccatcaaaaat 385  Q
    |||||||  |||| ||| ||||||||    
T  31732085 aaaatagcattttgtccctcaaaaat 31732060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 37474852 - 37474772
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctca 309  Q
    ||||||||||||||||||||||| || | |||||||||| ||||||||||||| ||||||||| || |||||| |||||||    
T  37474852 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaacttatatttttgtccctca 37474772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 213 - 363
Target Start/End: Complemental strand, 9624384 - 9624237
Alignment:
Q  213 aacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcatta 312  Q
    ||||| |||| |||| ||||| |||||||||| ||||||||||| | |||||||  ||| ||||||||| ||||||  ||||||||||   ||||   ||    
T  9624384 aacttcagttgtacactgttt-atttgtaaaattgtttctgggacaagacaaacgggagacaagagacatgacaaa--cataaattttcgacccttgcta 9624288  T
Q  313 taccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaa 363  Q
     |||||||||||||||||||| ||| | |||||||||||||| ||||||||    
T  9624287 aaccacaacacaactttttgtttcatgcacaagttatctaaattacaaaaa 9624237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 203 - 365
Target Start/End: Original strand, 5968791 - 5968953
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    ||||||||| ||||  |||| | || ||||||||||||||||||||||  || | | |||||||| |||||||| |||| |||||||||  | ||||||     
T  5968791 aggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttaaggtacatgacaaactagaggcaagggacaggacaaaaactcatatttttg 5968890  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||| |||  | |||||| ||||||||||| |  ||||||||| || |||||||||| ||||||    
T  5968891 tccttcaccaaaccacagcacaactttttatcccacgtacaaattgtctaaaataccaaaata 5968953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 22999410 - 22999272
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaac-t 327  Q
    ||||||||||||||||||||||| || | |||||||||| ||||||||||||| |||||||||  | |||||| |||||||  | |||| | || ||| |    
T  22999410 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccatagcaaaactt 22999311  T
Q  328 ttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||||  ||||||||| || |||||||||  |||||||    
T  22999310 ttttgtcccacgtacaacttgtctaaaatatcaaaatag 22999272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 229 - 347
Target Start/End: Complemental strand, 40389192 - 40389074
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||  |||| |||||||||  | ||||||||| ||||  | |||||| ||||||||    
T  40389192 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaggacaaaaactgatatttttatctctcaccaaaccacagcacaactt 40389093  T
Q  329 tttgtatcacgtacaagtt 347  Q
    |||||  ||| ||||||||    
T  40389092 tttgtcccacatacaagtt 40389074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 218 - 357
Target Start/End: Original strand, 10320221 - 10320358
Alignment:
Q  218 aagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattatacca 317  Q
    ||||| || ||||||||||||||||||| ||||  |||| | ||||||||||| ||||| ||| | | ||||||| ||||| ||||||||||  | ||||    
T  10320221 aagttgtataatgtttgatttgtaaaaccgttttagggacatgacaaacttga-gcaagggacga-aaaaaaacagaaattcttatccctcaccaaacca 10320318  T
Q  318 caacacaactttttgtatcacgtacaagttatctaaaata 357  Q
    ||||||||||||||    |||||||||||| |||||||||    
T  10320319 caacacaactttttaccacacgtacaagttgtctaaaata 10320358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 231 - 357
Target Start/End: Original strand, 10656641 - 10656767
Alignment:
Q  231 tttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttt 330  Q
    ||||||||||||| || |||  | || | |||||||| ||||||| ||||| |||||||||  || ||||| ||| |||  | |||||||||||||||||    
T  10656641 tttgatttgtaaatcttttttagagacatgacaaactagaggcaaaagacaggacaaaaactgaattttttgtccttcacaaaaccacaacacaactttt 10656740  T
Q  331 tgtatcacgtacaagttatctaaaata 357  Q
    ||| |||||||||| || |||||||||    
T  10656741 tgtctcacgtacaaattgtctaaaata 10656767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 32303592 - 32303694
Alignment:
Q  283 gacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaa 382  Q
    |||||||||  | |||||| |||||||  | ||||||||||||||||||||  |||||||||||| |||||||||| |||||||  |||| ||| |||||    
T  32303592 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 32303691  T
Q  383 aat 385  Q
    |||    
T  32303692 aat 32303694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 260 - 377
Target Start/End: Original strand, 36426231 - 36426348
Alignment:
Q  260 gacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaataca 359  Q
    ||||| ||||||||||| || |||||||||||  ||| |||| ||  | | || ||||||||||| |||||||| |||| |||||||| ||||||||||     
T  36426231 gacaatcttgaggcaagggataagacaaaaactaaaaattttgtcatttactaaaccacaacacatctttttgtctcacatacaagttgtctaaaatacc 36426330  T
Q  360 aaaatagttttttatcca 377  Q
    |||||||| |||| ||||    
T  36426331 aaaatagtcttttgtcca 36426348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 372
Target Start/End: Complemental strand, 5892239 - 5892077
Alignment:
Q  210 aataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctca 309  Q
    |||||||| ||||||| | | ||| |||||||||||| |||  | || | |||||||| || | | ||||||||||||||||  ||||| || ||| |||    
T  5892239 aataacttcagttataaagtattttatttgtaaaactattttagagacatgacaaactagacgaacgagacaagacaaaaactgaaattattgtccttca 5892140  T
Q  310 ttataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagtttttt 372  Q
    ||| |||  |||||||||||||||  |||||| ||||| |||||| ||| ||| || ||||||    
T  5892139 ttaaaccgtaacacaactttttgtcacacgtataagttgtctaaattaccaaattaatttttt 5892077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 45114207 - 45114070
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | || ||||||  || ||||| || | |||||||||  | |||||| |||||||  | ||||||  |||||||    
T  45114207 tgtttgatttgtaaaactgtttcaggtacagaacaaacgagatgcaagggagaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactt 45114108  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||   | ||||||||| |||||||||| |||||||    
T  45114107 tttgtcataggtacaagttgtctaaaataccaaaatag 45114070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 278 - 366
Target Start/End: Complemental strand, 21272787 - 21272699
Alignment:
Q  278 gacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||| |||||||||  | |||||| |||||||  | |||||| |||||||||||||  |||||||||||| |||||||||| |||||||    
T  21272787 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatactaaaatag 21272699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 322 - 385
Target Start/End: Original strand, 5859518 - 5859581
Alignment:
Q  322 acaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||||||||||   |||||||||||||||||||||| |||||||| |||| ||||| ||||||    
T  5859518 acaactttttgtcatacgtacaagttatctaaaatactaaaatagtattttgtccataaaaaat 5859581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 33742613 - 33742559
Alignment:
Q  213 aacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaact 267  Q
    ||||| ||||||||||| ||||||||||||||||||||  ||||||| |||||||    
T  33742613 aacttcagttatacaatatttgatttgtaaaactgttttagggatagaacaaact 33742559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 16485762 - 16485899
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||  ||||| |||| | |||||| |  ||||||  ||||  ||||||||   ||||||| ||||||   | |||||| ||||||||    
T  16485762 tgtttgatttgtaaaatagtttcagggacatgacaaattgaaggcaaaggacagaacaaaaactgcaatttttgtccctcgccaaaccacagcacaactt 16485861  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||   ||||| ||||| ||||||||||||||||||    
T  16485862 tttgtcctacgtataagttttctaaaatacaaaaatag 16485899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 322 - 386
Target Start/End: Complemental strand, 11944934 - 11944870
Alignment:
Q  322 acaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaatt 386  Q
    |||||||||||| ||| |||||| || |||||||||| |||||||| |||| | | |||||||||    
T  11944934 acaactttttgtctcatgtacaatttgtctaaaataccaaaatagtcttttttgcctcaaaaatt 11944870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 203 - 385
Target Start/End: Original strand, 20802436 - 20802618
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    |||||| || ||||| |||||| || ||||||||||||||||||||||| || | |||||||||| ||||||||||||| |||||||||  | ||||||     
T  20802436 aggacagaacaactttagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactcatatttttg 20802535  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||||  | |||||| |||||||||||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  20802536 tccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 20802618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 261 - 404
Target Start/End: Complemental strand, 52673934 - 52673791
Alignment:
Q  261 acaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaa 360  Q
    ||||||| ||| |||| |||| |||||||||| |||||||| ||||||| || ||| |||||||| ||||||| |||||||  |||||||||||||||||    
T  52673934 acaaactggagtcaagggacatgacaaaaacagaaatttttgtccctcactaaacctcaacacaattttttgtctcacgtatgagttatctaaaatacaa 52673835  T
Q  361 aaatagttttttatccatcaaaaattattcaataccataaaagt 404  Q
    |||||  ||||| |||| ||||||||||||||||||||||||||    
T  52673834 aaataaatttttgtccaccaaaaattattcaataccataaaagt 52673791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 227 - 367
Target Start/End: Complemental strand, 9948086 - 9947946
Alignment:
Q  227 aatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaac 326  Q
    ||||||||||||||||||||||||  || | | |||||||||||||||||||||| |||||||||  ||||| |||||||||| || ||||||  |||||    
T  9948086 aatgtttgatttgtaaaactgtttaaggaacatgacaaacttgaggcaagagacatgacaaaaactaaaattcttatccctcactaaaccacattacaac 9947987  T
Q  327 tttttgtatcacgtacaagttatctaaaatacaaaaatagt 367  Q
    ||||||| |||||||||||||||  ||||||| ||||||||    
T  9947986 tttttgtctcacgtacaagttattcaaaataccaaaatagt 9947946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 12601041 - 12600904
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||| ||||| || | |||||||||| |||  ||| ||||||||||||||  | |||||| |||||||| | |||||||||||||||    
T  12601041 tgtttgatttgtaaaacagtttcaggtacaggacaaactggagataagggacaagacaaaaactcatatttttgtccctcatcaaaccacaacacaactt 12600942  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||| ||||||||||||| |||||||||| |||||||    
T  12600941 tttgtctcacgtacaagttgtctaaaataccaaaatag 12600904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 38812675 - 38812538
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  38812675 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 38812576  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||| |||||||    
T  38812575 tttgtcccacgtacaagttgtctaaaataccaaaatag 38812538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 182 - 385
Target Start/End: Original strand, 33552721 - 33552929
Alignment:
Q  182 gtttgatctgctaaaaaataaaggaca-----aaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaag 276  Q
    ||||||| |||||||||||||||||||     ||| ||||  |||| | || ||||||||||||||||||||||| || | |||||||| | || |||||    
T  33552721 gtttgatttgctaaaaaataaaggacaggacaaaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaattggatgcaag 33552820  T
Q  277 agacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatcc 376  Q
     ||||||||||||||  | |||||| |||||||  | |||||| |||||||||||||  |||||||||||| |||||||||| |||||||  |||| |||    
T  33552821 ggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 33552920  T
Q  377 atcaaaaat 385  Q
     ||||||||    
T  33552921 ctcaaaaat 33552929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 203 - 385
Target Start/End: Complemental strand, 23522061 - 23521879
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    ||||||||| ||||  |||| | || ||||||||||||||||||||||| || | |||||||||| || ||||| || | |||||||||  | ||||||     
T  23522061 aggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaagcaagggataggacaaaaactcatatttttg 23521962  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||||  | ||||||||||||||||||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  23521961 tccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 23521879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 47642422 - 47642559
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||| ||||||||||| ||||||  | |||||| |||||||  | |||||||||||||||    
T  47642422 tgtttgatttgtaaaactgtttcaggcacaggacaaactggaggtaagagacaagataaaaactgatatttttgtccctcagcaaaccacaacacaactt 47642521  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||  |||||||    
T  47642522 tttgtcccacgtacaagttgtctaaaatatcaaaatag 47642559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 50729473 - 50729610
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| |||| || ||||||| |||||||| |||| |||||||||  |||||||| ||  |||  | |||||| ||||||||    
T  50729473 tgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacatgacaaaaactgaaatttttgtctatcaccaaaccacagcacaactt 50729572  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||| ||||||||||||| |||||||||| |||||||    
T  50729573 tttgtctcacgtacaagttgtctaaaataccaaaatag 50729610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 52949875 - 52949738
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| ||||||||||||||||| || | |||||||||| ||||||||||||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  52949875 tgtttcatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactt 52949776  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||  |||||||    
T  52949775 tttgtcccacgtacaagttgtctaaaatatcaaaatag 52949738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 33176963 - 33177099
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  33176963 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 33177062  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||| ||||||| |||||||||| ||||||    
T  33177063 tttgtcccacgcacaagttgtctaaaataccaaaata 33177099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 50727844 - 50727980
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | ||||||||  ||||||| |||| |||||||||  | |||||| |||||||| | |||||||||||||||    
T  50727844 tgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactt 50727943  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  50727944 tttgtcccacgtacaagttgtctaaaataccaaaata 50727980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 50735858 - 50735994
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | ||||||||  ||||||| |||| |||||||||  | |||||| |||||||| | |||||||||||||||    
T  50735858 tgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactt 50735957  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  50735958 tttgtcccacgtacaagttgtctaaaataccaaaata 50735994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 231 - 366
Target Start/End: Original strand, 44649097 - 44649232
Alignment:
Q  231 tttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttt 330  Q
    ||||||||||||||||||||| || | |||||||||| ||||||||||||| |||||||||  | |||||| |||||||  | |||||||||||||||||    
T  44649097 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttt 44649196  T
Q  331 tgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||  || ||||||||| |||||||||  |||||||    
T  44649197 tgtcccatgtacaagttgtctaaaatatcaaaatag 44649232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 203 - 385
Target Start/End: Complemental strand, 56154802 - 56154620
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    |||||| || ||||| |||| | || ||||||||||||||||||||||| || | |||| ||||| |||||||| ||||  ||||||||  | ||||||     
T  56154802 aggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggaaaaactggaggcaagggacagaacaaaaactcatatttttg 56154703  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||||  | |||||| |||||||||||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  56154702 tccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 56154620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 21202894 - 21202757
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||  || | |||||||||| ||||||||||||| |||||||||  | | |||| |||||||  | |||||||||||||||    
T  21202894 tgtttgatttgtaaaactgtttaaggtacaggacaaactggaggcaagagacaggacaaaaactcataattttgtccctcaccaaaccacaacacaactt 21202795  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||  |||||||    
T  21202794 tttgtcccacgtacaagttgtctaaaatatcaaaatag 21202757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 24002494 - 24002357
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||| ||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  24002494 tgtttgatttgtaaaacagtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 24002395  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||| |||||||    
T  24002394 tttgtcccacgtacaagttgtctaaaataccaaaatag 24002357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 2629882 - 2630018
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||  |||| |||||||||  | |||||| |||||||  | |||| | ||||||||    
T  2629882 tgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaaaggacatgacaaaaactcatatttttgtccctcaccagaccaaatcacaactt 2629981  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||| ||||||||||||| |||||||||| ||||||    
T  2629982 tttgtctcacgtacaagttgtctaaaataccaaaata 2630018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 3649791 - 3649655
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| |||| || |||||||  ||||||| |||| |||||||||  |||||||| |||||||  | |||||| ||||||||    
T  3649791 tgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggacaggacaaaaactaaaatttttgtccctcaccaaaccacagcacaactt 3649692  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| ||||||| || ||||||    
T  3649691 tttgtcccacgtacaagttgtctaaaacaccaaaata 3649655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 29785468 - 29785624
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| ||| |||| ||||  ||||||||  | |||||| |||||||  | ||||||||||| |||    
T  29785468 tgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggacagaacaaaaactcatatttttgtccctcaccaaaccacaacacagctt 29785567  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  29785568 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 29785624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 38486188 - 38486344
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||| ||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  38486188 tgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 38486287  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| | ||||||||||| |||||||||  |||||||  |||| ||| ||||||||    
T  38486288 tttgtctaacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaaaat 38486344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 231 - 366
Target Start/End: Complemental strand, 21580179 - 21580044
Alignment:
Q  231 tttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttt 330  Q
    ||||||||||||||||||||| || | |||||||| | |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||||    
T  21580179 tttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttt 21580080  T
Q  331 tgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||| |||||||||| || |||||||||| |||||||    
T  21580079 tgtctcacgtacaaattgtctaaaataccaaaatag 21580044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 219 - 385
Target Start/End: Original strand, 55065253 - 55065420
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgagg-caagagacaagacaaaaacataaatttttatccctcattatacca 317  Q
    |||||| || ||||||||||||||||||||||| || | | |||||||| |||| |||| |||| |||||||||  | |||||| |||||||  | ||||    
T  55065253 agttattcagtgtttgatttgtaaaactgtttcaggtacaagacaaactggagggcaagggacaggacaaaaactcatatttttgtccctcaccaaacca 55065352  T
Q  318 caacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||||||||||||||  |||||||||||| |||||||||  |||||||  |||| ||| ||||||||    
T  55065353 caacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccttcaaaaat 55065420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 226 - 356
Target Start/End: Complemental strand, 52319481 - 52319351
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||||||||||||||||||||||||| || | |||||||||| |||||||| |||| ||| |||||  | |||||| |||||||  | |||||| |||||    
T  52319481 caatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacgaaaactcatatttttgtccctcaccaaaccacagcacaa 52319382  T
Q  326 ctttttgtatcacgtacaagttatctaaaat 356  Q
    ||||||||  |||||||||||| ||||||||    
T  52319381 ctttttgtcccacgtacaagttgtctaaaat 52319351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 182 - 366
Target Start/End: Complemental strand, 4325998 - 4325809
Alignment:
Q  182 gtttgatctgctaaaaaataaag-----gacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaag 276  Q
    ||||||| |||||||||||||||     ||||||| ||||  |||| | || ||||||||||||||||||||||| || | | |||||||| ||||||||    
T  4325998 gtttgatttgctaaaaaataaagtacaagacaaaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaag 4325899  T
Q  277 agacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
     |||| || ||||||  | |||||| || ||||  | ||| ||||||||||||||||  |||||||||||| |||||||||| |||||||    
T  4325898 ggacaggagaaaaactcatatttttgtctctcacaaaaccgcaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 4325809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 24210474 - 24210337
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | ||| || |||||||  | |||||| ||||||||    
T  24210474 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatattattgtccctcaccaaaccacagcacaactt 24210375  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||| |  |||||||||||| |||||||||| |||||||    
T  24210374 tttatcccacgtacaagttgtctaaaataccaaaatag 24210337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 229 - 386
Target Start/End: Original strand, 36743619 - 36743776
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||| ||||||||||||||| || | |||||||||| |||||||| |||| ||||||||   | |||||| |||||||  | || ||| ||||||||    
T  36743619 tgtttgaattgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaattcatatttttgtccctcaccaaactacagcacaactt 36743718  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaatt 386  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| |||||||||    
T  36743719 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatt 36743776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 37865908 - 37865771
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | ||||| || ||||||||||||| |||||||||  | |||||| |||||||  | | |||||||||||||    
T  37865908 tgtttgatttgtaaaactgtttcaggtacatgacaatctggaggcaagagacatgacaaaaactcatatttttgtccctcaccaaatcacaacacaactt 37865809  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  || ||||||||| |||||||||| |||||||    
T  37865808 tttgtcccatgtacaagttgtctaaaataccaaaatag 37865771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 44355786 - 44355942
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa-ct 327  Q
    ||||||||||||||| ||||||  ||||||||||||||| |||| |||||| | ||||||||   |||||||| |||||||||| ||||||||||||  |    
T  44355786 tgtttgatttgtaaa-ctgttttagggataggacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 44355884  T
Q  328 ttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||| | ||||||||||| | | | |||| |||||||| |||| ||||||||||||    
T  44355885 ttttgtcttacgtacaagttgtatgatataccaaaatagtcttttgtccatcaaaaat 44355942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 46680441 - 46680570
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| ||||| |  | |||||| ||||||||    
T  46680441 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacagcacaactt 46680540  T
Q  329 tttgtatcacgtacaagttatctaaaatac 358  Q
    ||||| |||||||||| || ||||||||||    
T  46680541 tttgtctcacgtacaaattgtctaaaatac 46680570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 1231466 - 1231338
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||| ||||| ||||||||||||  |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  1231466 tgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagagactggacaaaaactcatatttttgtccctcacaaaaccacagcacaactt 1231367  T
Q  329 tttgtatcacgtacaagttatctaaaata 357  Q
    |||||  |||||||||||| |||||||||    
T  1231366 tttgtcccacgtacaagttgtctaaaata 1231338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 2725064 - 2725219
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||| |||  || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  2725064 tgtttgatttgtaaaactcttttaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactt 2725163  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  2725164 tttgt-ccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 2725219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 182 - 385
Target Start/End: Complemental strand, 36886139 - 36885931
Alignment:
Q  182 gtttgatctgctaaaaaataaaggacaa-----aataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaag 276  Q
    ||||||| ||||||||||||||||||||     || ||||  |||| | || ||||||||||||||||||||||| || | | |||||||| ||||||||    
T  36886139 gtttgatttgctaaaaaataaaggacaagacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaag 36886040  T
Q  277 agacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatcc 376  Q
     |||| |||||||||  | |||||| |||||||  | |||||| ||||||||||| |  ||||||||| || ||||||||||  ||||||  |||| |||    
T  36886039 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttatcccacgtacaaattgtctaaaatacctaaatagcattttgtcc 36885940  T
Q  377 atcaaaaat 385  Q
     ||||||||    
T  36885939 ctcaaaaat 36885931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 284 - 388
Target Start/End: Complemental strand, 43893677 - 43893573
Alignment:
Q  284 acaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaa 383  Q
    |||||| ||||||| ||| ||| ||| || |||||||||||| ||||||| |||||| || |||||||||||||||||||||||||||| |||| |||||    
T  43893677 acaaaatcataaatatttgtccttcactaaaccacaacacaattttttgtctcacgtgcaggttatctaaaatacaaaaatagttttttgtccaccaaaa 43893578  T
Q  384 attat 388  Q
    |||||    
T  43893577 attat 43893573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 203 - 366
Target Start/End: Original strand, 50178397 - 50178561
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    |||||| || ||||| |||| | || ||||||||||||||||||||||| || | |||||||||| ||||||||||||| |||||||||  | ||||||     
T  50178397 aggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttg 50178496  T
Q  303 tccctcattataccacaacacaac-tttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    | |||||  | |||||| |||||| |||||||  |||||||||||| |||||||||  |||||||    
T  50178497 tgcctcagcaaaccacagcacaacttttttgtcccacgtacaagttgtctaaaatatcaaaatag 50178561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 231 - 366
Target Start/End: Complemental strand, 16320672 - 16320537
Alignment:
Q  231 tttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttt 330  Q
    |||||||||||||||||| || || |||||| ||||| |||||||| |||| || ||||||  | |||||| |||||||  | |||||||||||||||||    
T  16320672 tttgatttgtaaaactgtctcaggtataggaaaaactggaggcaagggacaggataaaaactgatatttttgtccctcaccaaaccacaacacaactttt 16320573  T
Q  331 tgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||  |||||||| |||  |||||||||||||||||    
T  16320572 tgtcccacgtacaggttgcctaaaatacaaaaatag 16320537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 203 - 366
Target Start/End: Complemental strand, 36497398 - 36497235
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    ||||||||| ||||  |||| | || ||||||||||||||||||||||| || | |||||||||| ||| ||||||||| |||||||||  | ||||||     
T  36497398 aggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagagacaggacaaaaactcatatttttg 36497299  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||||  | |||||| |||||||||||||   || |||||||| |||||||||  |||||||    
T  36497298 tccctcaccaaaccacatcacaactttttgtccaacatacaagttgtctaaaatatcaaaatag 36497235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 42870126 - 42869992
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||||||||||| | |||||||||| | ||||||||||| |||||||||  | |||||| |||||||  | |||||| ||||||      
T  42870126 tgtttgatttgtaaaactgtttctggtacaggacaaactgggggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaac-- 42870029  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
     ||||  |||||| ||||| ||||||||||||||||||    
T  42870028 -ttgtcccacgtataagttgtctaaaatacaaaaatag 42869992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 386
Target Start/End: Original strand, 20517953 - 20518110
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| ||||||||||||| ||||||||   | |||||| |||||||  | | |||| || |||||    
T  20517953 tgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagagacaggacaaaaagtcatatttttgtccctcaccaaatcacagcataactt 20518052  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaatt 386  Q
     ||||  |||||||||||| |||||||||| |||||||  |||| ||| |||||||||    
T  20518053 cttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatt 20518110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 32181418 - 32181281
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||||||||  | | |||||||||| || ||||| |||| |||||||||  | |||||| |||||||  | ||||||  |||||||    
T  32181418 tgtttgatttgtaaaactgtttcaagtacaggacaaactagatgcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactt 32181319  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||| |||||||    
T  32181318 tttgtcccacgtacaagttgtctaaaataccaaaatag 32181281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 44324273 - 44324410
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| ||||||| ||||  |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  44324273 tgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaaaagacgggacaaaaactgatatttttgtccctcaccaaaccacagcacaactt 44324372  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| | | |||||| |||||||    
T  44324373 tttgtcccacgtacaagttgttttaaataccaaaatag 44324410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 9512271 - 9512427
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | || ||||| ||||||||  ||| |||||||||  | |||||| ||| |||  | |||||| ||||||||    
T  9512271 tgtttgatttgtaaaactgtttcaggtacaagataaactggaggcaagtaacaggacaaaaactcatatttttgtccttcaccaaaccacagcacaactt 9512370  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  9512371 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 9512427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 22318315 - 22318451
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||  |||| || |||||||  |||||||||||| |||||||    |||||||| |||||||  | |||||||||||||||    
T  22318315 tgtttgatttgtaaaactgttttagggacagaacaaactgaaggcaagagacaggacaaaatttgaaatttttgtccctcaccaaaccacaacacaactt 22318414  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||| | ||||| ||||| ||||||| || ||||||    
T  22318415 tttgtcttacgtagaagttgtctaaaacaccaaaata 22318451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 39078816 - 39078680
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| |||| || ||||||| ||||||||||| | ||||||| |  |||||||| |||||||  | |||||||||||| ||    
T  39078816 tgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagagataggacaaaacctgaaatttttgtccctcaccaaaccacaacacaaatt 39078717  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||   |||||| |||| ||||||| || ||||||    
T  39078716 tttgtcctacgtacgagttgtctaaaacaccaaaata 39078680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 333
Target Start/End: Complemental strand, 42772943 - 42772839
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| |||||| || | | ||||||||||||||||||||||||||||||||  | |||||| ||| |||  | |||||||||||||||    
T  42772943 tgtttgatttgtaaaattgtttcaggtacatgacaaacttgaggcaagagacaagacaaaaactcatatttttgtccttcaccaaaccacaacacaactt 42772844  T
Q  329 tttgt 333  Q
    |||||    
T  42772843 tttgt 42772839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 213 - 385
Target Start/End: Original strand, 49152015 - 49152186
Alignment:
Q  213 aacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcatta 312  Q
    ||||| |||||| || ||||| ||||||||||||||||| || | | |||||||| || ||||| |||| |||||||||  | |||||| |||||||  |    
T  49152015 aactttagttatccagtgtttaatttgtaaaactgtttcaggtacaagacaaactggatgcaagggacacgacaaaaactcatatttttgtccctcacca 49152114  T
Q  313 taccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
     |||||||||||||||||| |  |||||||||||| ||||||| || ||||||   |||| ||||||||||||    
T  49152115 aaccacaacacaactttttatcccacgtacaagttgtctaaaa-accaaaataacattttgtccatcaaaaat 49152186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 203 - 329
Target Start/End: Complemental strand, 11056223 - 11056097
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    |||| |||| ||||| |||| | || ||||||||||||||||||||||| || | |||||||||| |||||||| ||||||||||||||  | ||||||     
T  11056223 aggataaaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactgatatttttg 11056124  T
Q  303 tccctcattataccacaacacaacttt 329  Q
    ||||| |  | ||||||||||||||||    
T  11056123 tcccttaccaaaccacaacacaacttt 11056097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 229 - 355
Target Start/End: Complemental strand, 26083494 - 26083368
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| |||||| |||| || ||||||| |||||||| |||| |||||||||  |||||||| |||||||  | |||||| || |||||    
T  26083494 tgtttgatttgtaaaattgtttcagggacagaacaaactggaggcaagggacatgacaaaaactgaaatttttgtccctcaccaaaccacagcataactt 26083395  T
Q  329 tttgtatcacgtacaagttatctaaaa 355  Q
    |||||  ||| |||||||| |||||||    
T  26083394 tttgtcccacttacaagttgtctaaaa 26083368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 315 - 385
Target Start/End: Complemental strand, 40792486 - 40792416
Alignment:
Q  315 ccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  40792486 ccacatcacaactttttgtttcatgtacaagttatctaaaatacaaaaatagctttttgtccatcaaaaat 40792416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 28115406 - 28115270
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||||||| ||| | | |||||||| |||||||| |||| || |||||   | |||||| |||||||  | |||||||||||||||    
T  28115406 tgtttgatttgtaaaactgttt-tggtacaagacaaactggaggcaagggacaggagaaaaattgatatttttgtccctcaccaaaccacaacacaactt 28115308  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  ||| |||||||| |||||||||| |||||||    
T  28115307 tttgtcccacatacaagttgtctaaaataccaaaatag 28115270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 41712002 - 41711865
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||| ||||||| || | ||||||||||  ||||||| |||| |||||| ||  | |||||| |||||||  | ||||||  |||||||    
T  41712002 tgtttgatttgtaaagctgtttcaggtacaggacaaactgaaggcaagggacaggacaaagactcatatttttgtccctcaccaaaccacagtacaactt 41711903  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||| ||||||||| ||| |||||||||| |||||||    
T  41711902 tttgtctcacgtacaggttgtctaaaataccaaaatag 41711865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 37695472 - 37695600
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| ||||| ||||||||||| || | | || ||| | |||| ||||||||||||||||||  | |||||| |||||||| | |||||||||||||||    
T  37695472 tgttttatttggaaaactgtttcaggtacatgataaattggaggtaagagacaagacaaaaactgatatttttgtccctcatcaaaccacaacacaactt 37695571  T
Q  329 tttgtatcacgtacaagttatctaaaata 357  Q
    |||||  |||||||| ||| |||||||||    
T  37695572 tttgtcccacgtacaggttgtctaaaata 37695600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 229 - 388
Target Start/End: Complemental strand, 20694526 - 20694367
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| ||||||||||||||||  || | ||||||||||  ||||||  |||| |||||||||  | |||||| |||||||  | |||||||| ||||||    
T  20694526 tgtttaatttgtaaaactgttttaggtacaggacaaactgaaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacgcaactt 20694427  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaattat 388  Q
    |||||   ||||||||||| |||||||||| |||||||  |||| |||  ||||||||||    
T  20694426 tttgtccaacgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaattat 20694367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 219 - 365
Target Start/End: Original strand, 43189684 - 43189829
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccac 318  Q
    |||| |||| |||||||||||||||| ||||| ||  ||| ||||||||  ||||||| |||||||||||||||||| ||||| |  |||| || |||||    
T  43189684 agttgtacagtgtttgatttgtaaaattgtttttgaaatatgacaaactgaaggcaagggacaagacaaaaacataattttttgtgtctcactaaaccac 43189783  T
Q  319 aacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
     |||||| |||||||  ||  | |||||||||| |||||||||||||    
T  43189784 gacacaagtttttgtcccaaatgcaagttatct-aaatacaaaaata 43189829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 231 - 365
Target Start/End: Complemental strand, 55594038 - 55593904
Alignment:
Q  231 tttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttt 330  Q
    ||||||||||||||||||||| || | | || ||||| |||||||| |||| |||||||||  | |||||  |||||||  | |||||| ||||||||||    
T  55594038 tttgatttgtaaaactgtttcaggtacatgataaactggaggcaagggacaggacaaaaactcatattttagtccctcaccaaaccacagcacaactttt 55593939  T
Q  331 tgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    | |  |||||||||||| |||||||||| ||||||    
T  55593938 tatcccacgtacaagttgtctaaaataccaaaata 55593904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 44640494 - 44640417
Alignment:
Q  213 aacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaa 290  Q
    ||||| |||| |||| |||||||||||||||||||||| ||| | | |||||||| ||||||||||||||||||||||    
T  44640494 aacttcagttgtacagtgtttgatttgtaaaactgtttatggaaaatgacaaactagaggcaagagacaagacaaaaa 44640417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 50186683 - 50186546
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| |||||  ||   |||||||||| |||||||| |||  || ||||||  | |||||| |||||||  | |||||||||||||||    
T  50186683 tgtttgatttgtaaaattgttttaggtgcaggacaaactagaggcaagggacgggataaaaactcatatttttgtccctcaccaaaccacaacacaactt 50186584  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||| |  ||| |||||||| ||||||||||||||||||    
T  50186583 tttatcccacatacaagttgtctaaaatacaaaaatag 50186546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 53200574 - 53200731
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaac-t 327  Q
    ||||||||||| ||||||||||| | || |||| ||||| ||||||||  ||| |||||||||  |||||||| |||||||  | |||||| |||||| |    
T  53200574 tgtttgatttgcaaaactgtttcagagacaggataaactggaggcaaggaacatgacaaaaactgaaatttttgtccctcaccaaaccacagcacaactt 53200673  T
Q  328 ttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||||  |||||||||||| ||||||| |  |||||||| |||  ||| ||||||||    
T  53200674 ttttgtcccacgtacaagttgtctaaaacatcaaaatagtatttcgtccctcaaaaat 53200731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 203 - 333
Target Start/End: Original strand, 47361319 - 47361448
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaa-acataaattttt 301  Q
    |||||| || ||||| |||| | || ||||||||||||||||||||||| || | |||||||||  |||||||| ||||||||||||  |||  ||||||    
T  47361319 aggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaaccggaggcaagggacaagacaaaattcat--attttt 47361416  T
Q  302 atccctcattataccacaacacaactttttgt 333  Q
     |||||||  | ||||||||||||||||||||    
T  47361417 gtccctcaccaaaccacaacacaactttttgt 47361448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 394
Target Start/End: Complemental strand, 153859 - 153776
Alignment:
Q  311 tataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaattattcaata 394  Q
    ||||||||||||||| ||||||| |||| ||||||| || |||||||  |||||| |||||||||||  |||||||||||||||    
T  153859 tataccacaacacaattttttgtttcacctacaagtgatttaaaatatcaaaataattttttatccacaaaaaattattcaata 153776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 229 - 355
Target Start/End: Complemental strand, 2787119 - 2786993
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| |||||| || | || ||||||| || ||||| |||| |||||||||  | |||||| ||| ||| || |||||| ||||| ||    
T  2787119 tgtttgatttgtaaaattgtttcaggtacagtacaaactggatgcaagggacaggacaaaaactcatatttttgtccttcactaaaccacatcacaaatt 2787020  T
Q  329 tttgtatcacgtacaagttatctaaaa 355  Q
    |||||  ||||||||| ||||||||||    
T  2787019 tttgtcccacgtacaaattatctaaaa 2786993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 229 - 355
Target Start/End: Complemental strand, 6776733 - 6776607
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| || ||  || |||| ||||| | |||||||| |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  6776733 tgtttgatttgtaaaattgatttaggtatagcacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 6776634  T
Q  329 tttgtatcacgtacaagttatctaaaa 355  Q
    |||||  |||||| ||||| |||||||    
T  6776633 tttgtcccacgtaaaagttgtctaaaa 6776607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 7001981 - 7001903
Alignment:
Q  255 gataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgt 333  Q
    |||| |||||||| |||||||||||||  ||||||||| |||||||| |||||||  | ||||||||||||||||||||    
T  7001981 gataagacaaactcgaggcaagagacagaacaaaaacaaaaatttttgtccctcaccaaaccacaacacaactttttgt 7001903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 229 - 291
Target Start/End: Complemental strand, 14296722 - 14296660
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaac 291  Q
    |||||||||||||||| |||||| || ||||||||||||||||||||| |||| |||||||||    
T  14296722 tgtttgatttgtaaaattgtttcaggtataggacaaacttgaggcaagggacaggacaaaaac 14296660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 229 - 291
Target Start/End: Complemental strand, 14314970 - 14314908
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaac 291  Q
    |||||||||||||||| |||||| || ||||||||||||||||||||| |||| |||||||||    
T  14314970 tgtttgatttgtaaaattgtttcaggtataggacaaacttgaggcaagggacaggacaaaaac 14314908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 229 - 355
Target Start/End: Complemental strand, 29593050 - 29592924
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| || ||||| |||| |||||||||  | |||||| | | ||| || |||||| ||||||||    
T  29593050 tgtttgatttgtaaaactgtttcaggtacaggacaaactggatgcaagggacatgacaaaaactcatatttttgtacttcactaaaccacagcacaactt 29592951  T
Q  329 tttgtatcacgtacaagttatctaaaa 355  Q
    |||||  ||| || ||||| |||||||    
T  29592950 tttgtcccacataaaagttgtctaaaa 29592924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 231 - 365
Target Start/End: Original strand, 31445811 - 31445943
Alignment:
Q  231 tttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttt 330  Q
    |||||||||||||||||||| || |||| |||||||  |||||||  ||||| |||||| ||||||  ||| |||| || || || ||| ||||||||||    
T  31445811 tttgatttgtaaaactgtttttgagatatgacaaacgggaggcaaaggacaacacaaaa-cataaacctttgtccc-cactaaacaacatcacaactttt 31445908  T
Q  331 tgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||   ||||||||| ||||||||||||||||||||    
T  31445909 tgccacacgtacaaattatctaaaatacaaaaata 31445943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 3579285 - 3579136
Alignment:
Q  224 tacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattt-ttatccctcattataccacaaca 322  Q
    ||||| |||||||| ||||| ||||||  |||  ||||||||||||||||||| |||| ||||||||  ||||||| || ||| ||| || |||| | ||    
T  3579285 tacaacgtttgattcgtaaatctgttttaggggcaggacaaacttgaggcaagggacatgacaaaaaagtaaatttattttccatcactaaaccatatca 3579186  T
Q  323 caactttttgtatcacgtacaagttatctaaaatacaaaaatagtttttt 372  Q
    |||||||||||   || | |||||| |||||||||| |||||||| ||||    
T  3579185 caactttttgtccaacattcaagttgtctaaaataccaaaatagtctttt 3579136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 29616321 - 29616189
Alignment:
Q  229 tgtttgatttgtaaaactgtttc-tgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaact 327  Q
    |||||||||||||||||||||||  || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||      |||||| |||||||    
T  29616321 tgtttgatttgtaaaactgtttcaaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccct-----gaccacagcacaact 29616227  T
Q  328 ttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||||  ||||||||| || |||||||||| ||||||    
T  29616226 ttttgtcccacgtacaaattgtctaaaataccaaaata 29616189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 56487213 - 56487274
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaa 290  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||    
T  56487213 tgtttgatttgtaaaactgtttcagatataggacaaacttgaggcaagggacaggacaaaaa 56487274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 278 - 386
Target Start/End: Original strand, 41897338 - 41897446
Alignment:
Q  278 gacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatcca 377  Q
    |||| |||||||||| |||||| | ||||||  || || ||| ||||||||||| |   ||||| ||||||| |||||||||||||||||||||||||||    
T  41897338 gacaggacaaaaacaaaaatttgtgtccctcgataaacaacagcacaactttttatcctacgtaaaagttatataaaatacaaaaatagttttttatcca 41897437  T
Q  378 tcaaaaatt 386  Q
      |||||||    
T  41897438 caaaaaatt 41897446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 54543144 - 54543009
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||| ||||  | | |||||||| | |||||||| |||| |||||||||  | |||||| |||||||  | |||| | |||||| |    
T  54543144 tgtttgatttgtaaaactatttcaagtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccatagcacaac-t 54543046  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  54543045 tttgtcccacgtacaagttgtctaaaataccaaaata 54543009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 278 - 385
Target Start/End: Complemental strand, 43641205 - 43641098
Alignment:
Q  278 gacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatcca 377  Q
    |||| |||||||||  | |||||| |||||||  | |||||| |||||||||||||  |||||||||||| |||||||||| |||||||  |||| |||     
T  43641205 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccc 43641106  T
Q  378 tcaaaaat 385  Q
    ||||||||    
T  43641105 tcaaaaat 43641098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 227 - 364
Target Start/End: Original strand, 45577617 - 45577758
Alignment:
Q  227 aatgtttgatttgtaaaa-ctgtttctgggataggacaaacttgaggcaagagacaagacaaaaacata---aatttttatccctcattataccacaaca 322  Q
    |||||||||||||||||| ||||||   ||| | |||||||| ||||||||||||| |||||||| | |   |||| || | ||||  || |||||||||    
T  45577617 aatgtttgatttgtaaaagctgttttatggacatgacaaactggaggcaagagacatgacaaaaaaaaatgaaattcttgttcctcgctaaaccacaaca 45577716  T
Q  323 caactttttgtatcacgtacaagttatctaaaatacaaaaat 364  Q
    |||||||||||  ||||| |||||| |||||||||| |||||    
T  45577717 caactttttgtcccacgtgcaagttgtctaaaataccaaaat 45577758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 7381352 - 7381278
Alignment:
Q  309 attataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaa 383  Q
    |||| |||| ||||||||||||| |  | ||||||| ||||||||||||||||||||||||||| |||| |||||    
T  7381352 attaaaccataacacaactttttttcacgcgtacaaattatctaaaatacaaaaatagttttttgtccaccaaaa 7381278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 355
Target Start/End: Original strand, 7554888 - 7555014
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||||||||  | | |  |||||||  | |||||||||| || ||||||    |||||| ||| ||| || |||| ||||||||||    
T  7554888 tgtttgatttgtaaaactgtttcatgtacaaaacaaactgaatgcaagagacatgataaaaactcgtatttttgtccttcactaaaccataacacaactt 7554987  T
Q  329 tttgtatcacgtacaagttatctaaaa 355  Q
    ||||| ||||||||||||| |||||||    
T  7554988 tttgtctcacgtacaagttgtctaaaa 7555014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 219 - 385
Target Start/End: Original strand, 20644162 - 20644328
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccac 318  Q
    ||||||||  ||||||||||| |||||| ||||||||| |    ||||| |||||||   ||| | |||||| |||||||||| || |||| || |||||    
T  20644162 agttatacggtgtttgatttgcaaaactatttctgggacaatctaaactagaggcaatgaacatgtcaaaaatataaatttttgtctctcactaaaccac 20644261  T
Q  319 aacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    | | || ||| |||| ||  ||||||||||||||| |||||||||||| ||||| | || |||||||    
T  20644262 atcccagcttcttgtctcgtgtacaagttatctaagatacaaaaatagatttttgtacaccaaaaat 20644328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 205 - 347
Target Start/End: Original strand, 25978519 - 25978660
Alignment:
Q  205 gacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatc 304  Q
    ||||||| ||||| | |||| || |||||||||||||||||||||||  ||| | |||||| | |||||||   ||| |||||||||  |||||||| ||    
T  25978519 gacaaaacaacttcaattatccagtgtttgatttgtaaaactgtttc-aggacatgacaaattggaggcaatgaacaggacaaaaactgaaatttttgtc 25978617  T
Q  305 cctcattataccacaacacaactttttgtatcacgtacaagtt 347  Q
    |||||  | |||| | ||||||||||||| |||| ||||||||    
T  25978618 cctcaccaaaccatatcacaactttttgtctcacttacaagtt 25978660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 274 - 404
Target Start/End: Original strand, 37859235 - 37859365
Alignment:
Q  274 aagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagtttttta 373  Q
    |||| ||| |||||||||  ||| ||||||| |||| || |||| ||||||||||||||| |||  ||||| || ||||||| || |||||| ||||||     
T  37859235 aagaaacatgacaaaaactaaaaattttatctctcaataaaccataacacaactttttgtctcaaatacaacttgtctaaaacactaaaataattttttg 37859334  T
Q  374 tccatcaaaaattattcaataccataaaagt 404  Q
    ||||  ||||||| |||||||| ||| ||||    
T  37859335 tccacaaaaaattgttcaatacaatacaagt 37859365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 9807310 - 9807174
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| || ||||  |||| |||||||||  || ||||| | |||||  | ||||||  |||||||    
T  9807310 tgtttgatttgtaaaactgtttcaggtacaagacaaactagatgcaatggacaggacaaaaactcaactttttgt-cctcaccaaaccacagtacaactt 9807212  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||   ||||||||||| |||||||||| |||||||    
T  9807211 tttgtcctacgtacaagttgtctaaaataccaaaatag 9807174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 219 - 365
Target Start/End: Complemental strand, 30942954 - 30942807
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacat-aaatttttatccctcattatacca 317  Q
    |||||| || |||||||||| |||||||||||| |||| || ||||| | ||||||||||||  ||||||||  | |||||| | || ||||  | ||||    
T  30942954 agttattcagtgtttgatttataaaactgtttcagggacagaacaaattggaggcaagagacgggacaaaaaactgaaatttctgtctctcaccaaacca 30942855  T
Q  318 caacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||||||| |||||  |||| || ||||| ||||||| || ||||||    
T  30942854 caacacaacattttgcctcacatataagttgtctaaaacaccaaaata 30942807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 34559215 - 34559270
Alignment:
Q  195 aaaaataaaggacaaaataacttaagttatacaatgtttgatttgtaaaactgttt 250  Q
    |||||| || ||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  34559215 aaaaatgaaagacaaaacaactttagttatacaatgtttgatttgtaaaacagttt 34559270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 34930070 - 34929933
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| |  | || | ||||| |||||||| |||| |||||||||  | |||||| | |||||  | |||||| ||||||||    
T  34930070 tgtttgatttgtaaaactgtttcagatacagaataaactggaggcaagggacaggacaaaaactcatatttttgttcctcaccaaaccacagcacaactt 34929971  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||   ||  |||||||| |||||||||  |||||||    
T  34929970 tttgccccatatacaagttgtctaaaatatcaaaatag 34929933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 41720903 - 41720850
Alignment:
Q  324 aactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatcca 377  Q
    ||||||||||  ||||||||| |||||||||||||||||||| |||||| ||||    
T  41720903 aactttttgtcccacgtacaaattatctaaaatacaaaaataattttttgtcca 41720850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 365
Target Start/End: Complemental strand, 23328020 - 23327937
Alignment:
Q  283 gacaaaaacataaatttttatccctcattataccacaacacaacttttt-gtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||||||  | |||||| |||||||  | |||||||||||||||||| ||  |||||||||||| |||||||||| ||||||    
T  23328020 gacaaaaactcatatttttgtccctcagcaaaccacaacacaacttttttgtcccacgtacaagttgtctaaaataccaaaata 23327937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 229 - 331
Target Start/End: Original strand, 6973844 - 6973946
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || |  ||||||||  |||||||  |||| |||||||||  | | |||| ||||||   | |||||||||||||||    
T  6973844 tgtttgatttgtaaaactgtttcaggtactggacaaacgggaggcaattgacaggacaaaaactcataattttgtccctcgccaaaccacaacacaactt 6973943  T
Q  329 ttt 331  Q
    |||    
T  6973944 ttt 6973946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 219 - 357
Target Start/End: Complemental strand, 10587200 - 10587062
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccac 318  Q
    |||||||||  ||||||||||||||| || |||  | | | |||||||   ||||| ||||||||||||||||  ||||| || ||| |||||| |||||    
T  10587200 agttatacatcgtttgatttgtaaaattggttcaagaacatgacaaaccaaaggcatgagacaagacaaaaactgaaattattgtccttcattaaaccac 10587101  T
Q  319 aacacaactttttgtatcacgtacaagttatctaaaata 357  Q
    | || || | |||||  |||||| |||||||| ||||||    
T  10587100 atcataattatttgtcccacgtataagttatccaaaata 10587062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 47741338 - 47741281
Alignment:
Q  314 accacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttt 371  Q
    |||||||||||||||| |||    |||||||||||| ||||||||||||||| |||||    
T  47741338 accacaacacaactttctgttcttcgtacaagttatttaaaatacaaaaataattttt 47741281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 7085257 - 7085189
Alignment:
Q  181 tgtttgatctgctaaaaaataaaggacaaaataacttaagttatacaatgtttgatttgtaaaactgtt 249  Q
    |||||||||||||||||||| |||||||  | |||||   ||||||| |||||| ||||||| ||||||    
T  7085257 tgtttgatctgctaaaaaatgaaggacatgacaacttcgattatacattgtttgctttgtaagactgtt 7085189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 386
Target Start/End: Complemental strand, 43739567 - 43739459
Alignment:
Q  278 gacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatcca 377  Q
    |||| |||||||||  ||||| || |||||||  | ||||||||||||| ||||||  ||| |||||||| |||||||||  ||||||   |||||||||    
T  43739567 gacatgacaaaaactgaaattattgtccctcaccaaaccacaacacaacattttgtcccacatacaagttgtctaaaatattaaaataacattttatcca 43739468  T
Q  378 tcaaaaatt 386  Q
      |||||||    
T  43739467 caaaaaatt 43739459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 1587 - 1724
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||| ||||||||||||||  |||||||| |||||||  | |||||||||||||||    
T  1587 tgtttgatttgtaaaactgtttcaaggataggacaaactggaggcaagggacaagacaaaaactgaaatttttgtccctcaccaaaccacaacacaactt 1686  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| ||||||| || |||||||    
T  1687 tttgtcccacgtacaagttgtctaaaaaaccaaaatag 1724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 15324 - 15168
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| ||||||||||||||  | |||||| |||| ||  | |||||||||||||||    
T  15324 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgtcccccaccaaaccacaacacaactt 15225  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| ||||||||||||| |||||||||| |||||||| |||| |||  |||||||    
T  15224 tttgtctcacgtacaagttgtctaaaatactaaaatagtattttgtcccccaaaaat 15168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 7396103 - 7396258
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||| |||||||||||| | ||||| || || ||||  |||| |||||||||| |||| ||  ||||||| || ||||| |||||||||    
T  7396103 tgtttgatttgtaaagctgtttctgggacatgacaagctggaagcaatggacaggacaaaaacagaaatcttg-tccctcactaaaccactacacaactt 7396201  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  7396202 tttgtctcacgtacaagttatctaaaatacaaaaatagtgttttgtccatcaaaaat 7396258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 3259835 - 3259679
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| ||||||||||||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  3259835 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 3259736  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||| |  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  3259735 tttatcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 3259679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 11279280 - 11279124
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||||||||  | | |||||||||| |||||| | |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  11279280 tgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcatgggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 11279181  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| ||||||||||||| |||||||||| |||||||  |||||||| ||||||||    
T  11279180 tttgtctcacgtacaagttgtctaaaataccaaaatagcattttatccctcaaaaat 11279124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 219 - 385
Target Start/End: Original strand, 27824620 - 27824783
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccac 318  Q
    |||| |||| |||||||||||||||||||||| ||||| |||||||||| |||||||| || |||| || || | |||   || ||||||||||||||||    
T  27824620 agttgtacagtgtttgatttgtaaaactgtttttgggaaaggacaaactagaggcaagggataagagaagaaaaaaaa---ttgtccctcattataccac 27824716  T
Q  319 aacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    | |||||||||||||  ||||||| ||||||| ||||||||||||||| ||||| |||| |||||||    
T  27824717 atcacaactttttgtcccacgtacgagttatccaaaatacaaaaatagctttttgtccaacaaaaat 27824783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 10960152 - 10960015
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | ||||||||||  ||||||| |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  10960152 tgtttgatttgtaaaactgtttcaggtacaggacaaactgaaggcaagggacaggacaaaaactcatatttttgtccctcaacaaaccacaacacaactt 10960053  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| ||||||||||||||||||    
T  10960052 tttgtcccacgtacaagttgtctaaaatacaaaaatag 10960015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 10324088 - 10324224
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| ||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  10324088 tgtttaatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 10324187  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||| ||||||||||||| |||||||||| ||||||    
T  10324188 tttgtctcacgtacaagttgtctaaaataccaaaata 10324224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 17867987 - 17867831
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| ||||||| ||||||  | |||||| |||||||| | |||||| ||||||||    
T  17867987 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagataaaaactcatatttttgtccctcatcaaaccacagcacaactt 17867888  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  ||||||||| || |||||||||| |||||||  |||| ||| ||||||||    
T  17867887 tttgtcccacgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaat 17867831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 17877770 - 17877614
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| ||||||| ||||||  | |||||| |||||||| | |||||| ||||||||    
T  17877770 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagataaaaactcatatttttgtccctcatcaaaccacagcacaactt 17877671  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  ||||||||| || |||||||||| |||||||  |||| ||| ||||||||    
T  17877670 tttgtcccacgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaat 17877614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 166900 - 167037
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| ||||  ||||||||  | |||||| |||||||  | |||||||||||||||    
T  166900 tgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacataacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 166999  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||| |||||||    
T  167000 tttgtcccacgtacaagttgtctaaaataccaaaatag 167037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 182 - 366
Target Start/End: Complemental strand, 17443461 - 17443277
Alignment:
Q  182 gtttgatctgctaaaaaataaaggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagaca 281  Q
    ||||||| ||||||||||| |||||||  | ||||| |||| | || |||||||||||||||||  |||| || | |||||||||| || ||||| ||||    
T  17443461 gtttgatttgctaaaaaatgaaggacaggacaactttagttgtccagtgtttgatttgtaaaaccatttcaggtacaggacaaactagatgcaagggaca 17443362  T
Q  282 agacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
     |||||||||  | ||||||||||||||  | ||||||  ||||||||||||  |||||||||||| |||||||||| |||||||    
T  17443361 ggacaaaaactcatatttttatccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 17443277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 24203514 - 24203378
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||  || | |||||||||| ||||||||||||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  24203514 tgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 24203415  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  24203414 tttgtcccacgtacaagttgtctaaaataccaaaata 24203378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 24242816 - 24242660
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| ||||  ||||||||  | |||||| |||||||  | |||||| ||||||||    
T  24242816 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacacaacaaaaactcatatttttgtccctcaccaaaccacatcacaactt 24242717  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  24242716 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 24242660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 205 - 385
Target Start/End: Original strand, 32409805 - 32409985
Alignment:
Q  205 gacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatc 304  Q
    |||| |||||||  |||||| || ||||||||||||||||||||||| || | |||||||||| ||| |||| |||| |||||||||  | |||||| ||    
T  32409805 gacagaataactctagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggacaggacaaaaactcatatttttgtc 32409904  T
Q  305 cctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  | |||||| |||||||||||||  |||  ||||||| |||||||||| |||||||| |||| ||| ||||||||    
T  32409905 cctcaccaaaccacatcacaactttttgtcccactcacaagttgtctaaaataccaaaatagtattttgtccctcaaaaat 32409985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 181 - 385
Target Start/End: Complemental strand, 2615101 - 2614892
Alignment:
Q  181 tgtttgatctgctaaaaaataaaggacaa-----aataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaa 275  Q
    |||||||| ||||||||||| ||||||||     || ||||  |||| | || |||||||||||||||| |||||| || | |||||||| | |||||||    
T  2615101 tgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccactgtttgatttgtaaaattgtttcaggtacaggacaaattggaggcaa 2615002  T
Q  276 gagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatc 375  Q
    | |||| |||||||||  | |||||| |||||||  | |||||| |||||||||||||  |||||||||||| |||||||||| |||||||  |||| ||    
T  2615001 gggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 2614902  T
Q  376 catcaaaaat 385  Q
    | ||||||||    
T  2614901 cctcaaaaat 2614892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 11382214 - 11382060
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| ||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| ||  |||  | |||||||||||||||    
T  11382214 tgtttaatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtc--tcaccaaaccacaacacaactt 11382117  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| ||||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  11382116 tttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 11382060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 9902635 - 9902771
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| ||||||  ||||||||| || |||||||||||| |||| ||| |||| |||||||||  | |||||| |||||||||| |||||| ||||||||    
T  9902635 tgtttaatttgttgaactgtttcaggtataggacaaactagaggtaagggacaggacaaaaactgatatttttgtccctcattaaaccacagcacaactt 9902734  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  9902735 tttgtcccacgtacaagttgtctaaaataccaaaata 9902771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 15276912 - 15277070
Alignment:
Q  227 aatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaac 326  Q
    ||||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||    
T  15276912 aatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaac 15277011  T
Q  327 tttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| |  |||||||||||| ||||||| |  |||||||  |||| ||| ||||||||    
T  15277012 tttttttcccacgtacaagttgtctaaaagaacaaaatagcattttgtccctcaaaaat 15277070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 229 - 355
Target Start/End: Original strand, 18597135 - 18597261
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| |||||| |||||||  |||||||| |||| ||||||| |  |||||||| |||||||  | |||||||||||||||    
T  18597135 tgtttgatttgtaaaactgtttcagggatatgacaaaccggaggcaagggacatgacaaaatctgaaatttttgtccctcaccaaaccacaacacaactt 18597234  T
Q  329 tttgtatcacgtacaagttatctaaaa 355  Q
    |||||  |||||| ||||| |||||||    
T  18597235 tttgtcccacgtataagttgtctaaaa 18597261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 10485309 - 10485172
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| | |||| || | |||||||||| ||||||||||||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  10485309 tgtttgatttgtaaaattatttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacagcacaactt 10485210  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||  |||||||    
T  10485209 tttgtcccacgtacaagttgtctaaaatatcaaaatag 10485172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 32132357 - 32132494
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||  || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  |  ||||||||||||||    
T  32132357 tgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaatccacaacacaactt 32132456  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||  |||||||    
T  32132457 tttgtcccacgtacaagttgtctaaaatatcaaaatag 32132494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 3932784 - 3932920
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| | || |||||||||  | |||||| || ||||  | |||||| ||||||||    
T  3932784 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggggcaggacaaaaactcatatttttgtctctcaccaaaccacatcacaactt 3932883  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  3932884 tttgtcccacgtacaagttgtctaaaataccaaaata 3932920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 226 - 362
Target Start/End: Complemental strand, 29054511 - 29054375
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||||||||||||||||||| ||||| || | |||||||| | || ||||| |||| |||||||||   ||||||| ||||||   | |||||| |||||    
T  29054511 caatgtttgatttgtaaaacagtttcaggaacaggacaaattggaagcaagggacatgacaaaaactacaatttttgtccctcgccaaaccacagcacaa 29054412  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaa 362  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  29054411 ctttttgtctcacgtacaagttgtctaaaatacaaaa 29054375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 203 - 385
Target Start/End: Original strand, 11613742 - 11613924
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    |||||| || ||||| |||| | || ||||||||||||||||||||||| || | |||||||| | ||| ||||  ||| |||||||||  | ||||||     
T  11613742 aggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaaatggagacaaggaacaggacaaaaactcatatttttg 11613841  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||||  | |||||| |||||||||||||  |||||||||||| | |||||||| |||||||  |||| ||| ||||||||    
T  11613842 tccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtataaaataccaaaatagcattttgtccctcaaaaat 11613924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 3379862 - 3379725
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||| |||||||||||| |  | |||||||||| |||||||||||||||||||||||  | |||||| || ||||  | |||| | ||||||||    
T  3379862 tgtttgatttataaaactgtttcagatacaggacaaactggaggcaagagacaagacaaaaactgatatttttgtcgctcaccaaaccatagcacaactt 3379763  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||| |||| |||||||| ||| |||||| |||||||    
T  3379762 tttgtctcacatacaagttgtcttaaataccaaaatag 3379725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 15277257 - 15277394
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| |||||  || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  15277257 tgtttgatttgtaaaattgtttaaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactt 15277356  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||| |  |||||||||||| |||||||||| |||||||    
T  15277357 tttatcccacgtacaagttgtctaaaataccaaaatag 15277394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 32860203 - 32860067
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||| ||||| |||| | |||||||| |||||||| |||| ||||||| |   ||||||| ||| ||   | |||||| |||||| |    
T  32860203 tgtttgatttgtaaaacagtttcagggacatgacaaactggaggcaagggacatgacaaaagctgcaatttttgtccatcgccaaaccacagcacaacct 32860104  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  32860103 tttgtctcacgtacaagttttctaaaatacaaaaata 32860067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 34176982 - 34176826
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||| |||| |||||||||  | |||||| || ||||  | | |||| ||||||||    
T  34176982 tgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagtgacatgacaaaaactcatatttttgtctctcaccaaatcacagcacaactt 34176883  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||  |||||||||| |||||||  |||| ||| ||||||||    
T  34176882 tttgtcccacgtacaagtagtctaaaataccaaaatagcattttgtccctcaaaaat 34176826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 183 - 365
Target Start/End: Complemental strand, 9614177 - 9613990
Alignment:
Q  183 tttgatctgctaaaaaataaaggacaaaataa-----cttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaaga 277  Q
    |||||||||||||||||| ||||||| || ||     ||| |||| ||||||||||||||||||||||||||||  ||| |||| ||||| ||||||||     
T  9614177 tttgatctgctaaaaaatgaaggacataacaagaaaacttcagttgtacaatgtttgatttgtaaaactgtttcaaggacaggataaactggaggcaagg 9614078  T
Q  278 gacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||| |||||||    || ||||| |  |||| || ||| |||||||| |||||||  |||||| ||||| |||||||||| ||||||    
T  9614077 gacatgacaaaatttgaagtttttgttactcactaaaccgcaacacaattttttgttccacgtataagttgtctaaaatactaaaata 9613990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 14925433 - 14925570
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| || | ||| |||| |||||||||  | |||||| |||||||  | ||||||  |||||||    
T  14925433 tgtttgatttgtaaaactgtttcaggtacaggacaaactagatgtaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactt 14925532  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  ||| |||||||| |||||||||| |||||||    
T  14925533 tttgtcccacttacaagttgtctaaaataccaaaatag 14925570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 386
Target Start/End: Original strand, 35004105 - 35004262
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||| |||| | ||| | || ||||  ||| |||||||||||||||||||  || ||||| || |||||   ||||||||||||||     
T  35004105 tgtttgatttgtaaaacggtttataggacaagataaaccggagacaagagacaagacaaaaactaaattttttgtctctcatataaccacaacacaactc 35004204  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaatt 386  Q
    |||||  |||||||||||| |||||||||  ||||||| ||||| || || |||||||    
T  35004205 tttgtcccacgtacaagttttctaaaatatcaaaatagatttttgtcaataaaaaatt 35004262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 11212409 - 11212273
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||  ||| |||| |||||||||  | | |||| |||||||  | ||||||||| ||| |    
T  11212409 tgtttgatttgtaaaactgtttcaggtacaggacaaactggagataagggacatgacaaaaactcatacttttgtccctcaccaaaccacaacataacct 11212310  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||| |||||| |||||| |||||||||| ||||||    
T  11212309 tttgtctcacgtgcaagttgtctaaaataccaaaata 11212273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 31870074 - 31870214
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggata---ggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||||||||||||||||||| || || | |   | ||||||| |||||||| ||||| ||||||||  | |||||| |||||||  | ||||||||||||    
T  31870074 tgtttgatttgtaaaactgtctcaggaacaacagaacaaactagaggcaagggacaaaacaaaaactgatatttttgtccctcaccaaaccacaacacaa 31870173  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||||||  |||||| | ||| ||||||||||||||||||    
T  31870174 ctttttgtcccacgtataggttgtctaaaatacaaaaatag 31870214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 213 - 404
Target Start/End: Complemental strand, 2122892 - 2122700
Alignment:
Q  213 aacttaagttatacaatgtttgatttgtaaaactgtttctgggat-aggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcatt 311  Q
    |||||||||| ||| ||||||||||| |||||| |||| |  ||  |||||||| |  ||| |||||||| |||||||| |||| ||||| |||   | |    
T  2122892 aacttaagttgtacgatgtttgatttataaaacagtttttttgaacaggacaaattgaaggtaagagacaggacaaaaatataattttttgtccgctact 2122793  T
Q  312 ataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaattattcaataccataaaagt 404  Q
    | |||||||||||||||||||| |||   | || ||||||||||| ||| ||||| ||||| || | ||||||||||||||||  ||||||||    
T  2122792 aaaccacaacacaactttttgtctcatcgataaattatctaaaattcaataatagctttttttcaaccaaaaattattcaatataataaaagt 2122700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 226 - 366
Target Start/End: Complemental strand, 18057674 - 18057534
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||||||||||||||||||||||||  |  | | |||||||| || | ||| |||| |||||||||  | |||||| |||||||  | ||||||  ||||    
T  18057674 caatgtttgatttgtaaaactgtttgagatacatgacaaactagatgtaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaa 18057575  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||||||  |||||||||||| |||||||||| |||||||    
T  18057574 ctttttgtcccacgtacaagttgtctaaaataccaaaatag 18057534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 4494091 - 4494221
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagac-aaaaacataaatttttatccctcattataccacaacacaact 327  Q
    |||||||||||||| ||| |||| || | |||||||||| |||||||| |||| ||| ||||||  | |||||| |||||||  | ||||||  ||||||    
T  4494091 tgtttgatttgtaagactctttcaggtacaggacaaactggaggcaagtgacaggacaaaaaactcatatttttgtccctcaccaaaccacagtacaact 4494190  T
Q  328 ttttgtatcacgtacaagttatctaaaatac 358  Q
    ||||||  |||||||||||| ||||||||||    
T  4494191 ttttgtcccacgtacaagttgtctaaaatac 4494221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 9200348 - 9200445
Alignment:
Q  213 aacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggc-aagagacaagacaaaaacataaatttttatccctca 309  Q
    |||| ||||| |||||||||||||||||||||||||||    || | |||||||| ||||| ||||||||||||||||||| ||||| || |||||||    
T  9200348 aactcaagttgtacaatgtttgatttgtaaaactgttttaaagacatgacaaactagaggctaagagacaagacaaaaacaaaaattcttctccctca 9200445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 11675351 - 11675480
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||  |||| |||||||||  | |||||| || ||||  | |||| ||||||||||    
T  11675351 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaggacaaaaactgatatttttgtctctcaccaaaccataacacaactt 11675450  T
Q  329 tttgtatcacgtacaagttatctaaaatac 358  Q
    ||| |  |||||||||| | | ||||||||    
T  11675451 tttatcccacgtacaagctttgtaaaatac 11675480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 384
Target Start/End: Original strand, 29424652 - 29424699
Alignment:
Q  337 acgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaa 384  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  29424652 acgtacaagttatctaaaatacaaaaatagttttttgtccaccaaaaa 29424699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 365
Target Start/End: Original strand, 8177809 - 8177994
Alignment:
Q  184 ttgatctgctaaaaaataaaggaca-----aaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagag 278  Q
    ||||| |||||||||||||||||||     ||| ||||| | |||| |  |||||||||| |||||||||||| || | |  ||||||| |||||||| |    
T  8177809 ttgatttgctaaaaaataaaggacatgaaaaaacaacttcaattatccggtgtttgatttataaaactgtttcaggtacaaaacaaactggaggcaaggg 8177908  T
Q  279 acaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||| || |||||   | |||||| ||||| |  | ||||||||||||||||||||  ||||| |||||| |||||||||| ||||||    
T  8177909 acaggataaaaatg-atatttttgtcccttaccaaaccacaacacaactttttgtcccacgttcaagttgtctaaaataccaaaata 8177994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 260 - 355
Target Start/End: Original strand, 34683993 - 34684086
Alignment:
Q  260 gacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaa 355  Q
    |||||||| |||||||| |||| |||||||||  |  ||||| |||||||  | ||||||||||||||||||||  |||||||||||| |||||||    
T  34683993 gacaaactggaggcaagggacacgacaaaaactca--tttttgtccctcaccaaaccacaacacaactttttgttccacgtacaagttgtctaaaa 34684086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 229 - 308
Target Start/End: Complemental strand, 10552897 - 10552818
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctc 308  Q
    ||||| |||||||||| | ||| ||  ||| ||||||||||||||||| |||| || | |||||||||||||||||||||    
T  10552897 tgtttaatttgtaaaattatttatgaaatatgacaaacttgaggcaagggacatgatagaaacataaatttttatccctc 10552818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 290
Target Start/End: Complemental strand, 2122987 - 2122902
Alignment:
Q  205 gacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaa 290  Q
    ||||||| || | |||||||||||||||||||||| |||| ||||||||| | | || ||||| |||| || ||||| ||||||||    
T  2122987 gacaaaacaattgaagttatacaatgtttgatttgaaaaattgtttctggaacaagataaactggaggtaaaagacaggacaaaaa 2122902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 262 - 385
Target Start/End: Complemental strand, 3290789 - 3290668
Alignment:
Q  262 caaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaa 361  Q
    |||||| |||||||| |||| |||||||||  | |||||| ||||| |  | |||||||||||||||||  |  |||||| ||||| |||||||||| ||    
T  3290789 caaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttt--tcccacgtataagttgtctaaaataccaa 3290692  T
Q  362 aatagttttttatccatcaaaaat 385  Q
    |||||  |||| ||| ||||||||    
T  3290691 aatagcattttgtccctcaaaaat 3290668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 355
Target Start/End: Complemental strand, 23636297 - 23636249
Alignment:
Q  307 tcattataccacaacacaactttttgtatcacgtacaagttatctaaaa 355  Q
    |||||| |||||||||||| ||||||| ||||||||||||||| |||||    
T  23636297 tcattaaaccacaacacaaatttttgtctcacgtacaagttatttaaaa 23636249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 357
Target Start/End: Original strand, 1004471 - 1004527
Alignment:
Q  297 tttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaata 357  Q
    ||||| || ||||||| ||||||||||||||||||||    ||||||||||||||||||||    
T  1004471 tttttgtcactcattaaaccacaacacaactttttgt----cgtacaagttatctaaaata 1004527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 8342584 - 8342630
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaa 265  Q
    |||| |||| ||||| ||||||||||||||||||||||| |||||||    
T  8342584 agttgtacagtgtttaatttgtaaaactgtttctgggatgggacaaa 8342630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 5526325 - 5526358
Alignment:
Q  173 ttagggtttgtttgatctgctaaaaaataaagga 206  Q
    |||||||||||||||||| |||||||||||||||    
T  5526325 ttagggtttgtttgatctactaaaaaataaagga 5526358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 343 - 383
Target Start/End: Original strand, 14502678 - 14502718
Alignment:
Q  343 aagttatctaaaatacaaaaatagttttttatccatcaaaa 383  Q
    ||||| |||||||||| |||||||||||||||| |||||||    
T  14502678 aagttgtctaaaatactaaaatagttttttatcaatcaaaa 14502718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 2e-35; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 181 - 357
Target Start/End: Original strand, 34351252 - 34351428
Alignment:
Q  181 tgtttgatctgctaaaaaataaaggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagac 280  Q
    |||||||| ||||||| ||||||||| || | || | |||||||| |||| |||||||||||||||||||| |||| | |||||||| |||| || ||||    
T  34351252 tgtttgatttgctaaataataaaggaaaagacaattcaagttataaaatgattgatttgtaaaactgtttcagggacatgacaaactagaggaaatagac 34351351  T
Q  281 aagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaata 357  Q
    | |||||||||| ||||| || |||||||| | ||||||||||||||||||||  ||| |||||||| |||||||||    
T  34351352 acgacaaaaacaaaaattattgtccctcatcaaaccacaacacaactttttgtcgcacatacaagttgtctaaaata 34351428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 29585028 - 29584872
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  29585028 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 29584929  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  29584928 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccttcaaaaat 29584872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 34026820 - 34026664
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || |||||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||||||||| ||    
T  34026820 tgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaattt 34026721  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  34026720 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 34026664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 182 - 386
Target Start/End: Original strand, 21221241 - 21221449
Alignment:
Q  182 gtttgatctgctaaaaaataaaggacaa-----aataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaag 276  Q
    ||||||| |||||||||||||||||||      || ||||  |||| | |||| ||||||||||||||||||||| || | ||||||| || ||||||||    
T  21221241 gtttgatttgctaaaaaataaaggacaggacagaacaactctagttgtccaatatttgatttgtaaaactgtttcaggtacaggacaa-ctggaggcaag 21221339  T
Q  277 agacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatcc 376  Q
     |||| |||||||||  | |||||| |||||||  | |||||||||||||||||||| ||||||||||||| |||||||||| |||||||  |||| |||    
T  21221340 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtcc 21221439  T
Q  377 atcaaaaatt 386  Q
     |||||||||    
T  21221440 ctcaaaaatt 21221449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 21374083 - 21373946
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||| |||| ||||||| |  | |||||| |||||||  | |||||||||||||||    
T  21374083 tgtttgatttgtaaaactgtttcaggtacaggacaaacttgaggcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacaacacaactt 21373984  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||| |||||||    
T  21373983 tttgtcccacgtacaagttgtctaaaataccaaaatag 21373946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 28675943 - 28675787
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| || | |||||||||  | |||||| |||||||  | |||||||||||||||    
T  28675943 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 28675844  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  28675843 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 28675787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 44000414 - 44000258
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| |||||||||||||||| ||||| | || |||||  ||||||  |||| |||||||||| || ||||| ||||||| || |||||| ||||| ||    
T  44000414 tgtttcatttgtaaaactgtttttgggaaatgataaactcaaggcaaaggacatgacaaaaacagaattttttttccctcactaaaccacatcacaattt 44000315  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||||||| |||||||||||||||||||| |||| |||||||    
T  44000314 tttgtcccacgtacaagttatctgaaatacaaaaatagttttttgtccaccaaaaat 44000258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 44117092 - 44116936
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||| ||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||| | |||||  ||||||||    
T  44117092 tgtttgatttgtaaaaccgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccactgcacaactt 44116993  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| ||||||||||||||||||  |||| ||| ||||||||    
T  44116992 tttgtcccacgtacaagttgtctaaaatacaaaaatagcattttgtccctcaaaaat 44116936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 203 - 366
Target Start/End: Complemental strand, 19906941 - 19906778
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    |||| |||| ||||| |||| | || |||||||||||||||| |||||| |||| || ||||||| |||||||| |||| |||||||||  ||||||||     
T  19906941 aggataaaacaacttcagttgtccagtgtttgatttgtaaaattgtttcagggacagaacaaactggaggcaagggacaggacaaaaactgaaatttttg 19906842  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||||  | |||||| ||||||||||||| ||||||||||||| ||||||| || |||||||    
T  19906841 tccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaacaccaaaatag 19906778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 226 - 385
Target Start/End: Original strand, 20609577 - 20609736
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||||||||||||||||||||||||| || | |||||||||| | |||||| |||| |||||||||  | |||||| |||||||  | |||||| |||||    
T  20609577 caatgtttgatttgtaaaactgtttcaggtacaggacaaactggtggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaa 20609676  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  20609677 ctttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 20609736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 25860353 - 25860482
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  25860353 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacatcacaactt 25860452  T
Q  329 tttgtatcacgtacaagttatctaaaatac 358  Q
    ||||| ||||||||||||| ||||||||||    
T  25860453 tttgtctcacgtacaagttgtctaaaatac 25860482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 182 - 366
Target Start/End: Original strand, 33364658 - 33364847
Alignment:
Q  182 gtttgatctgctaaaaaataaaggacaa-----aataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaag 276  Q
    ||||||| ||||||||||| ||||||||     || ||||| |||| | || ||||| ||||||||||||||||| || | |||||||||| ||||||||    
T  33364658 gtttgatttgctaaaaaatgaaggacaagacagaacaacttcagttgtccagtgttttatttgtaaaactgtttcaggtacaggacaaactggaggcaag 33364757  T
Q  277 agacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||| |||||||||  | ||||||  ||||||  | |||||| ||||||||||||| ||||||||||||| |||||||||  |||||||    
T  33364758 agacaggacaaaaactgatatttttgcccctcagcaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatatcaaaatag 33364847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 1344639 - 1344795
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||| |||| || | |||||||||| |||||||| |||| |||| ||||  | |||||| |||||||  | |||||| ||||||||    
T  1344639 tgtttgatttgtaaaactatttcaggtacaggacaaactggaggcaagggacaggacagaaactcatatttttgtccctcaccaaaccacagcacaactt 1344738  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| ||||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  1344739 tttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 1344795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 38213507 - 38213371
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| |||||| || ||||||||| || ||||||||||||| |||||||||  | |||||| || ||||  | |||||||||||||||    
T  38213507 tgtttgatttgtaaaattgtttcaggtataggacaatctggaggcaagagacaggacaaaaactcatatttttgtcactcacgaaaccacaacacaactt 38213408  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  38213407 tttgtcccacgtacaagttgtctaaaataccaaaata 38213371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 40094656 - 40094500
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | || ||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  40094656 tgtttgatttgtaaaactgtttcaggtacagaacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactt 40094557  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| |||||||||| || |||||||||| |||||||  |||| ||| ||||||||    
T  40094556 tttgtttcacgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaat 40094500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 203 - 366
Target Start/End: Complemental strand, 24571460 - 24571297
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    ||||||||| ||||  |||| | || ||||||||||||||||||||||| || | | |||||||| |||||||| |||| |||||||||  | ||||||     
T  24571460 aggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatatttttg 24571361  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||||  | |||||| |||||||||||||  || ||||||||| ||||||||||||||||||    
T  24571360 tccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaatacaaaaatag 24571297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 2135223 - 2135086
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| ||||  ||||||||  | |||||| |||||||  | |||||| ||||||||    
T  2135223 tgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 2135124  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  ||||||||| ||||||||||||| |||||||    
T  2135123 tttgtcccacgtacaaattatctaaaataccaaaatag 2135086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 31882954 - 31883091
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| ||||||||||||| |||||||||  | |||||| | |||||  | |||||| ||||||||    
T  31882954 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacacgacaaaaactgatatttttgtgcctcagcaaaccacagcacaactt 31883053  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||  |||||||    
T  31883054 tttgtcccacgtacaagttgtctaaaatatcaaaatag 31883091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 12349103 - 12349259
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| || ||||  | |||||| ||||||||    
T  12349103 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaaccacagcacaactt 12349202  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    | |||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  12349203 tatgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 12349259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 39052770 - 39052906
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||  |||| |||||||||  | |||||| || ||||  | |||||||||||||||    
T  39052770 tgtttgatttgtaaaactgtttcaggcacaggacaaactggaggcaatggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactt 39052869  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  39052870 tttgtcccacgtacaagttgtctaaaataccaaaata 39052906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 42636335 - 42636471
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||  || |||||||||||| |||||||| ||||  ||||||||  | |||||| |||||||  | |||||| ||||||||    
T  42636335 tgtttgatttgtaaaactgttttaggtataggacaaactggaggcaagggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 42636434  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  42636435 tttgtcccacgtacaagttgtctaaaataccaaaata 42636471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 51259712 - 51259848
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||  ||||||||    
T  51259712 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacggcacaactt 51259811  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  51259812 tttgtcccacgtacaagttgtctaaaataccaaaata 51259848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 226 - 385
Target Start/End: Original strand, 53557724 - 53557883
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||||||||||||||||||||||||  || | |||||||||| |||||||  |||| |||||||||  | | |||| |||||||  | |||||  |||||    
T  53557724 caatgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaatggacaggacaaaaactcatagttttgtccctcaccaaaccactgcacaa 53557823  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||||| ||||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  53557824 ctttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccttcaaaaat 53557883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 50678951 - 50678813
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||| ||||||||||| || | |||||||||| |||||||   ||| |||||||||  | |||||| || ||||  | |||||||||||||||    
T  50678951 tgtttgatttgaaaaactgtttcaggtacaggacaaactggaggcaaagaacaggacaaaaactgatatttttgtctctcaccaaaccacaacacaactt 50678852  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagt 367  Q
    ||||| ||||||||||||| |||||||||| ||||||||    
T  50678851 tttgtctcacgtacaagttgtctaaaataccaaaatagt 50678813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 3864607 - 3864744
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||  |||| |||||||||  | |||||| ||||||   | |||||||||||||||    
T  3864607 tgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactt 3864706  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||| |||||||    
T  3864707 tttgtcccacgtacaagttgtctaaaataccaaaatag 3864744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 47958364 - 47958520
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| |||||| || | |||| ||||| |||||||| |||| |||||||||  | |||||| |||||||  | || ||| ||||||||    
T  47958364 tgtttgatttgtaaaattgtttcaggtacaggaaaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaactacagcacaactt 47958463  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  47958464 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 47958520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 49748843 - 49748979
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||  |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  49748843 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacatgacaaaaactgatatttttgtccctcaccaaaccacaacacaactt 49748942  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| | | |||||| ||||||    
T  49748943 tttgtcccacgtacaagttgttttaaataccaaaata 49748979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 25927257 - 25927395
Alignment:
Q  227 aatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaac 326  Q
    |||||||||||||||||||||||||    | |||||||||| |||||||| |||| |||||||||  | |||||| ||||| |  | | |||||||||||    
T  25927257 aatgtttgatttgtaaaactgtttcaaatacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaacacaacacaac 25927356  T
Q  327 tttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||||  |||||||||||| |||||||||| ||||||    
T  25927357 tttttgtcccacgtacaagttgtctaaaataccaaaata 25927395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 3867581 - 3867718
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| |||| || ||| ||| ||| ||||||||| ||||||| |  |||||||| |||||||  | |||||| ||||||||    
T  3867581 tgtttgatttgtaaaactgtttcagggacagaacatactggagacaagagacatgacaaaacctgaaatttttgtccctcaccaaaccacagcacaactt 3867680  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||   ||||||||||| ||||||| || |||||||    
T  3867681 tttgtcctacgtacaagttttctaaaacaccaaaatag 3867718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 29646219 - 29646082
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||  || | | || ||||| |||||||| || | |||||||||||| |||||| |||||||  | |||||| ||||||||    
T  29646219 tgtttgatttgtaaaactgttttaggtacacgataaactggaggcaagggataggacaaaaacatatatttttgtccctcaccaaaccacatcacaactt 29646120  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| | |||||||| |||||||    
T  29646119 tttgtcccacgtacaagttgtttaaaataccaaaatag 29646082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 50386388 - 50386525
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| ||||||||||||| ||||||||   | |||||| | |||||  | |||||| ||||||||    
T  50386388 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacatgacaaaaattgatatttttgtgcctcaacaaaccacagcacaactt 50386487  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||   ||||||||||| |||||||||  |||||||    
T  50386488 tttgtcctacgtacaagttgtctaaaatatcaaaatag 50386525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 51296734 - 51296597
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| ||||||||||||||||| || | |||||||||| |||||||  |||| |||||||||  | |||||| |||||||  | |||||||||||| ||    
T  51296734 tgtttaatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattt 51296635  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||   | ||||||||| ||||||||||||||||||    
T  51296634 tttgtcctaagtacaagttgtctaaaatacaaaaatag 51296597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 182 - 385
Target Start/End: Original strand, 4851343 - 4851544
Alignment:
Q  182 gtttgatctgctaaaaaataaaggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagaca 281  Q
    ||||||| || |||||||| ||||||| || ||||  |||| | || ||||||||||||||||||||||  || | | |||||  | |||||||| ||||    
T  4851343 gtttgatttgttaaaaaatgaaggacagaacaactctagttgtccagtgtttgatttgtaaaactgttttaggtacaagacaatttggaggcaagggaca 4851442  T
Q  282 agacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaa 381  Q
     |||||||||  |  ||||| |||||||  |  |||||||||||||||||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||    
T  4851443 ggacaaaaactca--tttttgtccctcaccaacccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 4851540  T
Q  382 aaat 385  Q
    ||||    
T  4851541 aaat 4851544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 203 - 291
Target Start/End: Original strand, 41682959 - 41683047
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaac 291  Q
    ||||||||| ||||| |||| | || ||||||||||||||||||||||| || | |||||||||| |||||||||||||||||||||||    
T  41682959 aggacaaaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaagacaaaaac 41683047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 203 - 366
Target Start/End: Complemental strand, 3964467 - 3964304
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    |||||| || ||||| |||| | || |||||||||||||||||||||||  ||| | |||||| | ||||||||  ||  |||||||||  ||||||||     
T  3964467 aggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcatggacatgacaaattggaggcaaggaactggacaaaaactgaaatttttg 3964368  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||||  | |||||| |||||||||||||  || ||||||||| |||||||||| |||||||    
T  3964367 tccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaataccaaaatag 3964304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 20255197 - 20255062
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| ||||||||  ||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  20255197 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggaacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 20255098  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
     ||||  ||| |||||||| |||||||||| ||||||    
T  20255097 cttgtcccac-tacaagttgtctaaaataccaaaata 20255062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 229 - 347
Target Start/End: Original strand, 51925140 - 51925258
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| ||||||||||||||||| || | | |||||||| |||||||  |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  51925140 tgtttaatttgtaaaactgtttcaggtacatgacaaactggaggcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactt 51925239  T
Q  329 tttgtatcacgtacaagtt 347  Q
    |||||  ||||||||||||    
T  51925240 tttgtcccacgtacaagtt 51925258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 24721638 - 24721501
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| |||| || ||||||| |||| ||  |||| |||||||||  |||||||  | |||||  | |||||||||||||||    
T  24721638 tgtttgatttgtaaaactgtttcagggacagaacaaactggaggtaaaggacaggacaaaaactaaaattttggtacctcaacaaaccacaacacaactt 24721539  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||| |  ||| |||||||| ||||||| || |||||||    
T  24721538 tttatcccacatacaagttgtctaaaacaccaaaatag 24721501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 260 - 385
Target Start/End: Original strand, 26282350 - 26282475
Alignment:
Q  260 gacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaataca 359  Q
    |||||||| |||| |||||||  ||||||||| || |||||| || ||||| | |||||| |||||||||||||  |||||| ||||| ||||||||||     
T  26282350 gacaaactggaggtaagagacgggacaaaaacttatatttttgtctctcatcaaaccacagcacaactttttgtcccacgtataagttgtctaaaatacc 26282449  T
Q  360 aaaatagttttttatccatcaaaaat 385  Q
    |||||||  |||| ||| ||||||||    
T  26282450 aaaatagcattttgtccctcaaaaat 26282475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 227 - 364
Target Start/End: Original strand, 28624851 - 28624987
Alignment:
Q  227 aatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaac 326  Q
    |||||||||||||||||| ||||| || || | || ||||| ||| ||||||| | || |||| || |||||||| |||||||||| | ||||||| ||     
T  28624851 aatgtttgatttgtaaaattgtttatgtgacatgataaactggagacaagagataggataaaa-cagaaatttttgtccctcattaaagcacaacataaa 28624949  T
Q  327 tttttgtatcacgtacaagttatctaaaatacaaaaat 364  Q
    |||||||   ||||| ||||||||||||||||||||||    
T  28624950 tttttgtcctacgtataagttatctaaaatacaaaaat 28624987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 260 - 404
Target Start/End: Complemental strand, 36772140 - 36771998
Alignment:
Q  260 gacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaataca 359  Q
    ||||||||  |||||||||||||||||||| |  |||||| |  || | | || || |||||||||| ||||||| || ||||||||| ||||||||||     
T  36772140 gacaaactaaaggcaagagacaagacaaaatctaaaatttgt--ccttaactaaactacaacacaaccttttgtaacaagtacaagttgtctaaaatacg 36772043  T
Q  360 aaaatagttttttatccatcaaaaattattcaataccataaaagt 404  Q
    ||||| |  |||| |||| |||||||||||| |||||||||||||    
T  36772042 aaaattgacttttgtccaccaaaaattattcgataccataaaagt 36771998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 232 - 366
Target Start/End: Original strand, 22484678 - 22484812
Alignment:
Q  232 ttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaacttttt 331  Q
    |||||||||||||| ||||| |||| | |||||||| |||||||| |||| ||||||| |   ||||||| | |||    | || |||||||||||||||    
T  22484678 ttgatttgtaaaacagtttcagggacatgacaaactggaggcaagggacatgacaaaagctacaatttttgttccttgccaaactacaacacaacttttt 22484777  T
Q  332 gtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||  |||||| ||||| ||||||||||||||||||    
T  22484778 gtcccacgtataagttgtctaaaatacaaaaatag 22484812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 298 - 404
Target Start/End: Original strand, 14155461 - 14155569
Alignment:
Q  298 ttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatc--catcaaaaattattcaatac 395  Q
    |||||||||||| || | || ||||||||||||||| ||| ||||||||| |||||||||  |||||| | |||| ||  ||  ||||||||||||||||    
T  14155461 ttttatccctcactaaatcataacacaactttttgtctcaagtacaagttgtctaaaatatcaaaataatcttttgtccacaaaaaaaattattcaatac 14155560  T
Q  396 cataaaagt 404  Q
    |||||||||    
T  14155561 cataaaagt 14155569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 229 - 386
Target Start/End: Original strand, 30043765 - 30043920
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccac----aacaca 324  Q
    |||||||||||||||| |||||||||||||| ||| |   ||||||||||  ||||||||||  ||| ||| ||||||||| || |||||    |||| |    
T  30043765 tgtttgatttgtaaaattgtttctgggatagaacatataggaggcaagag--aagacaaaaatgtaattttgtatccctcactaaaccacaactaacata 30043862  T
Q  325 actttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaatt 386  Q
    |||| |||| ||    |||||||||||||||||||||| || |||||| |||||| ||||||    
T  30043863 acttcttgtctc----acaagttatctaaaatacaaaattaattttttgtccatcgaaaatt 30043920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 231 - 366
Target Start/End: Original strand, 54622731 - 54622865
Alignment:
Q  231 tttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttt 330  Q
    ||||||||||||||||||||| || |  | |||||||  | ||||| |||| |||||||||  | |||||| || ||||  | |||||||||||||||||    
T  54622731 tttgatttgtaaaactgtttcaggtactg-acaaactaaatgcaagggacaggacaaaaactcatatttttgtcgctcacgaaaccacaacacaactttt 54622829  T
Q  331 tgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    | |  |||||||||||| |||||||||| |||||||    
T  54622830 tatcccacgtacaagttgtctaaaataccaaaatag 54622865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 365
Target Start/End: Original strand, 39215404 - 39215537
Alignment:
Q  232 ttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaacttttt 331  Q
    ||||||||||||||||||||  | | |||||||||  |||| ||| ||||||||||||||  ||||||||| |||| |    |||| | || || |||||    
T  39215404 ttgatttgtaaaactgtttcaagaacaggacaaaccggaggtaagggacaagacaaaaactgaaatttttaccccttaccgaaccaaatcataatttttt 39215503  T
Q  332 gtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||  |||||||||||| |||||||||| ||||||    
T  39215504 gtcccacgtacaagttgtctaaaataccaaaata 39215537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 3695309 - 3695381
Alignment:
Q  314 accacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaatt 386  Q
    |||||| |||||| ||||||  |||||||||||| |||||||||| |||||||| ||||||||  ||||||||    
T  3695309 accacatcacaaccttttgtcccacgtacaagttgtctaaaataccaaaatagtattttatcccccaaaaatt 3695381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 16145865 - 16145909
Alignment:
Q  341 acaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||||||||||||||||||||||||||||| |||| |||||||    
T  16145865 acaagttatctaaaatacaaaaatagttttttgtccaccaaaaat 16145909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 19190716 - 19190660
Alignment:
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| |||| |||||||||||||||||||||||||||||||||  ||| |||||||    
T  19190716 tttgtctcacatacaagttatctaaaatacaaaaatagttttttgaccaccaaaaat 19190660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 53046605 - 53046665
Alignment:
Q  231 tttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaac 291  Q
    ||||||||||||||||||||| || |||||||||||| |||| ||| |||| |||||||||    
T  53046605 tttgatttgtaaaactgtttcaggtataggacaaactggaggtaagggacaggacaaaaac 53046665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 19190788 - 19190714
Alignment:
Q  294 aaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttt 369  Q
    |||||| | ||||||| || |||||| ||||| ||||||| |||| || |||||||||||||||||||||||||||    
T  19190788 aaatttgtgtccctcactaaaccacatcacaa-tttttgtctcacatataagttatctaaaatacaaaaatagttt 19190714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 229 - 364
Target Start/End: Original strand, 45690838 - 45690968
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||| ||||||||||| || | |||| ||| | |||||||  |||| |||||||||  | |||||| |||||||     ||||| ||||||||    
T  45690838 tgtttgatttgcaaaactgtttcaggtacaggataaattggaggcaaaggacaggacaaaaactgatatttttctccctca-----ccacagcacaactt 45690932  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaat 364  Q
    ||||| ||||| | ||||| |||||||||| |||||    
T  45690933 tttgtctcacgcataagttgtctaaaataccaaaat 45690968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 42547390 - 42547435
Alignment:
Q  317 acaacacaactttttgtatcacgtacaagttatctaaaatacaaaa 362  Q
    ||||||||||||||||| |||||||||||||||| || ||||||||    
T  42547390 acaacacaactttttgtctcacgtacaagttatcaaatatacaaaa 42547435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 203 - 291
Target Start/End: Original strand, 3695213 - 3695301
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaac 291  Q
    ||||||||| ||||  |||| | || ||||||||||||||||||||||  || | | |||||||| |||||||| |||| |||||||||    
T  3695213 aggacaaaacaactctagttgtccagtgtttgatttgtaaaactgttttaggtacatgacaaactggaggcaagggacaggacaaaaac 3695301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 30259035 - 30258963
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaac 291  Q
    |||||||||||||||||||||||||| ||||||   || |||| ||||| |||||||  | ||||||||||||    
T  30259035 agttatacaatgtttgatttgtaaaattgtttcaaagacaggataaactcgaggcaatgggcaagacaaaaac 30258963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 371
Target Start/End: Original strand, 39079222 - 39079269
Alignment:
Q  324 aactttttgtatcacgtacaagttatctaaaatacaaaaatagttttt 371  Q
    ||||||||||| ||| ||||||||||||||| |||||||||| |||||    
T  39079222 aactttttgtaccacatacaagttatctaaattacaaaaataattttt 39079269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 365
Target Start/End: Complemental strand, 52300592 - 52300454
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    ||||||||||||  |||||||||||| | ||  |||||||||  ||| ||| |||| |||||||||  |||||||| ||| |||  | |||||||| |||    
T  52300592 caatgtttgattcataaaactgtttcagagacgggacaaactgcaggtaagggacaggacaaaaactgaaatttttgtccatcaccaaaccacaacgcaa 52300493  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
     |||||||  || ||||||||| ||||||| || ||||||    
T  52300492 ttttttgtccca-gtacaagttgtctaaaacaccaaaata 52300454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 26847480 - 26847350
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaac-t 327  Q
    ||||| ||||||||||||||||  | ||||  ||||| | ||||||||||||| |||||||||  |||||  | ||||| || | | ||||||| ||| |    
T  26847480 tgtttaatttgtaaaactgtttaagtgatataacaaattggaggcaagagacaggacaaaaactgaaattcatgtcccttataaaatcacaacaaaactt 26847381  T
Q  328 ttttgtatcacgtacaagttatctaaaatac 358  Q
    ||||||  ||| |||||||| ||||||||||    
T  26847380 ttttgtcccacatacaagttgtctaaaatac 26847350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 5442357 - 5442288
Alignment:
Q  316 cacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||| |||||||||||||  |||||||||| | |||||||||  |||||||  |||||||| ||||||||    
T  5442357 cacagcacaactttttgtcccacgtacaagctgtctaaaatatcaaaatagcattttatccctcaaaaat 5442288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 203 - 291
Target Start/End: Complemental strand, 10747379 - 10747291
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaac 291  Q
    ||||||||| || || |||| | || |||||||||||||||||| |||  || | |||||||||| ||| ||||||| | |||||||||    
T  10747379 aggacaaaacaatttcagttgttcagtgtttgatttgtaaaactattttaggtacaggacaaactggagacaagagataggacaaaaac 10747291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 28340316 - 28340472
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||| ||||||||||||||  | |||||| |||||||| | |||||| ||||||||    
T  28340316 tgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcatcaaaccacagcacaactt 28340415  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| ||||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  28340416 tttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 28340472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 231 - 366
Target Start/End: Original strand, 41967864 - 41967999
Alignment:
Q  231 tttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttt 330  Q
    ||||||||||||||||||||| || | |||||||||| |||||||||||||||||||||||  | |||||| ||||| |  | |||||||||||||||||    
T  41967864 tttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagagacaagacaaaaactcatatttttgtcccttaccaaaccacaacacaactttt 41967963  T
Q  331 tgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||| ||||||||||||| |||||||||| |||||||    
T  41967964 tgtctcacgtacaagttgtctaaaataccaaaatag 41967999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 366
Target Start/End: Complemental strand, 51264708 - 51264519
Alignment:
Q  182 gtttgatctgctaaaaaataaaggacaa-----aataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaag 276  Q
    ||||||| ||||||||||| ||||||||     |||||||  |||| | || ||||||||||||||||||||||| || | |||||||||| ||||||||    
T  51264708 gtttgatttgctaaaaaatgaaggacaagacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 51264609  T
Q  277 agacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
     ||||||||||||||  | |||||| |||||||  | ||||||||||||||||||||  |||||||||||| | |||||||| |||||||    
T  51264608 ggacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtttaaaatactaaaatag 51264519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 844737 - 844893
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  844737 tgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 844836  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  844837 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 844893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 6711059 - 6711215
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||||||||| ||    
T  6711059 tgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattt 6711158  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  6711159 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 6711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 12890399 - 12890243
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||||||||||| | |||| ||||| |||||||| |||| |||||||||  | |||||| |||||||| | |||||| ||||||||    
T  12890399 tgtttgatttgtaaaactgtttctggtacaggataaactggaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacagcacaactt 12890300  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| ||||| |||| |||||||  |||| ||| ||||||||    
T  12890299 tttgtcccacgtacaagttgtctaagataccaaaatagcattttgtccctcaaaaat 12890243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 16387015 - 16386859
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  16387015 tgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactt 16386916  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  16386915 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 16386859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 35387324 - 35387480
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||| ||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  35387324 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggtaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 35387423  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||||||| ||||||||    
T  35387424 tttgttccacgtacaagttgtctaaaataccaaaatagcattttatccctcaaaaat 35387480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 45490888 - 45491044
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||||||||  | | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  45490888 tgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 45490987  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  45490988 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 45491044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 226 - 385
Target Start/End: Complemental strand, 16451291 - 16451132
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| || ||||  | ||||||||||||    
T  16451291 caatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaa 16451192  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||||||  ||| |||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  16451191 ctttttgtcccacatacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 16451132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 226 - 385
Target Start/End: Complemental strand, 16704890 - 16704731
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||||||||||||||||||||||||| || | | |||||||| |||||||| |||| |||||||||||| |||||| ||||| |  | |||||| |||||    
T  16704890 caatgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacacgacaaaaacatatatttttgtcccttaccaaaccacatcacaa 16704791  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    || ||||| |||| |||||||| |||||||||| ||||||| ||||| |||  |||||||    
T  16704790 ctctttgtctcacatacaagttgtctaaaataccaaaatagctttttgtcctccaaaaat 16704731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 229 - 388
Target Start/End: Original strand, 32289357 - 32289516
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||| | |||||||| ||||||||||||||  | |||||| |||||||  | |||||| ||||||||    
T  32289357 tgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 32289456  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaattat 388  Q
    |||||  |||||||||||| | |||||||| |||||||  |||| ||| |||||||||||    
T  32289457 tttgttccacgtacaagttgtttaaaataccaaaatagcattttgtccctcaaaaattat 32289516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 1351448 - 1351585
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| ||||||||  ||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  1351448 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggaacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 1351547  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||| |||||||    
T  1351548 tttgtcccacgtacaagttgtctaaaataccaaaatag 1351585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 6029314 - 6029450
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| |||| || |||||||  ||||||| |||| |||||||||  |||||||| |||||||  | |||||||||||||||    
T  6029314 tgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggacaggacaaaaactgaaatttttgtccctcaccaaaccacaacacaactt 6029413  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| ||||||| || ||||||    
T  6029414 tttgtcccacgtacaagttgtctaaaacaccaaaata 6029450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 30105693 - 30105849
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| || |||||    
T  30105693 tgtttgatttgtaaaactgtttcaggtaaaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcataactt 30105792  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  30105793 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 30105849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 203 - 367
Target Start/End: Complemental strand, 31004319 - 31004155
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    |||||| || ||||| |||| | || ||||||||||||||||||||||| || | |||||||||| |||||| | |||| |||||||||  |  |||||     
T  31004319 aggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcacgggacaggacaaaaactgatgtttttg 31004220  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagt 367  Q
    |||||||  | ||||||||||||||||||||  |||||||||||| |||||||||| ||||||||    
T  31004219 tccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagt 31004155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 229 - 372
Target Start/End: Original strand, 2761569 - 2761712
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| |||||||||| ||||| || || | || ||||| |||||||| ||||| ||||||||| || ||| ||||||||| || |||||||||||| ||    
T  2761569 tgtttaatttgtaaaattgtttatgcgacatgataaactagaggcaagggacaaaacaaaaacaaaattttatatccctcactaaaccacaacacaattt 2761668  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagtttttt 372  Q
    ||||| ||| |||||| ||||||||||||||||||||| |||||    
T  2761669 tttgtctcaagtacaaattatctaaaatacaaaaatagattttt 2761712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 226 - 385
Target Start/End: Complemental strand, 16437526 - 16437367
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||||||||||||||||||||||||| |  | |||||||||| |||||||  |||| |||||||||  | |||||| |||||||  | ||||||||||||    
T  16437526 caatgtttgatttgtaaaactgtttcagctacaggacaaactagaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaa 16437427  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||||||  |||||||||||| |||||||||  |||||||  |||| ||| ||||||||    
T  16437426 ctttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccttcaaaaat 16437367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 203 - 385
Target Start/End: Complemental strand, 7184105 - 7183923
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    |||||| |||||||| |||| | || |||||||| |||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | ||||||     
T  7184105 aggacagaataactttagttgtccagtgtttgatatgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttg 7184006  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| |  | ||||||||||||||||||||   ||||||||||| |||||||||| || ||||| |||| ||  ||||||||    
T  7184005 tcccttaccaaaccacaacacaactttttgtcctacgtacaagttgtctaaaataccaatatagtattttgtctctcaaaaat 7183923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 165 - 365
Target Start/End: Complemental strand, 41973141 - 41972936
Alignment:
Q  165 ttgttcccttagggtttgtttgatctgctaaaaaataaaggacaaaata-----acttaagttatacaatgtttgatttgtaaaactgtttctgggatag 259  Q
    |||||||| ||||||  ||||||| ||||||||||| |||||||  |||     |||  |||| | || ||||||||||||||||||||||| |  | ||    
T  41973141 ttgttcccatagggtgagtttgatttgctaaaaaatgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacag 41973042  T
Q  260 gacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaataca 359  Q
    |||||||| |||||||| |||| |||||||||  | |||||| |||||||  | ||||||  |||||||||||| ||||||||||||| ||||||||||     
T  41973041 gacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacactacaactttttgtctcacgtacaagttgtctaaaatacc 41972942  T
Q  360 aaaata 365  Q
    ||||||    
T  41972941 aaaata 41972936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 182 - 366
Target Start/End: Original strand, 42512731 - 42512920
Alignment:
Q  182 gtttgatctgctaaaaaataaaggacaa-----aataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaag 276  Q
    ||||||| |||||||||||||||||||      || ||||| |||| | || ||||||||||||||||||||||| || | |||||||||| ||||||||    
T  42512731 gtttgatttgctaaaaaataaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 42512830  T
Q  277 agacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||| |||||||||  | |||||| | |||||  | ||||||||||||||||||||   |||||||| || |||||||||  |||||||    
T  42512831 agacaggacaaaaactgatatttttgtgcctcagcaaaccacaacacaactttttgtcctacgtacaaattgtctaaaatatcaaaatag 42512920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 50540505 - 50540368
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||  || | |||||||||| |||||||| |||| |||| ||||  | |||||| ||| |||| | |||||||||||||||    
T  50540505 tgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagggacaggacataaactcatatttttgtccttcatcaaaccacaacacaactt 50540406  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||| |||||||    
T  50540405 tttgtcccacgtacaagttgtctaaaataccaaaatag 50540368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 17888109 - 17887973
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||| |||| |||||||||  | |||||| ||||||   | |||||||||||||||    
T  17888109 tgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactt 17888010  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  17888009 tttgtcccacgtacaagttgtctaaaataccaaaata 17887973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 32270514 - 32270358
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  32270514 tgtttgatttgtaaaactgtttcaggtagaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 32270415  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  || ||||||||| |||||||||  |||||||  |||| ||| ||||||||    
T  32270414 tttgtcccatgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaaaat 32270358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 203 - 366
Target Start/End: Original strand, 13994062 - 13994225
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    |||||| || ||||| |||| | || |||||||||||||||||||||||  ||| | |||||| | ||||||||  ||  |||||||||  ||||||||     
T  13994062 aggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcatggacatgacaaattggaggcaaggaactggacaaaaactgaaatttttg 13994161  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||||  | |||||||||||||||||||| ||| ||||||||| |||||||||| |||||||    
T  13994162 tccctcaccaaaccacaacacaactttttgtctcatgtacaagttgtctaaaataccaaaatag 13994225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 50304812 - 50304675
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| ||||||||| |||||||||||||  | |||||| ||||||   | |||||| ||||||||    
T  50304812 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacaagacaaaaactgatatttttgtccctctgcaaaccacagcacaactt 50304713  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||| ||||||  ||||| |||||||||  |||||||    
T  50304712 tttgtctcacgtttaagttgtctaaaatatcaaaatag 50304675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 26118228 - 26118384
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||  |||| |||||||||  | |||||| |||||||  | | |||| ||||||||    
T  26118228 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactt 26118327  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||| ||||| |||||||||| |||||||  |||| ||| ||||||||    
T  26118328 tttgtcccacgtaaaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 26118384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 42510686 - 42510530
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||| ||||||||||||| || | |||||||||| ||| |||| |||| |||||||||  | |||||| || ||||  | |||||| ||||||||    
T  42510686 tgtttgattcgtaaaactgtttcaggtacaggacaaactggagacaagggacaggacaaaaactcatatttttgtctctcaccaaaccacagcacaactt 42510587  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  42510586 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 42510530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 16476168 - 16476305
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| || ||||| |||| || ||||||  | |||||| |||||||  | |||||  ||||||||    
T  16476168 tgtttgatttgtaaaactgtttcaggtacaggacaaactagatgcaagggacaggataaaaactcatatttttgtccctcaccaaaccacggcacaactt 16476267  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||| |||||||    
T  16476268 tttgtcccacgtacaagttgtctaaaataccaaaatag 16476305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 17327662 - 17327798
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| ||||||||||||||||| || | |||||||||| ||| |||| |||| |||||||||  | |||||| |||||||  | | |||| ||||||||    
T  17327662 tgtttaatttgtaaaactgtttcaggtacaggacaaactggagtcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactt 17327761  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||| ||| |||||| ||||||||||||| ||||||    
T  17327762 tttgtctcatgtacaaattatctaaaataccaaaata 17327798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 205 - 365
Target Start/End: Complemental strand, 39282079 - 39281919
Alignment:
Q  205 gacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatc 304  Q
    ||||| ||||||| |||| | || ||||||||||||||||||||||  || | |||||||||| || ||||| |||| |||||||||  | |||||| ||    
T  39282079 gacaagataacttcagttgttcagtgtttgatttgtaaaactgtttaaggtacaggacaaactagatgcaagggacaggacaaaaactcatatttttgtc 39281980  T
Q  305 cctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  | ||||||  ||||||||||||   ||||||||||| |||||||||| ||||||    
T  39281979 cctcaccaaaccacagtacaactttttgtcctacgtacaagttgtctaaaataccaaaata 39281919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 6143996 - 6144135
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||||||||||||||||||| ||||| | || | |||||||| |||||||| |||| |||||||||   ||||||| ||||||   | ||||||||||||    
T  6143996 caatgtttgatttgtaaaacagtttcagagacatgacaaactggaggcaagggacaggacaaaaactgcaatttttgtccctcggcaaaccacaacacaa 6144095  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||| |  |||||| ||||| ||||||| |||||||||    
T  6144096 ctttttctcccacgtagaagttgtctaaaacacaaaaata 6144135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 213 - 372
Target Start/End: Complemental strand, 26733732 - 26733573
Alignment:
Q  213 aacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcatta 312  Q
    ||||| |||| ||| ||||||||||||||||||||||| | |||  ||||||||| ||| | |  |||| |||||||||  ||||| || |||| || ||    
T  26733732 aacttcagttgtacgatgtttgatttgtaaaactgtttttaggaccggacaaactagagacgatggacatgacaaaaactgaaattcttgtcccccacta 26733633  T
Q  313 taccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagtttttt 372  Q
     |||| ||||||||||||||  ||| ||||||||| |||||||||| |||||||| ||||    
T  26733632 aaccataacacaactttttgcctcatgtacaagttgtctaaaataccaaaatagtctttt 26733573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 24339651 - 24339789
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctca-ttataccacaacacaact 327  Q
    ||||||||||||| ||||||||| || | | |||||||| |||||||| |||| |||||||||  | |||||| |||||||   | ||||||||||||||    
T  24339651 tgtttgatttgtataactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaaccacaacacaact 24339750  T
Q  328 ttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||| |  |||||||||||| |||||||||| |||||||    
T  24339751 ttttttcccacgtacaagttgtctaaaataccaaaatag 24339789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 1601332 - 1601178
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||| ||||| || | |||||||||| |||||||| || |  ||||||||    |||||| |||||||  | |||||||||||||||    
T  1601332 tgtttgatttgtaaaacggtttcaggtacaggacaaactggaggcaagggatagaacaaaaac--tcatttttgtccctcaccaaaccacaacacaactt 1601235  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  ||| |||||||| |||||||||| |||||||  |||| |||| |||||||    
T  1601234 tttgtcccacatacaagttgtctaaaataccaaaatagcattttgtccaccaaaaat 1601178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 269 - 385
Target Start/End: Complemental strand, 46447785 - 46447669
Alignment:
Q  269 gaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagtt 368  Q
    |||||||| |||  |||||||||  |||||||||| |||| ||| |  ||| |||||||||||||  ||||||||||||||||||||||  ||||||||     
T  46447785 gaggcaagggacctgacaaaaactaaaatttttattcctccttaaattacatcacaactttttgttccacgtacaagttatctaaaatatcaaaatagtc 46447686  T
Q  369 ttttatccatcaaaaat 385  Q
    |||| ||||||||||||    
T  46447685 ttttgtccatcaaaaat 46447669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 211 - 385
Target Start/End: Original strand, 504386 - 504560
Alignment:
Q  211 ataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcat 310  Q
    ||||||| |||| ||||  |||||||||| |||| |||||  |||| | ||||||||||||||||| ||||| ||||||||  ||| |||| || ||||     
T  504386 ataacttcagttgtacagcgtttgatttgcaaaattgttttagggacaagacaaacttgaggcaagggacaacacaaaaactgaaaattttgtctctcac 504485  T
Q  311 tataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    || |||| ||||||| |||||||  ||| || ||||| |||||||||| ||| ||| ||||| | || |||||||    
T  504486 taaaccataacacaattttttgtcccacatagaagttgtctaaaataccaaagtagctttttgttcaccaaaaat 504560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 181 - 331
Target Start/End: Original strand, 3560115 - 3560265
Alignment:
Q  181 tgtttgatctgctaaaaaataaaggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagac 280  Q
    |||||||| ||||||  ||| |||||||  | ||||||||||||| ||||||||||||||||| |||| |  | |||||||||||||  | ||||  |||    
T  3560115 tgtttgatttgctaagcaatgaaggacatgacaacttaagttatataatgtttgatttgtaaatctgtcttagagataggacaaactgaaagcaatggac 3560214  T
Q  281 aagacaaaaacataaatttttatccctcattataccacaacacaacttttt 331  Q
    || |||||||  |||| |||| ||||| | || ||||||||||||||||||    
T  3560215 aaaacaaaaatttaaagttttgtcccttactaaaccacaacacaacttttt 3560265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 231 - 357
Target Start/End: Complemental strand, 17291737 - 17291612
Alignment:
Q  231 tttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttt 330  Q
    |||||||||||||||||||| | ||| |||| ||  |  || ||||||||| ||||||||||||||||||| |||| || || ||||||||| |||||||    
T  17291737 tttgatttgtaaaactgtttttaggacaggataagttgaagtcaagagacaggacaaaaacataaatttttgtccc-cactaaaccacaacaaaactttt 17291639  T
Q  331 tgtatcacgtacaagttatctaaaata 357  Q
    |||  | |||||||||||| |||||||    
T  17291638 tgtccctcgtacaagttatataaaata 17291612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 229 - 371
Target Start/End: Original strand, 44738055 - 44738197
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| ||||||||||||||||| || | | |||||  | |||||||| |||| ||| |||||  | |||||| |||||||  | |||||| ||||||||    
T  44738055 tgtttaatttgtaaaactgtttcaggtacatgacaacttggaggcaagggacaggaccaaaactcatatttttgtccctcaccaaaccacatcacaactt 44738154  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttt 371  Q
    |||||  |||||||||||| |||||||||  ||||||||||||    
T  44738155 tttgtcccacgtacaagttgtctaaaatagcaaaatagttttt 44738197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 50382413 - 50382552
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgagg---caagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||||||||| |||||||||||| |||| |  ||||||| ||||   |||  |||| |||||||||  |||||||| ||| |||  | ||||||||||||    
T  50382413 tgtttgatttttaaaactgtttcagggacataacaaactggaggaggcaatggacaggacaaaaactgaaatttttgtccttcaccaaaccacaacacaa 50382512  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||||||  |||||||||||| ||||||| |||||||||    
T  50382513 ctttttgtcccacgtacaagttgtctaaaacacaaaaata 50382552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 26764808 - 26764944
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||| || |||||  || | | || ||||| |||||||  |||| ||||||||| || |||||| |||||||    |||||||||||||||    
T  26764808 tgtttgatttgtacaattgttttaggtacaagataaactggaggcaaaggacaggacaaaaacttatatttttgtccctcaccgaaccacaacacaactt 26764907  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  26764908 tttgtcccacgtacaagttgtctaaaataccaaaata 26764944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 49303367 - 49303503
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || ||| |||||||| ||| |||| ||||||| ||||||  | |||||| ||| |||  | |||||| ||||| ||    
T  49303367 tgtttgatttgtaaaactgtttcaggtataagacaaactggagacaagggacaagagaaaaactcatatttttgtccttcaccaaaccacagcacaattt 49303466  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||| |   ||||||||||| |||||||||| ||||||    
T  49303467 tttatcctacgtacaagttgtctaaaatactaaaata 49303503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 224 - 301
Target Start/End: Complemental strand, 4895527 - 4895450
Alignment:
Q  224 tacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttt 301  Q
    ||||||||||||||||||||||||||| | |||   |||||||   |||||||||||||||||||||||||| |||||    
T  4895527 tacaatgtttgatttgtaaaactgtttttaggacgagacaaacggaaggcaagagacaagacaaaaacataatttttt 4895450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 362
Target Start/End: Complemental strand, 5109889 - 5109756
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||| | |||||||| |||| |||||||||  |  ||||| |||||||  | |||||| ||||||||    
T  5109889 tgtttgatttgtaaaactgtttcaggtacaagacaaattggaggcaagggacaggacaaaaactcatgtttttgtccctcaccaaaccacatcacaactt 5109790  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaa 362  Q
    |||||   | ||||||||| |||||||| |||||    
T  5109789 tttgtccaaagtacaagttgtctaaaatgcaaaa 5109756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 233 - 366
Target Start/End: Complemental strand, 45658978 - 45658845
Alignment:
Q  233 tgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttg 332  Q
    |||||||||||||||||||  | | |||||||||| ||| |||  ||||||||||||||  | |||||| || ||||  | |||||||||||||||||||    
T  45658978 tgatttgtaaaactgtttcaagtacaggacaaactggagacaaaggacaagacaaaaactgatatttttgtcgctcaccaaaccacaacacaactttttg 45658879  T
Q  333 tatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |  ||| |||||||| | | |||||| |||||||    
T  45658878 tcccacctacaagttgttttaaataccaaaatag 45658845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 15539903 - 15540039
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||||||||  ||| || ||||||| ||||||||||||| ||||||| |  ||| |||| ||  |||  | |||||| ||||||||    
T  15539903 tgtttgatttgtaaaactgtttcaaggacagaacaaactggaggcaagagacaggacaaaacctgaaacttttgtctttcaccaaaccacagcacaactt 15540002  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||   ||||| ||||| ||||||| || ||||||    
T  15540003 tttgtcatacgtagaagttgtctaaaacaccaaaata 15540039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 229 - 372
Target Start/End: Complemental strand, 7837294 - 7837151
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||| |||| ||||||||   || ||||| ||| | |  | | |||| ||||||||    
T  7837294 tgtttgatttgtaaaactgtttcaggaacatgacaaactagaggcaagggacatgacaaaaattgaattttttgtccattaccaaatcacatcacaactt 7837195  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagtttttt 372  Q
    ||||| ||||  ||||||| |||||||||  |||||||| ||||    
T  7837194 tttgtctcacagacaagttgtctaaaatatcaaaatagtatttt 7837151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 229 - 372
Target Start/End: Original strand, 47242529 - 47242671
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| |||||||||| ||||| ||||| | |||||||| |||| | | |||||||||||||| ||||||||| || ||||||| | |  |  |||||||    
T  47242529 tgtttaatttgtaaaattgtttatgggacatgacaaactggaggtaggtgacaagacaaaaac-taaatttttttctctcattaaaacctagtacaactt 47242627  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagtttttt 372  Q
    ||||| ||||||   |||| |||||||||| |||||||| ||||    
T  47242628 tttgtctcacgtgttagttgtctaaaataccaaaatagtctttt 47242671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 355
Target Start/End: Complemental strand, 10384528 - 10384402
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| | |||| || | || ||||| | || ||||  ||||||||||||||  | |||||| ||| ||| || |||||| ||||||||    
T  10384528 tgtttgatttgtaaaattatttcaggtacagtacaaattggatgcaaaggacaagacaaaaactcatatttttgtccttcactaaaccacagcacaactt 10384429  T
Q  329 tttgtatcacgtacaagttatctaaaa 355  Q
    |||||  ||||||||| ||||||||||    
T  10384428 tttgtcccacgtacaaattatctaaaa 10384402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 11772645 - 11772783
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | | ||| || |||||||  ||||||||||||||  | |||||| |||||||  | |||||| ||||||||    
T  11772645 tgtttgatttgtaaaactgtttcaggtacaaggcaatctggaggcaaaggacaagacaaaaactgatatttttgtccctcaccaaaccacagcacaactt 11772744  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagt 367  Q
    |||||  ||| ||||| || | | |||||| ||||||||    
T  11772745 tttgtcccacctacaaattgttttaaataccaaaatagt 11772783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 40856237 - 40856172
Alignment:
Q  300 ttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||| ||| ||| |||||||||||||||||||| |||| || || ||||||||||||||||||||    
T  40856237 ttatctctctttaaaccacaacacaactttttgtctcacatataaattatctaaaatacaaaaata 40856172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 51703177 - 51703312
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| ||||||  | | |||| |||||  ||||||| ||||  ||||||||  | |||||| | |||||  | |||||||||||||||    
T  51703177 tgtttgatttgtaaaattgtttcaagtacaggataaactgaaggcaagggacagaacaaaaactcatatttttgttcctcacca-accacaacacaactt 51703275  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  ||| |||| ||| |||||||||||||||||    
T  51703276 tttgtcccacctacatgttgtctaaaatacaaaaata 51703312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 229 - 384
Target Start/End: Complemental strand, 6771529 - 6771374
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||| |||||||||||  |||| | || ||| | ||| |||| ||||||||||||||  ||||| || || |||| || | |||||||||||||    
T  6771529 tgtttgatttataaaactgttttagggacatgataaattagagacaagggacaagacaaaaactaaaattcttgtcactcactaaatcacaacacaactt 6771430  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaa 384  Q
    ||| |  ||| ||||||||  ||||||||  |||||| | |||| ||||| |||||    
T  6771429 tttctcccacatacaagttgactaaaatatcaaaataatattttgtccataaaaaa 6771374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 301
Target Start/End: Complemental strand, 7146983 - 7146849
Alignment:
Q  172 cttagggtttgtttgatctgctaaaaaataaaggacaa-----aataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaac 266  Q
    |||||||| ||||||||| |||||||| ||||||| ||     || ||||| |||| || | |||||||||||||||| ||||| ||||| || | ||||    
T  7146983 cttagggtgtgtttgatcagctaaaaattaaaggataagacataacaacttcagttgtatagtgtttgatttgtaaaattgtttttgggacagaataaac 7146884  T
Q  267 ttgaggcaagagacaagacaaaaacataaattttt 301  Q
    | ||| |||  ||||| ||||||||| ||||||||    
T  7146883 tagagacaaaggacaaaacaaaaacagaaattttt 7146849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 8839061 - 8838996
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaac 291  Q
    ||||||||||||||||||||||||||||| | | |||||||| |||| ||  |||| |||||||||    
T  8839061 caatgtttgatttgtaaaactgtttctggtacaagacaaactggaggaaatggacatgacaaaaac 8838996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 230 - 386
Target Start/End: Complemental strand, 570549 - 570390
Alignment:
Q  230 gtttgatttgtaaaactgtttctgggataggacaaacttgaggcaa-gagacaagacaaaaacataaatttttatccctcattataccacaa--cacaac 326  Q
    ||||||||| ||||| |||||| | || | || ||||| ||||||| | |||| || ||||||| |||||||| |||||||  | |||||||  ||||||    
T  570549 gtttgatttataaaattgtttcagcgacaagataaactggaggcaaagggacatgataaaaacagaaatttttgtccctcaccaaaccacaatgcacaac 570450  T
Q  327 tttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaatt 386  Q
    ||||||| || |||| ||||| |||||||||  ||||||   |||| |||| ||||||||    
T  570449 tttttgtctcgcgtataagttgtctaaaatatcaaaataacattttttccaccaaaaatt 570390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 278 - 366
Target Start/End: Complemental strand, 25539967 - 25539879
Alignment:
Q  278 gacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||||||||||||  | |||||| |||||||  | ||||||||||||||||||||  ||| |||||||| | | |||||| |||||||    
T  25539967 gacaagacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaataccaaaatag 25539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 341 - 377
Target Start/End: Original strand, 52030330 - 52030366
Alignment:
Q  341 acaagttatctaaaatacaaaaatagttttttatcca 377  Q
    |||||||||||||||||||||||||||||||| ||||    
T  52030330 acaagttatctaaaatacaaaaatagttttttgtcca 52030366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 384 - 418
Target Start/End: Complemental strand, 6771356 - 6771322
Alignment:
Q  384 attattcaataccataaaagtaagtttgtcgtgtg 418  Q
    |||||||||||||||||||||||||||||| ||||    
T  6771356 attattcaataccataaaagtaagtttgtcatgtg 6771322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 316 - 366
Target Start/End: Complemental strand, 33316491 - 33316441
Alignment:
Q  316 cacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||||||||||||| |  |||||||||||| |||||| |||||||||||    
T  33316491 cacaacacaactttttcttacacgtacaagttgtctaaattacaaaaatag 33316441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 314 - 385
Target Start/End: Original strand, 34283914 - 34283987
Alignment:
Q  314 accacaacacaactttttgtatcacgtacaagt--tatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||||||||||||||| | ||||||||||||  ||| |||||||  |||||||| |||| ||||| ||||||    
T  34283914 accacaacacaactttttatctcacgtacaagttatatataaaatatcaaaatagtcttttgtccataaaaaat 34283987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 462
Target Start/End: Original strand, 2761795 - 2761832
Alignment:
Q  425 tgtccggtacatgttgtttagcaaatcaaacacacctt 462  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  2761795 tgtccggtacatactgtttagcaaatcaaacacacctt 2761832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 357
Target Start/End: Complemental strand, 38663226 - 38663165
Alignment:
Q  296 atttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaata 357  Q
    |||||| |||||||  | |||||| |||||||||||||  |||||||||||| |||||||||    
T  38663226 atttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaata 38663165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 51374424 - 51374469
Alignment:
Q  327 tttttgtatcacgtacaagttatctaaaatacaaaaatagtttttt 372  Q
    ||||||||||| || |||||| ||||||||| ||||||||||||||    
T  51374424 tttttgtatcatgttcaagttgtctaaaatataaaaatagtttttt 51374469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 210 - 290
Target Start/End: Complemental strand, 7837554 - 7837474
Alignment:
Q  210 aataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaa 290  Q
    |||||||| |||| | || |||||||||| |||||||||||| || | | |||||||| |||||| | |||| ||||||||    
T  7837554 aataacttcagttgttcagtgtttgatttataaaactgtttcaggaacatgacaaactagaggcaggggacatgacaaaaa 7837474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 203 - 355
Target Start/End: Original strand, 38086983 - 38087135
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    ||||||||| ||||| |||| | |  |||||||||| |||||| |||||  | | |||| ||| | || ||||  |||| |||||||||  | ||||||     
T  38086983 aggacaaaacaacttcagttgtcctgtgtttgatttataaaacagtttcaagtacaggataaaatggatgcaatggacatgacaaaaactcatatttttg 38087082  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaa 355  Q
    ||| ||| || |||||| |||||||||||||  || ||||||||| |||||||    
T  38087083 tccttcactaaaccacatcacaactttttgtcccaagtacaagttgtctaaaa 38087135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 227 - 377
Target Start/End: Complemental strand, 17031311 - 17031161
Alignment:
Q  227 aatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaac 326  Q
    ||||||||||||||||||||||||| |||| || ||||| | |||||||  |||| |||||||||||||||||||  ||||||||| | |||| ||||||    
T  17031311 aatgtttgatttgtaaaactgtttcagggacagtacaaattggaggcaaaggacaggacaaaaacataaatttttgcccctcattaaatcacagcacaac 17031212  T
Q  327 tttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatcca 377  Q
    |||| ||  |||||||||||||| |||||||||||||||| ||||| ||||    
T  17031211 ttttcgtcccacgtacaagttatttaaaatacaaaaatagctttttgtcca 17031161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 35701429 - 35701273
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||||||||||| | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | ||||||||| |||||    
T  35701429 tgtttgatttgtaaaactgtttctggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacataactt 35701330  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  35701329 tttgttccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 35701273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 175 - 365
Target Start/End: Original strand, 4689583 - 4689778
Alignment:
Q  175 agggtttgtttgatctgctaaaaaataaaggacaa-----aataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttg 269  Q
    |||||| ||||||| ||||||||||| |||||||      || ||||| |||| | || ||||||||||||||||||||||| || | | |||||||| |    
T  4689583 agggttcgtttgatttgctaaaaaatgaaggacatgacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactgg 4689682  T
Q  270 aggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||||| |||| |||||||||| | |||||| |||||||  | ||||||||||||||||||||  ||||||||||||  ||||||||||||||||    
T  4689683 aggcaagggacaggacaaaaacacatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgcctaaaatacaaaaata 4689778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 229 - 386
Target Start/End: Original strand, 21739105 - 21739262
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  21739105 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 21739204  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaatt 386  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| |||||||||    
T  21739205 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatt 21739262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 7523324 - 7523168
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  7523324 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactt 7523225  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  7523224 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 7523168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 32528867 - 32528711
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| ||| |||| |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  32528867 tgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 32528768  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  32528767 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 32528711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 260 - 367
Target Start/End: Complemental strand, 24206492 - 24206385
Alignment:
Q  260 gacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaataca 359  Q
    |||||||| ||||||||||||||||||||| |||||||| || | |||||||| ||||||||| |||||||||| || |||||||||||||||||||||     
T  24206492 gacaaactagaggcaagagacaagacaaaaccataaattcttcttcctcattaaaccacaacataactttttgtttctcgtacaagttatctaaaatact 24206393  T
Q  360 aaaatagt 367  Q
    ||||||||    
T  24206392 aaaatagt 24206385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 228 - 366
Target Start/End: Original strand, 22432252 - 22432390
Alignment:
Q  228 atgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaact 327  Q
    |||||||||||||||||||||||| ||   |||| ||||| ||||||||||||| |||||||||  | |||||| |||||||| | |||||||||||| |    
T  22432252 atgtttgatttgtaaaactgtttcaggttcaggataaactggaggcaagagacaggacaaaaactgatatttttgtccctcatcaaaccacaacacaatt 22432351  T
Q  328 ttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||| ||| ||||||||| |||||||||| |||||||    
T  22432352 ttttgtctcaagtacaagttgtctaaaataccaaaatag 22432390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 553549 - 553413
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||| ||||||||||||  | | |||||||||| |||||||||||||||||||||||  | |||||| || ||||  | |||||||||||||||    
T  553549 tgtttgatttataaaactgtttcaagtacaggacaaactggaggcaagagacaagacaaaaactcatatttttgtctctcaccaaaccacaacacaactt 553450  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  553449 tttgtcccacgtacaagttgtctaaaataccaaaata 553413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 2351832 - 2351696
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||  || |||||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  2351832 tgtttgatttgtaaaactgtttaaggtataggacaaactggaggcaagtgacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 2351733  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  2351732 tttgtcccacgtacaagttgtctaaaataccaaaata 2351696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 11963493 - 11963337
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  11963493 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 11963394  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  ||||| |||||| |||||||||| |||||||  |||| ||| ||||||||    
T  11963393 tttgtcccacgtgcaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 11963337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 31770535 - 31770691
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||||||||  | | | |||||||| |||||||| |||| |||||||||  | ||||||||||||||  | |||||||||||||||    
T  31770535 tgtttgatttgtaaaactgtttcatgtacaagacaaactggaggcaagggacaggacaaaaactcatatttttatccctcaccaaaccacaacacaactt 31770634  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| ||| |||||| |||||||  |||| ||| ||||||||    
T  31770635 tttgtcccacgtacaagttgtctgaaataccaaaatagcattttgtccctcaaaaat 31770691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 182 - 385
Target Start/End: Original strand, 6284192 - 6284399
Alignment:
Q  182 gtttgatctgctaaaaaataaaggac---aaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagag 278  Q
    ||||||| || |||||||| ||||||   | |||||||| |||| | || ||||||||||||||||||| ||| || | |||||||||| |||||| | |    
T  6284192 gtttgatttgttaaaaaatgaaggacgggagaataactttagttgtccagtgtttgatttgtaaaactgcttcaggtacaggacaaactggaggcatggg 6284291  T
Q  279 acaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaata-caaaaatagttttttatcca 377  Q
    ||| ||||||||| ||  ||||| |||||||  | ||||||||||||||||||||  |||||||||||| || |||||| |||||||||  |||| |||     
T  6284292 acaggacaaaaacttatttttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtccaaaataccaaaaatagcattttgtccc 6284391  T
Q  378 tcaaaaat 385  Q
    ||||||||    
T  6284392 tcaaaaat 6284399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 31644597 - 31644461
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||||| ||||||||| ||  | |||||| |||||||  | |||||| ||||||||    
T  31644597 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagag-caagacaaatactcatatttttgtccctcaccaaaccacagcacaactt 31644499  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||| |||||||    
T  31644498 tttgtcccacgtacaagttgtctaaaataccaaaatag 31644461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 230 - 366
Target Start/End: Original strand, 4818085 - 4818221
Alignment:
Q  230 gtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaacttt 329  Q
    |||||||||||||||||||||| || | | |||||||| ||||||||  |||||||||||||  | |||||| |||||||  | |||||| |||||||||    
T  4818085 gtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaaggaacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaacttt 4818184  T
Q  330 ttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||  |||||||||||| |||||||||| |||||||    
T  4818185 ttgtcccacgtacaagttgtctaaaataccaaaatag 4818221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 7770223 - 7770359
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| |||||| || | |||||||||| |||||||| |||| |||||||||| | |||||| ||| |||  | |||||| ||||||||    
T  7770223 tgtttgatttgtaaaattgtttcaggtacaggacaaactggaggcaagggacaggacaaaaacacatatttttgtccttcaccaaaccacagcacaactt 7770322  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  ||||||||||||  ||||||||||||||||    
T  7770323 tttgtcccacgtacaagttgcctaaaatacaaaaata 7770359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 8136989 - 8136853
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||| |||||||||||||||| |  | |||||||||| ||||||||||||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  8136989 tgtttgttttgtaaaactgtttcagatacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 8136890  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||   ||||||||||| |||||||||| ||||||    
T  8136889 tttgtcctacgtacaagttgtctaaaataccaaaata 8136853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 23091248 - 23091376
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||| ||||| |||||||| ||||||||||||||  | |||||| ||| |||| | |||||||||||||||    
T  23091248 tgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagggacaagacaaaaactcatatttttgtccgtcatcaaaccacaacacaactt 23091347  T
Q  329 tttgtatcacgtacaagttatctaaaata 357  Q
    ||||| ||||||| || || |||||||||    
T  23091348 tttgtctcacgtataaattgtctaaaata 23091376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 28090464 - 28090600
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | | |||||| |||||||| |||| |||||||||  | |||||| |||||||  | || ||||||||||||    
T  28090464 tgtttgatttgtaaaactgtttcaggtacaaggcaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaactacaacacaactt 28090563  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||||||||||    
T  28090564 tttgtcccacgtacaagttgtctaaaatacaaaaata 28090600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 226 - 366
Target Start/End: Complemental strand, 34795042 - 34794902
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||| ||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| |||||    
T  34795042 caatatttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaa 34794943  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||||||  |||||| ||||| |||||||||| |||||||    
T  34794942 ctttttgtcccacgtataagttgtctaaaataccaaaatag 34794902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 39918659 - 39918523
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| |  | | |||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  39918659 tgtttgatttgtaaaactgtttcagatacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 39918560  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||| ||||||||||||| |||||||||| ||||||    
T  39918559 tttgtctcacgtacaagttgtctaaaataccaaaata 39918523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 219 - 365
Target Start/End: Original strand, 18470362 - 18470508
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccac 318  Q
    |||||| || ||||||||||||||||||||||| |||| || |||||||  ||||||| ||||||||||||||  |||||||| ||||| |  | |||||    
T  18470362 agttatccagtgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggacaagacaaaaactgaaatttttgtcccttaccaaaccac 18470461  T
Q  319 aacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    | ||||||||||| |  |||||||||||| ||||||| || ||||||    
T  18470462 agcacaactttttatcccacgtacaagttgtctaaaacaccaaaata 18470508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 7208174 - 7208311
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || |  ||||||||| || ||||||||||  || |||||  | |||||| |||||||  | |||||| ||||||||    
T  7208174 tgtttgatttgtaaaactgtttcaggtacgggacaaactggatgcaagagacagaaccaaaactcatatttttgtccctcaccaaaccacagcacaactt 7208273  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||| ||||||||||||| |||||||||| |||||||    
T  7208274 tttgtctcacgtacaagttgtctaaaataccaaaatag 7208311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 205 - 365
Target Start/End: Original strand, 700521 - 700681
Alignment:
Q  205 gacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatc 304  Q
    ||||||| ||||  |||| | ||||| |||||||||||||||||||| || | | |||||||  ||| |||| ||||| |||||||   | |||||| |     
T  700521 gacaaaacaactctagttgttcaatgattgatttgtaaaactgtttcaggtacaagacaaacaagagacaagggacaaaacaaaaattcatatttttgtt 700620  T
Q  305 cctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  | |||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  700621 cctcaccaaaccacaacacaactttttgtctcacgtacaagttatctaaaataccaaaata 700681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 41790407 - 41790542
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| |  | |||||||||| ||||||| | ||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  41790407 tgtttgatttgtaaaactgtttcagt-acaggacaaactggaggcaataaacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 41790505  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||| |||||||||| || |||||||||| ||||||    
T  41790506 tttgtctcacgtacaaattgtctaaaatactaaaata 41790542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 231 - 365
Target Start/End: Complemental strand, 39788343 - 39788209
Alignment:
Q  231 tttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttt 330  Q
    ||||||||||||||||||||| || | ||||||||||  ||||||  |||| |||||||||  | |||||| |||||||  | |||||| ||||||||||    
T  39788343 tttgatttgtaaaactgtttcaggtacaggacaaactgtaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttt 39788244  T
Q  331 tgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||  |||||||||||| |||||||||| ||||||    
T  39788243 tgtcccacgtacaagttgtctaaaatactaaaata 39788209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 24181568 - 24181705
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| ||| |||| |||| |||||||||  | |||||| |||||||  | |||||| || |||||    
T  24181568 tgtttgatttgtaaaactgtttcaggtacaggacaaactggagccaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcataactt 24181667  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||| ||||| |||||||||| |||||||    
T  24181668 tttgtcccacgtataagttgtctaaaataccaaaatag 24181705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 31880020 - 31880157
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||| ||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| |||||||     
T  31880020 tgtttgattagtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaacta 31880119  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||   ||||||||||| |||||||||| |||||||    
T  31880120 tttgtcctacgtacaagttgtctaaaataccaaaatag 31880157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 213 - 357
Target Start/End: Complemental strand, 5598648 - 5598504
Alignment:
Q  213 aacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcatta 312  Q
    |||| ||||| | |||||||||||||||||||||||||| || |   |||||||| |||||||| || | |||||||||| | |||||| ||| |||| |    
T  5598648 aactcaagttgtccaatgtttgatttgtaaaactgtttcaggtacgagacaaactggaggcaagggagaggacaaaaacagatatttttgtccttcatca 5598549  T
Q  313 taccacaacacaactttttgtatcacgtacaagttatctaaaata 357  Q
     || ||| ||||||||||||| |||||||||| || |||||||||    
T  5598548 aacaacagcacaactttttgtctcacgtacaacttgtctaaaata 5598504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 36174993 - 36175108
Alignment:
Q  194 aaaaaataaaggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacat 293  Q
    |||||||||||||||| ||||||| |||| |||  |||||||||||||||||||||||| |||||| | ||| | |||| ||| ||||||||||||||      
T  36174993 aaaaaataaaggacaagataacttcagttgtacggtgtttgatttgtaaaactgtttctaggatagtaaaaattagaggtaagggacaagacaaaaactg 36175092  T
Q  294 aaatttttatccctca 309  Q
    ||||| || |||||||    
T  36175093 aaattattgtccctca 36175108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 182 - 386
Target Start/End: Complemental strand, 40489540 - 40489332
Alignment:
Q  182 gtttgatctgctaaaaaataa----aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaaga 277  Q
    ||||||| |||||||||||||    |||||| |||||||  | || | || ||||||||||||||||||||||| || | | |||||||| ||||||||     
T  40489540 gtttgatttgctaaaaaataaggacaggacagaataactctaattgttcagtgtttgatttgtaaaactgtttcaggtagaagacaaactggaggcaagg 40489441  T
Q  278 gacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatcca 377  Q
    |||  |||||||||  | |||||| |||||||  | | |||| |||||||||||||  ||| |||||||| |||||||||| ||||||   |||| |||     
T  40489440 gacgggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacatacaagttgtctaaaataccaaaataacattttgtccc 40489341  T
Q  378 tcaaaaatt 386  Q
    |||||||||    
T  40489340 tcaaaaatt 40489332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 231 - 357
Target Start/End: Complemental strand, 41459738 - 41459613
Alignment:
Q  231 tttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttt 330  Q
    ||||||||||||||||||||| || | |||||||||| |||||||| ||||||| ||||||  | |||||| |||||||  | |||| | ||||||||||    
T  41459738 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaaga-aaaaactcatatttttgtccctcaccaaaccagagcacaactttt 41459640  T
Q  331 tgtatcacgtacaagttatctaaaata 357  Q
    |||  |||||||||||| |||||||||    
T  41459639 tgttccacgtacaagttgtctaaaata 41459613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 22493363 - 22493500
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| ||||||||||||||||| || | |||| ||||| ||| |||  ||||||||||||||  | |||||| |||||||  | |||||| ||||||||    
T  22493363 tgtttaatttgtaaaactgtttcaggtacaggataaactggagccaaaggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 22493462  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||  |||||||    
T  22493463 tttgtcacacgtacaagttgtctaaaatatcaaaatag 22493500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 27839018 - 27839154
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | ||||||||  ||||||  |||| || |||| ||||||||||| |||||||  | |||| || |||||||    
T  27839018 tgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaatggacaggataaaa-cataaatttttgtccctcaccaaaccataaaacaactt 27839116  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||| ||| ||||||||| |||||||||| |||||||    
T  27839117 tttgtctcatgtacaagttgtctaaaataccaaaatag 27839154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 213 - 365
Target Start/End: Original strand, 8560910 - 8561062
Alignment:
Q  213 aacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcatta 312  Q
    ||||| |||||| || ||||||||||||||||||||||| |  | ||||||||||  | ||||  ||||||||||||||  | |||||| | |||||  |    
T  8560910 aacttcagttattcagtgtttgatttgtaaaactgtttcagatacaggacaaactgaaagcaaaggacaagacaaaaactgatatttttgttcctcacca 8561009  T
Q  313 taccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
     |||||| |||||||||||||  || ||||||||| |||||||||| ||||||    
T  8561010 aaccacatcacaactttttgttccaggtacaagttgtctaaaataccaaaata 8561062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 7725727 - 7725878
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    ||||||||| ||||| |||| | || ||||||||| |||||| |||||| ||   || ||||||| || ||||| |||| |||||||||  | ||||||     
T  7725727 aggacaaaacaacttcagttgtccagtgtttgattagtaaaattgtttcaggtgcagaacaaactggatgcaagggacatgacaaaaactcatatttttg 7725826  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaa 354  Q
    ||| |||||| ||||||||||||||||||||  |||||| ||||| ||||||    
T  7725827 tccttcattaaaccacaacacaactttttgtcccacgtataagttgtctaaa 7725878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 203 - 365
Target Start/End: Complemental strand, 24036408 - 24036246
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    ||||||||| || | ||||| | || ||||||||||| ||||||||||| || | || ||||| | |||||||| |||| ||||||| |  | ||||||     
T  24036408 aggacaaaacaattcaagttgtccagtgtttgatttggaaaactgtttcaggtacagcacaaattggaggcaagggacaggacaaaatctcatatttttg 24036309  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||||  | |||||| ||||||||||| |  |||||||||||| |||||||||| ||||||    
T  24036308 tccctcaccaaaccacatcacaactttttatcccacgtacaagttgtctaaaataccaaaata 24036246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 32092926 - 32093062
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| |||||| || | |||||||| | |||||||  || | |||||||||  |||||||| ||| |||  | |||||| ||||||||    
T  32092926 tgtttgatttgtaaaattgtttcaggaacaggacaaattggaggcaaaggataggacaaaaactgaaatttttgtcc-tcaccaaaccacagcacaactt 32093024  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  ||||||||| ||||||||||||| |||||||    
T  32093025 tttgtcccacgtacaaattatctaaaataccaaaatag 32093062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 3735509 - 3735373
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||| ||||| || | | |||||| | |||||||  |||| |||||||||  | |||||| ||| |||  | |||||| ||||||||    
T  3735509 tgtttgatttgtaaaaccgtttcaggtacatgacaaaatggaggcaatggacaggacaaaaactgatatttttgtccatcaccaaaccacagcacaactt 3735410  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  3735409 tttgtcccacgtacaagttgtctaaaataccaaaata 3735373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 258 - 366
Target Start/End: Original strand, 5571617 - 5571725
Alignment:
Q  258 aggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaata 357  Q
    |||||||||| |||||||| |||| ||||||||   | |||||| |||||||  | ||||||||||||||||||||   ||||||||||| |||||||||    
T  5571617 aggacaaactggaggcaagggacaggacaaaaattcatatttttgtccctcaccaaaccacaacacaactttttgtccaacgtacaagttgtctaaaata 5571716  T
Q  358 caaaaatag 366  Q
    | |||||||    
T  5571717 ccaaaatag 5571725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 337
Target Start/End: Original strand, 14011149 - 14011305
Alignment:
Q  181 tgtttgatctgctaaaaaataaaggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaactt-gaggcaagaga 279  Q
    |||||||| || || |||||||||||||  | ||||| |||| ||| |||||||||| || ||| |||||  |||| | ||||||||| | |||||||||    
T  14011149 tgtttgatatgttataaaataaaggacaggacaacttcagttgtactatgtttgatt-gtgaaattgttttagggacatgacaaacttaggggcaagaga 14011247  T
Q  280 caagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatca 337  Q
    ||| ||||||||  |||||||| || |||| || || ||| |||||||||||||||||    
T  14011248 caatacaaaaaccaaaatttttgtctctcactaaactacatcacaactttttgtatca 14011305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 29241530 - 29241374
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||| | |||||||| |||| | ||||| |  | |||||| ||||||   | |||||| ||||||||    
T  29241530 tgtttgatttgtaaaactgtttcaggtacatgacaaattggaggcaagggacaggccaaaagctcatatttttgtccctcgccaaaccacagcacaactt 29241431  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  ||||||||||||  ||||||||  |||||||  |||| ||| ||||||||    
T  29241430 tttgtcccacgtacaagttggctaaaatatcaaaatagcattttgtccctcaaaaat 29241374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 213 - 365
Target Start/End: Original strand, 26180222 - 26180375
Alignment:
Q  213 aacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcatta 312  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||| | || ||| | ||| ||| ||| | |||||||| |||| ||||  | | ||| ||    
T  26180222 aacttcagttatacaatatttgatttgtaaaactgtttttgggacatgataaattggagacaaaagatatgacaaaaatataatttttagttcttcacta 26180321  T
Q  313 taccacaacacaactttttgtatcacgtac-aagttatctaaaatacaaaaata 365  Q
     |||| | ||||||||||| |   |||||| ||||||| |||||||||||||||    
T  26180322 aaccatatcacaactttttatcctacgtacaaagttatttaaaatacaaaaata 26180375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 37148533 - 37148605
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttt 301  Q
    ||||||||||||||||||||||| |||| || ||||||| |||||||| |||  |||||||||  ||||||||    
T  37148533 tgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacgggacaaaaactgaaattttt 37148605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 4664993 - 4664923
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaa 289  Q
    |||||| || ||||||||||||||||| ||||| |||| |||||||||  |||||||| |||| |||||||    
T  4664993 agttatccagtgtttgatttgtaaaacagtttcagggacaggacaaacaggaggcaagggacatgacaaaa 4664923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 342
Target Start/End: Complemental strand, 5673257 - 5673178
Alignment:
Q  263 aaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtac 342  Q
    ||||| |||||||| |||||| |||||||  | |||||| |||||||  | ||||||||||||||||||||  |||||||    
T  5673257 aaactggaggcaagggacaagtcaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtac 5673178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 229 - 383
Target Start/End: Original strand, 11090812 - 11090965
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| |||||||||| ||||| ||| | | |||||||| ||||  |||||   ||| |||||  ||||| ||  |||||| ||  |||| |||||||||    
T  11090812 tgtttaatttgtaaaattgtttttggaacatgacaaactagaggtcagagattggacgaaaactgaaattcttgaccctcactaagccacgacacaactt 11090911  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaa 383  Q
    ||||| ||||||||| ||| |||||||||  |||| |||||||| ||||| ||||    
T  11090912 tttgtctcacgtacacgttgtctaaaatatcaaaa-agttttttgtccataaaaa 11090965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 366
Target Start/End: Complemental strand, 40182549 - 40182479
Alignment:
Q  296 atttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||| |||||||  | |||||| |||||||||||||  || ||||||||| |||||||||| |||||||    
T  40182549 atttttgtccctcaccaaaccacatcacaactttttgtcccatgtacaagttgtctaaaataccaaaatag 40182479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 35955150 - 35955089
Alignment:
Q  230 gtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaac 291  Q
    ||||||||||||||| ||||||   || | |||||||| |||||| ||||||||||||||||    
T  35955150 gtttgatttgtaaaattgtttcaaagacatgacaaactggaggcatgagacaagacaaaaac 35955089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 29788376 - 29788416
Alignment:
Q  211 ataacttaagttatacaatgtttgatttgtaaaactgtttc 251  Q
    |||| ||||||||||| ||||||||||| ||||||||||||    
T  29788376 ataatttaagttatacgatgtttgatttataaaactgtttc 29788416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 5e-33; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 9732868 - 9733024
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| ||||||||||||||  | |||||| |||||||  | |||||||||||||||    
T  9732868 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 9732967  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||  |||||||  |||| ||| ||||||||    
T  9732968 tttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaaaat 9733024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 44284781 - 44284625
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||| ||||||||||||||  | |||||| ||||||| || |||||| ||||||||    
T  44284781 tgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcactaaaccacagcacaactt 44284682  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| ||||||||||||| |||||||||  |||||||  |||| ||| ||||||||    
T  44284681 tttgtctcacgtacaagttgtctaaaataacaaaatagcattttgtccctcaaaaat 44284625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 7259049 - 7258913
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  7259049 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 7258950  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||| ||||||||||||| |||||||||| ||||||    
T  7258949 tttgtctcacgtacaagttgtctaaaataccaaaata 7258913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 7761511 - 7761667
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  7761511 tgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 7761610  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| ||||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  7761611 tttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 7761667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 35114937 - 35114781
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||||||||| ||    
T  35114937 tgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattt 35114838  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  35114837 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 35114781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 37308807 - 37308651
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  37308807 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 37308708  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  ||||||||| || |||||||||| |||||||| |||| ||| | ||||||    
T  37308707 tttgtcccacgtacaaattgtctaaaataccaaaatagtattttgtccctaaaaaat 37308651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 42706511 - 42706355
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| || |||||||||||  | |||||| |||||||  | |||||||||||||||    
T  42706511 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggataagacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 42706412  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  ||| |||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  42706411 tttgtcccacatacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 42706355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 213 - 352
Target Start/End: Original strand, 38623226 - 38623365
Alignment:
Q  213 aacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcatta 312  Q
    ||||| |||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||  || |||||||||||  |||||||| |||||||  |    
T  38623226 aacttcagttatccaatgtttgatttgtaaaactgtttcagggacaggacaaacttgaggcaatggaaaagacaaaaactgaaatttttgtccctcacca 38623325  T
Q  313 taccacaacacaactttttgtatcacgtacaagttatcta 352  Q
     |||||| |||||||||||||  ||| |||||||| ||||    
T  38623326 aaccacagcacaactttttgtcccacatacaagttgtcta 38623365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 3913398 - 3913535
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || ||| |||||||| ||||||||| ||| |||||||||  | || ||| |||||||  | |||||||||||||||    
T  3913398 tgtttgatttgtaaaactgtttcaggtatatgacaaactggaggcaagaaacaggacaaaaactcacatgtttgtccctcaccaaaccacaacacaactt 3913497  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||| |||||||    
T  3913498 tttgttccacgtacaagttgtctaaaataccaaaatag 3913535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 17540867 - 17540710
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||||||||  | | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  17540867 tgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 17540768  T
Q  329 tttgtatcacgtacaagttatctaaaata-caaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| ||||||||| |||||||||| |||| ||| ||||||||    
T  17540767 tttgtcccacgtacaagttgtctaaaataccaaaaatagtattttgtccctcaaaaat 17540710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 38993009 - 38993146
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||| ||||| || | |||||||||| |||||||| |||| |||||||||   ||||||| | |||| | | |||||||||||||||    
T  38993009 tgtttgatttgtaaaacagtttcaggaagaggacaaactggaggcaagggacaggacaaaaactacaatttttgttcctcgtcaaaccacaacacaactt 38993108  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| ||||||||||||||||||    
T  38993109 tttgtcccacgtacaagttgtctaaaatacaaaaatag 38993146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 42365729 - 42365593
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||| ||||| || | | |||||||| |||||||| ||||||||||||||  | |||||| ||| |||| | |||||||||||||||    
T  42365729 tgtttgatttgtaaaaccgtttcaggtacatgacaaactggaggcaagggacaagacaaaaactcatatttttgtccttcatcaaaccacaacacaactt 42365630  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||| ||||||| ||||||| |||||||||| ||||||    
T  42365629 tttatatcacggacaagttgtctaaaataccaaaata 42365593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 226 - 385
Target Start/End: Original strand, 19513624 - 19513783
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||||||||||||||||||||||||| || | |||||||||  |||||||  |||| |||||||||  | |||||| |||||||  | |||||| |||||    
T  19513624 caatgtttgatttgtaaaactgtttcaggtacaggacaaacgggaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaa 19513723  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  19513724 ctttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 19513783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 41366045 - 41366184
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    ||||||||||||||| |||| ||||| |||| | |||||||| ||||||||||| | |||||||||  |||||||| |||||||  | ||||||||||||    
T  41366045 caatgtttgatttgtgaaacagtttcagggacatgacaaactggaggcaagagataggacaaaaactgaaatttttgtccctcaccaaaccacaacacaa 41366144  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
     ||||||| |||| |||||||| |||||||||| ||||||    
T  41366145 ttttttgtctcacatacaagttgtctaaaataccaaaata 41366184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 213 - 367
Target Start/End: Original strand, 40832391 - 40832545
Alignment:
Q  213 aacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcatta 312  Q
    |||||||||| | || ||||||||||||||| || |||| || | | |||||||| |||||||| |||| |||||||||  | |||||| |||||||  |    
T  40832391 aacttaagttgtccagtgtttgatttgtaaagctatttcaggtacaagacaaactggaggcaagggacaggacaaaaacggatatttttgtccctcacca 40832490  T
Q  313 taccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagt 367  Q
     |||||||||||||||||||| ||||||||||||  |||||||||| ||||||||    
T  40832491 aaccacaacacaactttttgtctcacgtacaagtagtctaaaataccaaaatagt 40832545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 5278772 - 5278928
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||| ||    
T  5278772 tgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaattt 5278871  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  5278872 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccttcaaaaat 5278928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 34338962 - 34338806
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | ||||||  ||||||  | |||||| ||||||||    
T  34338962 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgaccctcaccaaaccacagcacaactt 34338863  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||| ||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  34338862 tttgtcccacgcacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 34338806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 16104426 - 16104270
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| |  | | |||||| | |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  16104426 tgtttgatttgtaaaactgtttcagatacacgacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 16104327  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| |||||||||| || |||||||||| |||||||  |||| ||| ||||||||    
T  16104326 tttgtctcacgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaat 16104270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 18685988 - 18685860
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||  ||||||||||||||  | |||||| || ||||  | |||||| ||||||||    
T  18685988 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaagacaaaaactcatatttttgtctctcaccaaaccacagcacaactt 18685889  T
Q  329 tttgtatcacgtacaagttatctaaaata 357  Q
    |||||  |||||||||||| |||||||||    
T  18685888 tttgtcccacgtacaagttgtctaaaata 18685860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 30326270 - 30326425
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||| | |||| |||||||||  | |||||  || |||   | |||||| ||||||||    
T  30326270 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaggggacaggacaaaaactcatattttg-tctctcgccaaaccacagcacaactt 30326368  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| ||||||||||||| |||||||||| |||||||| |||| ||| ||||||||    
T  30326369 tttgtctcacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaat 30326425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 33366762 - 33366626
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| | |||||  | |||||||||||||||    
T  33366762 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgttcctcaccaaaccacaacacaactt 33366663  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||| |  ||| |||||||| |||||||||| ||||||    
T  33366662 tttctcccacatacaagttgtctaaaataccaaaata 33366626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 33889395 - 33889259
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| |||||| |  | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  33889395 tgtttgatttgtaaaattgtttcagatacaggacaaactggaggcaagggacaggacaaaaactcatatttttttccctcaccaaaccacatcacaactt 33889296  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  33889295 tttgtcccacgtacaagttgtctaaaataccaaaata 33889259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 203 - 366
Target Start/End: Complemental strand, 6896346 - 6896183
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    |||||| || ||||| |||| | || ||||||||||||||||||||||| |||| |  ||||||| |||||||| |||| || ||||||  ||||||||     
T  6896346 aggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacaaaacaaactggaggcaagggacaggataaaaactgaaatttttg 6896247  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||||  | || ||| |||||||||||||  |||||||||||| ||||||| || |||||||    
T  6896246 tccctcaccaaacaacagcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatag 6896183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 2645025 - 2645161
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| || | |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  2645025 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag-gagaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 2645123  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  ||| |||||||| |||||||||| |||||||    
T  2645124 tttgtcccacatacaagttgtctaaaataccaaaatag 2645161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 12672412 - 12672549
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || |||||||||||| |||||||| |||  ||||||| |  | |||||| |||||||  | |||||||||||| ||    
T  12672412 tgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagggacgggacaaaatctcatatttttgtccctcaccaaaccacaacacaagtt 12672511  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||| |  || ||||||||| |||||||||| |||||||    
T  12672512 tttatcccaagtacaagttgtctaaaataccaaaatag 12672549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 30798426 - 30798583
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataa-atttttatccctcattataccacaacacaact 327  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||| |||| || |||||  | | |||||| |||||||  | |||||| |||||||    
T  30798426 tgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggaaaaaaaactcatatttttgtccctcaccaaaccacatcacaact 30798525  T
Q  328 ttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||| |  ||||||||||||||||||||||| |||||||  |||| ||| ||||||||    
T  30798526 ttttatcccacgtacaagttatctaaaataccaaaatagcattttgtccctcaaaaat 30798583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 176 - 355
Target Start/End: Original strand, 10399750 - 10399934
Alignment:
Q  176 gggtttgtttgatctgctaaaaaataaaggacaaaata-----acttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttga 270  Q
    |||| |||||||| ||||||||||| |||||||  |||     |||| |||| | || |||||||||||||||||| |||| || | |||||||||| ||    
T  10399750 gggtgtgtttgatttgctaaaaaatgaaggacatgatagaacaacttcagttgttcagtgtttgatttgtaaaactatttcaggtacaggacaaactaga 10399849  T
Q  271 ggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaa 355  Q
     |||||| ||| |||||||||  | |||||| ||| ||| || |||||||||||||||||||| ||| ||| ||||| |||||||    
T  10399850 tgcaagatacaggacaaaaactcatatttttgtccttcactaaaccacaacacaactttttgtctcatgtataagttgtctaaaa 10399934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 32498067 - 32497931
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | ||||||||  ||||||| |||| |||||||||  | |||||| | |||||  | |||||| ||||||||    
T  32498067 tgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtacctcaccaaaccacatcacaactt 32497968  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  32497967 tttgtcccacgtacaagttgtctaaaataccaaaata 32497931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 32766442 - 32766579
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaac-t 327  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||| |||| |||||||||  | |||||| |||||||  | ||||||||||||| |    
T  32766442 tgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactt 32766541  T
Q  328 ttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||||   ||||||| ||| |||||||||| ||||||    
T  32766542 ttttgtcctacgtacaggttgtctaaaataccaaaata 32766579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 231 - 358
Target Start/End: Original strand, 15303180 - 15303307
Alignment:
Q  231 tttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttt 330  Q
    ||||||||||||||||| ||| | || |||||||||| ||||||||| ||| ||||||||||||||||||| ||| | || | || ||| ||||||||||    
T  15303180 tttgatttgtaaaactgcttcagagacaggacaaactagaggcaagacacatgacaaaaacataaatttttgtcctttatcaaactacatcacaactttt 15303279  T
Q  331 tgtatcacgtacaagttatctaaaatac 358  Q
    |||  ||| |  ||||| ||||||||||    
T  15303280 tgttccacatgtaagttgtctaaaatac 15303307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 229 - 364
Target Start/End: Original strand, 16177821 - 16177956
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||||||||  | | |||| ||||| |||||||  |||| |||| ||||  | |||||| || || |  | |||||||||||||||    
T  16177821 tgtttgatttgtaaaactgtttcaagtacaggataaactggaggcaatggacaggacataaactgatatttttgtcgcttaccaaaccacaacacaactt 16177920  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaat 364  Q
    ||||| ||||||||||||| |||||||||| |||||    
T  16177921 tttgtctcacgtacaagttgtctaaaataccaaaat 16177956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 28824495 - 28824632
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | || ||| ||| ||| |||| | || |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  28824495 tgtttgatttgtaaaactgtttcaggtacagcacatactggagtcaagggtcaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactt 28824594  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||| | |||||| |||||| |||||||||| |||||||    
T  28824595 tttatctcacgtgcaagttgtctaaaatactaaaatag 28824632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 229 - 333
Target Start/End: Complemental strand, 8112452 - 8112348
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| |||||| || | || ||||||| |||||||||||||| ||||||||  | |||||| || ||||  | |||||||||||||||    
T  8112452 tgtttgatttgtaaaattgtttcaggtacagaacaaactggaggcaagagacaatacaaaaactcatatttttgtctctcaccaaaccacaacacaactt 8112353  T
Q  329 tttgt 333  Q
    |||||    
T  8112352 tttgt 8112348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 258 - 365
Target Start/End: Complemental strand, 13829561 - 13829454
Alignment:
Q  258 aggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaata 357  Q
    |||||||||| |||| ||| |||| |||||||||  |||||||| ||| ||| || |||||| |||||||||||||  || ||||||||||||||||| |    
T  13829561 aggacaaactggaggtaagggacaggacaaaaactgaaatttttgtccatcactagaccacatcacaactttttgtcccaggtacaagttatctaaaaca 13829462  T
Q  358 caaaaata 365  Q
    | ||||||    
T  13829461 ccaaaata 13829454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 2394421 - 2394249
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttt-tatccctcattataccacaacacaact 327  Q
    ||||| |||||||||||| |||| |||  |||||||| |||| ||| |||| |||||||||||  ||||||| | ||||||  || | |||| |||||||    
T  2394421 tgtttaatttgtaaaactatttcagggc-aggacaaatttgaagcatgaga-aagacaaaaactgaaattttgtgtccctcgctaaagcacagcacaact 2394324  T
Q  328 ttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaattattcaataccataaaa 402  Q
    |||| | ||| | | | ||| |||||||||||| ||||||||||| |||  |||||||||||||||| |||||||    
T  2394323 ttttatctcatgcatatgttgtctaaaatacaataatagttttttgtcctccaaaaattattcaatatcataaaa 2394249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 82953 - 82881
Alignment:
Q  331 tgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaattattcaataccataaaagt 404  Q
    ||||||| ||||||||||||||||| ||||||||||| |||| |||  |||||||||||||||| |||||||||    
T  82953 tgtatcatgtacaagttatctaaaacacaaaaatagt-ttttgtcccccaaaaattattcaatatcataaaagt 82881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 365
Target Start/End: Complemental strand, 30713036 - 30712872
Alignment:
Q  205 gacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatc 304  Q
    ||||||| ||||  |||||| || |||||||||||||| |||||||| |||| || |||| || |||||||| |||| |||| ||||  |||||||| ||    
T  30713036 gacaaaacaactccagttatccagtgtttgatttgtaatactgtttcagggacagaacaacctggaggcaagggacaggacacaaactgaaatttttgtc 30712937  T
Q  305 cctc-----attataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||     |||| |||||||||||||||||| |  |||||| ||||| ||||||| || ||||||    
T  30712936 cctcaccaaatta-accacaacacaactttttatcccacgtagaagttgtctaaaacaccaaaata 30712872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 297 - 385
Target Start/End: Complemental strand, 9717308 - 9717220
Alignment:
Q  297 tttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| |||||||  | |||||| |||||||||||||  |||||||||||| |||||||||| |||||||| |||| ||| ||||||||    
T  9717308 tttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaat 9717220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 233 - 365
Target Start/End: Complemental strand, 41934729 - 41934597
Alignment:
Q  233 tgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttg 332  Q
    ||||||||||||||| ||  |||||  || ||||| || |||| |||||||||||||||  ||||| || | | ||| || |||||||||||||||||||    
T  41934729 tgatttgtaaaactgattaagggatgagataaactggatgcaaaagacaagacaaaaactgaaattcttgtacttcactaaaccacaacacaactttttg 41934630  T
Q  333 tatcacgtacaagttatctaaaatacaaaaata 365  Q
    |   ||||| ||||| |||||||||| ||||||    
T  41934629 tcctacgtataagttgtctaaaataccaaaata 41934597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 39461466 - 39461310
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcatta---taccacaacacaa 325  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| ||||||||      ||||| |||||||  |    || |||||||||    
T  39461466 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaaaaa---ttgtttttgtccctcaccaaatcacaacaacacaa 39461370  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||| | ||||||||||| | |||||||||| |||||||  |||| ||| ||||||||    
T  39461369 ctttttatctcacgtacaagctgtctaaaataccaaaatagcattttgtccctcaaaaat 39461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 363
Target Start/End: Original strand, 26981647 - 26981781
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||| | |  | | |||||||  |||||||  |||| |||||||||  | |||||| |||||||  | ||||||||| |||||    
T  26981647 tgtttgatttgtaaaactgttccagatacaagacaaacgggaggcaaatgacatgacaaaaactcatatttttgtccctcaccaaaccacaacaaaactt 26981746  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaa 363  Q
    |||||   ||||||||||| |||||||||| ||||    
T  26981747 tttgttctacgtacaagttgtctaaaataccaaaa 26981781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 26796380 - 26796225
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||| |  ||| |  |||||||| ||||||  || | || |||||   |||||| | ||||||| || | |||||| ||||||    
T  26796380 tgtttgatttgtaaaactgttacaaggacaaaacaaacttcaggcaatggataggataaaaattaaaatttgtgtccctcactaaagcacaacgcaactt 26796281  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| ||||||||||  ||||||| |||| |||| |||||||    
T  26796280 tttgtcacacgtacaagttgtctaaaatac-caaatagtcttttgtccaccaaaaat 26796225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 18127004 - 18127079
Alignment:
Q  307 tcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaa 382  Q
    |||||| |||||||||||||||||||| ||| ||||||||||| |||||||  ||||||   |||| |||||||||    
T  18127004 tcattaaaccacaacacaactttttgtctcaagtacaagttatgtaaaatagcaaaataacgttttgtccatcaaa 18127079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 367
Target Start/End: Complemental strand, 11114995 - 11114886
Alignment:
Q  258 aggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaata 357  Q
    |||||||||| |||||||| |||| ||||||||   | |||||| | |||||  | |||||| |||||||||||||  |||| ||||||| ||||||||     
T  11114995 aggacaaactggaggcaagggacaggacaaaaaatcatatttttgttcctcaccaaaccacatcacaactttttgtcccacgcacaagttgtctaaaatt 11114896  T
Q  358 caaaaatagt 367  Q
    | ||||||||    
T  11114895 ccaaaatagt 11114886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 269 - 386
Target Start/End: Complemental strand, 26419035 - 26418918
Alignment:
Q  269 gaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagtt 368  Q
    ||||| || |||| |||||||||  | |||||| | |||||  | |||||| |||||||||||||  |||||||||||| |||||||||| ||||||       
T  26419035 gaggcgagggacatgacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataaca 26418936  T
Q  369 ttttatccatcaaaaatt 386  Q
    ||||||||  ||||||||    
T  26418935 ttttatcccccaaaaatt 26418918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 269 - 362
Target Start/End: Complemental strand, 36843574 - 36843481
Alignment:
Q  269 gaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaa 362  Q
    |||||||||||||||||||||||  |||||| | |||||||  | ||||||| |  || ||||||  |||||| || |||||||||||||||||    
T  36843574 gaggcaagagacaagacaaaaaccgaaatttgtgtccctcaccaaaccacaaaatcaccttttgtcccacgtataatttatctaaaatacaaaa 36843481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 37003873 - 37003942
Alignment:
Q  296 atttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||| |||||||  | ||||||||||||||||||||  ||||||||| || |||||||||| ||||||    
T  37003873 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattgtctaaaataccaaaata 37003942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 269 - 365
Target Start/End: Original strand, 12939278 - 12939374
Alignment:
Q  269 gaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||||| |||| |||||||||  | |||||| ||| |||  | |||||| ||||||||||| | ||||||||||||| ||||| |||| ||||||    
T  12939278 gaggcaagggacatgacaaaaactgatatttttgtccttcaccaaaccacagcacaactttttatctcacgtacaagttgtctaagataccaaaata 12939374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 358
Target Start/End: Original strand, 35472903 - 35473067
Alignment:
Q  194 aaaaaataaaggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacat 293  Q
    ||||||| |||||||  | || || |||||| || | |||| ||||||||||| | |||  || |||||||| | |||||||| |||||| |||||||      
T  35472903 aaaaaatgaaggacattacaatttcagttatgcactctttggtttgtaaaactatatctatgaaaggacaaattggaggcaagggacaagtcaaaaactg 35473002  T
Q  294 aaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatac 358  Q
    ||||| |||| ||||| || |||||    ||| |||||||  |||||||||||| ||||||||||    
T  35473003 aaattcttattcctcactaaaccactctgcaattttttgtcccacgtacaagttgtctaaaatac 35473067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 40692449 - 40692321
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| |||||| |||||||||  || | | |||||||| ||| |||| |||| |||||||||    |||||| |||||||  | ||||||  |||||||    
T  40692449 tgtttaatttgtgaaactgttttaggtacaagacaaactggagacaagggacaggacaaaaactcgtatttttgtccctcaccaaaccacagaacaactt 40692350  T
Q  329 tttgtatcacgtacaagttatctaaaata 357  Q
    |||||  |||||||||||| |||||||||    
T  40692349 tttgtcccacgtacaagttgtctaaaata 40692321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 226 - 330
Target Start/End: Original strand, 40876559 - 40876663
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    ||||||||||||||||||||| |||   ||| | |||| ||  |||| ||| |||| ||||||| |  |||||||||||  |||||| ||||||||||||    
T  40876559 caatgtttgatttgtaaaactattttaaggacatgacacaccggaggtaagggacatgacaaaagctcaaatttttatctttcattaaaccacaacacaa 40876658  T
Q  326 ctttt 330  Q
    |||||    
T  40876659 ctttt 40876663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 229 - 331
Target Start/End: Original strand, 27462740 - 27462842
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||  || | | ||||||||  || |||| |||||||||||| |    |||||| |||||||  | |||||||||||||||    
T  27462740 tgtttgatttgtaaaactgttttaggtacatgacaaactgtagacaagggacaagacaaaagctgttatttttgtccctcaccaaaccacaacacaactt 27462839  T
Q  329 ttt 331  Q
    |||    
T  27462840 ttt 27462842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 274
Target Start/End: Original strand, 37863304 - 37863349
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggca 274  Q
    ||||||||||||||||||||||| || | |||||||||| ||||||    
T  37863304 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggca 37863349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 366
Target Start/End: Complemental strand, 4641583 - 4641531
Alignment:
Q  314 accacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||| ||||||||||||| |||| |||||||| | |||||||| |||||||    
T  4641583 accacagcacaactttttgtctcacatacaagttgtttaaaataccaaaatag 4641531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 2e-32; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 172 - 366
Target Start/End: Original strand, 36769446 - 36769645
Alignment:
Q  172 cttagggtttgtttgatctgctaaaaaataaaggacaaaata-----acttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaac 266  Q
    |||||||| |||||||| ||||||||||| ||||||| ||||     |||  |||| | || ||||||||||||||||||||||| || | |||||||||    
T  36769446 cttagggtgtgtttgatttgctaaaaaatgaaggacagaatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaac 36769545  T
Q  267 ttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    | |||||||| |||| |||||||||  | |||||| |||||||  | |||||| |||||||||||||  |||||||||||| |||||||||| |||||||    
T  36769546 tagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 36769645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 21785027 - 21784890
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| ||||||||||||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  21785027 tgtttgatttgtaaaactgtttcaggcacatgacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 21784928  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||| |||||||    
T  21784927 tttgtcccacgtacaagttgtctaaaataccaaaatag 21784890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 3922642 - 3922798
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| ||||||||||||||||| || | |||||||||| |||||||| ||||||||||||||  | |||||| | |||||  | |||||| ||||||||    
T  3922642 tgttttatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgttcctcaccaaaccacagcacaactt 3922741  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  ||||||||||||||||||||||| |||||||  |||| ||| ||||||||    
T  3922742 tttgtcccacgtacaagttatctaaaataccaaaatagcattttgtccctcaaaaat 3922798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 10932496 - 10932652
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | || ||||||||||||    
T  10932496 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaactacaacacaactt 10932595  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  10932596 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 10932652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 47953346 - 47953190
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  47953346 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 47953247  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  47953246 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 47953190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 219 - 370
Target Start/End: Original strand, 21408556 - 21408706
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccac 318  Q
    |||| |||||| ||||||||||||| |||||| ||||| |  ||||||| |||||||| |||| |||||| ||| |||  ||| |||||||||| |||||    
T  21408556 agttgtacaatatttgatttgtaaagctgtttttgggacaacacaaactggaggcaagggacatgacaaagaca-aaacatttgtccctcattaaaccac 21408654  T
Q  319 aacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagtttt 370  Q
    |||| |||||||| | ||| ||||||||||||||||||||||||||||||||    
T  21408655 aacataactttttatttcatgtacaagttatctaaaatacaaaaatagtttt 21408706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 226 - 385
Target Start/End: Complemental strand, 40753314 - 40753155
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | | |||| |||||    
T  40753314 caatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaa 40753215  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  40753214 ctttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 40753155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 182 - 366
Target Start/End: Complemental strand, 44748903 - 44748714
Alignment:
Q  182 gtttgatctgctaaaaaataaaggaca-----aaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaag 276  Q
    ||||||| |||||||||||||||||||     ||| ||||  |||| | || ||||||||||||||||||||||| || | | |||||||| ||||||||    
T  44748903 gtttgatttgctaaaaaataaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaag 44748804  T
Q  277 agacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
     ||||  ||||||||  |||||||| |||||||  | ||||||| ||||||||||||  |||||||||||| |||||||||| |||||||    
T  44748803 ggacagaacaaaaactcaaatttttgtccctcaccaaaccacaatacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 44748714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 183 - 366
Target Start/End: Complemental strand, 1363843 - 1363655
Alignment:
Q  183 tttgatctgctaaaaaataaagga-----caaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaaga 277  Q
    |||||| |||||||||||||||||     ||||| ||||| |||| | || |||||||||||||||| ||||||  | | |||||||||| ||||||||     
T  1363843 tttgatttgctaaaaaataaaggataggacaaaacaacttcagttgtccagtgtttgatttgtaaaattgtttcatgtacaggacaaactggaggcaagg 1363744  T
Q  278 gacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||| ||||||| |  | |||||| |||||||| | |||||| ||||||||||||| ||||||||| ||| || |||||||||||||||    
T  1363743 gacatgacaaaagctgatatttttgtccctcatcaaaccacatcacaactttttgtctcacgtacaggttgtcaaaaatacaaaaatag 1363655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 30598947 - 30599083
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| ||||||||||||||||| || | |||||||||| |||||||| |||| ||||||| |  | |||||| |||||||| | |||||||||||||||    
T  30598947 tgtttcatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaagctcatatttttgtccctcatcaaaccacaacacaactt 30599046  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||| ||| |||||| ||||||||||||| ||||||    
T  30599047 tttgtctcaagtacaaattatctaaaataccaaaata 30599083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 226 - 385
Target Start/End: Original strand, 11321821 - 11321980
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    |||||||||||||||||||||| ||| || | |||||||||| |||||||  |||| |||||||||  | |||||| |||||||  | |||||| |||||    
T  11321821 caatgtttgatttgtaaaactgattcaggtacaggacaaactggaggcaacggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaa 11321920  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  11321921 ctttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 11321980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 329626 - 329489
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| |||| || ||||||| |||||||  ||||||||||||||  |||||||| |||||||  | |||||| ||||||||    
T  329626 tgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactt 329527  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  ||||||||||||  |||||| || |||||||    
T  329526 tttgtcccacgtacaagttgcctaaaacaccaaaatag 329489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 41211139 - 41211276
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  41211139 tgtttgatttgtaaaactgtttcaggtacaagacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 41211238  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||| |||||||    
T  41211239 tttgtcccacgtacaagttgtctaaaataccaaaatag 41211276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 38301498 - 38301371
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| ||||||||||||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  38301498 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactt 38301399  T
Q  329 tttgtatcacgtacaagttatctaaaata 357  Q
    |||||  |||| ||||||| |||||||||    
T  38301398 tttgtcccacg-acaagttgtctaaaata 38301371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 43158625 - 43158781
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| ||||| |  | |||||||||||||||    
T  43158625 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactt 43158724  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| ||||||| |  |||||||  |||| ||| ||||||||    
T  43158725 tttgtcccacgtacaagttgtctaaaacatcaaaatagcattttgtccctcaaaaat 43158781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 47316637 - 47316793
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| |||||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  47316637 tgtttgatttgtaaaattgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 47316736  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||| |||| | |||||| |||||| ||| |||||||  |||| ||| ||||||||    
T  47316737 tttgtctcacatgcaagttgtctaaattaccaaaatagcattttgtccctcaaaaat 47316793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 181 - 385
Target Start/End: Original strand, 32873658 - 32873864
Alignment:
Q  181 tgtttgatctgctaaaaaataaaggaca--aaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagag 278  Q
    |||||||| ||||||||||| |||||||  | | ||||  |||| | || |||||||||||||||| |||||| || |  ||| ||||| |||||||| |    
T  32873658 tgtttgatttgctaaaaaatgaaggacaggacaaaactctagttgtccattgtttgatttgtaaaattgtttcaggtaccggataaactggaggcaaggg 32873757  T
Q  279 acaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccat 378  Q
    ||| |||||||||  | |||||| ||| |||  | |||||||||||||||||||| ||||||||||||| ||| |||||| |||||||  |||| ||| |    
T  32873758 acaggacaaaaactcatatttttgtccttcaccaaaccacaacacaactttttgtctcacgtacaagttgtctgaaataccaaaatagcattttgtccct 32873857  T
Q  379 caaaaat 385  Q
    |||||||    
T  32873858 caaaaat 32873864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 26910349 - 26910487
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||| ||||| |||| ||| |||||| |||||||| |||| || ||||||   ||||||| ||||||   | |||||||||||||||    
T  26910349 tgtttgatttgtaaaacagtttcagggacagggcaaactggaggcaagggacaggataaaaactgcaatttttgtccctcgccaaaccacaacacaactt 26910448  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagt 367  Q
    |||||  |||||||||||| || ||||||||||||||||    
T  26910449 tttgtcacacgtacaagttgtcaaaaatacaaaaatagt 26910487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 26994164 - 26994301
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||| |||| ||||||| |  | |||||| |||||||  | |||||| ||||||||    
T  26994164 tgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacagcacaactt 26994263  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  |||||||||||| |||||||||| |||||||    
T  26994264 tttgtcccacgtacaagttgtctaaaataccaaaatag 26994301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 43368357 - 43368220
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||||  |||||||||  | |||||| | |||||  | |||||| ||||||||    
T  43368357 tgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagagacgggacaaaaactgatatttttgtgcctcagcaaaccacagcacaactt 43368258  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||   ||||||||||| |||||||||  |||||||    
T  43368257 tttgtcctacgtacaagttgtctaaaatatcaaaatag 43368220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 357
Target Start/End: Complemental strand, 1870291 - 1870163
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | || ||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  1870291 tgtttgatttgtaaaactgtttcaggtacaagataaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 1870192  T
Q  329 tttgtatcacgtacaagttatctaaaata 357  Q
    |||||  |||||||||||| |||||||||    
T  1870191 tttgtcccacgtacaagttgtctaaaata 1870163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 227 - 371
Target Start/End: Complemental strand, 2049109 - 2048965
Alignment:
Q  227 aatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaac 326  Q
    ||||||||||||| |||| ||||| |||||  ||||||||| ||||||||  |||  ||||||| |||||||||| ||| ||| || ||||||||| |||    
T  2049109 aatgtttgatttgaaaaattgtttttgggacgggacaaactagaggcaaggaacataacaaaaatataaatttttgtccatcactaaaccacaacaaaac 2049010  T
Q  327 tttttgtatcacgtacaagttatctaaaatacaaaaatagttttt 371  Q
     ||||||  |||||| |||||||  ||||||||||||||||||||    
T  2049009 attttgtcccacgtagaagttataaaaaatacaaaaatagttttt 2048965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 18386680 - 18386525
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||| |||| ||||||| |  | |||||| |||||||  | |||||| ||||||||    
T  18386680 tgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaa-ctcatatttttgtccctcaccaaaccacagcacaactt 18386582  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  18386581 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 18386525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 26371748 - 26371904
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||| |||||| |||| || | |||||||||| |||||||| |||| |||||||||  | |||||| |||||||  | | |||| ||||||||    
T  26371748 tgtttgatttgcaaaactatttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactt 26371847  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  26371848 tttgtcccacgtacaagttgtctaaaatactaaaatagcattttgtccctcaaaaat 26371904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 227 - 366
Target Start/End: Complemental strand, 21133530 - 21133391
Alignment:
Q  227 aatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaac 326  Q
    ||||||| |||||||||||||||||  | | ||||||||||  ||||||| ||||||||||||||  | ||| || ||||||| || |||||| ||||||    
T  21133530 aatgtttaatttgtaaaactgtttcaagtacaggacaaactgaaggcaagggacaagacaaaaactgatattattttccctcaataaaccacatcacaac 21133431  T
Q  327 tttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||||||| |||| ||||| || |||||||||| |||||||    
T  21133430 tttttgtctcacatacaaattgtctaaaataccaaaatag 21133391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 29661479 - 29661342
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||| ||||| ||| || | | |||||||| |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  29661479 tgtttgatttgtagaactgattcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 29661380  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||| |  ||||||||||||||||||||||| |||||||    
T  29661379 tttatcccacgtacaagttatctaaaataccaaaatag 29661342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 230 - 366
Target Start/End: Original strand, 22724471 - 22724607
Alignment:
Q  230 gtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaacttt 329  Q
    |||||||||||||||| ||||| |||| |||||||||| |||||||| || | ||||||| |   ||||||| |||||||  | |||||| | |||||||    
T  22724471 gtttgatttgtaaaacagtttcagggacaggacaaactggaggcaagggatatgacaaaagctgcaatttttgtccctcaccaaaccacagcgcaacttt 22724570  T
Q  330 ttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
     |||  |||||||||||| ||||||||||||||||||    
T  22724571 atgtcccacgtacaagttgtctaaaatacaaaaatag 22724607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 203 - 367
Target Start/End: Complemental strand, 34519690 - 34519526
Alignment:
Q  203 aggacaaaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaattttta 302  Q
    |||||| || ||||| |||| | || |||| || ||||||||| ||||| |||| | ||||| || |||||||| |||| |||||||||   |||||||     
T  34519690 aggacagaacaacttcagttgtccagtgttcgaattgtaaaacagtttcagggacatgacaagctggaggcaagggacaggacaaaaactgcaatttttg 34519591  T
Q  303 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagt 367  Q
    ||||||   | ||||||||||||||||||||  || ||||||||| |||||||||||||||||||    
T  34519590 tccctcgccaaaccacaacacaactttttgtcccaggtacaagttgtctaaaatacaaaaatagt 34519526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 46633848 - 46633697
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| |  | |||||||||| |||| |     ||||||||||||  | ||||||||||||||  | |||||| ||||||||    
T  46633848 tgtttgatttgtaaaactgtttcagatacaggacaaactggaggaa-----caagacaaaaactcatatttttatccctcaccaaaccacagcacaactt 46633754  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  46633753 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 46633697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 181 - 355
Target Start/End: Complemental strand, 37967183 - 37967004
Alignment:
Q  181 tgtttgatctgctaaaaaataaaggaca-----aaataacttaagttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaa 275  Q
    |||||||| ||||||||||| |||||||     ||| ||||| |||| | |  ||||||||||||||||||||||| || | | |||||| | || ||||    
T  37967183 tgtttgatttgctaaaaaatgaaggacatgacaaaacaactttagttctccggtgtttgatttgtaaaactgtttcaggtacatgacaaattggatgcaa 37967084  T
Q  276 gagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaa 355  Q
    | ||||||||||||||  | |||||| ||  ||| || |||||| |||||||||||||  ||||||||||||||||||||    
T  37967083 gggacaagacaaaaacccatatttttgtctttcactagaccacatcacaactttttgttccacgtacaagttatctaaaa 37967004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 229 - 372
Target Start/End: Original strand, 43189181 - 43189324
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||| ||||| |||||| || | |||||||||| |||| ||| |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  43189181 tgtttgatttataaaaatgtttcaggtacaggacaaactggaggtaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 43189280  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagtttttt 372  Q
    ||| |  |||||||||||| |||| ||||| |||||||| ||||    
T  43189281 tttatcccacgtacaagttgtctagaataccaaaatagtatttt 43189324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 18470838 - 18470704
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||||| ||||||  ||||| |||||||||  | |||||| || ||||  | |||||| || |||||    
T  18470838 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggca--agacaggacaaaaactcatatttttgtctctcaccaaaccacagcataactt 18470741  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  18470740 tttgtcccacgtacaagttgtctaaaataccaaaata 18470704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 273 - 385
Target Start/End: Original strand, 29992677 - 29992789
Alignment:
Q  273 caagagacaagacaaaaacataaatttttatccctcattataccacaac-acaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttt 371  Q
    |||||||||||| ||||||||||||||||||||||| ||| |  |  || | |||||||||| |||||||||||||||||||||||| |||||| |||||    
T  29992677 caagagacaagataaaaacataaatttttatccctcgttaaattattacgaaaactttttgtctcacgtacaagttatctaaaatac-aaaataattttt 29992775  T
Q  372 tatccatcaaaaat 385  Q
    | |||| |||||||    
T  29992776 tgtccaccaaaaat 29992789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 30849182 - 30849321
Alignment:
Q  226 caatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaa 325  Q
    ||||| |||||||||||||||||||  || | |||||||||| | |||||| |||| |||||||||  | |||||| |||||||  | ||||||||||||    
T  30849182 caatgattgatttgtaaaactgttttaggtacaggacaaactggtggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaa 30849281  T
Q  326 ctttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||||||  ||  |||||||| | |||||||| ||||||    
T  30849282 ctttttgtcccatatacaagttgtataaaataccaaaata 30849321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 229 - 347
Target Start/End: Complemental strand, 16963294 - 16963176
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||| || | |||||||||  | |||||| ||||| || | ||||||| |||||||    
T  16963294 tgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagggataggacaaaaactcatatttttgtcccttatcaaaccacaatacaactt 16963195  T
Q  329 tttgtatcacgtacaagtt 347  Q
    |||||  ||||||||||||    
T  16963194 tttgtcccacgtacaagtt 16963176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 219 - 365
Target Start/End: Complemental strand, 48445687 - 48445541
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccac 318  Q
    |||||| |||||||| ||||||||||||||||  |||| || ||||||| |||||||| |||| |||||||||  |||||||| ||| |||  | | |||    
T  48445687 agttatccaatgtttaatttgtaaaactgtttgagggacagaacaaactggaggcaagggacatgacaaaaactgaaatttttgtccttcaccaaatcac 48445588  T
Q  319 aacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |  |||||||||||| || | |||||||| ||||||| || ||||||    
T  48445587 aggacaactttttgtctcgcatacaagttgtctaaaacacgaaaata 48445541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 229 - 364
Target Start/End: Original strand, 23349230 - 23349365
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||| |||||||||| ||||  | | | |||||||| |||||||| ||||  ||||||||  | |||||| |||||||  | |||||||||||||||    
T  23349230 tgtttgaattgtaaaactatttcaagtacatgacaaactggaggcaagggacagaacaaaaactgatatttttgtccctcaccaaaccacaacacaactt 23349329  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaat 364  Q
    |||||  ||| |||||||| |||||||||| |||||    
T  23349330 tttgtcccacatacaagttgtctaaaatactaaaat 23349365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 229 - 355
Target Start/End: Complemental strand, 17237232 - 17237106
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| | |||| || | || ||||||| || |||||  ||| |||||||||  | |||||| ||  ||| || |||||||||||||||    
T  17237232 tgtttgatttgtaaaattatttcaggtacagtacaaactggatgcaaggaacatgacaaaaactcatatttttgtcattcactaaaccacaacacaactt 17237133  T
Q  329 tttgtatcacgtacaagttatctaaaa 355  Q
    ||||| |||||||||| ||||||||||    
T  17237132 tttgtctcacgtacaaattatctaaaa 17237106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 22723971 - 22724108
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||| ||||| ||||  ||||||||| |||| ||| |||| |||||||||   ||| ||| ||| ||   | |||||||| ||||||    
T  22723971 tgtttgatttgtaaaacagtttcagggaccggacaaactcgaggtaagggacaggacaaaaactgcaatgtttgtccatcgccaaaccacaacgcaactt 22724070  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    ||| |  |||||||||||| | ||||||||||||||||    
T  22724071 tttatcccacgtacaagttgtataaaatacaaaaatag 22724108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 219 - 366
Target Start/End: Original strand, 34295340 - 34295480
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccac 318  Q
    |||||| || ||||||||||||||||||||||| || | | |||||||| ||||||||       ||||||||  | |||||| |||||||  | |||||    
T  34295340 agttatccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaag-------acaaaaactgatatttttgtccctcagcaaaccac 34295432  T
Q  319 aacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    | |||||||||||||  |||||||||||| |||||||||  |||||||    
T  34295433 agcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag 34295480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 43213864 - 43214001
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||   | | ||||||||||  ||||||| ||||||| |||| |  | |||||| ||| |||  | |||||||||||||||    
T  43213864 tgtttgatttgtaaaactgttttcagtacaggacaaactgaaggcaagggacaagataaaagctgatatttttgtccttcaccaaaccacaacacaactt 43213963  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  ||| |||||||| || ||||||| |||||||    
T  43213964 tttgtcccacatacaagttgtcaaaaataccaaaatag 43214001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 281 - 366
Target Start/End: Complemental strand, 48699502 - 48699417
Alignment:
Q  281 aagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||||||||  ||||| || ||||||| || |||||||||||||| |||||  |||||||||||| |||||||||| |||||||    
T  48699502 aagacaaaaactgaaattcttgtccctcactaaaccacaacacaactatttgttccacgtacaagttgtctaaaataccaaaatag 48699417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 229 - 333
Target Start/End: Complemental strand, 11250773 - 11250669
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||| |||||||||| |||||| || | |||||||||| |||||||| |||| ||||||||   | |||||| |||||||  | |||||||||||||||    
T  11250773 tgtttcatttgtaaaattgtttcaggtacaggacaaactggaggcaagggacaggacaaaaaatcatatttttgtccctcaccaaaccacaacacaactt 11250674  T
Q  329 tttgt 333  Q
    |||||    
T  11250673 tttgt 11250669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 229 - 333
Target Start/End: Complemental strand, 11822379 - 11822275
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||| ||||||||||||  || | |||||||||| || ||||| |||| |||||||||  | |||||| ||| ||| || |||||||||||||||    
T  11822379 tgtttgattcgtaaaactgtttgaggtacaggacaaactggatgcaagggacatgacaaaaactcatatttttgtccttcactaaaccacaacacaactt 11822280  T
Q  329 tttgt 333  Q
    |||||    
T  11822279 tttgt 11822275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 314 - 366
Target Start/End: Original strand, 41665599 - 41665651
Alignment:
Q  314 accacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  41665599 accacatcacaactttttgtctcacgtacaagttgtctaaaatacaaaaatag 41665651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 229 - 364
Target Start/End: Complemental strand, 20127445 - 20127310
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||| ||||||| |||| || | |||||||||| |||||||| |||| ||||||| |  | |||||| | |||||  | |||||| ||||||||    
T  20127445 tgtttgatttttaaaactatttcaggtacaggacaaactggaggcaagggacaggacaaaagctgatatttttgttcctcagcaaaccacatcacaactt 20127346  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaat 364  Q
    |||||  ||||||||| || | |||||||| |||||    
T  20127345 tttgtcccacgtacaatttgtgtaaaataccaaaat 20127310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 355
Target Start/End: Complemental strand, 48894873 - 48894747
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| |||||| || | || ||||||| || ||||| |||| |||||||||  | |||||| ||  ||| || |||||| ||||||||    
T  48894873 tgtttgatttgtaaaattgtttcaggtacagtacaaactggatgcaagggacaggacaaaaactcatatttttgtcattcactaaaccacatcacaactt 48894774  T
Q  329 tttgtatcacgtacaagttatctaaaa 355  Q
    |||||  ||||||||| | ||||||||    
T  48894773 tttgtcccacgtacaaatcatctaaaa 48894747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 296 - 367
Target Start/End: Complemental strand, 46627259 - 46627188
Alignment:
Q  296 atttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagt 367  Q
    ||||||||||||||| | |||||| ||||| ||||||| ||||||||   || |||||||||||||||||||    
T  46627259 atttttatccctcatcaaaccacagcacaattttttgtctcacgtacggattgtctaaaatacaaaaatagt 46627188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 47383815 - 47383754
Alignment:
Q  324 aactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||||| | ||| ||||||||||||||||| || |||||||| |||||||||| ||||||    
T  47383815 aactttttatctcaagtacaagttatctaaaacactaaaatagtcttttatccataaaaaat 47383754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 366
Target Start/End: Original strand, 3891994 - 3892102
Alignment:
Q  258 aggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaata 357  Q
    |||||||||| |||||||| |||| |||||||||  | |||||| || ||||  | | |||| |||||||||||||   ||||||||||| |||| ||||    
T  3891994 aggacaaactggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcctacgtacaagttgtctagaata 3892093  T
Q  358 caaaaatag 366  Q
    | |||||||    
T  3892094 ccaaaatag 3892102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 9913680 - 9913545
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||| |||| || | |||| ||||| |||||||| |||| ||||||||  | |  |||| || ||||  | |||||| ||||||||    
T  9913680 tgtttgatttgtaaaactatttcaggtacaggataaactagaggcaagggacaggacaaaaa-ttgatattttgtcgctcaccaaaccacatcacaactt 9913582  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||| |  |||||||| ||| |||||||||| ||||||    
T  9913581 tttttcccacgtacaggttgtctaaaataccaaaata 9913545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 9927368 - 9927233
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||||| |||| || | |||| ||||| |||||||| |||| ||||||||  | |  |||| || ||||  | |||||| ||||||||    
T  9927368 tgtttgatttgtaaaactatttcaggtacaggataaactagaggcaagggacaggacaaaaa-ttgatattttgtcgctcaccaaaccacatcacaactt 9927270  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||| |  |||||||| ||| |||||||||| ||||||    
T  9927269 tttttcccacgtacaggttgtctaaaataccaaaata 9927233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 255 - 391
Target Start/End: Complemental strand, 42332189 - 42332053
Alignment:
Q  255 gataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaa 354  Q
    ||||||| ||| | |||||||  |||| |||||||||||||||| |  | | |||  | |||||| ||||||||||||| |||| ||||| || ||| ||    
T  42332189 gataggataaattggaggcaaatgacaggacaaaaacataaattctagttcttcaccaaaccacatcacaactttttgtctcacatacaaattgtcttaa 42332090  T
Q  355 atacaaaaatagttttttatccatcaaaaattattca 391  Q
    |||  ||||||   ||||||||| |||||||||||||    
T  42332089 atatcaaaataacattttatccaccaaaaattattca 42332053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 385
Target Start/End: Complemental strand, 47947824 - 47947760
Alignment:
Q  321 cacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||||||||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  47947824 cacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 47947760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 373
Target Start/End: Original strand, 8054400 - 8054459
Alignment:
Q  314 accacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagtttttta 373  Q
    |||| ||||||||||||||| ||| ||||||||| | |||||||| |||||||| |||||    
T  8054400 accataacacaactttttgtctcaagtacaagttttttaaaataccaaaatagtctttta 8054459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 7958687 - 7958633
Alignment:
Q  324 aactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccat 378  Q
    |||||||||| | | ||||||||| |||||||||| ||||||||||||| |||||    
T  7958687 aactttttgtctgaagtacaagttgtctaaaataccaaaatagttttttgtccat 7958633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 366
Target Start/End: Complemental strand, 26652955 - 26652885
Alignment:
Q  296 atttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||| |||||||  | |||||| |||||||||||||  |||||||||||| |||||||||  |||||||    
T  26652955 atttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatag 26652885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 356
Target Start/End: Original strand, 29372767 - 29372845
Alignment:
Q  278 gacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaat 356  Q
    |||| |||||||||  |||||||| ||| ||| || |||||||||||||||| |||  || ||||||||| ||||||||    
T  29372767 gacacgacaaaaactaaaatttttgtccgtcactaaaccacaacacaactttctgttccatgtacaagttgtctaaaat 29372845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 318 - 388
Target Start/End: Complemental strand, 38360138 - 38360068
Alignment:
Q  318 caacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaattat 388  Q
    ||||| || ||||||| |||| |||||||| | ||||||||||||||| | |||| |||| ||||||||||    
T  38360138 caacataattttttgtctcacctacaagttgtttaaaatacaaaaataatattttgtccaacaaaaattat 38360068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 229 - 355
Target Start/End: Original strand, 46448583 - 46448709
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| |||||| || |  | ||||||| || ||||| |||| || ||||||  | |||||| ||| ||| || |||||| ||||||||    
T  46448583 tgtttgatttgtaaaattgtttcaggtacggtacaaactggatgcaagggacatgataaaaactcatatttttgtccgtcactaaaccacagcacaactt 46448682  T
Q  329 tttgtatcacgtacaagttatctaaaa 355  Q
    |||||  || ||| || ||||||||||    
T  46448683 tttgtcccatgtataaattatctaaaa 46448709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 26700633 - 26700572
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaa 290  Q
    ||||||||||||| ||||||||| || | | |||||||| ||||||||||| | ||||||||    
T  26700633 tgtttgatttgtataactgtttcaggtacatgacaaactggaggcaagagaaaggacaaaaa 26700572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 367
Target Start/End: Complemental strand, 35645553 - 35645465
Alignment:
Q  278 gacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagt 367  Q
    |||||||||||||| | |||| |  ||||||| || |||||||||||||||||| |   ||||||||||| |||||||||  ||||||||    
T  35645553 gacaagacaaaaac-tgaattctcgtccctcactaaaccacaacacaactttttatcgtacgtacaagttgtctaaaataataaaatagt 35645465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 382
Target Start/End: Original strand, 42073029 - 42073090
Alignment:
Q  321 cacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaa 382  Q
    ||||| ||||||| |||  |||||||| ||||||||||||||||| | ||||||||| ||||    
T  42073029 cacaattttttgtttcaaatacaagttgtctaaaatacaaaaataatattttatccaccaaa 42073090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 35026430 - 35026362
Alignment:
Q  224 tacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaaca 292  Q
    |||| |||||||||| ||||||||||| ||||| | |||||||| ||| |||  |||| ||||||||||    
T  35026430 tacactgtttgatttataaaactgtttatgggacatgacaaactagagacaaatgacatgacaaaaaca 35026362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 229 - 372
Target Start/End: Original strand, 2282 - 2425
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | |||||||| | |||||||| |||| |||||||||  | |||||| |||||||  | |||||| ||||||||    
T  2282 tgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 2381  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagtttttt 372  Q
    |||||  |||||||||||| |||||||||| |||||||||||||    
T  2382 tttgtcccacgtacaagttgtctaaaataccaaaatagtttttt 2425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 17998 - 18154
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||| | |||||||| |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  17998 tgtttgatttgtaaaactgtttcaggtacatgacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 18097  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||| |||||||  |||| ||| ||||||||    
T  18098 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 18154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 278 - 385
Target Start/End: Original strand, 12529 - 12636
Alignment:
Q  278 gacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatcca 377  Q
    |||| |||||||||  | |||||| |||||||  | ||||||||||||||||||||  |||||||||||| |||||||||| |||||||  |||| |||     
T  12529 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccc 12628  T
Q  378 tcaaaaat 385  Q
    ||||||||    
T  12629 tcaaaaat 12636  T

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Target: scaffold0054 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 23727 - 23591
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||| |||| |||||||||  | |||||| ||| |||  | |||||| ||||||||    
T  23727 tgtttgatttgtaaaactgtttcaggtacaggacaaacttgaggcaagggacatgacaaaaactcatatttttgtccttcaccaaaccacagcacaactt 23628  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  23627 tttgtcccacgtacaagttgtctaaaataccaaaata 23591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 219 - 385
Target Start/End: Complemental strand, 20069 - 19903
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccac 318  Q
    ||||||||| |||||||| |||||||||||||  | |||| |||||| |  ||  ||| || | |||||||||  ||||| || || |||| || |||||    
T  20069 agttatacagtgtttgatatgtaaaactgttttagagataagacaaattgtagaaaagggatatgacaaaaactgaaattcttgtcactcactaaaccac 19970  T
Q  319 aacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
       |||||||||||| ||||||||||||| | | |||||| |||||||| |||| | ||||||||||    
T  19969 tgtacaactttttgtttcacgtacaagttgtttgaaataccaaaatagtcttttgttcatcaaaaat 19903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 42894 - 43030
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| |||| || ||||||| |||||||| ||||  ||||||||  |||||| | |||||||  | |||||||||||||||    
T  42894 tgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacagaacaaaaactgaaatttgtgtccctcaccaaaccacaacacaactt 42993  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  ||||||||| || ||||||| || |||||||    
T  42994 tttgtcccacgtacaa-ttgtctaaaacaccaaaatag 43030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 5383 - 5520
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagac-aaaaacataaatttttatccctcattataccacaacacaact 327  Q
    ||||||||||||||||||||||| || | | |||||||| |||||||| |||| ||| ||||||| | |||||| |||||||  | |||||| |||||||    
T  5383 tgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaaacacatatttttgtccctcaccaaaccacatcacaact 5482  T
Q  328 ttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    ||||||  ||| ||||||||  ||||||||||||||||    
T  5483 ttttgtcccacatacaagttgcctaaaatacaaaaata 5520  T

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Target: scaffold0098 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 385
Target Start/End: Complemental strand, 51590 - 51435
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| ||   || ||||||| || ||||| ||||||||||||||  | |||||| |||||||  | |||||| ||||||||    
T  51590 tgtttgatttgtaaaactgtttcaggtgcagaacaaactggatgcaagggacaagacaaaaactcatatttttgtccctca-caaaccacagcacaactt 51492  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    |||||  |||||||||||| |||||||||  |||||||  |||| ||| ||||||||    
T  51491 tttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaaaat 51435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 219 - 366
Target Start/End: Complemental strand, 102111 - 101964
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccac 318  Q
    |||||| || |||||||||||||||||||||||  | | |||||||  | |||||||  |||| |||||||||  | |||||| |||||||  | |||||    
T  102111 agttatccagtgtttgatttgtaaaactgtttcatgtacaggacaacttggaggcaacggacatgacaaaaactcatatttttgtccctcaccaaaccac 102012  T
Q  319 aacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    | |||||||||||||  |||||||||||| |||||||||| |||||||    
T  102011 atcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 101964  T

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Target: scaffold0004 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 372906 - 373044
Alignment:
Q  227 aatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaac 326  Q
    ||||||||||||||||||||||||| || | || | ||||| ||| |||| || | |||||||||  | |||||| |||||||  | |||| ||||||||    
T  372906 aatgtttgatttgtaaaactgtttcaggtacagaaaaaactggagacaagggatatgacaaaaactcatatttttgtccctcaccaaaccataacacaac 373005  T
Q  327 tttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||||  |||||||||||| |||||||||| ||||||    
T  373006 tttttgtcccacgtacaagttgtctaaaataccaaaata 373044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 13631 - 13768
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| |||||| |||| || ||||||| |||||||| || | |||||||||  |||||||| |||||||  | ||||||  |||||||    
T  13631 tgtttgatttgtaaaattgtttcagggacagaacaaactggaggcaagggataggacaaaaactgaaatttttgtccctcaccaaaccacagtacaactt 13730  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||  ||| |||||||| ||||||| || |||||||    
T  13731 tttgtcccacttacaagttgtctaaaacaccaaaatag 13768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 19036 - 19170
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||| | || | |||||||||| ||||||||||||| ||||||| |  | |||||| |||||||  | | |||| ||||||||    
T  19036 tgtttgatttgtaaaactgtt-caggtacaggacaaactggaggcaagagacaggacaaaa-ctcatatttttgtccctcaccaaatcacagcacaactt 19133  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    |||||  |||||||||||| |||||||||| ||||||    
T  19134 tttgtcccacgtacaagttgtctaaaataccaaaata 19170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 219 - 385
Target Start/End: Original strand, 3556 - 3728
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaac---ttgaggcaagagacaagacaaaaacataaatttttatccctcattatac 315  Q
    ||||||||  |||||||||||||||| ||||| | | | | |||||||   |||| ||||| ||||| |||||||||||||||||  ||||| | || ||    
T  3556 agttatacggtgtttgatttgtaaaattgtttttagaacatgacaaacaacttgatgcaagggacaaaacaaaaacataaattttg-tcccttactaaac 3654  T
Q  316 cacaacacaactttttgtatcacgt------acaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||||| ||||||||  ||| |||      ||||||||||||||||||||||||||||||||||||| |||||||    
T  3655 cacaacataacttttt--atcgcgtccgtatacaagttatctaaaatacaaaaatagttttttatccaccaaaaat 3728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 15317 - 15462
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaaga--------caaaaacataaatttttatccctcattataccacaa 320  Q
    ||||||||||||||||||||||| || | |||| ||||| |||||||| |||||||        |||||||  | |||||| |||||||  | |||||||    
T  15317 tgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagggacaagatcacatgacaaaaactcatatttttgtccctcaccaaaccacaa 15416  T
Q  321 cacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
    |||||||||||||  || ||||||||| |||||||||| |||||||    
T  15417 cacaactttttgtcccatgtacaagttgtctaaaataccaaaatag 15462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 385
Target Start/End: Original strand, 13614 - 13679
Alignment:
Q  320 acacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaaat 385  Q
    ||||||||||||||  || ||||||||| |||| ||||| |||||||| |||| ||||||||||||    
T  13614 acacaactttttgtcacatgtacaagttgtctagaataccaaaatagtattttgtccatcaaaaat 13679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 219 - 338
Target Start/End: Original strand, 19090 - 19209
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccac 318  Q
    |||||| || ||||||||||||||||||||||| |||| || | ||||  |||||||  |||| |||||||||  |||||||| |||||||| | | | |    
T  19090 agttatccagtgtttgatttgtaaaactgtttcagggacagaataaacaggaggcaatggacaggacaaaaactgaaatttttgtccctcatcaaagctc 19189  T
Q  319 aacacaactttttgtatcac 338  Q
    ||||||||||||||| ||||    
T  19190 aacacaactttttgtctcac 19209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 229 - 355
Target Start/End: Original strand, 4523 - 4649
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    |||||||||||||||| || ||  || |||| ||||| | |||||||| |||| |||||||||  | |||||| |||||||  | |||||||||||||||    
T  4523 tgtttgatttgtaaaattgatttaggtatagcacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 4622  T
Q  329 tttgtatcacgtacaagttatctaaaa 355  Q
    |||||  |||||| ||||| |||||||    
T  4623 tttgtcccacgtaaaagttgtctaaaa 4649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 366
Target Start/End: Original strand, 2440 - 2576
Alignment:
Q  229 tgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 328  Q
    ||||||||||||||||||||||| || | | |||||| | |||| ||| |||| |||||||||  | || ||| ||||| |  | ||||||||||||| |    
T  2440 tgtttgatttgtaaaactgtttcaggtacaagacaaattggaggaaagggacaggacaaaaactcatatctttgtccctaaccaaaccacaacacaac-t 2538  T
Q  329 tttgtatcacgtacaagttatctaaaatacaaaaatag 366  Q
     |||| ||||||||||||| |||||||||| |||||||    
T  2539 attgtctcacgtacaagttgtctaaaataccaaaatag 2576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 295 - 377
Target Start/End: Complemental strand, 13142 - 13059
Alignment:
Q  295 aatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaata-caaaaatagttttttatcca 377  Q
    |||||||||||||||||| || ||| ||  ||||||||||||| ||| ||||||||||||||| ||||||||  ||||||||||    
T  13142 aatttttatccctcattaaactacatcattactttttgtatcaagtataagttatctaaaataccaaaaataactttttatcca 13059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 383
Target Start/End: Original strand, 33553 - 33642
Alignment:
Q  294 aaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccatcaaaa 383  Q
    ||||| || |||||||| | ||||||||||||||||||||  ||||||||| || | |||||||| |||||||  |||| ||||||||||    
T  33553 aaattcttgtccctcatcaaaccacaacacaactttttgtcccacgtacaaattgtataaaataccaaaataggcttttgtccatcaaaa 33642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 365
Target Start/End: Original strand, 108239 - 108385
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaacttgaggcaagagacaagacaaaaacataaatttttatccctcattataccac 318  Q
    |||| |||||||||||| |||||||||| |    |||| | |||||||| | |||||||||||||||||||||  ||| |||| ||  ||| || | |||    
T  108239 agttgtacaatgtttgaattgtaaaactatacaagggacatgacaaactgggggcaagagacaagacaaaaaccaaaaattttgtcattcactaaagcac 108338  T
Q  319 aacacaactttttgtatcacgtacaagttatctaaaatacaaaaata 365  Q
    || |||||||||||| ||| || ||| || |||||| ||| ||||||    
T  108339 aatacaactttttgtctcaagtgcaaattgtctaaagtaccaaaata 108385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 6876 - 6922
Alignment:
Q  219 agttatacaatgtttgatttgtaaaactgtttctgggataggacaaa 265  Q
    |||| |||| ||||| ||||||||||||||||||||||| |||||||    
T  6876 agttgtacagtgtttaatttgtaaaactgtttctgggatgggacaaa 6922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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