View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10400_1 (Length: 626)

Name: NF10400_1
Description: NF10400
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10400_1
NF10400_1
[»] chr5 (35 HSPs)
chr5 (262-497)||(41369689-41369925)
chr5 (1-173)||(12278872-12279044)
chr5 (1-173)||(17332563-17332735)
chr5 (1-173)||(31680350-31680522)
chr5 (1-173)||(31501728-31501900)
chr5 (8-176)||(37254621-37254789)
chr5 (1-142)||(33430335-33430476)
chr5 (1-173)||(10033910-10034082)
chr5 (1-173)||(13817960-13818132)
chr5 (7-176)||(36293639-36293808)
chr5 (1-176)||(39434676-39434851)
chr5 (1-178)||(26283330-26283507)
chr5 (1-156)||(39657518-39657673)
chr5 (1-138)||(16155015-16155152)
chr5 (7-154)||(1776394-1776541)
chr5 (1-126)||(16333888-16334013)
chr5 (7-177)||(3155649-3155819)
chr5 (1-154)||(19985941-19986094)
chr5 (2-137)||(43068896-43069031)
chr5 (1-173)||(36291354-36291526)
chr5 (306-584)||(41324312-41324590)
chr5 (304-566)||(41337150-41337412)
chr5 (237-572)||(41366334-41366666)
chr5 (306-572)||(41316243-41316509)
chr5 (307-572)||(31188382-31188647)
chr5 (30-143)||(28801300-28801415)
chr5 (307-501)||(31225166-31225360)
chr5 (304-569)||(41332221-41332486)
chr5 (321-569)||(41328225-41328473)
chr5 (307-501)||(31178408-31178602)
chr5 (361-575)||(41310558-41310772)
chr5 (453-572)||(41286399-41286518)
chr5 (71-173)||(202622-202724)
chr5 (126-173)||(26543902-26543949)
chr5 (307-347)||(41286280-41286320)
[»] chr4 (45 HSPs)
chr4 (1-176)||(43143596-43143771)
chr4 (1-176)||(42333788-42333963)
chr4 (1-173)||(3292908-3293080)
chr4 (1-173)||(6690247-6690419)
chr4 (1-173)||(30216754-30216926)
chr4 (1-173)||(50205089-50205261)
chr4 (7-173)||(10352902-10353068)
chr4 (1-176)||(20129290-20129465)
chr4 (1-176)||(25930688-25930863)
chr4 (1-173)||(28877262-28877434)
chr4 (1-173)||(48989311-48989483)
chr4 (1-176)||(26439291-26439466)
chr4 (1-176)||(34407296-34407471)
chr4 (1-178)||(47500751-47500928)
chr4 (1-176)||(13012168-13012343)
chr4 (1-139)||(44156668-44156806)
chr4 (1-176)||(29319717-29319892)
chr4 (1-156)||(36382358-36382512)
chr4 (1-176)||(43355884-43356059)
chr4 (1-173)||(29995995-29996167)
chr4 (8-146)||(17511252-17511391)
chr4 (2-173)||(26448036-26448206)
chr4 (1-132)||(35545977-35546108)
chr4 (7-178)||(30077649-30077819)
chr4 (1-173)||(40528996-40529170)
chr4 (30-167)||(30109945-30110084)
chr4 (272-577)||(17249065-17249370)
chr4 (30-176)||(48129950-48130087)
chr4 (1-101)||(6235575-6235675)
chr4 (2-121)||(1817752-1817871)
chr4 (1-78)||(13392893-13392970)
chr4 (1-78)||(13396032-13396109)
chr4 (56-173)||(45194159-45194276)
chr4 (71-173)||(27363344-27363446)
chr4 (115-176)||(7769308-7769369)
chr4 (119-173)||(49908782-49908836)
chr4 (63-131)||(6254569-6254637)
chr4 (119-173)||(5517494-5517548)
chr4 (120-173)||(6212029-6212082)
chr4 (120-173)||(17554979-17555032)
chr4 (108-173)||(13392989-13393054)
chr4 (108-173)||(13396128-13396193)
chr4 (71-172)||(20113775-20113876)
chr4 (119-172)||(50720476-50720529)
chr4 (120-178)||(12680193-12680251)
[»] chr3 (19 HSPs)
chr3 (1-176)||(11018224-11018399)
chr3 (1-173)||(45182964-45183136)
chr3 (1-176)||(6503581-6503756)
chr3 (1-173)||(6930906-6931078)
chr3 (1-173)||(33040936-33041108)
chr3 (1-176)||(6269438-6269613)
chr3 (1-176)||(27935158-27935333)
chr3 (7-173)||(19565519-19565685)
chr3 (1-156)||(19390146-19390301)
chr3 (1-176)||(22968456-22968631)
chr3 (1-176)||(39771770-39771945)
chr3 (1-156)||(34084134-34084289)
chr3 (7-173)||(45335858-45336023)
chr3 (1-173)||(35514249-35514417)
chr3 (1-143)||(40081753-40081893)
chr3 (30-134)||(5135291-5135397)
chr3 (119-173)||(6890981-6891035)
chr3 (56-173)||(5354692-5354809)
chr3 (99-172)||(22922141-22922214)
[»] chr8 (16 HSPs)
chr8 (1-176)||(34136837-34137012)
chr8 (1-176)||(4403988-4404163)
chr8 (1-173)||(23402091-23402263)
chr8 (1-158)||(16788037-16788194)
chr8 (1-173)||(29728398-29728570)
chr8 (1-156)||(15838286-15838440)
chr8 (2-169)||(36408538-36408705)
chr8 (1-142)||(3648806-3648947)
chr8 (2-134)||(9877242-9877374)
chr8 (1-173)||(2729208-2729380)
chr8 (1-176)||(39914495-39914669)
chr8 (30-140)||(3435285-3435397)
chr8 (1-124)||(42230971-42231092)
chr8 (71-169)||(10397122-10397220)
chr8 (63-133)||(40470567-40470637)
chr8 (22-81)||(376459-376519)
[»] chr7 (22 HSPs)
chr7 (8-176)||(34389075-34389243)
chr7 (1-173)||(37002156-37002328)
chr7 (1-173)||(8867743-8867915)
chr7 (1-176)||(5555467-5555642)
chr7 (1-147)||(35090177-35090323)
chr7 (1-179)||(43184480-43184658)
chr7 (1-173)||(26624728-26624901)
chr7 (1-176)||(3114108-3114283)
chr7 (1-177)||(14777119-14777295)
chr7 (1-173)||(33685547-33685719)
chr7 (1-173)||(7002708-7002880)
chr7 (1-173)||(7048579-7048751)
chr7 (1-156)||(8394125-8394280)
chr7 (1-156)||(36630816-36630971)
chr7 (1-133)||(38638248-38638380)
chr7 (1-137)||(40920015-40920151)
chr7 (1-138)||(36658199-36658336)
chr7 (30-97)||(10868514-10868583)
chr7 (66-169)||(26502797-26502899)
chr7 (66-169)||(26589815-26589917)
chr7 (111-158)||(10876829-10876876)
chr7 (120-172)||(37966614-37966666)
[»] chr2 (23 HSPs)
chr2 (1-173)||(45418566-45418738)
chr2 (1-173)||(8147334-8147507)
chr2 (1-177)||(42439965-42440141)
chr2 (1-173)||(8059345-8059517)
chr2 (1-153)||(41251646-41251798)
chr2 (1-173)||(44084615-44084787)
chr2 (8-173)||(770977-771147)
chr2 (1-176)||(35962695-35962870)
chr2 (1-178)||(17445053-17445228)
chr2 (1-176)||(6403816-6403991)
chr2 (1-138)||(12756849-12756986)
chr2 (1-156)||(31581634-31581789)
chr2 (1-176)||(32127153-32127328)
chr2 (19-178)||(2958131-2958289)
chr2 (7-176)||(18981597-18981765)
chr2 (1-153)||(16405603-16405755)
chr2 (8-137)||(26162721-26162847)
chr2 (1-131)||(2285887-2286017)
chr2 (42-158)||(26237955-26238071)
chr2 (30-169)||(4555250-4555390)
chr2 (30-147)||(7072589-7072710)
chr2 (126-173)||(34523223-34523270)
chr2 (77-136)||(34905969-34906028)
[»] chr6 (16 HSPs)
chr6 (1-178)||(28996708-28996885)
chr6 (1-156)||(18339106-18339261)
chr6 (1-176)||(34948770-34948945)
chr6 (7-173)||(29743266-29743432)
chr6 (1-178)||(398595-398772)
chr6 (1-176)||(13837801-13837976)
chr6 (2-140)||(33229349-33229487)
chr6 (71-172)||(24697899-24698000)
chr6 (60-170)||(31028435-31028545)
chr6 (120-178)||(13646995-13647053)
chr6 (71-172)||(24695472-24695572)
chr6 (120-173)||(34385519-34385572)
chr6 (119-170)||(2753336-2753387)
chr6 (78-141)||(3050094-3050157)
chr6 (119-173)||(21149331-21149385)
chr6 (79-128)||(24072576-24072625)
[»] chr1 (15 HSPs)
chr1 (8-176)||(35907532-35907700)
chr1 (8-173)||(17445296-17445461)
chr1 (1-176)||(26144235-26144410)
chr1 (1-177)||(7433424-7433600)
chr1 (12-173)||(42310964-42311125)
chr1 (1-173)||(3828967-3829138)
chr1 (9-156)||(32982076-32982223)
chr1 (8-173)||(321396-321561)
chr1 (30-173)||(41972314-41972458)
chr1 (30-173)||(33489670-33489815)
chr1 (50-177)||(23313217-23313345)
chr1 (120-178)||(44352614-44352672)
chr1 (119-173)||(31866960-31867014)
chr1 (91-173)||(48901207-48901288)
chr1 (71-137)||(35951427-35951493)
[»] scaffold0502 (1 HSPs)
scaffold0502 (1-156)||(5230-5385)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-173)||(31463-31635)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-176)||(17822-17997)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-176)||(480469-480644)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-137)||(52944-53080)
[»] scaffold2142 (1 HSPs)
scaffold2142 (1-176)||(502-677)
[»] scaffold0769 (1 HSPs)
scaffold0769 (126-173)||(1260-1307)
[»] scaffold0012 (1 HSPs)
scaffold0012 (65-163)||(194021-194118)


Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 262 - 497
Target Start/End: Original strand, 41369689 - 41369925
Alignment:
Q  262 acatattagagttcaaatcagcaatggaggaatcaataaagttattgggaggattttgcattgctgatttgtatccttctattaaaatagttcaaagggt 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41369689 acatattagagttcaaatcagcaatggaggaatcaataaagttattggaaggattttgcattgctgatttgtatccttctattaaaatacttcaaagggt 41369788  T
Q  362 gagtagggcaaagaccaaaatggaaaaacttcagagagaggc-tgatatgatattgcaagatatcatcaatgatcacaaaagtaatcatagagaagaaat 460  Q
     |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||  |||||||||||||||||    
T  41369789 aagtagggcaaagaccaaaatggaaaaacttcagagaaaggcatgatattatattgcaagatatcatcaatgatcacaaaaacaatcatagagaagaaat 41369888  T
Q  461 caaggaagaagacctagttgatgttcttctaaagatt 497  Q
    |||||||||||||||||||||||||||||||| ||||    
T  41369889 caaggaagaagacctagttgatgttcttctaatgatt 41369925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 12278872 - 12279044
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12278872 tcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcctttggg 12278971  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||    
T  12278972 ttgggtctaatgtgcaaaaattatcgatcgagtccgggcgaccgcccgggatcgccgggcggtgaaaccgccc 12279044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 17332563 - 17332735
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17332563 tcaatagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 17332662  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  17332663 ttgggtctaatatgcaaaaattatcgatcgagcccgggcgaacgcccggggtcgccgggcggtgaaaccgccc 17332735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31680522 - 31680350
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31680522 tcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 31680423  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31680422 ttgggtctaatgcggaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 31680350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 31501728 - 31501900
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31501728 tcaatagtgtgctaaataaaatttcgagacctatttgcgtgcgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 31501827  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||    
T  31501828 ttgggtctaatgtgcaaaaattatcgatcgagcccgggcaatcgcccggggtcgccgggcggtgaaaccgccc 31501900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 8 - 176
Target Start/End: Complemental strand, 37254789 - 37254621
Alignment:
Q  8 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  37254789 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggttgggtc 37254690  T
Q  108 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||||    
T  37254689 taatgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgccgagcggtgaaaccgcccatg 37254621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 33430476 - 33430335
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33430476 tcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 33430377  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgac 142  Q
    ||| |||||||| |||||||||||||||||||||||||||||    
T  33430376 ttgggtctaatgcgcaaaaattatcgatcgagcccgggcgac 33430335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 10034082 - 10033910
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  10034082 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 10033983  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||  |||||  ||||||||    
T  10033982 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgatcgtccggggtcgccatacggtagaaccgccc 10033910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 13818132 - 13817960
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  13818132 tcaatagtgtgctaaataaatttccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 13818033  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||  ||||||||    
T  13818032 ttgagtctaatgtgcaaaaattatcgatcgagcccgagcgaccgcccggggtcgccatacggtagaaccgccc 13817960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 7 - 176
Target Start/End: Original strand, 36293639 - 36293808
Alignment:
Q  7 gtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 106  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  36293639 gtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagt 36293738  T
Q  107 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    ||||||| |||||||||||||||||| |||| ||||||| ||||||||||  |||||  |||||||||||    
T  36293739 ctaatgtacaaaaattatcgatcgagtccggacgaccgctcggggtcgccacacggtagaaccgcccatg 36293808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 39434851 - 39434676
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||  |||||||||| | ||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  39434851 tcaatagtgtgctaaataaaattcaaagacctatttacatgtgacaattttcagattgcccaaatttttcattttgtaaatgtgttaatgggcttttggg 39434752  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||  |||||  |||||||||||    
T  39434751 ttgagtctaatgtgaaaaaattatcgatcgagcccgggcgaccgcccagggtcgccacacggtagaaccgcccatg 39434676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 26283330 - 26283507
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||| |||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||   ||||| ||    
T  26283330 tcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgaactttttgg 26283429  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatgtt 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||   |||||| |||||||||||||    
T  26283430 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgctacacggtggaaccgcccatgtt 26283507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 39657518 - 39657673
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  39657518 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgagcttttggg 39657617  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 156  Q
    ||||||||||||||||||||||||| ||||||||||  |||||| | |||||||||    
T  39657618 ttgagtctaatgtgcaaaaattatcaatcgagcccgaacgaccgtctggggtcgcc 39657673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 16155152 - 16155015
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||||||| ||||||||||    
T  16155152 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcctaaatttttctttttataaatgtgttaatgggcttttggg 16155053  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccggg 138  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16155052 ttgagtctaatgtgcaaaaattatcgatcgagcccggg 16155015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 7 - 154
Target Start/End: Original strand, 1776394 - 1776541
Alignment:
Q  7 gtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 106  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||| | ||||| |||||| |    
T  1776394 gtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgact 1776493  T
Q  107 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcg 154  Q
     |||||| ||||||||||||||||||||||||||||||||||||||||    
T  1776494 ttaatgtacaaaaattatcgatcgagcccgggcgaccgcccggggtcg 1776541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 16333888 - 16334013
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  16333888 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 16333987  T
Q  101 ttgagtctaatgtgcaaaaattatcg 126  Q
    |||| |||||||||||||||||||||    
T  16333988 ttgaatctaatgtgcaaaaattatcg 16334013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 7 - 177
Target Start/End: Original strand, 3155649 - 3155819
Alignment:
Q  7 gtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 106  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||||| |||||||||||||||| ||| ||||||||| | ||||| ||||||||    
T  3155649 gtgtgctaaataaaattccaagatctatttgcgtgtgacaattttcagattgtccaaatttttctttttataaatgtgttaatggacttttaggttgagt 3155748  T
Q  107 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatgt 177  Q
    | |||||||||||||||| ||||||||||| ||||||||||||| |||||  ||| |  ||||||||||||    
T  3155749 cgaatgtgcaaaaattattgatcgagcccgagcgaccgcccgggatcgccatacgatagaaccgcccatgt 3155819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 19986094 - 19985941
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||| ||||||||||| | |||||||||||||||||| |||||| ||||| ||||||||||||||||||||| |||| |||| | ||||||||    
T  19986094 tcaatagtgtgttaaataaaatttcaagacctatttgcgtgtgataatttttagattacccaaatttttctttttgtaaatgtgctaatggacttttggg 19985995  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcg 154  Q
    |||| |||||||||||||||||||||||||||| ||| |||||||||| |||||    
T  19985994 ttgaatctaatgtgcaaaaattatcgatcgagctcggacgaccgcccgaggtcg 19985941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 43069031 - 43068896
Alignment:
Q  2 caattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggt 101  Q
    |||| |||||||||||||||||||||||| ||||| | ||| |||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  43069031 caatagtgtgctaaataaaattccgagacttatttacatgtaagaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttgggt 43068932  T
Q  102 tgagtctaatgtgcaaaaattatcgatcgagcccgg 137  Q
    || |||||||||| ||||||||| ||||||||||||    
T  43068931 tgggtctaatgtgaaaaaattattgatcgagcccgg 43068896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 36291526 - 36291354
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||| |||||||||||| |||||||||||| |||| | |||||| ||||||||||||||||||||||||||| |||||||||   ||||| ||    
T  36291526 tcaatagtgtgttaaataaaattctgagacctatttgtgtgtaataattttgagattgcccaaatttttctttttgtaaatgtgttaatgaacttttagg 36291427  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||   ||||||||||||||||||| |||||| ||||| ||||||||||| |||| ||| ||||||||||||||    
T  36291426 ttagatctaatgtgcaaaaattattgatcgaacccggacgaccgcccggagtcggcgggcggtgaaaccgccc 36291354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 306 - 584
Target Start/End: Original strand, 41324312 - 41324590
Alignment:
Q  306 ttgggaggattttgcattgctgatttgtatccttctattaaaatagttcaaagggtgagtagggcaaagaccaaaatggaaaaacttcagagagaggctg 405  Q
    ||||||||  |||| |||| |||||||||||||||||||||| |  ||||| | ||||||||||| ||| ||||||||||||||||||| | ||||  ||    
T  41324312 ttgggaggcatttgtattgttgatttgtatccttctattaaattgcttcaatgcgtgagtagggcgaaggccaaaatggaaaaacttcacaaagagattg 41324411  T
Q  406 atatgatattgcaagatatcatcaatgatcacaaaagtaatcatagagaagaaatcaaggaagaagacctagttgatgttcttctaaagattcaacgaga 505  Q
    |||||||||||||||| || ||| | ||||||||||| | ||| |  ||||| | ||| |||||| | ||||| ||||||||||| ||||||||||  ||    
T  41324412 atatgatattgcaagacattatcgacgatcacaaaagcattcacaaggaagatagcaatgaagaatatctagtagatgttcttctcaagattcaacagga 41324511  T
Q  506 aaccgatcactcagaacaccccttgactgatgacagtataaaagcagtcattcaggttagtctacaataaaaaatgtta 584  Q
    ||   |||||||| |||| || || || ||||||| ||||||  || |||| |||||||||| ||||| |||| |||||    
T  41324512 aaattatcactcacaacatcctttaaccgatgacaatataaagtcaatcatccaggttagtcaacaatcaaaagtgtta 41324590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 304 - 566
Target Start/End: Original strand, 41337150 - 41337412
Alignment:
Q  304 tattgggaggattttgcattgctgatttgtatccttctattaaaatagttcaaagggtgagtagggcaaagaccaaaatggaaaaacttcagagagaggc 403  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||||| |||||| ||| ||||| |  ||||||| | | || | | | ||  |||||      
T  41337150 tattgggagaattttgtattgctgacttgtatccttctattaaaatacttcaaaaggtaagtagagtgaagaccagagttgagagattacaaggagagat 41337249  T
Q  404 tgatatgatattgcaagatatcatcaatgatcacaaaagtaatcatagagaagaaatcaaggaagaagacctagttgatgttcttctaaagattcaacga 503  Q
    ||||| |||||||||||| |||||||||||||| | ||  ||||| ||  ||  || |||||| ||||||||||||||||||||||| ||| ||||||      
T  41337250 tgataggatattgcaagacatcatcaatgatcatagaaacaatcacagtaaaacaagcaaggatgaagacctagttgatgttcttctcaaggttcaacat 41337349  T
Q  504 gaaaccgatcactcagaacaccccttgactgatgacagtataaaagcagtcattcaggttagt 566  Q
    ||||  | ||||||| |||| |||||||||||||| | ||||||| |||||||||||||||||    
T  41337350 gaaaatgttcactcacaacaacccttgactgatgaaaatataaaatcagtcattcaggttagt 41337412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 237 - 572
Target Start/End: Original strand, 41366334 - 41366666
Alignment:
Q  237 gcagcttttggaaaaaagagtagacacatattagagttcaaatcagcaatggaggaatcaataaagttattgggaggattttgcattgctgatttgtatc 336  Q
    ||||| ||||||||||||| || ||||  |  || ||| |||||||||||| |||||  | | ||| |||||||||||||||   |||| ||||||||||    
T  41366334 gcagcatttggaaaaaagaataaacaccaagaagtgtttaaatcagcaatgaaggaaatatttaagctattgggaggattttcttttgcagatttgtatc 41366433  T
Q  337 cttctattaaaatagttcaaagggtgagtagggcaaagaccaaaatggaaaaacttcagagagaggctgatatgatattgcaagatatcatcaatgatca 436  Q
    |||||||||||||  |||||| | | ||| || ||| ||  ||| | ||||||||||| |||||| ||||||||||||||||||| |||||| |||||||    
T  41366434 cttctattaaaattcttcaaatgttaagttggccaaggaaaaaacttgaaaaacttcatagagagactgatatgatattgcaagagatcatcgatgatca 41366533  T
Q  437 caaaagtaatcatagagaagaaatcaaggaagaa----gacctagttgatgttcttctaaagattcaacgagaaaccgatcactcagaacaccccttgac 532  Q
    |||||||| ||    | |||||| | ||||||||    || ||||| ||||||||||| ||||||||||| | ||   |||||||| |||| ||||||||    
T  41366534 caaaagtagtc----acaagaaagctaggaagaatgatgatctagtagatgttcttctcaagattcaacgtgtaa---atcactcacaacatcccttgac 41366626  T
Q  533 tgatgacagtataaaagcagtcattcaggttagtctacaa 572  Q
     || |||| ||||||| | ||||| |||||||||| ||||    
T  41366627 cgacgacaatataaaatcggtcatccaggttagtcaacaa 41366666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 306 - 572
Target Start/End: Original strand, 41316243 - 41316509
Alignment:
Q  306 ttgggaggattttgcattgctgatttgtatccttctattaaaatagttcaaagggtgagtagggcaaagaccaaaatggaaaaacttcagagagaggctg 405  Q
    ||||||||  |||| ||||  ||||||| ||||||||||||| |  ||||| |  ||||||| || ||||||||||||||||||||||| | ||||  ||    
T  41316243 ttgggaggcgtttgtattgtggatttgtttccttctattaaattgcttcaatgcttgagtagagcgaagaccaaaatggaaaaacttcacaaagagcttg 41316342  T
Q  406 atatgatattgcaagatatcatcaatgatcacaaaagtaatcatagagaagaaatcaaggaagaagacctagttgatgttcttctaaagattcaacgaga 505  Q
    |||||| ||||||||| |||||| | ||||||||||| | ||| |  ||||||| ||| || ||||| ||||| ||||||||||| ||||||||||  ||    
T  41316343 atatgacattgcaagacatcatcgacgatcacaaaagcattcacaaggaagaaagcaatgatgaagatctagtagatgttcttctcaagattcaacagga 41316442  T
Q  506 aaccgatcactcagaacaccccttgactgatgacagtataaaagcagtcattcaggttagtctacaa 572  Q
    ||   |||||||| |||| || || |||||||||| ||||||| || |||| |||||||||| ||||    
T  41316443 aaattatcactcacaacatcctttaactgatgacaatataaaatcaatcatccaggttagtccacaa 41316509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 307 - 572
Target Start/End: Complemental strand, 31188647 - 31188382
Alignment:
Q  307 tgggaggattttgcattgctgatttgtatccttctattaaaatagttcaaagggtgagtagggcaaagaccaaaatggaaaaacttcagagagaggctga 406  Q
    |||||| |||||| ||||||||| ||||||||||| |||||||  ||||| ||||||||||||| ||||| ||| | ||||| ||||| | ||||  |||    
T  31188647 tgggagaattttgtattgctgatgtgtatccttctgttaaaatgtttcaatgggtgagtagggcgaagacgaaagttgaaaagcttcataaagagattga 31188548  T
Q  407 tatgatattgcaagatatcatcaatgatcacaaaagtaatcatagagaagaaatcaaggaagaagacctagttgatgttcttctaaagattcaacgagaa 506  Q
    ||||||||||||||||||||||  |||||| ||||  | ||| |  ||||||| |||||| ||||| |||||||||  |||||| ||||||||||  |||    
T  31188547 tatgatattgcaagatatcatcgttgatcataaaaacattcacaaggaagaaagcaaggatgaagatctagttgatactcttctcaagattcaacaggaa 31188448  T
Q  507 accgatcactcagaacaccccttgactgatgacagtataaaagcagtcattcaggttagtctacaa 572  Q
    |  ||||||||| |  | || || |||||| ||| ||| |||||| |||||| |||| ||||||||    
T  31188447 aatgatcactcacataatccattaactgataacaatatgaaagcaatcattctggttcgtctacaa 31188382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 30 - 143
Target Start/End: Complemental strand, 28801415 - 28801300
Alignment:
Q  30 cctatttgcgtgtgagaattttcagattg--cccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcga 127  Q
    |||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||||    
T  28801415 cctatttgcgtgtgagaattttcatatttttcccaaatttttctttttgtaagtgtgttaatgggcttttggtttggatctaatgtgcaaaaattatcga 28801316  T
Q  128 tcgagcccgggcgacc 143  Q
    ||||||| ||||||||    
T  28801315 tcgagccagggcgacc 28801300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 307 - 501
Target Start/End: Original strand, 31225166 - 31225360
Alignment:
Q  307 tgggaggattttgcattgctgatttgtatccttctattaaaatagttcaaagggtgagtagggcaaagaccaaaatggaaaaacttcagagagaggctga 406  Q
    ||||||||||||| |||| |||| ||||||||||||| |||||  ||||| ||||||||||||| ||||||||| | ||||| ||||| | ||||  |||    
T  31225166 tgggaggattttgtattgttgatgtgtatccttctataaaaatgcttcaatgggtgagtagggcgaagaccaaagttgaaaagcttcataaagagattga 31225265  T
Q  407 tatgatattgcaagatatcatcaatgatcacaaaagtaatcatagagaagaaatcaaggaagaagacctagttgatgttcttctaaagattcaac 501  Q
    |||||||||||||||||||||| ||||||| ||||  | ||| |  ||||||| |||||| ||||| |||||||||  |||||| ||||| ||||    
T  31225266 tatgatattgcaagatatcatcgatgatcataaaaacattcacaaggaagaaagcaaggatgaagatctagttgatactcttctcaagatacaac 31225360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 304 - 569
Target Start/End: Original strand, 41332221 - 41332486
Alignment:
Q  304 tattgggaggattttgcattgctgatttgtatccttctattaaaatagttcaaagggtgagtagggcaaagaccaaaatggaaaaacttcagagagaggc 403  Q
    |||| |||||||||   ||||| |||||||||||||||||||||||  ||||| |  |||||||||  |||||||||||||||||| |||| ||||||      
T  41332221 tattaggaggatttgaaattgcagatttgtatccttctattaaaatgcttcaatgcatgagtagggagaagaccaaaatggaaaaaattcatagagagct 41332320  T
Q  404 tgatatgatattgcaagatatcatcaatgatcacaaaagtaatcatagagaagaaatcaaggaagaagacctagttgatgttcttctaaagattcaacga 503  Q
    |||||||||| ||||||| |||||| | ||||||| ||| | ||| |  |||| || ||| || ||||| ||||| ||||||||||| ||||||||||      
T  41332321 tgatatgataatgcaagacatcatcgacgatcacagaagcattcacaaggaagcaagcaacgatgaagatctagtagatgttcttctcaagattcaacag 41332420  T
Q  504 gaaaccgatcactcagaacaccccttgactgatgacagtataaaagcagtcattcaggttagtcta 569  Q
    ||||   || |||||||||| || || || ||||||| ||| ||| || |||| ||||||||||||    
T  41332421 gaaaattattactcagaacatcctttaaccgatgacaatatgaaatcaatcatccaggttagtcta 41332486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 321 - 569
Target Start/End: Original strand, 41328225 - 41328473
Alignment:
Q  321 attgctgatttgtatccttctattaaaatagttcaaagggtgagtagggcaaagaccaaaatggaaaaacttcagagagaggctgatatgatattgcaag 420  Q
    ||||| ||||||||||||||||||||| |  ||||| || ||| |||||  ||||||||||||||||||||||| | ||||  ||||||||||   ||||    
T  41328225 attgcagatttgtatccttctattaaattgcttcaatggatgactagggagaagaccaaaatggaaaaacttcatacagagattgatatgatagcacaag 41328324  T
Q  421 atatcatcaatgatcacaaaagtaatcatagagaagaaatcaaggaagaagacctagttgatgttcttctaaagattcaacgagaaaccgatcactcaga 520  Q
    | |||||| | ||||||| ||||| ||| |  |||| || ||| || ||||| ||||| ||||||||||| ||||||||||  ||||   ||||||||||    
T  41328325 acatcatcgacgatcacagaagtattcacaaggaagcaagcaatgatgaagatctagtagatgttcttctcaagattcaacaggaaaattatcactcaga 41328424  T
Q  521 acaccccttgactgatgacagtataaaagcagtcattcaggttagtcta 569  Q
    ||| || || || ||||||| ||| ||| || |||| ||||||||||||    
T  41328425 acatcctttaaccgatgacaatatgaaatcaatcatccaggttagtcta 41328473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 307 - 501
Target Start/End: Complemental strand, 31178602 - 31178408
Alignment:
Q  307 tgggaggattttgcattgctgatttgtatccttctattaaaatagttcaaagggtgagtagggcaaagaccaaaatggaaaaacttcagagagaggctga 406  Q
    ||||||||||||| ||||||||| |||||||||||||||||||  ||||| |||||||| |||  ||||||||| | |||||  |||| | ||||  |||    
T  31178602 tgggaggattttgtattgctgatgtgtatccttctattaaaatgcttcaacgggtgagtggggtgaagaccaaatttgaaaagtttcataaagagattga 31178503  T
Q  407 tatgatattgcaagatatcatcaatgatcacaaaagtaatcatagagaagaaatcaaggaagaagacctagttgatgttcttctaaagattcaac 501  Q
    ||||||||||||||||||| || ||||||| ||||  | ||| |  ||||||| |||||| ||||| ||||||||||  ||| | ||||||||||    
T  31178502 tatgatattgcaagatatcgtcgatgatcataaaaacattcacaaggaagaaagcaaggatgaagatctagttgatgcacttatcaagattcaac 31178408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 361 - 575
Target Start/End: Original strand, 41310558 - 41310772
Alignment:
Q  361 tgagtagggcaaagaccaaaatggaaaaacttcagagagaggctgatatgatattgcaagatatcatcaatgatcacaaaagtaatcatagagaagaaat 460  Q
    |||||||||| ||| |||||||||||||| |||| | ||||  | |||||||||||||||| |||||| | ||||||||||| | ||  |  ||||| |     
T  41310558 tgagtagggcgaaggccaaaatggaaaaagttcacaaagagatttatatgatattgcaagacatcatcgacgatcacaaaagcattcgcaaggaagatag 41310657  T
Q  461 caaggaagaagacctagttgatgttcttctaaagattcaacgagaaaccgatcactcagaacaccccttgactgatgacagtataaaagcagtcattcag 560  Q
    ||| || ||||| ||||| ||||||||||| |||||| |||  ||||   ||||||||||||| || || || ||||||| ||| ||| || |||| |||    
T  41310658 caatgatgaagatctagtagatgttcttctcaagattaaacaggaaaattatcactcagaacatcctttaacggatgacaatatgaaatcaatcatccag 41310757  T
Q  561 gttagtctacaataa 575  Q
    || ||||||||||||    
T  41310758 gtaagtctacaataa 41310772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 453 - 572
Target Start/End: Original strand, 41286399 - 41286518
Alignment:
Q  453 gaagaaatcaaggaagaagacctagttgatgttcttctaaagattcaacgagaaaccgatcactcagaacaccccttgactgatgacagtataaaagcag 552  Q
    ||||||| ||| || ||||| ||| ||||||||||||| ||||||||||  ||||  || |||||| |||| |||||||||||||| | | |||||||||    
T  41286399 gaagaaagcaaagatgaagatctaattgatgttcttctcaagattcaacaggaaagtgagcactcataacatcccttgactgatgataatttaaaagcag 41286498  T
Q  553 tcattcaggttagtctacaa 572  Q
    |||| |||||||||||||||    
T  41286499 tcatccaggttagtctacaa 41286518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 71 - 173
Target Start/End: Complemental strand, 202724 - 202622
Alignment:
Q  71 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 170  Q
    ||||||| ||||| ||||| ||||||||||||    ||||||| || |||||||||||||||||||||||||| ||  |||||| ||| |||||||||||    
T  202724 tttttgttagtgtcttaatgggcttttgggttcgacctaatgtacacaaattatcgatcgagcccgggcgaccacctagggtcgtcgggcggtgaaaccg 202625  T
Q  171 ccc 173  Q
    |||    
T  202624 ccc 202622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 26543902 - 26543949
Alignment:
Q  126 gatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||    
T  26543902 gatcgagcccgggcgaccgcccggggtcgccgggcggtaaaaccgccc 26543949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 41286280 - 41286320
Alignment:
Q  307 tgggaggattttgcattgctgatttgtatccttctattaaa 347  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  41286280 tgggaggattttgcattgttgatttgtatccttctattaaa 41286320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 172; Significance: 4e-92; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 43143596 - 43143771
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43143596 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 43143695  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43143696 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgtcggacggtgaaaccgcccatg 43143771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 42333788 - 42333963
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42333788 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 42333887  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||| |||| |||||||||||||| |||||    
T  42333888 ttgagtctaatgtgcaaaaattatcgattgagcccggacgaccgcccgggatcgctggacggtgaaaccgtccatg 42333963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 3292908 - 3293080
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3292908 tcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 3293007  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| |||||||| |||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||    
T  3293008 ttgggtctaatgggcaaaaattatcgatcgagcccgggcgaccgcccggggtcactgggcggtgaaaccgccc 3293080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 6690247 - 6690419
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6690247 tcaatagtgtgctaaataaaatttcgagacctatttgcgtgtgagaattttcagtttgcccaaatttttctttttgtaagtgtgttaattggcttttggg 6690346  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6690347 ttgggtctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 6690419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 30216754 - 30216926
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30216754 tcaatagtgtgctaaataaaattccgagatctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattagcttttggg 30216853  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30216854 ttgggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaatccgccc 30216926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 50205089 - 50205261
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  50205089 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgtccaattttttctttttgtaagtgtgttaattggcttttggg 50205188  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||  |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  50205189 ttggatctaatgtgcaaaaattatcgatcgagctcgggcgaccgcccgggatcgccggacggtgaaaccgccc 50205261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 10352902 - 10353068
Alignment:
Q  7 gtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 106  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| | ||||| ||||| ||    
T  10352902 gtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgcccaaatttttccttttgtaaatgtgttaatggactttttggttgggt 10353001  T
Q  107 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  10353002 ctaatgtgcaaaaattatcgattgagcccgggcgaccgccaggggtcgccggacggtgaaaccgccc 10353068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 20129465 - 20129290
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||| |||||||||||  |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  20129465 tcaatagtgtgccaaataaaattctaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 20129366  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||    
T  20129365 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 20129290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 25930863 - 25930688
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  25930863 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 25930764  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||  |||||  |||||||||||    
T  25930763 ttgagtttaatgtgcaaaaattatagatcgagcccgggcgaccgcccagggtcgccatacggtagaaccgcccatg 25930688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 28877262 - 28877434
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||| ||||||||| |||||| ||    
T  28877262 tcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaatttttagatttcccaaatttttctttttataagcgtgttaattagcttttagg 28877361  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||| |||||||||||||||||||||||| |||||  |||||||| |||||||  ||||||||||||||||||    
T  28877362 ttgaatctaatgtgcaaaaattatcgatctagcccaagcgaccgcacggggtcatcggacggtgaaaccgccc 28877434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 48989483 - 48989311
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |    
T  48989483 tcaatagtgtgctaaataaaattccgagacctatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatggacttttgag 48989384  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| || |||||||||||||||||||||||| |||||  |||||||||| |||| ||| ||||||||| ||||    
T  48989383 ttgggtttaatgtgcaaaaattatcgatcgaacccggttgaccgcccggagtcgtcgggcggtgaaactgccc 48989311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 26439291 - 26439466
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||  |||||||||| | |||||||||| ||||||| |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  26439291 tcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttggg 26439390  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||| |||||||||||    
T  26439391 ttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 26439466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 34407296 - 34407471
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||  |||||||||| | |||||||||| ||||||| |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  34407296 tcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttggg 34407395  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||| |||||||||||    
T  34407396 ttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 34407471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 47500928 - 47500751
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||| |||||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||||||  ||| |||||||||  |||||| ||    
T  47500928 tcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttcttttcataaatgtgttaatgagctttttgg 47500829  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatgtt 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||    
T  47500828 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatgtt 47500751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 13012343 - 13012168
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||| |||||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||||||| ||| |||||||||  |||||| ||    
T  13012343 tcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttgg 13012244  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||    
T  13012243 ttgaatctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 13012168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 44156806 - 44156668
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  44156806 tcaatagtgtgctaaataaaattccgagacctatttgcgtgagagaattttcagattgtccaaaattttctttttgtaagtgtgttaattggcttttggg 44156707  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggc 139  Q
    ||| |||||||||||||||||||||| | ||||||||||    
T  44156706 ttgggtctaatgtgcaaaaattatcggttgagcccgggc 44156668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 29319717 - 29319892
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||| |||||| |||||| |||||||||||||| ||||||||||||||||||| ||||||||| || |||||||    
T  29319717 tcaatagtgtgctaaataaaattccaagacttatttgtgtgtgacaattttcagattgctcaaatttttctttttgtaaatgtgttaatgggattttggg 29319816  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||||||||||||||||||||||| || |||||||| |||||| ||  |||||  |||||||||||    
T  29319817 ttgagtctaatgtgcaaaaattatcgatcgagcctggacgaccgccaggggtcaccatacggtagaaccgcccatg 29319892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 36382358 - 36382512
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| |||| ||||||||| | ||||| ||    
T  36382358 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgtccaaatttttctttt-gtaaatgtgttaatggactttttgg 36382456  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 156  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36382457 ttgagtttaatgtgcaaaaattatggatcgagcccgggcgaccgcccggggtcgcc 36382512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 43356059 - 43355884
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||  |||||||||| | |||||||||| ||||||| |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  43356059 tcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttggg 43355960  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||   |||||| |||||||||||    
T  43355959 ttgagtctaatgtgcaaaaattatcgaccgagcccgggcgactgcctggggtcgctacacggtggaaccgcccatg 43355884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 29995995 - 29996167
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||| ||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||| ||||||||| | ||||| ||    
T  29995995 tcaatagtgtgcttaataaaattccgagaactatttgcgtgcaagaattttcagattgcccaaatttttcttttcgtaaatgtgttaatggactttttgg 29996094  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||||||||||||| |||||||||||||||||| |||| |||||| ||||| ||| ||| ||||||||||||||    
T  29996095 ttgagtctaatgtacaaaaattatcgatcgagtccggacgaccgtccgggatcgtcgggcggtgaaaccgccc 29996167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 17511252 - 17511391
Alignment:
Q  8 tgtgctaaataaaatt-ccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 106  Q
    |||||||||||||||| || |||||||||||||||| | |||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  17511252 tgtgctaaataaaatttccaagacctatttgcgtgtaacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagt 17511351  T
Q  107 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcc 146  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  17511352 ctaatgtgcaaaaattatcgatcgagtctgggcgaccgcc 17511391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 26448206 - 26448036
Alignment:
Q  2 caattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggt 101  Q
    |||| ||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  26448206 caatagtgtgctaaataaaattccgaaacctatttgtgtatgagaattttcagattgcccaaattttt-tttttgtaagtgtgttaatggacttttgggt 26448108  T
Q  102 tgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |   | ||||||||||||||||||||||||| |||| ||| ||| ||| |||||||| ||||||||||||||    
T  26448107 tagatttaatgtgcaaaaattatcgatcgagtccggacgatcgcacggagtcgccgggcggtgaaaccgccc 26448036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 35546108 - 35545977
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35546108 tcaatagtgtgctaaataaaattcagagacccatttgcgtgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaattggcttttggg 35546009  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgag 132  Q
    ||| |||| ||| ||||||||| |||||||||    
T  35546008 ttgggtctgatgcgcaaaaattgtcgatcgag 35545977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 7 - 178
Target Start/End: Original strand, 30077649 - 30077819
Alignment:
Q  7 gtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 106  Q
    ||||||||||||||||| | ||||||||||| |||| | ||||||||||||| |||||||||||||||||||| |||||||||   ||||| ||||| ||    
T  30077649 gtgtgctaaataaaatttcaagacctatttgtgtgtaaaaattttcagattgtccaaatttttctttttgtaaatgtgttaatgaactttttggttgggt 30077748  T
Q  107 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatgtt 178  Q
    ||||||||||||| |||||||| ||||| ||||||||||||| ||||| ||| |||||||||||||| ||||    
T  30077749 ctaatgtgcaaaatttatcgattgagcctgggcgaccgcccgaggtcg-cgggcggtgaaaccgcccctgtt 30077819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 40529170 - 40528996
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||||| ||||| |||||||| |||| |||||||||||||||||||| |||||||||  | |||| ||    
T  40529170 tcaatagtgtgctaaataaaattccaagacctatttgcatgtgacaattttcaaattgtccaaatttttctttttgtaaatgtgttaatgagtttttagg 40529071  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgac--cgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||||| ||||||||||||||||||||||||| |||| ||||  ||||| ||||||||  |||||  ||||||||    
T  40529070 ttgagtttaatgtgcaaaaattatcgatcgagtccggacgacctcgcccagggtcgccatacggtagaaccgccc 40528996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 30110084 - 30109945
Alignment:
Q  30 cctatttgcgtgtgagaattttcagatt--gcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcga 127  Q
    ||||||||||||||||| |||||| |||  | |||||||||||||||||||||||||||||| | |||| || ||| |||||||||||||||||||||||    
T  30110084 cctatttgcgtgtgagatttttcatattttgtccaaatttttctttttgtaagtgtgttaatggtctttgggtttgggtctaatgtgcaaaaattatcga 30109985  T
Q  128 tcgagcccgggcgaccgcccggggtcgccggacggtgaaa 167  Q
    ||||| ||||||||||| ||||||||| ||| ||||||||    
T  30109984 tcgagtccgggcgaccgtccggggtcgtcgggcggtgaaa 30109945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 272 - 577
Target Start/End: Complemental strand, 17249370 - 17249065
Alignment:
Q  272 gttcaaatcagcaatggaggaatcaataaagttattgggaggattttgcattgctgatttgtatccttctattaaaatagttcaaagggtgagtagggca 371  Q
    ||||||||||||||| ||||||  | | |  || |||||||||||||| |||| |||||||||||||||||| |||||| || ||||||| |||  ||      
T  17249370 gttcaaatcagcaatagaggaaatagtgagtttgttgggaggattttgtattgttgatttgtatccttctatcaaaatacttaaaagggtaagtcaggtg 17249271  T
Q  372 aagaccaaaatggaaaaacttcagagagaggctgatatgatattgcaagatatcatcaatgatcacaaaagtaatcatagagaagaaatcaaggaagaag 471  Q
    || |||||||||||||||||||| || ||   ||||||||||||||||||||||||  ||||||||| || |   || |   ||| |  |||||| ||||    
T  17249270 aaaaccaaaatggaaaaacttcatagggaaattgatatgatattgcaagatatcatagatgatcacagaaatggacaaaacaaagcacgcaaggatgaag 17249171  T
Q  472 acctagttgatgttcttctaaagattcaacgagaaaccgatcactcagaacaccccttgactgatgacagtataaaagcagtcattcaggttagtctaca 571  Q
    | |||||||||| |||| | |||||||||| |||||  ||| || || || |  | ||||||||||||| ||||||| || |||| ||||||||||||||    
T  17249170 atctagttgatgctcttatcaagattcaacaagaaagtgattacccacaaaattcattgactgatgacaatataaaatcaatcatccaggttagtctaca 17249071  T
Q  572 ataaaa 577  Q
    | ||||    
T  17249070 agaaaa 17249065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 30 - 176
Target Start/End: Complemental strand, 48130087 - 48129950
Alignment:
Q  30 cctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatc 129  Q
    ||||||||||||||||| ||||||     |||||||||||||||||||||||||||||||  |||||||||||| ||||||| |||||||||||||||||    
T  48130087 cctatttgcgtgtgagagttttca-----cccaaatttttctttttgtaagtgtgttaatgagcttttgggttgggtctaatatgcaaaaattatcgatc 48129993  T
Q  130 gagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||| ||||||     ||||||||| |||| ||||||||||||    
T  48129992 gagcccggtcgaccga----ggtcgccgggcggttaaaccgcccatg 48129950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6235675 - 6235575
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||| | ||||||||    
T  6235675 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatggacttttggg 6235576  T
Q  101 t 101  Q
    |    
T  6235575 t 6235575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 1817871 - 1817752
Alignment:
Q  2 caattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggt 101  Q
    |||| ||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| ||| ||||| | ||||||| |    
T  1817871 caatagtgtgttaaataaaattccgagacctatttgcgtgtaagaatttttagattgcccaaatttttctttttataaatgtattaatggacttttggat 1817772  T
Q  102 tgagtctaatgtgcaaaaat 121  Q
    ||  ||||||||||||||||    
T  1817771 tggatctaatgtgcaaaaat 1817752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13392893 - 13392970
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgta 78  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13392893 tcaatagtgtgctaaataaaatttcgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgta 13392970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13396032 - 13396109
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgta 78  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13396032 tcaatagtgtgctaaataaaatttcgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgta 13396109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 45194276 - 45194159
Alignment:
Q  56 ttgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 155  Q
    ||||||||  |||| ||||||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||| |||||| | |||| |||||||     
T  45194276 ttgcccaatattttttttttgtaagtgtgttaatggacttttgggttgagtttaatgtgcaaaaattattgatcgagtccgggcaatcgcctggggtcgt 45194177  T
Q  156 cggacggtgaaaccgccc 173  Q
    ||| ||||||||| ||||    
T  45194176 cgggcggtgaaactgccc 45194159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 71 - 173
Target Start/End: Complemental strand, 27363446 - 27363344
Alignment:
Q  71 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 170  Q
    ||||||||||||||||||| ||||||||||||| | ||||| ||||||||   ||||||||||||||||||||||||| |||||||  ||||| ||||||    
T  27363446 tttttgtaagtgtgttaatgggcttttgggttgggcctaatatgcaaaaaaattcgatcgagcccgggcgaccgcccgaggtcgccatacggtaaaaccg 27363347  T
Q  171 ccc 173  Q
    |||    
T  27363346 ccc 27363344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 7769369 - 7769308
Alignment:
Q  115 caaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7769369 caaaaattatcgatcgagcccgggcgaccgcctggggtcgccggacggtgaaaccgcccatg 7769308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 49908782 - 49908836
Alignment:
Q  119 aattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  49908782 aattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 49908836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 6254637 - 6254569
Alignment:
Q  63 aatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcga 131  Q
    ||||||| |||||| |||||||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  6254637 aatttttttttttgcaagtgtgttaattgtcttttgggttgggtttaatgtgcaaaaattatcgatcga 6254569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 5517494 - 5517548
Alignment:
Q  119 aattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  5517494 aattatcgatcgagcccaggcgaccgcccggggtcgccgggcggtgaaaccgccc 5517548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 6212029 - 6212082
Alignment:
Q  120 attatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  6212029 attatcgatcgagctcgggcgaccgcccgaggtcgccggacggtgaaaccgccc 6212082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 17555032 - 17554979
Alignment:
Q  120 attatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  17555032 attatcgatcgagcccgggcgaccacccggggtcgtcggacggtgaaaccgccc 17554979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 13392989 - 13393054
Alignment:
Q  108 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||| ||||||| | |||||| ||||||||||||||| |||||||||| || ||||||||||||||    
T  13392989 taatatgcaaaagtcatcgattgagcccgggcgaccgtccggggtcgctgggcggtgaaaccgccc 13393054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 13396128 - 13396193
Alignment:
Q  108 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||| ||||||| | |||||| ||||||||||||||| |||||||||| || ||||||||||||||    
T  13396128 taatatgcaaaagtcatcgattgagcccgggcgaccgtccggggtcgctgggcggtgaaaccgccc 13396193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 20113876 - 20113775
Alignment:
Q  71 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 170  Q
    ||||| ||||||||||||| ||||||||||||||  |||||||  | ||||||||||| |||  |||||||  | ||||||||||| | ||||| |||||    
T  20113876 tttttttaagtgtgttaatcggcttttgggttgaacctaatgtaaagaaattatcgattgagttcgggcgagtgtccggggtcgccaggcggtggaaccg 20113777  T
Q  171 cc 172  Q
    ||    
T  20113776 cc 20113775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 50720476 - 50720529
Alignment:
Q  119 aattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcc 172  Q
    |||||| ||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  50720476 aattattgattgagcccgggcgaccgcccgaggtcgccgggcggtgaaaccgcc 50720529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 12680193 - 12680251
Alignment:
Q  120 attatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatgtt 178  Q
    |||||||||||||||||||| |||||| ||||| || || |||||||||||||| ||||    
T  12680193 attatcgatcgagcccgggccaccgcctggggttgctgggcggtgaaaccgcccctgtt 12680251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 164; Significance: 2e-87; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 11018224 - 11018399
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11018224 tcaattgtgtgctaaataaaattctgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 11018323  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  11018324 ttgagtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcccggagtcgccggacggtgaaaccgcccatg 11018399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 45183136 - 45182964
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45183136 tcaatagtgtgctaaataaaattccgagacctatttgtgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 45183037  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45183036 ttgggtctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 45182964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 6503581 - 6503756
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  6503581 tcaattgtgtgctaaataaaaatccgagacctatttgcctgtgagaattttcagattgcttaaatttttctttttgtaagtgtgctaattggcttttggg 6503680  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6503681 ttgagtctaatttgcaaaaataatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 6503756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 6930906 - 6931078
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  6930906 tcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcctaaatttttctttttgtaaatgtgttaattggcttttggg 6931005  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||  ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  6931006 ttggatctaatgcgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgccgggcggtgaaaccgccc 6931078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 33041108 - 33040936
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||| |||||||||    
T  33041108 tcaatagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttcaaattgttcaaatttttctttttgtaagtgtgttaattagcttttggg 33041009  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| ||||||| ||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  33041008 ttgggtctaatatgcaaaaattatcaatcgagcccgagcgaccgcccggggtcgccgggcggtgaaaccgccc 33040936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 6269438 - 6269613
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  6269438 tcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 6269537  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||| ||||   |||||  |||||||||||    
T  6269538 ttgagtctaatgtgcaaaaattatcgatcgagtccggacgaccgcccgggatcgctacacggtagaaccgcccatg 6269613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 27935333 - 27935158
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| || ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  27935333 tcaatagtatgctaaataaaattccgagacctattttcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatgagcttttggg 27935234  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    ||| || ||||||||||||||||||||||||||||||||||| |||| |||| ||| | |||||||||| ||||||    
T  27935233 ttgggtttaatgtgcaaaaattatcgatcgagcccgggcgactgcccagggttgccaggcggtgaaaccacccatg 27935158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 19565519 - 19565685
Alignment:
Q  7 gtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 106  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||| |  |||| ||||| ||    
T  19565519 gtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgtccaaatttttctttttgtaaatgtgttaatggattttttggttgggt 19565618  T
Q  107 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||||||||||||||||||||| || |||||||||||||||||| ||||||| ||||||||||||||    
T  19565619 ctaatgtgcaaaaattatcgattgaacccgggcgaccgcccgggatcgccgggcggtgaaaccgccc 19565685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 19390301 - 19390146
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| ||    
T  19390301 tcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatagacttttagg 19390202  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 156  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  19390201 ttgagtctaatgtgcaaaaattatcgatcgaacccggacgaccgcccggggtcgcc 19390146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 22968456 - 22968631
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||| | |||||||||| ||||||| |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  22968456 tcaatagtgtgctaaataaaatttcaagacctatttacgtgtgacaatttttagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 22968555  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    || |||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||  |||||||||||    
T  22968556 ttaagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgctacacggtagaaccgcccatg 22968631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 39771945 - 39771770
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||  |||||||||| | |||||||||| ||||||| |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  39771945 tcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttggg 39771846  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||| |||||||||||    
T  39771845 ttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 39771770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 34084134 - 34084289
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||| | ||||| ||    
T  34084134 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgataattttcatattgcccaaatttttctttttgtaaatgtgttaatggactttttgg 34084233  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 156  Q
    |||| | ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34084234 ttgaatttaatgtgcaaaaattatcgatcgagtccgggcgaccgcccggggtcgcc 34084289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 7 - 173
Target Start/End: Complemental strand, 45336023 - 45335858
Alignment:
Q  7 gtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 106  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||| || ||||| ||||| ||    
T  45336023 gtgtgctaaataaaattccaagacctatttgcgtgtaagaattttcagattgcccagatttttctttttgtaaatgtgttaa-tgactttttggttgggt 45335925  T
Q  107 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||||||| ||||||||||||| ||| ||||||||||||||| ||||||||| ||||||||||||||    
T  45335924 ctaatgtgtaaaaattatcgattgagtccgggcgaccgcccgaggtcgccgggcggtgaaaccgccc 45335858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 35514417 - 35514249
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||| |||||||||||| ||||||||||||| ||||||||||||| |||| ||||||||||||||||    |||||||||| | ||||||||    
T  35514417 tcaatagtgtgcaaaataaaattcctagacctatttgcgagtgagaattttcatattgtccaaatttttcttttt----gtgtgttaatggacttttggg 35514322  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||  |||| | ||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||||| ||||    
T  35514321 ttggatctagtatgcgaaaattatcgatcgagcccggacgaccgtccggggtcgccgggcggtgaaactgccc 35514249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 40081753 - 40081893
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||| ||||| || ||| |||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||  |||||| ||    
T  40081753 tcaatagtgtgctaaaaaaaat-ccaagatctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatgagctttt-gg 40081850  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgacc 143  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  40081851 ttgagtctaatgttcaaaaattatcgatcgagcccgggcgacc 40081893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 30 - 134
Target Start/End: Complemental strand, 5135397 - 5135291
Alignment:
Q  30 cctatttgcgtgtgagaattttcagatt--gcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcga 127  Q
    |||||||| |||||||||||||| ||||  | ||||||||||||||||||||||||||||||  |||||| ||||| ||||||||| ||||||| |||||    
T  5135397 cctatttgtgtgtgagaattttcggattttgtccaaatttttctttttgtaagtgtgttaatgagcttttaggttgggtctaatgtacaaaaataatcga 5135298  T
Q  128 tcgagcc 134  Q
    |||||||    
T  5135297 tcgagcc 5135291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 6891035 - 6890981
Alignment:
Q  119 aattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  6891035 aattatcgatcgagcccgggcgaccgcccggtgtcgccgggcggtgaaaccgccc 6890981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 5354809 - 5354692
Alignment:
Q  56 ttgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 155  Q
    |||||||| ||||| |||||  |||||||| ||| ||| | | |||||   ||||||||  |||||||  ||||||||||||||||||||||||||||||    
T  5354809 ttgcccaatttttttttttttgaagtgtgtaaatgggcctataggttggacctaatgtgagaaaattaaggatcgagcccgggcgaccgcccggggtcgc 5354710  T
Q  156 cggacggtgaaaccgccc 173  Q
    ||| ||||||||| ||||    
T  5354709 cgggcggtgaaactgccc 5354692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 22922214 - 22922141
Alignment:
Q  99 ggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcc 172  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||||||||| |||||  |||||| |||||||    
T  22922214 ggttgagtttaatgtgcaaaaatgatcgatcgagcccgagcgaccgcccgggatcgccatacggtggaaccgcc 22922141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 156; Significance: 1e-82; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 34136837 - 34137012
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34136837 tcaattgtgtgctaaataaaatttcgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttggg 34136936  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||    
T  34136937 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgctcggggtcgccagacggtgaaaccacccatg 34137012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 4404163 - 4403988
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4404163 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgtaagtatgttaattggcttttggg 4404064  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||    
T  4404063 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcctggggtcgccggccagtgaaaccgtccatg 4403988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 23402263 - 23402091
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23402263 tcaatagtgtgttaaataaaatttcgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 23402164  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23402163 ttgggtctaatatgcaaagattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 23402091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 16788037 - 16788194
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16788037 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgagagttttaagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 16788136  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgg 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16788137 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggttgccgg 16788194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 29728398 - 29728570
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||  |||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  29728398 tcaatagtgtgctaaataaaattcgaagacctatttgcgtgtcacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgagcttttggg 29728497  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||  |||||  ||||||||    
T  29728498 ttgagtctaatgtgcaaaatttatcgatcgagcacgggcgaccgtccggggtcgccatacggtagaaccgccc 29728570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 15838440 - 15838286
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| | ||||| ||    
T  15838440 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgaaaattttcagattgcccaaatttttc-ttttgtaaatgtgttaatggactttttgg 15838342  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 156  Q
    |||||| |||||||||||||||||| |||||||||||| |||||||||||||||||    
T  15838341 ttgagtttaatgtgcaaaaattatcaatcgagcccgggtgaccgcccggggtcgcc 15838286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 36408705 - 36408538
Alignment:
Q  2 caattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggt 101  Q
    |||| ||||| |||||||||||| |||||||||| |||||| |||||||||| |||||| ||| |||||||||||||| ||||||||| | |||||||||    
T  36408705 caatagtgtgttaaataaaattctgagacctattagcgtgtaagaattttcaaattgccaaaaattttctttttgtaaatgtgttaatggacttttgggt 36408606  T
Q  102 tgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaacc 169  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  36408605 tggatctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgccgggcggtgaaacc 36408538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 3648806 - 3648947
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| | ||||| |||||||||| ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  3648806 tcaatagtgtgctaaataaaattccaaaacctacttgcgtgtgacaattttcagattgcccaaaattttctttttgtaaatgtgttaatgggcttttggg 3648905  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgac 142  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  3648906 ttgagtctaatgtgaaaaaattatcgatcgagcccgggcgac 3648947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 9877374 - 9877242
Alignment:
Q  2 caattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggt 101  Q
    |||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9877374 caatagtgtgctaaataaaatttcgagacctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggt 9877275  T
Q  102 tgagtctaatgtgcaaaaattatcgatcgagcc 134  Q
    |  ||||||||||||||||||||| ||||||||    
T  9877274 taggtctaatgtgcaaaaattatcaatcgagcc 9877242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 2729208 - 2729380
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||  ||||||||||||||| ||||| |||||| |||||| |||  ||||||||| ||||||||||||| |||||||||     
T  2729208 tcaatagtgtgctaaataaaattttgagacctatttgcgtatgagagttttcaaattgccaaaaaatttctttttataagtgtgttaatgggcttttgga 2729307  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||  | ||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  2729308 ttggatttaatgtgtaaaaattatcgatcgagcccgggcgtccgcccggggtcgccgggcggtgaaaccgccc 2729380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 39914669 - 39914495
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||| |||||||||||| |||||||||| | ||||| |||||||| ||||||||||||||| ||||| ||| |||||||||  |||||| ||    
T  39914669 tcaatagtgtgccaaataaaattccaagacctatttacttgtgacaattttcaaattgcccaaattttt-tttttataaatgtgttaatgagctttttgg 39914571  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| ||||| |||||    
T  39914570 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgtccatg 39914495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 3435397 - 3435285
Alignment:
Q  30 cctatttgcgtgtgagaattttcagatt--gcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcga 127  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||    
T  3435397 cctatttgcgtttgagaattttcagattttgcccaaatttttctttttgtaagtgtgttaatgggtttttgggttgggtctaatgtgcaaaaattatcga 3435298  T
Q  128 tcgagcccgggcg 140  Q
    || ||||||||||    
T  3435297 tcaagcccgggcg 3435285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 42231092 - 42230971
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||| ||||||||||||| | |||||||||||| |||||||||||||||||||||||||  |||||||| | |||||| |    
T  42231092 tcaatagtgtgctaaataaaattctgagacctatttgcatatgagaattttcaaattgcccaaatttttctttttgtaa--gtgttaatggacttttgag 42230995  T
Q  101 ttgagtctaatgtgcaaaaattat 124  Q
    |||  | |||||||||||||||||    
T  42230994 ttggatttaatgtgcaaaaattat 42230971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 10397122 - 10397220
Alignment:
Q  71 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaacc 169  Q
    ||||| ||| ||||||||| ||||||||||||||  |||||||| | ||||||||||| ||||||||||||  |||||| |||||||| ||||| ||||    
T  10397122 tttttttaactgtgttaatcggcttttgggttgaacctaatgtgaagaaattatcgattgagcccgggcgagtgcccggagtcgccgggcggtgtaacc 10397220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 40470567 - 40470637
Alignment:
Q  63 aatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagc 133  Q
    ||||||| ||||| ||||||||||||| | ||||||  ||| |||||||||||||||||||||||||||||    
T  40470567 aatttttttttttataagtgtgttaatggacttttgatttgggtctaatgtgcaaaaattatcgatcgagc 40470637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 376519 - 376459
Alignment:
Q  22 ttccgagacctatttgcgtgtgagaattttcagattgccca-aatttttctttttgtaagt 81  Q
    ||||||||||| |||||||||||||||||||| ||| | || ||||||| ||||| |||||    
T  376519 ttccgagacctctttgcgtgtgagaattttcatatttcgcacaatttttttttttttaagt 376459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 9e-81; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 8 - 176
Target Start/End: Original strand, 34389075 - 34389243
Alignment:
Q  8 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  34389075 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattagcttttgggttgggtc 34389174  T
Q  108 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  34389175 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaatcgcccatg 34389243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 37002156 - 37002328
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  37002156 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgga 37002255  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| |||||||||||||||||||||||||||| |||  |||||||||||||||||||| ||||||||||||||    
T  37002256 ttgggtctaatgtgcaaaaattatcgatcgagaccgaacgaccgcccggggtcgccgggcggtgaaaccgccc 37002328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 8867743 - 8867915
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||||||||||||     
T  8867743 tcaatagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttccgattgcccaaatttttctttttgtaaatgtattaattggcttttgga 8867842  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  8867843 ttgggtctaatatgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaactgccc 8867915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 5555642 - 5555467
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| || |||||| ||||||||||    
T  5555642 tcaatagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgcgttaatgggcttttggg 5555543  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||  |||||||||||    
T  5555542 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcccatg 5555467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 35090323 - 35090177
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35090323 tcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattacccaaatttttctttttgtaagtgtgttaattggcttttggg 35090224  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgccc 147  Q
    ||| |||||||||||||||||||| ||||||||||||||||||||||    
T  35090223 ttgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgccc 35090177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 43184480 - 43184658
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43184480 tcaatagtgtgctaaataaaattcagagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtatgttaattggcttttggg 43184579  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatgttc 179  Q
    || ||||| ||| | ||||||||||||||||||||| ||||||||||||  ||||||| |||||||||||||| |||||    
T  43184580 ttaagtctgatgcgtaaaaattatcgatcgagcccgagcgaccgcccggaatcgccgggcggtgaaaccgcccctgttc 43184658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 26624901 - 26624728
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||     
T  26624901 tcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattaacttttgga 26624802  T
Q  101 ttgagtctaatgtgcaaaaattatcg-atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| ||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  26624801 ttgggtctaatatgcaaaaattatcgaatcgagcccaggcgaccgcccggggttgccgggcggtgaaaccgccc 26624728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 3114108 - 3114283
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  3114108 tcaatagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 3114207  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||  |||||  |||||||||||    
T  3114208 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcaccatacggtagaaccgcccatg 3114283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 14777119 - 14777295
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  14777119 tcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgagcttttggg 14777218  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatgt 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||   |||||  ||||||||||||    
T  14777219 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgctacacggtagaaccgcccatgt 14777295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 33685719 - 33685547
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33685719 tcaatagtgtgctaaataaaattatgagacatatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatgggcttttggg 33685620  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| || ||||||||||||||||||||||||||||| ||||| ||| ||||||||||| ||||||||||||||    
T  33685619 ttgggtttaatgtgcaaaaattatcgatcgagcccgagcgactgcctggggtcgccgggcggtgaaaccgccc 33685547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 7002880 - 7002708
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||| |||||||| |||||||||||||||||||||    
T  7002880 tcaatagtgtgctaaataaaattccgtgacctatttgcgtgtgagaatttttagattgtccaaatttttatttttgtatgtgtgttaattggcttttggg 7002781  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| || ||||||  ||||||  |||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  7002780 ttgggtgtaatgtagaaaaatcgtcgatcgagcccgggcgaccgctcggggtcgccgggcggtgaaaccgccc 7002708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 7048751 - 7048579
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||| |||||||| |||||||||||||||||||||    
T  7048751 tcaatagtgtgctaaataaaattccgtgacctatttgcgtgtgagaatttttagattgtccaaatttttatttttgtatgtgtgttaattggcttttggg 7048652  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| || ||||||  ||||||  |||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  7048651 ttgggtgtaatgtagaaaaatcgtcgatcgagcccgggcgaccgctcggggtcgccgggcggtgaaaccgccc 7048579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 8394280 - 8394125
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||||| | ||||| ||    
T  8394280 tcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttccttttgtaaatgtgttaatggactttttgg 8394181  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 156  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8394180 ttgagtttaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 8394125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 36630971 - 36630816
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| ||    
T  36630971 tcaatagtgtgctaactaaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttgg 36630872  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 156  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36630871 ttgagtttaatgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgcc 36630816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 38638248 - 38638380
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38638248 tcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttggg 38638347  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagc 133  Q
    |||  |||||||||||||||||||| |||||||    
T  38638348 ttggatctaatgtgcaaaaattatcaatcgagc 38638380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 40920015 - 40920151
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  40920015 tcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgtccaaatttttctttttgtaaatgtgttaattggcttttggg 40920114  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgg 137  Q
    || | ||||||||||||||||||||||||||||||||    
T  40920115 ttaaatctaatgtgcaaaaattatcgatcgagcccgg 40920151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 36658336 - 36658199
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| ||    
T  36658336 tcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttatttttgttagtatgttaattggcttttcgg 36658237  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccggg 138  Q
    ||| ||| |||||||||||||||||||||||| |||||    
T  36658236 ttgggtccaatgtgcaaaaattatcgatcgagtccggg 36658199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 10868514 - 10868583
Alignment:
Q  30 cctatttgcgtgtgagaattttcagatt--gcccaaatttttctttttgtaagtgtgttaattggctttt 97  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||    
T  10868514 cctatttgcgcgtgagaattttcagattttgcccaaatttttctttttgtaaatgtgttaatgggctttt 10868583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 26502899 - 26502797
Alignment:
Q  66 ttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtga 165  Q
    |||| |||||||| |||||||||| ||||||||||||| |  |||| ||||||||   ||||||||||||||||||| ||| |||||||||  ||||||     
T  26502899 ttttttttttgta-gtgtgttaatgggcttttgggttgggcttaatatgcaaaaaaattcgatcgagcccgggcgactgcctggggtcgccacacggtgg 26502801  T
Q  166 aacc 169  Q
    ||||    
T  26502800 aacc 26502797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 169
Target Start/End: Original strand, 26589815 - 26589917
Alignment:
Q  66 ttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtga 165  Q
    |||| |||||||| |||||||||| ||||||||||||| |  |||| ||||||||   ||||||||||||||||||| ||| |||||||||  ||||||     
T  26589815 ttttttttttgta-gtgtgttaatgggcttttgggttgggcttaatatgcaaaaaaattcgatcgagcccgggcgactgcctggggtcgccacacggtgg 26589913  T
Q  166 aacc 169  Q
    ||||    
T  26589914 aacc 26589917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 10876829 - 10876876
Alignment:
Q  111 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgg 158  Q
    ||||||||||||||||||||||||||||||||| | |||| |||||||    
T  10876829 tgtgcaaaaattatcgatcgagcccgggcgaccacacgggttcgccgg 10876876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 37966614 - 37966666
Alignment:
Q  120 attatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcc 172  Q
    |||||||||||||| ||| |||||||| | ||||||||| |||||||||||||    
T  37966614 attatcgatcgagctcggacgaccgcctgaggtcgccgggcggtgaaaccgcc 37966666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 2e-78; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 45418738 - 45418566
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45418738 tcaatagtgtgctaaataaaattcagagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 45418639  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45418638 ttggatctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 45418566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 8147507 - 8147334
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaatttt-cagattgcccaaatttttctttttgtaagtgtgttaattggcttttgg 99  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||     
T  8147507 tcaatagtgtgttaaataaaattccgagatctatttgcgtgtgagaatttttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttga 8147408  T
Q  100 gttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8147407 gttgggtctaatgtgcaaagattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 8147334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 42440141 - 42439965
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  42440141 tcaatagtgtgctaaataaaattgcaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 42440042  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatgt 177  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||||||||||    
T  42440041 tttagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcccatgt 42439965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 8059345 - 8059517
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  8059345 tcaattgtgtgctaaataaaattccgagaccgatttgtgtgtgagaattttcaaattggccaaatttttctttttgtaagtgtgttaattggcttttggg 8059444  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||| ||||||||||||||||||||||| ||||| |||||| || ||||||||| ||| ||||||||||||||    
T  8059445 ttgactctaatgtgcaaaaattatcgattgagcctgggcgatcggccggggtcgtcgggcggtgaaaccgccc 8059517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 41251646 - 41251798
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  41251646 tcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 41251745  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtc 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41251746 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtc 41251798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 44084615 - 44084787
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||     
T  44084615 tcaatagtgtgctaaataaaattctgagacctatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatgaacttttgga 44084714  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  44084715 ttgggtttaatgtgcaaaaattatcgatcgagcccgggcgactgcccggggtcgccgggcggtgaaaccgccc 44084787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 8 - 173
Target Start/End: Complemental strand, 771147 - 770977
Alignment:
Q  8 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtc 107  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||    
T  771147 tgtgctaaataaagttccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatgggctttttggttgggtc 771048  T
Q  108 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccgg-----ggtcgccggacggtgaaaccgccc 173  Q
    |||||||||||| |||||||||||||||||||||||||||||     ||||||||| ||||||||||||||    
T  771047 taatgtgcaaaagttatcgatcgagcccgggcgaccgcccgggatccggtcgccgggcggtgaaaccgccc 770977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 35962870 - 35962695
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| |||||||||||||| |||||||||  |||||||||    
T  35962870 tcaatagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaaattttctttttgtaaatgtgttaataagcttttggg 35962771  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||  |||||  |||||||||||    
T  35962770 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcctggggtcgccatacggtagaaccgcccatg 35962695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 17445053 - 17445228
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  17445053 tcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 17445152  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatgtt 178  Q
    |||||||||  |||||||||||||||||||||| |||||||||||||| |||||||  |||||  |||||||||||||    
T  17445153 ttgagtcta--gtgcaaaaattatcgatcgagctcgggcgaccgcccgaggtcgccacacggtagaaccgcccatgtt 17445228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 6403816 - 6403991
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||| |||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||   ||||| ||    
T  6403816 tcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgaactttttgg 6403915  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||    
T  6403916 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 6403991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 12756849 - 12756986
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12756849 tcaatagtgtgctaaataaaattccgagacttatttgcgtgtgagaattttcagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 12756948  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccggg 138  Q
    ||| |||||||| |||||||||||||||||| ||||||    
T  12756949 ttgggtctaatgcgcaaaaattatcgatcgaacccggg 12756986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 31581634 - 31581789
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  31581634 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 31581733  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 156  Q
     |||||||||| |||||||| ||||| ||||||| ||||||||||||| |||||||    
T  31581734 atgagtctaatatgcaaaaagtatcgctcgagcctgggcgaccgcccgtggtcgcc 31581789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 32127153 - 32127328
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||  |||||||||    
T  32127153 tcaatagtgtgctaaataaaattccaagatctatttgcgtgtgacaattttcagattgcctaaatttttctttttgtaaatgtgttaatgagcttttggg 32127252  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    | |||| ||||||||||||||||| |||||||||||||||||||||||||||||||  ||| |  |||||||||||    
T  32127253 tcgagtttaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 32127328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 2958131 - 2958289
Alignment:
Q  19 aaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaa 118  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||| ||    
T  2958131 aaattccaagacctatttgcgtgtgacaattttcagattacccaaatttttctctttgtaaatgtgttaatgggcttttgggttgagtctaatgtgc-aa 2958229  T
Q  119 aattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatgtt 178  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||  |||||||||||||    
T  2958230 aattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcccatgtt 2958289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 7 - 176
Target Start/End: Complemental strand, 18981765 - 18981597
Alignment:
Q  7 gtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 106  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| | ||||||||||||||||||||||||| ||| ||||| | ||||||||||||||    
T  18981765 gtgtgctaaataaaattccaagacctatttgcgtgtgacaatttttaaattgcccaaatttttctttttgtaaatgttttaatggacttttgggttgagt 18981666  T
Q  107 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    ||||||||||||||||||| ||||||||||| ||||||||| ||||||||  |||||  |||||||||||    
T  18981665 ctaatgtgcaaaaattatcaatcgagcccggacgaccgccc-gggtcgccatacggtagaaccgcccatg 18981597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 16405755 - 16405603
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||| ||| |||||||||  |||||||||    
T  16405755 tcaatagtgtgctaaataaaattccaagacttatttgcgtgtgacaattttcagattgtccaaatttttctttttataaatgtgttaatgagcttttggg 16405656  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtc 153  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  16405655 ttgagtctaacgtgcaaaaattatcgattgagcccgggcgaccgcccagggtc 16405603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 26162721 - 26162847
Alignment:
Q  8 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtc 107  Q
    ||||||||||||   ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||| |     
T  26162721 tgtgctaaataa---tccgagacctatttgtgtttgagaatttttagattgcccaaatttttctttttgtaagtgtgttaatgggtttttgggttgaatt 26162817  T
Q  108 taatgtgcaaaaattatcgatcgagcccgg 137  Q
    ||||||| ||||||||||||  ||||||||    
T  26162818 taatgtgtaaaaattatcgaaggagcccgg 26162847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 2286017 - 2285887
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| | |||||||||||||||| |||||||||||||| |||||||||| ||| |||| ||||||||| | ||||| ||    
T  2286017 tcaatagtgtgctaaataaaattccaaaacctatttgcgtgtgacaattttcagattgctcaaatttttcctttcgtaaatgtgttaatagactttttgg 2285918  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcga 131  Q
    |||  | ||||||||||||||||||||||||    
T  2285917 ttggatttaatgtgcaaaaattatcgatcga 2285887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 26238071 - 26237955
Alignment:
Q  42 tgagaattttcagatt-gcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcg 140  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||| | ||||||| |||  |||||| |||||||| |||||||||||||||||||    
T  26238071 tgagagttttcagatttgcccaaatttttctttttgtaagtgtgttaatggacttttggtttgcatctaatttgcaaaaa-tatcgatcgagcccgggcg 26237973  T
Q  141 accgcccggggtcgccgg 158  Q
    ||||||||||||||||||    
T  26237972 accgcccggggtcgccgg 26237955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 4555250 - 4555390
Alignment:
Q  30 cctatttgcgtgtgagaattttcagatt--gcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcga 127  Q
    ||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||   |||||||||||| || | ||||||||||||||||||    
T  4555250 cctatttacgtgtgagaattttcagattttgcccaaaattttctttttgtaagtgtgttaacgagcttttgggttgggtttgatgtgcaaaaattatcga 4555349  T
Q  128 tcgagcccgggcgaccgcccggggtcgccggacggtgaaacc 169  Q
    ||||| ||  ||||||||||| | ||||||| ||||| ||||    
T  4555350 tcgagtcc-agcgaccgcccgagatcgccgggcggtggaacc 4555390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 7072589 - 7072710
Alignment:
Q  30 cctatttgcgtgtgagaattttcaga--ttgcccaaatttttctttttgtaagtgtgt--taattggcttttgggttgagtctaatgtgcaaaaattatc 125  Q
    ||||||| |||| |||||||||||||  ||| ||||  |||||||||| |||||||||  |||| |||||||||||||||| ||||||  ||||||||||    
T  7072589 cctatttacgtgcgagaattttcagaatttgtccaatattttctttttataagtgtgtgttaatgggcttttgggttgagtttaatgtaaaaaaattatc 7072688  T
Q  126 gatcgagcccgggcgaccgccc 147  Q
    ||||||||||||||||||||||    
T  7072689 gatcgagcccgggcgaccgccc 7072710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 34523270 - 34523223
Alignment:
Q  126 gatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||    
T  34523270 gatcgagcccgggcgaccgcccggggtcgccgggcggtaaaaccgccc 34523223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 136
Target Start/End: Complemental strand, 34906028 - 34905969
Alignment:
Q  77 taagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccg 136  Q
    ||||||||||||| ||||||||||||  |  |||||||||||||||||||||||||||||    
T  34906028 taagtgtgttaatgggcttttgggttaggcttaatgtgcaaaaattatcgatcgagcccg 34905969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 146; Significance: 1e-76; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 28996885 - 28996708
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  28996885 tcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttagg 28996786  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatgtt 178  Q
    ||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||    
T  28996785 ttgggtctaatgcgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgccgggcggtgaaaccgcccctgtt 28996708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 18339261 - 18339106
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |     
T  18339261 tcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaattggcttttaga 18339162  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 156  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18339161 ttgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 18339106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 34948770 - 34948945
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||| | ||| ||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  34948770 tcaatagtgtgctaaataaaatttcaagatctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 34948869  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||  |||||  |||||||||||    
T  34948870 ttgagtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgccatacggtagaaccgcccatg 34948945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 7 - 173
Target Start/End: Complemental strand, 29743432 - 29743266
Alignment:
Q  7 gtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 106  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||   ||||| ||||| ||    
T  29743432 gtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgcccaaatttttctttctgtaaatgtgttaatgaactttttggttgggt 29743333  T
Q  107 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||||||||||||||||||||| |||||||||| |||||||||| ||| ||||||||||||||||||    
T  29743332 ctaatgtgcaaaaattatcgattgagcccgggcaaccgcccgggatcgtcggacggtgaaaccgccc 29743266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 398772 - 398595
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||| |||||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||||||| ||| |||||||||  |||||| ||    
T  398772 tcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttgg 398673  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatgtt 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||    
T  398672 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatgtt 398595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 13837976 - 13837801
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||  |||||||||    
T  13837976 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttgatgtgcttttggg 13837877  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    ||||||||||||| ||||||||||||||||| |||| |||| ||||||||||||||  |||||  |||||||||||    
T  13837876 ttgagtctaatgtacaaaaattatcgatcgaacccgagcgatcgcccggggtcgccatacggtagaaccgcccatg 13837801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 33229349 - 33229487
Alignment:
Q  2 caattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggt 101  Q
    |||| |||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| || ||||||||| | |||||||||    
T  33229349 caatagtgtgctaaataaaatcccgagacttatttacgtgtaagaattttcagattgcccaaatttttctttttggaaatgtgttaatggacttttgggt 33229448  T
Q  102 tgagtctaatgtgcaaaaattatcgatcgagcccgggcg 140  Q
    || ||||||||| ||||||| ||||||||||||||||||    
T  33229449 tgggtctaatgtacaaaaatgatcgatcgagcccgggcg 33229487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 24697899 - 24698000
Alignment:
Q  71 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 170  Q
    ||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||| ||||||||||||  | ||||||||||||| |||||||||||    
T  24697899 tttttgtaagtgtgttaatgggcttttgggttgggcctaatgtgaaaaaattatcgattgagcccgggcgagtgtccggggtcgccgggcggtgaaaccg 24697998  T
Q  171 cc 172  Q
    ||    
T  24697999 cc 24698000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 31028435 - 31028545
Alignment:
Q  60 ccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgga 159  Q
    ||||| ||| |||||||||| |||||||||  |||||| |||||  ||||||||||||||||||||||||||| |||||| ||||| ||||||||||||     
T  31028435 ccaaaatttcctttttgtaaatgtgttaatgagcttttaggttggatctaatgtgcaaaaattatcgatcgagtccgggcaaccgctcggggtcgccggg 31028534  T
Q  160 cggtgaaaccg 170  Q
    |||||||||||    
T  31028535 cggtgaaaccg 31028545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 13647053 - 13646995
Alignment:
Q  120 attatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatgtt 178  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||    
T  13647053 attatcgatcgagcccgggcgaccgcccggggtcgccgggtggtgaaaccgcccctgtt 13646995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 24695572 - 24695472
Alignment:
Q  71 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 170  Q
    ||||||||||||||||||| ||||||||||||||| |||||||  |||||| ||||||  |||| ||||||  | ||| ||||  |||||||||||||||    
T  24695572 tttttgtaagtgtgttaatgggcttttgggttgagcctaatgttaaaaaatgatcgatttagcctgggcgagtgtccgaggtc-tcggacggtgaaaccg 24695474  T
Q  171 cc 172  Q
    ||    
T  24695473 cc 24695472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 34385519 - 34385572
Alignment:
Q  120 attatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  34385519 attatcgatcgagccagggcaaccgcccggggtcgccgggcggtgaaaccgccc 34385572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 2753387 - 2753336
Alignment:
Q  119 aattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 170  Q
    |||||||||| |||| ||||||||||||  ||||||||||||||||||||||    
T  2753387 aattatcgattgagctcgggcgaccgcctagggtcgccggacggtgaaaccg 2753336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 3050157 - 3050094
Alignment:
Q  78 aagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcga 141  Q
    |||||||||||| ||||||| ||||| |   |||||||||||||||| ||| ||||||||||||    
T  3050157 aagtgtgttaatgggcttttcggttgcgctcaatgtgcaaaaattattgattgagcccgggcga 3050094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 21149331 - 21149385
Alignment:
Q  119 aattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||||||||||| |||||| ||||||||||| |||| |||| ||||||||| ||||    
T  21149331 aattatcgatcaagcccgagcgaccgcccgaggtcaccgggcggtgaaactgccc 21149385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 24072625 - 24072576
Alignment:
Q  79 agtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgat 128  Q
    ||||||||||| || |||||||||   |||||||||||||||||||||||    
T  24072625 agtgtgttaatgggtttttgggttcgatctaatgtgcaaaaattatcgat 24072576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 3e-71; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 8 - 176
Target Start/End: Complemental strand, 35907700 - 35907532
Alignment:
Q  8 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||  |||||||||||||||||| |||    
T  35907700 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattacccaaaattttctttttgtaagtgtactaattggcttttgggttgggtc 35907601  T
Q  108 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||    
T  35907600 taatgtgcaaaaattatcgatcaagcccgggcgaccgcccgaggtcgccgggcggtgaaaccgcccatg 35907532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 8 - 173
Target Start/End: Complemental strand, 17445461 - 17445296
Alignment:
Q  8 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||    
T  17445461 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggttggatc 17445362  T
Q  108 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||||| |||||||||| |||| |||||||||||||||  ||||||||||| |  |||||||||||    
T  17445361 taatgtacaaaaattattgatccagcccgggcgaccgcatggggtcgccgggcaatgaaaccgccc 17445296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 26144410 - 26144235
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||| |||||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||||||| ||| |||||||||  |||||| ||    
T  26144410 tcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttgg 26144311  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||    
T  26144310 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 26144235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 7433600 - 7433424
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||| | ||||||||||| |||||| |||||| |||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  7433600 tcaatagtgtgctaaataaaatttcaagacctatttgtgtgtgacaatttttagattgcccaaaattttctttttgtaaatgtgttaatgggcttttggg 7433501  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatgt 177  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||  |||||  ||||||||||||    
T  7433500 ttgagtctaatgtgcaaaaattatagatcgagctcgggcgaccgcccggggttgccatacggtagaaccgcccatgt 7433424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 42310964 - 42311125
Alignment:
Q  12 ctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaat 111  Q
    |||||||||||| | |||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  42310964 ctaaataaaatttcaagacttatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaacgggcttttgggttgagtctaat 42311063  T
Q  112 gtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||||||||||||||||||||||||||||| || | |||||||||  |||||  ||||||||    
T  42311064 gtgcaaaaattatcgatcgagcccgggcgatcgtctggggtcgccatacggtagaaccgccc 42311125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 3829138 - 3828967
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||    
T  3829138 tcaatagtgtgctaaataaaattcc-agacctatttgcgtatgaaaattttcagattgcccaaatttttctttttgtaagtgtgttaatgaacttttggg 3829040  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| || |||||||||||||||||||||||| |||| ||||||| ||||||| |||||  | |||||||||||    
T  3829039 ttgggtttaatgtgcaaaaattatcgatcgaacccgagcgaccgtccggggttgccgggtgatgaaaccgccc 3828967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 32982076 - 32982223
Alignment:
Q  9 gtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtct 108  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||||||||| |||||||||||||||||||| | ||||||| ||||||| ||||| ||||    
T  32982076 gtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgtccaaatttttctttttgtaaatatgttaatgggcttttaggttgggtct 32982175  T
Q  109 aatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 156  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||    
T  32982176 aatgtgcaaaaattatcgatcgggcccgcgcgaccgcccggggtcgcc 32982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 8 - 173
Target Start/End: Original strand, 321396 - 321561
Alignment:
Q  8 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtc 107  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||  ||    
T  321396 tgtgttaaataaaattccgagacctatttgcatatgagaattttcagattgcccaaatttttctttttgtaactgtgttaatggacttttgggttggatc 321495  T
Q  108 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||||  ||||||||||||||||||||||| ||||||||||   |||||||  |||||||||||||    
T  321496 taatgcacaaaaattatcgatcgagcccggacgaccgcccgaaatcgccgggtggtgaaaccgccc 321561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 30 - 173
Target Start/End: Original strand, 41972314 - 41972458
Alignment:
Q  30 cctatttgcgtgtgagaattttcagattgc--ccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcga 127  Q
    ||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||    
T  41972314 cctatttgcgtgtgagaattttcagattttttccaaatttttctttttgtaagtgtgttaataggcttttaggttggatctaatgtgcaaaaattatcga 41972413  T
Q  128 tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||||| || ||||||||||||||||||| |||||||| ||||||||    
T  41972414 tcgag-ccaggcgaccgcccggggtcgctggacggtggaaccgccc 41972458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 30 - 173
Target Start/End: Complemental strand, 33489815 - 33489670
Alignment:
Q  30 cctatttgcgtgtgagaattttcagatt--gcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcga 127  Q
    ||||||||||||||||||||||||||||  || |||||||||||||| |||||||||||||| ||||||| | ||||||||||||| |||||||||||||    
T  33489815 cctatttgcgtgtgagaattttcagattttgctcaaatttttcttttagtaagtgtgttaatgggcttttagtttgagtctaatgtacaaaaattatcga 33489716  T
Q  128 tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
     | | ||||  |||||| |||||||||||||  |||||||||||||    
T  33489715 acaatcccgaacgaccgtccggggtcgccgggtggtgaaaccgccc 33489670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 23313345 - 23313217
Alignment:
Q  50 ttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaa-aaattatcgatcgagcccgggcgaccgcccg 148  Q
    |||||||||||||||||||||||||||||| |||||||||   |||||  |||||||||||||||||| |||| ||| ||||||||||||| ||||||||    
T  23313345 ttcagattgcccaaatttttctttttgtaaatgtgttaatgaacttttatgttgagtctaatgtgcaacaaatcatcaatcgagcccgggcaaccgcccg 23313246  T
Q  149 gggtcgccggacggtgaaaccgcccatgt 177  Q
     | |||||  |||||  ||||||||||||    
T  23313245 agatcgccatacggtagaaccgcccatgt 23313217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 44352614 - 44352672
Alignment:
Q  120 attatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatgtt 178  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  44352614 attatcgatcgagcccgggcgacctcccggggtcgccggatggtgaaaccgcccctgtt 44352672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 31867014 - 31866960
Alignment:
Q  119 aattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||||||||||||    
T  31867014 aattatcggtcgaacccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 31866960  T

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Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 48901207 - 48901288
Alignment:
Q  91 ggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||||||||||||| | |||||||||| |||||||||||||| ||| ||| ||||||||| || ||||| ||||| ||||||||    
T  48901207 ggcttttgggttgggcctaatgtgcataaattatcgatcga-ccccggccaccgcccggagttgccgggcggtggaaccgccc 48901288  T

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Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 35951427 - 35951493
Alignment:
Q  71 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgg 137  Q
    ||||||| ||||||||||| |||| |||||||    ||||||| |||||||||||||||||||||||    
T  35951427 tttttgttagtgtgttaatgggctattgggttcgacctaatgtacaaaaattatcgatcgagcccgg 35951493  T

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Target: scaffold0502 (Bit Score: 128; Significance: 7e-66; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 5385 - 5230
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |     
T  5385 tcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaattggcttttaga 5286  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 156  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5285 ttgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 5230  T

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Target: scaffold0154 (Bit Score: 121; Significance: 1e-61; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31635 - 31463
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||| |||||||||| | ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  31635 tcaatagtgtgcaaaataaaattactagacctatttgcgagtgagaattttcagattgtccaaatttttctttttgtaagtgtgttaatgggcttttggg 31536  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||| ||||| |||||||||||||||||||||||||||||||||| | ||||||||||| || |||||||||||    
T  31535 ttgggtctagtgtgcaaaaattatcgatcgagcccgggcgaccgtctggggtcgccgggcgatgaaaccgccc 31463  T

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Target: scaffold0069 (Bit Score: 116; Significance: 1e-58; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 17997 - 17822
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| ||||||||||||||||| | |||||||||| | ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  17997 tcaatagtgtgctaaataaaatttcaagacctatttacatgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 17898  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||  |||||  |||||||||||    
T  17897 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgatcgctcggggtcgccacacggtagaaccgcccatg 17822  T

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Target: scaffold0002 (Bit Score: 116; Significance: 1e-58; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 480469 - 480644
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||| |||||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||||||| ||| |||||||||  |||||| ||    
T  480469 tcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttgg 480568  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||    
T  480569 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 480644  T

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Target: scaffold0041 (Bit Score: 113; Significance: 7e-57; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 53080 - 52944
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  53080 tcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgtccaaatttttctttttgtaaatgtgttaattggcttttggg 52981  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgg 137  Q
    || | ||||||||||||||||||||||||||||||||    
T  52980 ttaaatctaatgtgcaaaaattatcgatcgagcccgg 52944  T

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Target: scaffold2142 (Bit Score: 112; Significance: 3e-56; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 677 - 502
Alignment:
Q  1 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 100  Q
    ||||| |||||| |||||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||||||| ||| |||||||||  |||||| ||    
T  677 tcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttgg 578  T
Q  101 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||   |||||| |||||||||||    
T  577 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgctacacggtggaaccgcccatg 502  T

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Target: scaffold0769 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 1307 - 1260
Alignment:
Q  126 gatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 173  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||    
T  1307 gatcgagcccgggcgaccgcccggggtcgccgggcggtaaaaccgccc 1260  T

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Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 163
Target Start/End: Complemental strand, 194118 - 194021
Alignment:
Q  65 tttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggt 163  Q
    ||||| |||||| |||||||| ||| ||| | | ||||| | ||||||||   ||||||  ||||||||||||||||||||||||||||||||| ||||    
T  194118 tttttttttttg-aagtgtgtaaatgggcctataggttgggcctaatgtgaggaaattacggatcgagcccgggcgaccgcccggggtcgccgggcggt 194021  T

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