View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10403_5 (Length: 360)

Name: NF10403_5
Description: NF10403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10403_5
NF10403_5
[»] chr1 (20 HSPs)
chr1 (45-331)||(36753288-36753574)
chr1 (1-40)||(17968036-17968075)
chr1 (1-40)||(45230612-45230651)
chr1 (1-39)||(30428156-30428194)
chr1 (1-41)||(47410905-47410945)
chr1 (1-40)||(32266482-32266521)
chr1 (1-40)||(32266965-32267004)
chr1 (1-40)||(9122684-9122723)
chr1 (1-40)||(30427672-30427711)
chr1 (1-40)||(40124558-40124597)
chr1 (16-51)||(46634533-46634568)
chr1 (1-40)||(46802321-46802360)
chr1 (10-45)||(46802813-46802848)
chr1 (8-42)||(45230126-45230160)
chr1 (10-39)||(9123176-9123205)
chr1 (7-39)||(3591222-3591254)
chr1 (16-44)||(11192738-11192766)
chr1 (8-40)||(42723122-42723154)
chr1 (16-44)||(44243018-44243046)
chr1 (7-39)||(50359325-50359357)
[»] chr4 (35 HSPs)
chr4 (1-46)||(28505202-28505247)
chr4 (1-40)||(30546197-30546236)
chr4 (1-40)||(43980040-43980079)
chr4 (1-42)||(46262632-46262673)
chr4 (1-41)||(2669489-2669529)
chr4 (1-41)||(12922640-12922680)
chr4 (1-41)||(21235026-21235066)
chr4 (1-41)||(28957793-28957833)
chr4 (1-41)||(31227877-31227917)
chr4 (1-41)||(40841460-40841500)
chr4 (1-40)||(789894-789933)
chr4 (1-40)||(1317543-1317582)
chr4 (1-40)||(28957310-28957349)
chr4 (7-40)||(26168277-26168310)
chr4 (1-41)||(1317058-1317098)
chr4 (8-40)||(5544956-5544988)
chr4 (1-37)||(12107708-12107744)
chr4 (1-41)||(46263118-46263158)
chr4 (8-40)||(47058566-47058598)
chr4 (1-40)||(30545712-30545751)
chr4 (1-40)||(40841944-40841983)
chr4 (7-41)||(29691797-29691831)
chr4 (1-39)||(31228361-31228399)
chr4 (7-37)||(48554071-48554101)
chr4 (1-42)||(790378-790419)
chr4 (7-40)||(29691696-29691729)
chr4 (16-44)||(10459359-10459387)
chr4 (7-39)||(10580040-10580072)
chr4 (16-44)||(13483274-13483302)
chr4 (7-39)||(26168165-26168197)
chr4 (8-40)||(30608417-30608449)
chr4 (1-41)||(43979555-43979595)
chr4 (8-40)||(47053760-47053792)
chr4 (8-40)||(49426411-49426443)
chr4 (8-40)||(51906705-51906737)
[»] chr2 (24 HSPs)
chr2 (1-42)||(3854549-3854590)
chr2 (1-40)||(22704436-22704475)
chr2 (1-39)||(26525946-26525984)
chr2 (1-41)||(27378131-27378171)
chr2 (1-40)||(1804231-1804270)
chr2 (1-40)||(1804714-1804753)
chr2 (1-40)||(6476086-6476125)
chr2 (1-40)||(6476569-6476608)
chr2 (1-40)||(11450755-11450794)
chr2 (1-40)||(11451238-11451277)
chr2 (1-40)||(12090177-12090216)
chr2 (1-40)||(27377648-27377687)
chr2 (1-40)||(39097008-39097047)
chr2 (7-41)||(32860984-32861018)
chr2 (1-41)||(3854064-3854104)
chr2 (8-40)||(7083694-7083726)
chr2 (8-40)||(10708022-10708054)
chr2 (1-41)||(39096522-39096562)
chr2 (9-40)||(39947146-39947177)
chr2 (6-40)||(23222920-23222954)
chr2 (1-39)||(26525462-26525500)
chr2 (10-40)||(44929982-44930012)
chr2 (10-40)||(44934744-44934774)
chr2 (8-40)||(12089693-12089725)
[»] chr8 (9 HSPs)
chr8 (1-40)||(12734172-12734211)
chr8 (1-40)||(29917589-29917628)
chr8 (7-39)||(21006007-21006039)
chr8 (1-40)||(29917104-29917143)
chr8 (7-40)||(13315374-13315407)
chr8 (1-38)||(20682976-20683013)
chr8 (7-39)||(6297747-6297779)
chr8 (8-40)||(21005894-21005926)
chr8 (7-39)||(44024398-44024430)
[»] chr7 (17 HSPs)
chr7 (1-40)||(1244494-1244533)
chr7 (1-40)||(28898028-28898067)
chr7 (1-40)||(41298727-41298766)
chr7 (1-49)||(18443166-18443214)
chr7 (1-41)||(41298242-41298282)
chr7 (1-40)||(18443660-18443699)
chr7 (1-40)||(884681-884720)
chr7 (1-40)||(1244010-1244049)
chr7 (7-38)||(11974944-11974975)
chr7 (8-39)||(28838525-28838556)
chr7 (1-40)||(28898512-28898551)
chr7 (1-40)||(29784430-29784469)
chr7 (1-40)||(33847865-33847904)
chr7 (1-39)||(29783935-29783973)
chr7 (11-39)||(18152929-18152957)
chr7 (7-39)||(23548892-23548924)
chr7 (6-42)||(32092225-32092261)
[»] chr6 (13 HSPs)
chr6 (1-40)||(33107412-33107451)
chr6 (1-40)||(34984595-34984634)
chr6 (1-38)||(6162739-6162776)
chr6 (1-46)||(15147711-15147756)
chr6 (1-40)||(14257146-14257185)
chr6 (1-40)||(20824646-20824685)
chr6 (7-39)||(8709646-8709678)
chr6 (7-39)||(14712830-14712862)
chr6 (1-41)||(20824162-20824202)
chr6 (7-37)||(17157831-17157861)
chr6 (1-37)||(5975937-5975973)
chr6 (8-40)||(7645868-7645900)
chr6 (1-37)||(33106931-33106967)
[»] chr5 (27 HSPs)
chr5 (1-40)||(31093478-31093517)
chr5 (1-40)||(39402211-39402250)
chr5 (1-41)||(3879255-3879295)
chr5 (1-41)||(31162903-31162943)
chr5 (1-40)||(5746760-5746799)
chr5 (1-40)||(5747243-5747282)
chr5 (1-40)||(6543414-6543453)
chr5 (1-40)||(28641160-28641199)
chr5 (1-39)||(21949400-21949438)
chr5 (1-42)||(3191795-3191836)
chr5 (7-40)||(35373620-35373653)
chr5 (8-40)||(87147-87179)
chr5 (8-40)||(119009-119041)
chr5 (8-40)||(120017-120049)
chr5 (1-41)||(28641643-28641683)
chr5 (1-41)||(39402696-39402736)
chr5 (1-40)||(3192282-3192321)
chr5 (1-40)||(3878771-3878810)
chr5 (1-40)||(14625121-14625160)
chr5 (1-40)||(31162420-31162459)
chr5 (6-40)||(4187893-4187927)
chr5 (7-53)||(31588405-31588451)
chr5 (1-38)||(21949882-21949919)
chr5 (7-40)||(35383412-35383445)
chr5 (8-40)||(718283-718315)
chr5 (16-44)||(26338849-26338877)
chr5 (16-44)||(34728984-34729012)
[»] chr3 (24 HSPs)
chr3 (1-40)||(4199937-4199976)
chr3 (1-40)||(27475389-27475428)
chr3 (1-40)||(34949755-34949794)
chr3 (1-40)||(4199452-4199491)
chr3 (1-40)||(22407325-22407364)
chr3 (1-40)||(36899253-36899292)
chr3 (1-40)||(45539691-45539730)
chr3 (1-40)||(46690164-46690203)
chr3 (10-42)||(20831162-20831194)
chr3 (1-40)||(42606279-42606318)
chr3 (1-40)||(45539208-45539247)
chr3 (1-35)||(2388636-2388670)
chr3 (8-38)||(9217994-9218024)
chr3 (10-40)||(20826727-20826757)
chr3 (10-40)||(35300743-35300773)
chr3 (10-40)||(42606771-42606801)
chr3 (10-43)||(2389123-2389156)
chr3 (1-38)||(27013583-27013620)
chr3 (8-41)||(34950246-34950279)
chr3 (16-44)||(6471449-6471477)
chr3 (9-37)||(7248217-7248245)
chr3 (7-39)||(9218399-9218431)
chr3 (10-42)||(36899745-36899777)
chr3 (7-39)||(37172254-37172286)
[»] scaffold0085 (2 HSPs)
scaffold0085 (1-40)||(39903-39942)
scaffold0085 (1-40)||(39420-39459)
[»] scaffold0009 (2 HSPs)
scaffold0009 (7-40)||(108007-108040)
scaffold0009 (1-39)||(107895-107933)
[»] scaffold0148 (2 HSPs)
scaffold0148 (8-40)||(33053-33085)
scaffold0148 (8-40)||(29273-29305)


Alignment Details
Target: chr1 (Bit Score: 283; Significance: 1e-158; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 45 - 331
Target Start/End: Original strand, 36753288 - 36753574
Alignment:
Q  45 gtatatatggaattgaattaaggtcacctagggcctaatataagctacattatcaaaaggtagggtatcactatacaaacggtcaattgtcacggccacg 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36753288 gtatatatggaattgaattaaggtcacctagggcctaatataagctacattatcaaaaggtagggtatcactatacaaacggtcaattgtcacggccacg 36753387  T
Q  145 ttaccatttcagcatcgatgttgacaccatgattcttaagatagcttgctctatttatttaccgttttgcaccttaagccatcaccataaacacagctca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36753388 ttaccatttcagcatcgatgttgacaccatgattcttaagatagcttgctctatttatttaccgttttgcaccttaagccatcaccataaacacagctca 36753487  T
Q  245 aatgcccctcatatcatatgtcttaggttaacatcccttcaacaaaaaagtcttagattaacatctcttctatattggtgttcgttt 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36753488 aatgcccctcatatcatatgtcttaggttaacatcccttcaacaaaaaagtcttaggttaacatctcttctatattggtgttcgttt 36753574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 17968075 - 17968036
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17968075 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 17968036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 45230612 - 45230651
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45230612 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 45230651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30428156 - 30428194
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30428156 aaatcgcgcaaaatgtagggaccaaaaacatatttaacc 30428194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47410905 - 47410945
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  47410905 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccca 47410945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 32266521 - 32266482
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  32266521 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 32266482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 32266965 - 32267004
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  32266965 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 32267004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9122723 - 9122684
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  9122723 aaatcgcgtaaaatgtggggaccaaaaacatatttaaccc 9122684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 30427711 - 30427672
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  30427711 aaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 30427672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 40124558 - 40124597
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  40124558 aaatcgcgtaaaatgtagggaccaaaaatatatttaaccc 40124597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 46634568 - 46634533
Alignment:
Q  16 tagggaccaaaaacatatttaacccattagtatata 51  Q
    ||||||||||||||||||||||||||||| ||||||    
T  46634568 tagggaccaaaaacatatttaacccattaatatata 46634533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 46802360 - 46802321
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  46802360 aaatcgcgtaaaatgtggggaccaaaaacatatttaaccc 46802321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 46802813 - 46802848
Alignment:
Q  10 aaaatgtagggaccaaaaacatatttaacccattag 45  Q
    ||||||||||||||||||||||||||||||| ||||    
T  46802813 aaaatgtagggaccaaaaacatatttaaccctttag 46802848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 45230160 - 45230126
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaacccat 42  Q
    |||||| ||||||||||||||||||||||||||||    
T  45230160 gcaaaacgtagggaccaaaaacatatttaacccat 45230126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 39
Target Start/End: Original strand, 9123176 - 9123205
Alignment:
Q  10 aaaatgtagggaccaaaaacatatttaacc 39  Q
    ||||||||||||||||||||||||||||||    
T  9123176 aaaatgtagggaccaaaaacatatttaacc 9123205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 3591222 - 3591254
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    |||| ||||||||||||||||||||||||||||    
T  3591222 cgcacaatgtagggaccaaaaacatatttaacc 3591254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 11192738 - 11192766
Alignment:
Q  16 tagggaccaaaaacatatttaacccatta 44  Q
    |||||||||||||||||||||||||||||    
T  11192738 tagggaccaaaaacatatttaacccatta 11192766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 42723154 - 42723122
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||| |||||||||||||||||    
T  42723154 gcaaaatgtagggacaaaaaacatatttaaccc 42723122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 44243018 - 44243046
Alignment:
Q  16 tagggaccaaaaacatatttaacccatta 44  Q
    |||||||||||||||||||||||||||||    
T  44243018 tagggaccaaaaacatatttaacccatta 44243046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 50359325 - 50359357
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    |||| ||||||||||||||||||||||||||||    
T  50359325 cgcagaatgtagggaccaaaaacatatttaacc 50359357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28505247 - 28505202
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaacccattagt 46  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  28505247 aaatcgtgcaaaatgtagggaccaaaaacatatttaacccattagt 28505202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 30546197 - 30546236
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30546197 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 30546236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 43980040 - 43980079
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43980040 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 43980079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 46262673 - 46262632
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaacccat 42  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  46262673 aaattgcgcaaaatgtagggaccaaaaacatatttaacccat 46262632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2669489 - 2669529
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  2669489 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccca 2669529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 12922680 - 12922640
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  12922680 aaattgcgcaaaatgtagggaccaaaaacatatttaaccca 12922640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21235066 - 21235026
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  21235066 aaatcgtgcaaaatgtagggaccaaaaacatatttaaccca 21235026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28957793 - 28957833
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  28957793 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccca 28957833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31227917 - 31227877
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  31227917 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccca 31227877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40841500 - 40841460
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  40841500 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccca 40841460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 789933 - 789894
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  789933 aaattgcgcaaaatgtagggaccaaaaacatatttaaccc 789894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1317543 - 1317582
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  1317543 aaatcgcgcaaaatgtaggaaccaaaaacatatttaaccc 1317582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 28957349 - 28957310
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  28957349 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 28957310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 26168277 - 26168310
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  26168277 cgcaaaatgtagggaccaaaaacatatttaaccc 26168310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1317098 - 1317058
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  1317098 aaatcgtgcaaaacgtagggaccaaaaacatatttaaccca 1317058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 5544988 - 5544956
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||||||||||||||||||    
T  5544988 gcaaaatgtagggaccaaaaacatatttaaccc 5544956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 12107744 - 12107708
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaa 37  Q
    |||||||| ||||||||||||||||||||||||||||    
T  12107744 aaatcgcgtaaaatgtagggaccaaaaacatatttaa 12107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46263118 - 46263158
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  46263118 aaatcgtgcaaaacgtagggaccaaaaacatatttaaccca 46263158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 47058566 - 47058598
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||||||||||||||||||    
T  47058566 gcaaaatgtagggaccaaaaacatatttaaccc 47058598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 30545751 - 30545712
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  30545751 aaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 30545712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 40841944 - 40841983
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  40841944 aaatcgcgtaaaatgtagggaccaaaaacataattaaccc 40841983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 29691797 - 29691831
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    ||||||||||| |||||||||||||||||||||||    
T  29691797 cgcaaaatgtaaggaccaaaaacatatttaaccca 29691831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31228361 - 31228399
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  31228361 aaatcgcgtaaaatgtagggatcaaaaacatatttaacc 31228399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 48554101 - 48554071
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaa 37  Q
    |||||||||||||||||||||||||||||||    
T  48554101 cgcaaaatgtagggaccaaaaacatatttaa 48554071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 790378 - 790419
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaacccat 42  Q
    |||||| ||||||  |||||||||||||||||||||||||||    
T  790378 aaatcgtgcaaaacttagggaccaaaaacatatttaacccat 790419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 29691729 - 29691696
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||| |||||||||||||||||    
T  29691729 cgcaaaatgtagggactaaaaacatatttaaccc 29691696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 10459359 - 10459387
Alignment:
Q  16 tagggaccaaaaacatatttaacccatta 44  Q
    |||||||||||||||||||||||||||||    
T  10459359 tagggaccaaaaacatatttaacccatta 10459387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 10580072 - 10580040
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    ||||||||||| |||||||||||||||||||||    
T  10580072 cgcaaaatgtatggaccaaaaacatatttaacc 10580040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 13483274 - 13483302
Alignment:
Q  16 tagggaccaaaaacatatttaacccatta 44  Q
    |||||||||||||||||||||||||||||    
T  13483274 tagggaccaaaaacatatttaacccatta 13483302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 26168197 - 26168165
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    ||||||||||||||| |||||||||||||||||    
T  26168197 cgcaaaatgtagggatcaaaaacatatttaacc 26168165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 30608449 - 30608417
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||||||||||||| ||||    
T  30608449 gcaaaatgtagggaccaaaaacatatttgaccc 30608417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43979595 - 43979555
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||| ||||||  ||||||||||||||||||||||||||    
T  43979595 aaatcgtgcaaaacatagggaccaaaaacatatttaaccca 43979555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 47053792 - 47053760
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||| ||||||||||||||    
T  47053792 gcaaaatgtagggaccaataacatatttaaccc 47053760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 49426411 - 49426443
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||| |||||||||||||||||    
T  49426411 gcaaaatgtagggacaaaaaacatatttaaccc 49426443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 51906705 - 51906737
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||||| ||||||||||||    
T  51906705 gcaaaatgtagggaccaaaatcatatttaaccc 51906737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3854549 - 3854590
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaacccat 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3854549 aaatcgcgcaaaatgtagggaccaaaaacatatttaacccat 3854590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22704436 - 22704475
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22704436 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 22704475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26525946 - 26525984
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26525946 aaatcgcgcaaaatgtagggaccaaaaacatatttaacc 26525984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27378131 - 27378171
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  27378131 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccca 27378171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 1804270 - 1804231
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  1804270 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 1804231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1804714 - 1804753
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  1804714 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 1804753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 6476125 - 6476086
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  6476125 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 6476086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 6476569 - 6476608
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  6476569 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 6476608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 11450794 - 11450755
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  11450794 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 11450755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 11451238 - 11451277
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  11451238 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 11451277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 12090177 - 12090216
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  12090177 aaatcgcgcaaaatgcagggaccaaaaacatatttaaccc 12090216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 27377687 - 27377648
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  27377687 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 27377648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 39097008 - 39097047
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  39097008 aaatcgtgcaaaatgtagggaccaaaaacatatttaaccc 39097047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 32861018 - 32860984
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||||||||||||||||||||||||||||||||    
T  32861018 cgcaaaatgtagggaccaaaaacatatttaaccca 32860984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3854104 - 3854064
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  3854104 aaatcgtgcaaaacgtagggaccaaaaacatatttaaccca 3854064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 7083726 - 7083694
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||||||||||||||||||    
T  7083726 gcaaaatgtagggaccaaaaacatatttaaccc 7083694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 10708054 - 10708022
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||||||||||||||||||    
T  10708054 gcaaaatgtagggaccaaaaacatatttaaccc 10708022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39096562 - 39096522
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  39096562 aaatcgcacaaaatatagggaccaaaaacatatttaaccca 39096522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 40
Target Start/End: Original strand, 39947146 - 39947177
Alignment:
Q  9 caaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||    
T  39947146 caaaatgtagggaccaaaaacatatttaaccc 39947177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 23222920 - 23222954
Alignment:
Q  6 gcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||| |||||||||||||||||    
T  23222920 gcgcaaaatgtagggactaaaaacatatttaaccc 23222954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26525500 - 26525462
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  26525500 aaatcgtgcaaaacgtagggaccaaaaacatatttaacc 26525462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 40
Target Start/End: Complemental strand, 44930012 - 44929982
Alignment:
Q  10 aaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||||||||||||||||    
T  44930012 aaaatgtagggaccaaaaacatatttaaccc 44929982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 40
Target Start/End: Original strand, 44934744 - 44934774
Alignment:
Q  10 aaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||||||||||||||||    
T  44934744 aaaatgtagggaccaaaaacatatttaaccc 44934774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 12089725 - 12089693
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||| ||||||||||||||||||||||||||    
T  12089725 gcaaaacgtagggaccaaaaacatatttaaccc 12089693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12734211 - 12734172
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12734211 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 12734172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 29917589 - 29917628
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  29917589 aaatcgtgcaaaatgtagggaccaaaaacatatttaaccc 29917628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 21006007 - 21006039
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    |||||||||||||||||||||||||||||||||    
T  21006007 cgcaaaatgtagggaccaaaaacatatttaacc 21006039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29917143 - 29917104
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  29917143 aaatcgcgcaaaacgtagggatcaaaaacatatttaaccc 29917104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 13315407 - 13315374
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||| |||||||||||||||||    
T  13315407 cgcaaaatgtagggactaaaaacatatttaaccc 13315374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20682976 - 20683013
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaac 38  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  20682976 aaatcgcgctaaatgtagggaccaataacatatttaac 20683013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 6297747 - 6297779
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    |||||||||||||||||||||||||| ||||||    
T  6297747 cgcaaaatgtagggaccaaaaacataattaacc 6297779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 21005926 - 21005894
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||| |||||||||||    
T  21005926 gcaaaatgtagggaccaaaaatatatttaaccc 21005894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 44024430 - 44024398
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    ||||||||||| |||||||||||||||||||||    
T  44024430 cgcaaaatgtaaggaccaaaaacatatttaacc 44024398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1244494 - 1244533
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1244494 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 1244533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 28898067 - 28898028
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28898067 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 28898028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 41298727 - 41298766
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41298727 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 41298766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18443214 - 18443166
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaacccattagtata 49  Q
    |||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  18443214 aaatcgtgcaaaatgtagggaccaaaaacatatttaacctattattata 18443166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41298282 - 41298242
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  41298282 aaatcgtgcaaaatgtagggaccaaaaacatatttaaccca 41298242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 18443660 - 18443699
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  18443660 aaatcgcgcaaaatgtaaggaccaaaaacatatttaaccc 18443699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 884720 - 884681
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  884720 aaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 884681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 1244049 - 1244010
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  1244049 aaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 1244010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 11974944 - 11974975
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaac 38  Q
    ||||||||||||||||||||||||||||||||    
T  11974944 cgcaaaatgtagggaccaaaaacatatttaac 11974975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 39
Target Start/End: Complemental strand, 28838556 - 28838525
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaacc 39  Q
    ||||||||||||||||||||||||||||||||    
T  28838556 gcaaaatgtagggaccaaaaacatatttaacc 28838525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 28898512 - 28898551
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  28898512 aaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 28898551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 29784430 - 29784469
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  29784430 aaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 29784469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 33847904 - 33847865
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  33847904 aaatcgcgtaaaatatagggaccaaaaacatatttaaccc 33847865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29783973 - 29783935
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  29783973 aaatcgcacaaaatgtagggactaaaaacatatttaacc 29783935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 39
Target Start/End: Complemental strand, 18152957 - 18152929
Alignment:
Q  11 aaatgtagggaccaaaaacatatttaacc 39  Q
    |||||||||||||||||||||||||||||    
T  18152957 aaatgtagggaccaaaaacatatttaacc 18152929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 23548892 - 23548924
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    |||||||||||||||||||||| ||||||||||    
T  23548892 cgcaaaatgtagggaccaaaaatatatttaacc 23548924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 32092261 - 32092225
Alignment:
Q  6 gcgcaaaatgtagggaccaaaaacatatttaacccat 42  Q
    |||||||||||| |||| |||||||||||||||||||    
T  32092261 gcgcaaaatgtaaggactaaaaacatatttaacccat 32092225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33107412 - 33107451
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33107412 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 33107451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 34984595 - 34984634
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34984595 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 34984634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6162739 - 6162776
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaac 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6162739 aaatcgcgcaaaatgtagggaccaaaaacatatttaac 6162776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 15147756 - 15147711
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaacccattagt 46  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||    
T  15147756 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccctttagt 15147711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 14257185 - 14257146
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  14257185 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 14257146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 20824646 - 20824685
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  20824646 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 20824685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 8709646 - 8709678
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    |||||||||||||||||||||||||||||||||    
T  8709646 cgcaaaatgtagggaccaaaaacatatttaacc 8709678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 14712862 - 14712830
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    |||||||||||||||||||||||||||||||||    
T  14712862 cgcaaaatgtagggaccaaaaacatatttaacc 14712830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20824202 - 20824162
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  20824202 aaatcgtgtaaaatgtagggaccaaaaacatatttaaccca 20824162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 17157831 - 17157861
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaa 37  Q
    |||||||||||||||||||||||||||||||    
T  17157831 cgcaaaatgtagggaccaaaaacatatttaa 17157861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5975937 - 5975973
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaa 37  Q
    |||||||||||||||| |||| |||||||||||||||    
T  5975937 aaatcgcgcaaaatgttgggatcaaaaacatatttaa 5975973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 7645868 - 7645900
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||| |||||||||||||||||||||||    
T  7645868 gcaaaatgtcgggaccaaaaacatatttaaccc 7645900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33106967 - 33106931
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaa 37  Q
    |||||| |||||| |||||||||||||||||||||||    
T  33106967 aaatcgtgcaaaacgtagggaccaaaaacatatttaa 33106931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 31093478 - 31093517
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31093478 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 31093517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39402250 - 39402211
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  39402250 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 39402211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3879255 - 3879295
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  3879255 aaatcgcgcaaaatgtagggaccaaaaatatatttaaccca 3879295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31162903 - 31162943
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  31162903 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccca 31162943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 5746799 - 5746760
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  5746799 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 5746760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 5747243 - 5747282
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  5747243 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 5747282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 6543453 - 6543414
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  6543453 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 6543414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 28641199 - 28641160
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  28641199 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 28641160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21949438 - 21949400
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  21949438 aaatcgcgtaaaatgtagggaccaaaaacatatttaacc 21949400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3191836 - 3191795
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaacccat 42  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  3191836 aaatcgtgcaaaatgtagggactaaaaacatatttaacccat 3191795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 35373653 - 35373620
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  35373653 cgcaaaatgtagggaccaaaaacatatttaaccc 35373620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 87147 - 87179
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||||||||||||||||||    
T  87147 gcaaaatgtagggaccaaaaacatatttaaccc 87179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 119041 - 119009
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||||||||||||||||||    
T  119041 gcaaaatgtagggaccaaaaacatatttaaccc 119009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 120017 - 120049
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||||||||||||||||||    
T  120017 gcaaaatgtagggaccaaaaacatatttaaccc 120049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28641643 - 28641683
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||||| ||||||||||||||||| ||||||||||||||    
T  28641643 aaatcgcgtaaaatgtagggaccaaacacatatttaaccca 28641683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39402696 - 39402736
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  39402696 aaatcgtgtaaaatgtagggaccaaaaacatatttaaccca 39402736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 3192282 - 3192321
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||| |||||| |||||||||||||||||||||||||    
T  3192282 aaatcgcacaaaatatagggaccaaaaacatatttaaccc 3192321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 3878810 - 3878771
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  3878810 aaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 3878771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 14625160 - 14625121
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  14625160 aaattgcgtaaaatgtagggaccaaaaacatatttaaccc 14625121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 31162459 - 31162420
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  31162459 aaatcacgtaaaatgtagggaccaaaaacatatttaaccc 31162420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 4187893 - 4187927
Alignment:
Q  6 gcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||| |||||||||||||||||    
T  4187893 gcgcaaaatgtagggactaaaaacatatttaaccc 4187927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 31588405 - 31588451
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaacccattagtatatatg 53  Q
    ||||||||||| |||| ||||||||||||||||||||| ||| ||||    
T  31588405 cgcaaaatgtaaggactaaaaacatatttaacccattattatttatg 31588451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 21949882 - 21949919
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaac 38  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  21949882 aaatcgcgtaaaatgtagggaccaaaaacataattaac 21949919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 35383445 - 35383412
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||| ||||||||||||||||||    
T  35383445 cgcaaaatgtagggatcaaaaacatatttaaccc 35383412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 718283 - 718315
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||| ||||||||||||||||||||    
T  718283 gcaaaatgtaggaaccaaaaacatatttaaccc 718315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Complemental strand, 26338877 - 26338849
Alignment:
Q  16 tagggaccaaaaacatatttaacccatta 44  Q
    |||||||||||||||||||||||||||||    
T  26338877 tagggaccaaaaacatatttaacccatta 26338849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 34728984 - 34729012
Alignment:
Q  16 tagggaccaaaaacatatttaacccatta 44  Q
    |||||||||||||||||||||||||||||    
T  34728984 tagggaccaaaaacatatttaacccatta 34729012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4199937 - 4199976
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4199937 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 4199976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 27475428 - 27475389
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27475428 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 27475389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 34949794 - 34949755
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34949794 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 34949755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4199491 - 4199452
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  4199491 aaatcgtgcaaaatgtagggaccaaaaacatatttaaccc 4199452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22407325 - 22407364
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  22407325 aaattgcgcaaaatgtagggaccaaaaacatatttaaccc 22407364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 36899292 - 36899253
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  36899292 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 36899253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 45539691 - 45539730
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  45539691 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 45539730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 46690164 - 46690203
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  46690164 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 46690203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 20831162 - 20831194
Alignment:
Q  10 aaaatgtagggaccaaaaacatatttaacccat 42  Q
    |||||||||||||||||||||||||||||||||    
T  20831162 aaaatgtagggaccaaaaacatatttaacccat 20831194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 42606318 - 42606279
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  42606318 aaatcgcgtaaaatgtagggaccaaaaacaaatttaaccc 42606279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 45539247 - 45539208
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  45539247 aaatcgcgtaaaatgtagggaccaaaaacataattaaccc 45539208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 2388670 - 2388636
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatattt 35  Q
    |||||||| ||||||||||||||||||||||||||    
T  2388670 aaatcgcgtaaaatgtagggaccaaaaacatattt 2388636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 9218024 - 9217994
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaac 38  Q
    |||||||||||||||||||||||||||||||    
T  9218024 gcaaaatgtagggaccaaaaacatatttaac 9217994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 40
Target Start/End: Complemental strand, 20826757 - 20826727
Alignment:
Q  10 aaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||||||||||||||||    
T  20826757 aaaatgtagggaccaaaaacatatttaaccc 20826727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 40
Target Start/End: Complemental strand, 35300773 - 35300743
Alignment:
Q  10 aaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||||||||||||||||    
T  35300773 aaaatgtagggaccaaaaacatatttaaccc 35300743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 40
Target Start/End: Original strand, 42606771 - 42606801
Alignment:
Q  10 aaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||||||||||||||||    
T  42606771 aaaatgtagggaccaaaaacatatttaaccc 42606801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 2389123 - 2389156
Alignment:
Q  10 aaaatgtagggaccaaaaacatatttaacccatt 43  Q
    ||||| ||||||||||||||||||||||||||||    
T  2389123 aaaatatagggaccaaaaacatatttaacccatt 2389156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27013620 - 27013583
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaac 38  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  27013620 aaatcacgcaaaatgtaaggaccaaaaacatatttaac 27013583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 34950246 - 34950279
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccca 41  Q
    |||||| |||||||||||||||||||||||||||    
T  34950246 gcaaaacgtagggaccaaaaacatatttaaccca 34950279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 6471449 - 6471477
Alignment:
Q  16 tagggaccaaaaacatatttaacccatta 44  Q
    |||||||||||||||||||||||||||||    
T  6471449 tagggaccaaaaacatatttaacccatta 6471477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 7248245 - 7248217
Alignment:
Q  9 caaaatgtagggaccaaaaacatatttaa 37  Q
    |||||||||||||||||||||||||||||    
T  7248245 caaaatgtagggaccaaaaacatatttaa 7248217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 9218399 - 9218431
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    ||||||||||||||| |||||||||||||||||    
T  9218399 cgcaaaatgtagggagcaaaaacatatttaacc 9218431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 36899745 - 36899777
Alignment:
Q  10 aaaatgtagggaccaaaaacatatttaacccat 42  Q
    ||||| |||||||||||||||||||||||||||    
T  36899745 aaaatatagggaccaaaaacatatttaacccat 36899777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 37172286 - 37172254
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    ||||||||||| |||||||||||||||||||||    
T  37172286 cgcaaaatgtaaggaccaaaaacatatttaacc 37172254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 39903 - 39942
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  39903 aaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 39942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39459 - 39420
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  39459 aaatcgcataaaatgtagggaccaaaaacatatttaaccc 39420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 108007 - 108040
Alignment:
Q  7 cgcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  108007 cgcaaaatgtagggaccaaaaacatatttaaccc 108040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 107933 - 107895
Alignment:
Q  1 aaatcgcgcaaaatgtagggaccaaaaacatatttaacc 39  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  107933 aaatcacggaaaatgtagggaccaaaaacatatttaacc 107895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 33053 - 33085
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||||||||||||||||||    
T  33053 gcaaaatgtagggaccaaaaacatatttaaccc 33085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 29305 - 29273
Alignment:
Q  8 gcaaaatgtagggaccaaaaacatatttaaccc 40  Q
    |||||||||||||||||| ||||||||||||||    
T  29305 gcaaaatgtagggaccaataacatatttaaccc 29273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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