View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10404_3 (Length: 336)

Name: NF10404_3
Description: NF10404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10404_3
NF10404_3
[»] scaffold0338 (2 HSPs)
scaffold0338 (181-327)||(6378-6523)
scaffold0338 (63-126)||(6492-6555)
[»] chr8 (65 HSPs)
chr8 (180-327)||(39657741-39657888)
chr8 (180-314)||(2751112-2751246)
chr8 (180-327)||(1209652-1209797)
chr8 (180-327)||(4835551-4835707)
chr8 (180-327)||(4840996-4841152)
chr8 (186-327)||(8551189-8551339)
chr8 (227-327)||(1672592-1672692)
chr8 (56-126)||(2751214-2751284)
chr8 (56-126)||(4835513-4835583)
chr8 (55-126)||(41451214-41451285)
chr8 (56-126)||(39657703-39657773)
chr8 (55-126)||(1149909-1149980)
chr8 (64-126)||(1209765-1209827)
chr8 (56-126)||(19784380-19784450)
chr8 (56-126)||(34633208-34633278)
chr8 (56-125)||(15227140-15227209)
chr8 (56-125)||(30414024-30414093)
chr8 (56-126)||(10237463-10237533)
chr8 (55-127)||(7059143-7059215)
chr8 (55-126)||(41099291-41099365)
chr8 (72-126)||(4840974-4841028)
chr8 (180-268)||(7059079-7059176)
chr8 (56-105)||(9853256-9853305)
chr8 (53-105)||(23567478-23567530)
chr8 (56-105)||(15259850-15259899)
chr8 (60-105)||(15808884-15808929)
chr8 (60-105)||(17656617-17656662)
chr8 (279-327)||(7059039-7059087)
chr8 (180-220)||(7857781-7857821)
chr8 (56-104)||(35301624-35301672)
chr8 (180-220)||(41099283-41099323)
chr8 (62-103)||(185882-185923)
chr8 (60-105)||(17792892-17792937)
chr8 (179-212)||(19784380-19784413)
chr8 (60-105)||(23347721-23347766)
chr8 (60-105)||(35448610-35448655)
chr8 (62-103)||(40022389-40022430)
chr8 (179-212)||(41451214-41451247)
chr8 (180-220)||(43690741-43690781)
chr8 (63-102)||(1208716-1208755)
chr8 (292-327)||(2750844-2750879)
chr8 (292-327)||(4835807-4835842)
chr8 (292-327)||(4841252-4841287)
chr8 (61-104)||(10585860-10585903)
chr8 (62-105)||(23397443-23397486)
chr8 (180-211)||(30414024-30414055)
chr8 (63-102)||(32987464-32987503)
chr8 (63-102)||(39021982-39022021)
chr8 (63-105)||(1672931-1672973)
chr8 (297-327)||(4835955-4835985)
chr8 (297-327)||(4841400-4841430)
chr8 (63-105)||(27506708-27506750)
chr8 (62-104)||(34647172-34647214)
chr8 (63-101)||(42433708-42433746)
chr8 (190-235)||(35448483-35448528)
chr8 (180-212)||(1149948-1149980)
chr8 (292-324)||(1209524-1209556)
chr8 (94-126)||(7857789-7857821)
chr8 (184-220)||(10237455-10237491)
chr8 (183-211)||(15227140-15227168)
chr8 (60-92)||(15809853-15809885)
chr8 (60-104)||(18757329-18757373)
chr8 (61-105)||(23567643-23567687)
chr8 (180-212)||(34633246-34633278)
chr8 (56-104)||(39023000-39023048)
[»] chr3 (66 HSPs)
chr3 (180-327)||(19384414-19384571)
chr3 (184-327)||(51361560-51361703)
chr3 (180-309)||(31853063-31853197)
chr3 (180-327)||(50755046-50755203)
chr3 (180-327)||(7044390-7044546)
chr3 (252-326)||(52986596-52986670)
chr3 (55-126)||(51361517-51361588)
chr3 (56-126)||(26662425-26662495)
chr3 (55-125)||(3475293-3475363)
chr3 (56-126)||(6097571-6097641)
chr3 (56-126)||(9595867-9595937)
chr3 (56-126)||(19384376-19384446)
chr3 (56-126)||(30947798-30947868)
chr3 (56-126)||(54379271-54379341)
chr3 (56-125)||(19284781-19284850)
chr3 (63-126)||(50755171-50755234)
chr3 (56-126)||(9106376-9106446)
chr3 (56-125)||(10986462-10986531)
chr3 (64-126)||(2941821-2941883)
chr3 (56-126)||(26960735-26960805)
chr3 (56-120)||(46237645-46237709)
chr3 (56-126)||(33413899-33413970)
chr3 (56-105)||(8719137-8719186)
chr3 (56-105)||(9071024-9071073)
chr3 (55-105)||(16276663-16276713)
chr3 (179-220)||(26662462-26662503)
chr3 (180-220)||(9595905-9595945)
chr3 (56-104)||(34562394-34562442)
chr3 (56-126)||(47335141-47335216)
chr3 (54-105)||(50416564-50416615)
chr3 (84-126)||(31853165-31853207)
chr3 (55-105)||(36185905-36185955)
chr3 (60-105)||(8036799-8036844)
chr3 (190-235)||(47729118-47729163)
chr3 (60-105)||(50416479-50416524)
chr3 (180-220)||(2941851-2941891)
chr3 (180-212)||(6097609-6097641)
chr3 (180-220)||(9106368-9106408)
chr3 (180-220)||(19284772-19284812)
chr3 (180-220)||(26960727-26960767)
chr3 (180-212)||(30947836-30947868)
chr3 (180-220)||(47335133-47335173)
chr3 (180-212)||(54379271-54379303)
chr3 (180-211)||(3475332-3475363)
chr3 (292-327)||(7044652-7044687)
chr3 (292-327)||(19384666-19384701)
chr3 (63-102)||(19385334-19385373)
chr3 (60-107)||(47225759-47225806)
chr3 (63-102)||(51362457-51362496)
chr3 (55-105)||(12974006-12974056)
chr3 (60-105)||(8036989-8037034)
chr3 (60-105)||(12974191-12974235)
chr3 (60-105)||(19012562-19012607)
chr3 (190-235)||(23700039-23700084)
chr3 (190-235)||(23718494-23718539)
chr3 (190-235)||(23736950-23736995)
chr3 (60-105)||(36185725-36185770)
chr3 (55-104)||(41191403-41191452)
chr3 (63-104)||(47924367-47924408)
chr3 (63-103)||(8718108-8718148)
chr3 (63-103)||(9069995-9070035)
chr3 (60-88)||(11065433-11065461)
chr3 (60-92)||(27068531-27068563)
chr3 (63-103)||(27446215-27446255)
chr3 (180-212)||(33413938-33413970)
chr3 (180-220)||(46237683-46237723)
[»] chr2 (61 HSPs)
chr2 (180-327)||(18297201-18297353)
chr2 (183-327)||(2264508-2264662)
chr2 (180-327)||(4578592-4578749)
chr2 (180-327)||(25193845-25194002)
chr2 (222-327)||(4280800-4280905)
chr2 (222-327)||(25995910-25996015)
chr2 (180-308)||(14550465-14550602)
chr2 (224-327)||(43823705-43823808)
chr2 (227-319)||(36635867-36635959)
chr2 (253-327)||(4962615-4962689)
chr2 (55-126)||(39355144-39355215)
chr2 (56-126)||(7487141-7487211)
chr2 (56-126)||(18297163-18297233)
chr2 (56-126)||(1292066-1292136)
chr2 (62-126)||(34464820-34464884)
chr2 (56-126)||(8149940-8150010)
chr2 (56-126)||(8154564-8154634)
chr2 (56-126)||(15016453-15016523)
chr2 (262-327)||(28478051-28478116)
chr2 (56-126)||(25193970-25194040)
chr2 (180-220)||(39355136-39355176)
chr2 (292-327)||(4578844-4578879)
chr2 (181-220)||(8149932-8149971)
chr2 (181-220)||(8154556-8154595)
chr2 (56-103)||(41345082-41345129)
chr2 (60-103)||(42364491-42364534)
chr2 (55-105)||(31783787-31783837)
chr2 (183-220)||(18762938-18762975)
chr2 (60-105)||(30777294-30777339)
chr2 (180-212)||(7487179-7487211)
chr2 (180-220)||(9143686-9143726)
chr2 (180-220)||(15016491-15016531)
chr2 (60-104)||(20661395-20661439)
chr2 (180-219)||(1292104-1292143)
chr2 (292-327)||(4578974-4579009)
chr2 (60-103)||(12449053-12449096)
chr2 (292-327)||(14550708-14550743)
chr2 (60-91)||(15150305-15150336)
chr2 (292-327)||(18297461-18297496)
chr2 (63-102)||(18298130-18298169)
chr2 (84-127)||(18762945-18762988)
chr2 (60-103)||(24183599-24183642)
chr2 (63-102)||(25192899-25192938)
chr2 (292-327)||(25193583-25193618)
chr2 (292-327)||(25193714-25193749)
chr2 (62-105)||(34726605-34726648)
chr2 (55-105)||(22596504-22596554)
chr2 (55-105)||(31711504-31711554)
chr2 (55-105)||(34726796-34726846)
chr2 (60-105)||(16111705-16111750)
chr2 (60-105)||(22596303-22596348)
chr2 (190-230)||(25996029-25996070)
chr2 (60-105)||(42364693-42364738)
chr2 (60-105)||(43823875-43823920)
chr2 (60-105)||(44915491-44915536)
chr2 (94-126)||(4578592-4578624)
chr2 (63-103)||(19246664-19246704)
chr2 (61-105)||(20661595-20661639)
chr2 (60-92)||(31783998-31784030)
chr2 (180-212)||(34464820-34464852)
chr2 (55-103)||(37867148-37867196)
[»] chr4 (90 HSPs)
chr4 (180-323)||(45256758-45256906)
chr4 (180-319)||(26577294-26577438)
chr4 (180-327)||(10473502-10473659)
chr4 (180-327)||(51836360-51836510)
chr4 (180-327)||(638848-639005)
chr4 (180-320)||(38245784-38245929)
chr4 (222-327)||(48077029-48077134)
chr4 (239-327)||(50644558-50644646)
chr4 (54-126)||(15051021-15051093)
chr4 (56-126)||(45256874-45256944)
chr4 (56-126)||(11786083-11786153)
chr4 (56-126)||(11798250-11798320)
chr4 (56-126)||(49425944-49426014)
chr4 (262-327)||(9551742-9551807)
chr4 (54-126)||(10473627-10473699)
chr4 (62-126)||(13635618-13635682)
chr4 (62-126)||(30597808-30597872)
chr4 (63-127)||(49492406-49492470)
chr4 (64-126)||(638973-639035)
chr4 (57-126)||(26577257-26577326)
chr4 (62-123)||(50644652-50644713)
chr4 (55-126)||(53441429-53441500)
chr4 (56-126)||(27865624-27865694)
chr4 (58-126)||(51836324-51836392)
chr4 (70-126)||(51921166-51921222)
chr4 (54-105)||(22180199-22180250)
chr4 (222-268)||(6385464-6385510)
chr4 (72-126)||(35291451-35291505)
chr4 (56-126)||(46672547-46672617)
chr4 (63-105)||(53526253-53526295)
chr4 (60-105)||(25715727-25715772)
chr4 (56-105)||(30358837-30358886)
chr4 (60-105)||(54895403-54895448)
chr4 (180-220)||(13635650-13635690)
chr4 (60-104)||(36309618-36309662)
chr4 (180-220)||(49425982-49426022)
chr4 (180-220)||(49492437-49492477)
chr4 (180-220)||(51921190-51921230)
chr4 (181-220)||(27865663-27865702)
chr4 (180-219)||(35291473-35291512)
chr4 (54-105)||(53865243-53865294)
chr4 (55-105)||(21995664-21995714)
chr4 (51-105)||(47567886-47567940)
chr4 (56-105)||(1728620-1728669)
chr4 (60-105)||(8165761-8165806)
chr4 (60-105)||(17109918-17109963)
chr4 (180-217)||(30597803-30597840)
chr4 (60-105)||(30779342-30779387)
chr4 (60-105)||(36924240-36924285)
chr4 (60-105)||(37059710-37059755)
chr4 (60-104)||(1492671-1492715)
chr4 (180-212)||(1621985-1622017)
chr4 (60-104)||(4169429-4169473)
chr4 (279-327)||(6385502-6385550)
chr4 (180-212)||(11786083-11786115)
chr4 (180-212)||(11798250-11798282)
chr4 (180-220)||(15051061-15051101)
chr4 (56-104)||(21098133-21098181)
chr4 (60-104)||(33819690-33819734)
chr4 (60-103)||(2124343-2124386)
chr4 (60-103)||(6841820-6841863)
chr4 (63-102)||(22181264-22181303)
chr4 (62-105)||(25715644-25715687)
chr4 (63-102)||(27764247-27764286)
chr4 (60-103)||(31763110-31763153)
chr4 (63-102)||(36621720-36621759)
chr4 (63-102)||(45255982-45256021)
chr4 (292-327)||(45256611-45256646)
chr4 (63-102)||(50643750-50643789)
chr4 (180-219)||(50644642-50644681)
chr4 (62-105)||(54895583-54895626)
chr4 (54-104)||(8157290-8157340)
chr4 (182-220)||(53441421-53441459)
chr4 (60-105)||(2124545-2124590)
chr4 (60-105)||(12722938-12722983)
chr4 (60-105)||(17109718-17109763)
chr4 (190-235)||(21098068-21098113)
chr4 (190-235)||(25573279-25573324)
chr4 (190-235)||(27765225-27765269)
chr4 (64-105)||(36309419-36309460)
chr4 (60-105)||(43374446-43374491)
chr4 (60-105)||(48076911-48076956)
chr4 (94-126)||(1621985-1622017)
chr4 (190-244)||(9551625-9551678)
chr4 (53-93)||(9967882-9967922)
chr4 (60-92)||(12722736-12722768)
chr4 (190-230)||(24687284-24687324)
chr4 (66-102)||(26447431-26447467)
chr4 (60-92)||(33883293-33883325)
chr4 (180-212)||(46672547-46672579)
[»] scaffold0238 (3 HSPs)
scaffold0238 (180-327)||(24362-24507)
scaffold0238 (292-327)||(24612-24647)
scaffold0238 (63-102)||(25251-25290)
[»] chr7 (62 HSPs)
chr7 (180-327)||(48691904-48692061)
chr7 (181-327)||(46572608-46572764)
chr7 (181-327)||(15973894-15974050)
chr7 (222-327)||(44140171-44140276)
chr7 (180-327)||(48306207-48306363)
chr7 (56-126)||(763806-763876)
chr7 (56-126)||(30884109-30884179)
chr7 (180-270)||(34228638-34228725)
chr7 (54-126)||(46358629-46358701)
chr7 (55-126)||(41910998-41911069)
chr7 (55-126)||(48692029-48692100)
chr7 (180-279)||(32685877-32685986)
chr7 (56-126)||(46572569-46572639)
chr7 (56-126)||(47340256-47340326)
chr7 (56-125)||(35737058-35737127)
chr7 (56-126)||(31660178-31660248)
chr7 (56-126)||(32685839-32685909)
chr7 (57-126)||(15973856-15973925)
chr7 (62-126)||(16933136-16933200)
chr7 (62-126)||(16938519-16938583)
chr7 (56-110)||(34228600-34228654)
chr7 (56-104)||(11732037-11732085)
chr7 (179-220)||(763798-763839)
chr7 (57-109)||(46025056-46025108)
chr7 (180-220)||(46358621-46358661)
chr7 (180-220)||(47340248-47340288)
chr7 (55-103)||(48830601-48830649)
chr7 (63-101)||(25778844-25778882)
chr7 (60-105)||(5728880-5728925)
chr7 (60-105)||(6620618-6620663)
chr7 (60-105)||(26945714-26945759)
chr7 (180-229)||(31660161-31660210)
chr7 (60-105)||(38837729-38837774)
chr7 (180-229)||(41911037-41911086)
chr7 (60-105)||(44426597-44426642)
chr7 (60-105)||(45478514-45478559)
chr7 (180-220)||(30884147-30884187)
chr7 (180-220)||(35737049-35737089)
chr7 (190-230)||(46345907-46345947)
chr7 (292-327)||(15974146-15974181)
chr7 (63-102)||(15974955-15974994)
chr7 (63-102)||(30428880-30428919)
chr7 (190-229)||(44140117-44140156)
chr7 (60-103)||(46004537-46004580)
chr7 (63-102)||(46024034-46024073)
chr7 (292-327)||(48691773-48691808)
chr7 (63-105)||(46004343-46004385)
chr7 (190-240)||(46024991-46025041)
chr7 (52-89)||(6620813-6620850)
chr7 (60-105)||(7843518-7843563)
chr7 (56-101)||(12286723-12286768)
chr7 (190-235)||(16932539-16932584)
chr7 (190-235)||(16937922-16937967)
chr7 (60-105)||(31365270-31365315)
chr7 (56-105)||(33798733-33798782)
chr7 (60-105)||(34227675-34227720)
chr7 (60-105)||(43742248-43742293)
chr7 (60-105)||(44426799-44426844)
chr7 (180-212)||(16933168-16933200)
chr7 (180-212)||(16938551-16938583)
chr7 (56-104)||(24360756-24360804)
chr7 (55-91)||(41065762-41065798)
[»] chr1 (75 HSPs)
chr1 (180-327)||(23174435-23174592)
chr1 (180-327)||(11422434-11422581)
chr1 (184-326)||(180710-180860)
chr1 (180-327)||(8401435-8401597)
chr1 (180-327)||(34370392-34370528)
chr1 (191-325)||(16116884-16117027)
chr1 (239-327)||(23921039-23921127)
chr1 (222-327)||(35197132-35197237)
chr1 (56-126)||(16976064-16976134)
chr1 (58-126)||(23174399-23174467)
chr1 (55-126)||(23817419-23817490)
chr1 (56-126)||(24636035-24636105)
chr1 (56-126)||(48762218-48762288)
chr1 (180-256)||(4097142-4097223)
chr1 (54-126)||(11422549-11422621)
chr1 (62-126)||(49936830-49936894)
chr1 (56-126)||(19897647-19897717)
chr1 (56-126)||(21641589-21641659)
chr1 (56-126)||(23920966-23921036)
chr1 (56-126)||(25888916-25888985)
chr1 (56-126)||(43452651-43452721)
chr1 (56-127)||(180831-180902)
chr1 (55-126)||(20434608-20434679)
chr1 (56-126)||(4097105-4097174)
chr1 (56-125)||(6314226-6314295)
chr1 (63-126)||(18618944-18619006)
chr1 (180-235)||(21641627-21641682)
chr1 (57-104)||(23319011-23319058)
chr1 (56-103)||(45890595-45890642)
chr1 (56-105)||(18057809-18057858)
chr1 (85-126)||(34370496-34370537)
chr1 (180-220)||(18618936-18618976)
chr1 (180-220)||(24636027-24636067)
chr1 (60-104)||(32143770-32143814)
chr1 (180-220)||(49936862-49936902)
chr1 (180-220)||(50351904-50351944)
chr1 (82-126)||(50351912-50351956)
chr1 (60-103)||(11354513-11354556)
chr1 (181-220)||(20434648-20434687)
chr1 (180-219)||(23817412-23817451)
chr1 (60-103)||(29945418-29945461)
chr1 (60-105)||(9628599-9628644)
chr1 (56-105)||(21255835-21255884)
chr1 (60-105)||(33156991-33157036)
chr1 (60-105)||(42134133-42134178)
chr1 (180-220)||(16976056-16976096)
chr1 (60-92)||(24368625-24368657)
chr1 (180-220)||(25888953-25888993)
chr1 (180-220)||(43452643-43452683)
chr1 (180-212)||(48762256-48762288)
chr1 (292-327)||(180438-180473)
chr1 (292-327)||(180578-180613)
chr1 (60-103)||(1395353-1395396)
chr1 (60-103)||(10974632-10974675)
chr1 (60-103)||(14229171-14229214)
chr1 (62-105)||(17893073-17893116)
chr1 (60-103)||(17893275-17893318)
chr1 (63-102)||(18056791-18056830)
chr1 (180-219)||(23921004-23921043)
chr1 (56-103)||(31084404-31084451)
chr1 (60-101)||(9041055-9041096)
chr1 (60-105)||(12796422-12796467)
chr1 (60-105)||(14229361-14229406)
chr1 (60-105)||(18928955-18929000)
chr1 (190-235)||(23319078-23319123)
chr1 (60-105)||(31763973-31764018)
chr1 (60-105)||(32595103-32595148)
chr1 (64-105)||(45849111-45849152)
chr1 (190-235)||(45890529-45890574)
chr1 (184-220)||(6314217-6314253)
chr1 (82-126)||(8401423-8401467)
chr1 (60-92)||(17811296-17811328)
chr1 (180-212)||(19897685-19897717)
chr1 (60-104)||(42133943-42133987)
chr1 (60-92)||(49992517-49992549)
[»] chr6 (40 HSPs)
chr6 (186-327)||(24736610-24736748)
chr6 (180-327)||(878255-878401)
chr6 (222-327)||(18612184-18612289)
chr6 (180-327)||(33345369-33345520)
chr6 (191-327)||(29163552-29163698)
chr6 (55-126)||(34869949-34870020)
chr6 (56-126)||(1449651-1449721)
chr6 (56-126)||(6900912-6900982)
chr6 (56-126)||(15493283-15493353)
chr6 (56-126)||(878369-878439)
chr6 (56-126)||(7089191-7089261)
chr6 (180-235)||(35121475-35121529)
chr6 (54-103)||(7765406-7765455)
chr6 (60-105)||(22857677-22857722)
chr6 (180-220)||(6900904-6900944)
chr6 (180-220)||(7089183-7089223)
chr6 (180-220)||(15493275-15493315)
chr6 (62-126)||(31216771-31216835)
chr6 (186-224)||(24736574-24736612)
chr6 (54-103)||(10588955-10589004)
chr6 (63-104)||(15034992-15035033)
chr6 (56-101)||(18755658-18755703)
chr6 (180-220)||(1449643-1449683)
chr6 (180-220)||(1536821-1536861)
chr6 (190-230)||(18612303-18612343)
chr6 (60-104)||(19284370-19284414)
chr6 (60-104)||(21384990-21385034)
chr6 (292-327)||(878118-878153)
chr6 (63-102)||(12394399-12394438)
chr6 (60-103)||(22857487-22857530)
chr6 (292-327)||(24736856-24736891)
chr6 (62-105)||(30909439-30909482)
chr6 (81-120)||(33345356-33345395)
chr6 (63-102)||(33346390-33346429)
chr6 (81-120)||(35121503-35121542)
chr6 (55-105)||(25119470-25119520)
chr6 (297-327)||(33345621-33345651)
chr6 (60-105)||(7371098-7371143)
chr6 (55-104)||(10698571-10698620)
chr6 (180-229)||(34869988-34870037)
[»] chr5 (51 HSPs)
chr5 (180-327)||(34330045-34330197)
chr5 (222-327)||(16667775-16667880)
chr5 (182-317)||(28069282-28069429)
chr5 (54-126)||(26637722-26637794)
chr5 (56-126)||(14394577-14394647)
chr5 (56-126)||(14940243-14940313)
chr5 (54-126)||(13553092-13553164)
chr5 (55-126)||(37456789-37456860)
chr5 (191-282)||(2826098-2826199)
chr5 (56-126)||(3883922-3883992)
chr5 (56-127)||(15416772-15416843)
chr5 (55-126)||(30783567-30783637)
chr5 (56-126)||(28069242-28069312)
chr5 (60-105)||(20134399-20134444)
chr5 (57-105)||(13363794-13363842)
chr5 (180-220)||(14394569-14394609)
chr5 (180-220)||(14940281-14940321)
chr5 (180-220)||(15416765-15416805)
chr5 (190-230)||(16667721-16667761)
chr5 (55-103)||(39086511-39086559)
chr5 (181-220)||(37456781-37456820)
chr5 (60-103)||(39166342-39166385)
chr5 (56-98)||(23948588-23948630)
chr5 (54-103)||(3340583-3340632)
chr5 (60-105)||(22695540-22695585)
chr5 (60-105)||(39861780-39861825)
chr5 (61-105)||(11660982-11661026)
chr5 (180-212)||(26637762-26637794)
chr5 (63-102)||(13362777-13362816)
chr5 (60-103)||(15559048-15559091)
chr5 (63-102)||(25017236-25017275)
chr5 (292-327)||(28069516-28069551)
chr5 (63-102)||(28070172-28070211)
chr5 (292-327)||(34329914-34329949)
chr5 (60-103)||(36864270-36864313)
chr5 (55-105)||(20696327-20696377)
chr5 (63-105)||(22830788-22830830)
chr5 (60-105)||(3340779-3340824)
chr5 (60-105)||(20134198-20134243)
chr5 (62-103)||(23155526-23155567)
chr5 (56-125)||(34330166-34330230)
chr5 (60-105)||(35662066-35662111)
chr5 (60-105)||(35662233-35662278)
chr5 (55-104)||(36864061-36864110)
chr5 (63-104)||(39086707-39086748)
chr5 (180-212)||(3883960-3883992)
chr5 (60-92)||(11660792-11660824)
chr5 (61-105)||(22671997-22672041)
chr5 (60-92)||(25545585-25545617)
chr5 (180-220)||(30783559-30783598)
chr5 (61-105)||(39861579-39861623)
[»] scaffold0074 (2 HSPs)
scaffold0074 (55-126)||(24383-24454)
scaffold0074 (180-229)||(24366-24415)
[»] scaffold0571 (2 HSPs)
scaffold0571 (56-126)||(540-610)
scaffold0571 (180-220)||(578-618)
[»] scaffold0045 (2 HSPs)
scaffold0045 (62-126)||(33793-33857)
scaffold0045 (180-220)||(33785-33825)
[»] scaffold0050 (1 HSPs)
scaffold0050 (62-101)||(20978-21017)
[»] scaffold0189 (1 HSPs)
scaffold0189 (63-101)||(11210-11248)
[»] scaffold0581 (2 HSPs)
scaffold0581 (81-126)||(8333-8378)
scaffold0581 (180-212)||(8346-8378)
[»] scaffold0516 (1 HSPs)
scaffold0516 (60-105)||(1248-1293)
[»] scaffold0249 (2 HSPs)
scaffold0249 (60-105)||(23543-23588)
scaffold0249 (64-104)||(23736-23776)
[»] scaffold0194 (2 HSPs)
scaffold0194 (56-105)||(28675-28724)
scaffold0194 (190-235)||(28611-28656)
[»] scaffold0031 (1 HSPs)
scaffold0031 (55-92)||(80880-80917)
[»] scaffold0004 (1 HSPs)
scaffold0004 (63-104)||(96001-96042)
[»] scaffold0102 (1 HSPs)
scaffold0102 (60-104)||(33615-33659)
[»] scaffold0129 (1 HSPs)
scaffold0129 (60-103)||(20122-20165)
[»] scaffold0019 (1 HSPs)
scaffold0019 (60-103)||(72704-72747)
[»] scaffold0009 (2 HSPs)
scaffold0009 (58-105)||(202909-202956)
scaffold0009 (64-105)||(51908-51949)
[»] scaffold0117 (1 HSPs)
scaffold0117 (60-105)||(17856-17900)


Alignment Details
Target: scaffold0338 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 181 - 327
Target Start/End: Complemental strand, 6523 - 6378
Alignment:
Q  181 tgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcat 280  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  6523 tgcataaatcccaacataattgcttcctacacccccaaaggaaaccaaacaaaac-aaccaaacgcggaaagaaactgaatcatcaccgtcgttcatcat 6425  T
Q  281 catcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  6424 catcaccactggaatcttcaatctcatcatcaacaccgtcgttcatc 6378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 6555 - 6492
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  6555 gttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacac 6492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 9e-64; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 180 - 327
Target Start/End: Original strand, 39657741 - 39657888
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatca 279  Q
    ||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39657741 gtgcataaatcccaacataattgcttcctacacccctaaaggaaactaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaacgtcgttcatca 39657840  T
Q  280 tcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  39657841 tcatcaccactggaatcttcaatctcatcatcaacaccatcgttcatc 39657888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 180 - 314
Target Start/End: Complemental strand, 2751246 - 2751112
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatca 279  Q
    |||||| |||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2751246 gtgcatgaatcccaacataattgcttcctacacccccaaacgaaatcaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatca 2751147  T
Q  280 tcatcaccactggaattttcaatctcatcatcaac 314  Q
    |||||||||||||||| ||||||||||||||||||    
T  2751146 tcatcaccactggaatcttcaatctcatcatcaac 2751112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 1209797 - 1209652
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaa-ggaaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatc 278  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  1209797 gtgcataaatcccaacataattgcttcctacacccccaaaaggaaaccaaacaaaacgaaccaaacgcggaaacaaacagaaccatcaccgtcgttcatc 1209698  T
Q  279 atcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
       ||||||| |||||||||||||||||||||||||| |||||||||||    
T  1209697 ---atcaccattggaattttcaatctcatcatcaacatcgtcgttcatc 1209652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 180 - 327
Target Start/End: Original strand, 4835551 - 4835707
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaac----------gaaccaaacgcggaaacaaactgaatcatcaccg 269  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||          |||||||| |||||| ||||||||||||||||||    
T  4835551 gtgcataaatcccaacataattgcttcctacacccccaaagaaaaccaaacaaaacaaaacaaaacgaaccaaatgcggaa-caaactgaatcatcaccg 4835649  T
Q  270 tcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4835650 tcgttcatcatcatcaccactggaatcttcaatctcatcatcaacaccgtcgttcatc 4835707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 180 - 327
Target Start/End: Original strand, 4840996 - 4841152
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaac----------gaaccaaacgcggaaacaaactgaatcatcaccg 269  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||          |||||||| |||||| ||||||||||||||||||    
T  4840996 gtgcataaatcccaacataattgcttcctacacccccaaagaaaaccaaacaaaacaaaacaaaacgaaccaaatgcggaa-caaactgaatcatcaccg 4841094  T
Q  270 tcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4841095 tcgttcatcatcatcaccactggaatcttcaatctcatcatcaacaccgtcgttcatc 4841152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 186 - 327
Target Start/End: Complemental strand, 8551339 - 8551189
Alignment:
Q  186 aaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaac----------gaaccaaacgcggaaacaaactgaatcatcaccgtcgttc 275  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||          ||||||||| ||||||||||||||||||||||||||||||    
T  8551339 aaatcccaacataattgcttc-tacacccccaaaggaaaccaaacaaaacaaaacaaaacgaaccaaacacggaaacaaactgaatcatcaccgtcgttc 8551241  T
Q  276 atcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||| ||| ||||||||||  |||||||||||||||||||    
T  8551240 atcatcatcaccactgaaatattcaatctcaatatcaacaccgtcgttcatc 8551189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 1672692 - 1672592
Alignment:
Q  227 aaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcat 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| || |||||||| ||||||||||||||||||    
T  1672692 aaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatcaacaccggaatctttaatctcatgatcaacaccgtcgttcat 1672593  T
Q  327 c 327  Q
    |    
T  1672592 c 1672592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 2751284 - 2751214
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  2751284 gggagcggttatggtgcataagaaaatccttatgcaccgtgcatgaatcccaacataattgcttcctacac 2751214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 4835513 - 4835583
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  4835513 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 4835583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 41451285 - 41451214
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41451285 tgggagtggttatggtgtataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacac 41451214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 39657703 - 39657773
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||| ||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  39657703 gggatcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 39657773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 1149909 - 1149980
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||||| | ||||||||||||||||||||    
T  1149909 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacataattgcttcctacac 1149980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 1209827 - 1209765
Alignment:
Q  64 ttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  1209827 ttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 1209765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 19784450 - 19784380
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| ||||||| |||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  19784450 gggagtggttatgatgcataaggaaatccttatgcattgtgcataaatcccaacataattgcttcctacac 19784380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 34633208 - 34633278
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||| |||||    
T  34633208 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcttacac 34633278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 15227209 - 15227140
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctaca 125  Q
    ||||| |||||||||||||||| |||||||||||||| || ||||||||| |||||||||||||||||||    
T  15227209 gggagtggttatggtgcataaggaaatccttatgcaccgtacataaatcccaacataattgcttcctaca 15227140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 30414093 - 30414024
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctaca 125  Q
    ||||| |||||||||||||||| ||||| |||||||| |||||||||||| |||||||||||||||||||    
T  30414093 gggagtggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaacataattgcttcctaca 30414024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 10237533 - 10237463
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| ||| |||||||| ||||||||||||| ||||||    
T  10237533 gggagtggttatggtgcataaggaaatccttatgcaccgtgtataaatcccaacataattgctttctacac 10237463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 7059215 - 7059143
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacact 127  Q
    ||||| ||||||||||||||||| ||||| |||||||| |||||||||| | |||||||||| ||||||||||    
T  7059215 tgggatcggttatggtgcataaggaaatcattatgcaccgtgcataaattccaacataattgtttcctacact 7059143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 41099365 - 41099291
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatc---cttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||| |||||||||||||||| |||||   ||||||||| |||||||||||| ||||||||||||||||||||    
T  41099365 tgggagtggttatggtgcataaggaaatcatccttatgcaccgtgcataaatcccaacataattgcttcctacac 41099291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 4840974 - 4841028
Alignment:
Q  72 cataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  4840974 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 4841028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 180 - 268
Target Start/End: Complemental strand, 7059176 - 7059079
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaac---------aaaacgaaccaaacgcggaaacaaactgaatcatcacc 268  Q
    |||||||||| |||||||||||| |||||||||| |||||||||| |||||         |||||||||||||| |||||| ||||||||||||||||    
T  7059176 gtgcataaattccaacataattgtttcctacacttccaaaggaaatcaaacaaaacaaaaaaaacgaaccaaacacggaaataaactgaatcatcacc 7059079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 9853305 - 9853256
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  9853305 gggagtggttatggtgcataaaaaaatccttatgcactgtgcataaatcc 9853256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 23567478 - 23567530
Alignment:
Q  53 cttgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||| |||||||||||||||||| ||||||||||||||| |||||||||||    
T  23567478 cttgggtgcggttatggtgcataaggaaatccttatgcactctgcataaatcc 23567530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 15259850 - 15259899
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  15259850 gggagcggttatggggcataaggaaatccttatgcaccgtgcataaatcc 15259899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 15808884 - 15808929
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  15808884 gcggttatggtgcataagaaaatccttatgcaccctgcataaatcc 15808929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 17656617 - 17656662
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||    
T  17656617 gcggttatggtgcataaggaaatccttatgcactctgcataaatcc 17656662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 7059087 - 7059039
Alignment:
Q  279 atcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||||||||||| || ||||||||||||||||| ||||||||||    
T  7059087 atcatcaccactggaatcttgaatctcatcatcaacactgtcgttcatc 7059039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 7857821 - 7857781
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  7857821 gtgcataaatcccaacataattgcttcctacacccccaaag 7857781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 35301624 - 35301672
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||    
T  35301624 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 35301672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 41099323 - 41099283
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  41099323 gtgcataaatcccaacataattgcttcctacacccccaaag 41099283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 185882 - 185923
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  185882 ggttatggtgcataaggaaatccttatgcactctgcataaat 185923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 17792937 - 17792892
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  17792937 gcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 17792892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 19784413 - 19784380
Alignment:
Q  179 tgtgcataaatcccaacataattgcttcctacac 212  Q
    ||||||||||||||||||||||||||||||||||    
T  19784413 tgtgcataaatcccaacataattgcttcctacac 19784380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 23347766 - 23347721
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||||||||||||||| ||  |||||||||||    
T  23347766 gcggttatggtgcataagaaaatccttatgaaccctgcataaatcc 23347721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 35448655 - 35448610
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  35448655 gcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 35448610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 40022389 - 40022430
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||| |||||||||||||||||| ||||||    
T  40022389 ggttatggtgcataaggaaatccttatgcactgtgtataaat 40022430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 41451247 - 41451214
Alignment:
Q  179 tgtgcataaatcccaacataattgcttcctacac 212  Q
    ||||||||||||||||||||||||||||||||||    
T  41451247 tgtgcataaatcccaacataattgcttcctacac 41451214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 43690781 - 43690741
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  43690781 gtgcataaatcccaacataattgctttctacacccccaaag 43690741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 1208716 - 1208755
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  1208716 gttatggtgcataaggaaatccttatgcaccgtgcataaa 1208755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Complemental strand, 2750879 - 2750844
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  2750879 gaatcttcaatctcatcatcaacaccgtcgttcatc 2750844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 4835807 - 4835842
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  4835807 gaatcttcaatctcatcatcaacaccgtcgttcatc 4835842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 4841252 - 4841287
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  4841252 gaatcttcaatctcatcatcaacaccgtcgttcatc 4841287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 10585860 - 10585903
Alignment:
Q  61 cggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||| |||||||||||||||||||||||||  ||||||||||    
T  10585860 cggttacggtgcataagaaaatccttatgcaccatgcataaatc 10585903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 23397486 - 23397443
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||| ||||||||||||||  |||||||||||    
T  23397486 ggttatggtgcataaggaaatccttatgcaccatgcataaatcc 23397443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 211
Target Start/End: Complemental strand, 30414055 - 30414024
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctaca 211  Q
    ||||||||||||||||||||||||||||||||    
T  30414055 gtgcataaatcccaacataattgcttcctaca 30414024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 32987503 - 32987464
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  32987503 gttatggtgcataaggaaatccttatgcaccgtgcataaa 32987464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 39021982 - 39022021
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  39021982 gttatggtgcataaggaaatccttatgcaccgtgcataaa 39022021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 1672973 - 1672931
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||||| ||||||||||||||  |||||||||||    
T  1672973 gttatggtgcataaggaaatccttatgcaccctgcataaatcc 1672931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 327
Target Start/End: Original strand, 4835955 - 4835985
Alignment:
Q  297 ttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||||||||||||||||||    
T  4835955 ttcaatctcatcatcaacaccgtcgttcatc 4835985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 327
Target Start/End: Original strand, 4841400 - 4841430
Alignment:
Q  297 ttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||||||||||||||||||    
T  4841400 ttcaatctcatcatcaacaccgtcgttcatc 4841430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 27506708 - 27506750
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||||| ||||||||||||||  |||||||||||    
T  27506708 gttatggtgcataaggaaatccttatgcaccctgcataaatcc 27506750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 34647172 - 34647214
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||||||||||||| |||||||||||||| ||| |||||||    
T  34647172 ggttatggtgcataaggaaatccttatgcaccgtgtataaatc 34647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 42433708 - 42433746
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataa 101  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  42433708 gttatggtgcataaggaaatccttatgcaccgtgcataa 42433746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 35448528 - 35448483
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaacaaaac 235  Q
    |||||| ||||||||||||||||||||||  |||||||||| ||||    
T  35448528 cccaacttaattgcttcctacactcccaagcgaaaccaaacgaaac 35448483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 1149948 - 1149980
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    |||||||||| ||||||||||||||||||||||    
T  1149948 gtgcataaattccaacataattgcttcctacac 1149980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 1209556 - 1209524
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttc 324  Q
    |||| ||||||||||||||||||||||||||||    
T  1209556 gaatcttcaatctcatcatcaacaccgtcgttc 1209524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 7857821 - 7857789
Alignment:
Q  94 gtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||| ||||||||||||||||||||    
T  7857821 gtgcataaatcccaacataattgcttcctacac 7857789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 10237491 - 10237455
Alignment:
Q  184 ataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||||||||||||| |||||| |||||||    
T  10237491 ataaatcccaacataattgctttctacacccccaaag 10237455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 211
Target Start/End: Complemental strand, 15227168 - 15227140
Alignment:
Q  183 cataaatcccaacataattgcttcctaca 211  Q
    |||||||||||||||||||||||||||||    
T  15227168 cataaatcccaacataattgcttcctaca 15227140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 15809885 - 15809853
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcac 92  Q
    |||||||||||||||||| ||||||||||||||    
T  15809885 gcggttatggtgcataaggaaatccttatgcac 15809853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 18757373 - 18757329
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||||||||||||||  ||||||||||||||  ||||||||||    
T  18757373 gcggttatggtgcataaagaaatccttatgcaccctgcataaatc 18757329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 23567687 - 23567643
Alignment:
Q  61 cggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||||||| |||| |||||||||  |||||||||||    
T  23567687 cggttatggtgcataaggaaattcttatgcaccctgcataaatcc 23567643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 34633246 - 34633278
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    ||||||||||||||||||||||||||| |||||    
T  34633246 gtgcataaatcccaacataattgcttcttacac 34633278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 39023048 - 39023000
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||||||||||||||||||| |||| ||||| ||| ||| |||||||    
T  39023048 gggagcggttatggtgcataaggaaattcttatacaccgtgtataaatc 39023000  T

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Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 180 - 327
Target Start/End: Original strand, 19384414 - 19384571
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaa----------cgaaccaaacgcggaaacaaactgaatcatcaccg 269  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  19384414 gtgcataaatcccaacataattgcttcctacacccccaaaggaaaccaaacaaaacaaaaaaaaacgaaccaaacgcggaaacaaactgaatcatcaccg 19384513  T
Q  270 tcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19384514 tcgttcatcatcatcaccactggaatcttcaatctcatcatcaacaccgtcgttcatc 19384571  T

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Target: chr3; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 184 - 327
Target Start/End: Original strand, 51361560 - 51361703
Alignment:
Q  184 ataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcat 283  Q
    |||||||| |||||||||||||||||||| || ||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||     
T  51361560 ataaatcctaacataattgcttcctacacccctaaaggaaacaaaacaaaacaaaccaaatgcggaaacaaactgaatcatcaccgtcgttcatcatcaa 51361659  T
Q  284 caccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  51361660 caccactggaatcttcaatctcatcatcaacaccgtcgttcatc 51361703  T

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Target: chr3; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 180 - 309
Target Start/End: Complemental strand, 31853197 - 31853063
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaa-----cgaaccaaacgcggaaacaaactgaatcatcaccgtcgtt 274  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||||||||     ||||||||||||||||||||||| ||| ||||||||||||    
T  31853197 gtgcataaatcccaacataattgcttcctacaccttcaaaggaaaccaaacaaaataaaacgaaccaaacgcggaaacaaactaaattatcaccgtcgtt 31853098  T
Q  275 catcatcatcaccactggaattttcaatctcatca 309  Q
    ||||||||||||||||||||| |||||||||||||    
T  31853097 catcatcatcaccactggaatcttcaatctcatca 31853063  T

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Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 50755203 - 50755046
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaac----------gaaccaaacgcggaaacaaactgaatcatcaccg 269  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||          ||| |||||| |||||||||||| ||||||||||    
T  50755203 gtgcataaatcccaacataattgcttcctacacccccaaaggaaaccaaacaaaacaaaacaaaacgaatcaaacgtggaaacaaactggatcatcaccg 50755104  T
Q  270 tcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||||| ||||||||| |||| ||||||||||| ||||||| |||||||||||    
T  50755103 tcgttcatcattatcaccacttgaatcttcaatctcattatcaacagcgtcgttcatc 50755046  T

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Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 180 - 327
Target Start/End: Original strand, 7044390 - 7044546
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaacgaaccaaac---------gcggaaacaaactgaatcatcaccgt 270  Q
    |||||||||| | |||||||||||||| ||||| ||||||||||| ||||||| || || ||||          ||||||||||||||||||||||||||    
T  7044390 gtgcataaattctaacataattgcttcttacacccccaaaggaaatcaaacaatacaaaacaaaatgaacaaaggcggaaacaaactgaatcatcaccgt 7044489  T
Q  271 cgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  7044490 cgtttatcatcatcatcactggaatcttcaatctcatcatcaacaccgtcgttcatc 7044546  T

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Target: chr3; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 252 - 326
Target Start/End: Original strand, 52986596 - 52986670
Alignment:
Q  252 caaactgaatcatcaccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcat 326  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52986596 caaactgaatcatcaccgtcgttcatcatcatcaccactggaatcttcaatctcatcatcaacaccgtcgttcat 52986670  T

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Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 51361517 - 51361588
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  51361517 tgggagcggttatggtgcataaggaaatccttatgcaccgtgtataaatcctaacataattgcttcctacac 51361588  T

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Target: chr3; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 26662425 - 26662495
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26662425 gggagtggttatggtgcataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacac 26662495  T

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Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 3475293 - 3475363
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctaca 125  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  3475293 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 3475363  T

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Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 6097571 - 6097641
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  6097571 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 6097641  T

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Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 9595867 - 9595937
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  9595867 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 9595937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 19384376 - 19384446
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  19384376 gggagcggttatggtgcataaggaaattcttatgcaccgtgcataaatcccaacataattgcttcctacac 19384446  T

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Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 30947798 - 30947868
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  30947798 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 30947868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 54379341 - 54379271
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  54379341 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 54379271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 19284850 - 19284781
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctaca 125  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  19284850 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 19284781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 50755234 - 50755171
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  50755234 gttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 50755171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 9106446 - 9106376
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| || |||||||||||||||||    
T  9106446 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacac 9106376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 10986531 - 10986462
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctaca 125  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||  |||||||||||||||||||    
T  10986531 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctaca 10986462  T

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Target: chr3; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 2941821 - 2941883
Alignment:
Q  64 ttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  2941821 ttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgctttctacac 2941883  T

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Target: chr3; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 26960805 - 26960735
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| ||||| |||||||| |||||||||||| || |||||||||||||||||    
T  26960805 gggagtggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaatataattgcttcctacac 26960735  T

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Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 46237645 - 46237709
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttc 120  Q
    ||||| |||||||||||||||| |||||||||| ||| |||||||||||| ||||||||||||||    
T  46237645 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttc 46237709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 33413899 - 33413970
Alignment:
Q  56 gggagcggttatggtgcataagaaaatcc-ttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||| |||||||| |||||||||||| || |||||||||||||||||    
T  33413899 gggagtggttatggtgcataaggaaatcccttatgcaccgtgcataaatcccaatataattgcttcctacac 33413970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 8719186 - 8719137
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  8719186 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 8719137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 9071073 - 9071024
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  9071073 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 9071024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 16276663 - 16276713
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  16276663 tgggagcggttatggtgcataaagaaatccttatgcaccgtgcataaatcc 16276713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 26662462 - 26662503
Alignment:
Q  179 tgtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  26662462 tgtgcataaatcccaacataattgcttcctacacccccaaag 26662503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 9595905 - 9595945
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  9595905 gtgcataaatcccaacataattgcttcctacacccccaaag 9595945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 34562394 - 34562442
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||    
T  34562394 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 34562442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 47335216 - 47335141
Alignment:
Q  56 gggagcggttatggtgcataagaaaatcctt-----atgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| ||||||||     |||||| |||||||||||| |||||||||| |||||||||    
T  47335216 gggagtggttatggtgcataaggaaatcctttccttatgcaccgtgcataaatcccaacataattgtttcctacac 47335141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 50416615 - 50416564
Alignment:
Q  54 ttgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||| |||||||||||||||||| ||||||||||||||  |||||||||||    
T  50416615 ttgggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 50416564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 31853207 - 31853165
Alignment:
Q  84 cttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  31853207 cttatgcaccgtgcataaatcccaacataattgcttcctacac 31853165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 36185955 - 36185905
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||| |||||||||||||||||| ||||||||||||||  |||||||||||    
T  36185955 tgggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 36185905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 8036799 - 8036844
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  8036799 gcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 8036844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 47729163 - 47729118
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaacaaaac 235  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  47729163 cccaacataattgcttcctacacccccaaacgaaaccaaacgaaac 47729118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 50416479 - 50416524
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  50416479 gcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 50416524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 2941851 - 2941891
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  2941851 gtgcataaatcccaacataattgctttctacacccccaaag 2941891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 6097609 - 6097641
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    |||||||||||||||||||||||||||||||||    
T  6097609 gtgcataaatcccaacataattgcttcctacac 6097641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 9106408 - 9106368
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  9106408 gtgcataaatcccaatataattgcttcctacacccccaaag 9106368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 19284812 - 19284772
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  19284812 gtgcataaatcccaacataattgcttcctacatccccaaag 19284772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 26960767 - 26960727
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  26960767 gtgcataaatcccaatataattgcttcctacacccccaaag 26960727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 30947836 - 30947868
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    |||||||||||||||||||||||||||||||||    
T  30947836 gtgcataaatcccaacataattgcttcctacac 30947868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 47335173 - 47335133
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  47335173 gtgcataaatcccaacataattgtttcctacacccccaaag 47335133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 54379303 - 54379271
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    |||||||||||||||||||||||||||||||||    
T  54379303 gtgcataaatcccaacataattgcttcctacac 54379271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 211
Target Start/End: Original strand, 3475332 - 3475363
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctaca 211  Q
    ||||||||||||||||||||||||||||||||    
T  3475332 gtgcataaatcccaacataattgcttcctaca 3475363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 7044652 - 7044687
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  7044652 gaatcttcaatctcatcatcaacaccgtcgttcatc 7044687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 19384666 - 19384701
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  19384666 gaatcttcaatctcatcatcaacaccgtcgttcatc 19384701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 19385373 - 19385334
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  19385373 gttatggtgcataaggaaatccttatgcaccgtgcataaa 19385334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 47225759 - 47225806
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatccta 107  Q
    |||||||||||||||||  ||||||||||||||  |||||||||||||    
T  47225759 gcggttatggtgcataaacaaatccttatgcaccctgcataaatccta 47225806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 51362496 - 51362457
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  51362496 gttatggtgcataaggaaatccttatgcaccgtgcataaa 51362457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 12974006 - 12974056
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||| |||||||||||||||||| ||||||||||||||  ||| |||||||    
T  12974006 tgggcgcggttatggtgcataaggaaatccttatgcaccctgcctaaatcc 12974056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 8037034 - 8036989
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||||| || ||||||||||||||  |||||||||||    
T  8037034 gcggttatggtgcatgaggaaatccttatgcaccctgcataaatcc 8036989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 12974235 - 12974191
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  12974235 gcggttatggtgcataaggaaatccttatgcac-ctgcataaatcc 12974191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 19012607 - 19012562
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| |||| |||||||||  |||||||||||    
T  19012607 gcggttatggtgcataaggaaattcttatgcaccctgcataaatcc 19012562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 23700084 - 23700039
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaacaaaac 235  Q
    ||||||||||||||||||||||| |||||  |||||||||| ||||    
T  23700084 cccaacataattgcttcctacacccccaagcgaaaccaaacgaaac 23700039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 23718539 - 23718494
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaacaaaac 235  Q
    ||||||||||||||||||||||| |||||  |||||||||| ||||    
T  23718539 cccaacataattgcttcctacacccccaagcgaaaccaaacgaaac 23718494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 23736995 - 23736950
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaacaaaac 235  Q
    ||||||||||||||||||||||| |||||  |||||||||| ||||    
T  23736995 cccaacataattgcttcctacacccccaagcgaaaccaaacgaaac 23736950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 36185725 - 36185770
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| |||||||||||||   |||||||||||    
T  36185725 gcggttatggtgcataaggaaatccttatgcatcctgcataaatcc 36185770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 41191403 - 41191452
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||| |||||||||||||| | |||| ||||||||| |||||||||||    
T  41191403 tgggagtggttatggtgcatagggaaattcttatgcaccgtgcataaatc 41191452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 47924408 - 47924367
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    ||||||||||||||| ||||||||||||||  ||||||||||    
T  47924408 gttatggtgcataaggaaatccttatgcaccctgcataaatc 47924367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 8718108 - 8718148
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    ||||||||||||||| |||||||||||||| || |||||||    
T  8718108 gttatggtgcataaggaaatccttatgcaccgtacataaat 8718148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 9069995 - 9070035
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    ||||||||||||||| |||||||||||||| || |||||||    
T  9069995 gttatggtgcataaggaaatccttatgcaccgtacataaat 9070035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 11065433 - 11065461
Alignment:
Q  60 gcggttatggtgcataagaaaatccttat 88  Q
    |||||||||||||||||||||||||||||    
T  11065433 gcggttatggtgcataagaaaatccttat 11065461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 27068531 - 27068563
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcac 92  Q
    |||||||||||||||||| ||||||||||||||    
T  27068531 gcggttatggtgcataaggaaatccttatgcac 27068563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 27446255 - 27446215
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    ||||||||||||||| ||||||||||||||  |||||||||    
T  27446255 gttatggtgcataaggaaatccttatgcaccttgcataaat 27446215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 33413938 - 33413970
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    ||||||||||||||| |||||||||||||||||    
T  33413938 gtgcataaatcccaatataattgcttcctacac 33413970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 46237683 - 46237723
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||| ||| | |||||||    
T  46237683 gtgcataaatcccaacataattgcttcatactcccccaaag 46237723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 3e-57; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 180 - 327
Target Start/End: Original strand, 18297201 - 18297353
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaac-----aaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgtt 274  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||     ||||||||||||||||||||||||||||||||||||  ||||||    
T  18297201 gtgcataaatcccaacataattgcttcctacacccccaaaggaaaccaaacaaaacaaaacgaaccaaacgcggaaacaaactgaatcatcattgtcgtt 18297300  T
Q  275 catcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  18297301 catcatcatcaccactggaatattcaatctcatcaccaacaccgtcgttcatc 18297353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 183 - 327
Target Start/End: Complemental strand, 2264662 - 2264508
Alignment:
Q  183 cataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaac----------gaaccaaacgcggaaacaaactgaatcatcaccgtcg 272  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||          ||||||||||||||||||||||||||||||| ||| |    
T  2264662 cataaattccaacataattgcttcctacacccccaaaggaaaccaaacaaaacaaaacaaaacgaaccaaacgcggaaacaaactgaatcatcatcgttg 2264563  T
Q  273 ttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2264562 ttcatcatcatcaccactggaatcttcaatctcatcatcaacaccgtcgttcatc 2264508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 180 - 327
Target Start/End: Original strand, 4578592 - 4578749
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaac----------aaaacgaaccaaacgcggaaacaaactgaatcatcaccg 269  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||||          |||||||| ||||||| ||||||||||||||||||||||    
T  4578592 gtgcataaatcccaacataattgcttcctacaccttcaaaggaaaccaaacaaaacaaaacaaaacgaatcaaacgcagaaacaaactgaatcatcaccg 4578691  T
Q  270 tcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  4578692 tcgttcatcatcatcaccactagaatcttcaatctcatcatcaacaccgtcgttcatc 4578749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 25194002 - 25193845
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaac----------gaaccaaacgcggaaacaaactgaatcatcaccg 269  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||| |||||||||          ||||||||||| ||||||||||||||||||||||    
T  25194002 gtgcataaatcccaatataattgtttcctacacccccaaaggaaacaaaacaaaacaaaacaaaatgaaccaaacgcagaaacaaactgaatcatcaccg 25193903  T
Q  270 tcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  25193902 tcgttcatcatcatcaccactggaatcttcaatctcatcatcaacaccgtggttcatc 25193845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 222 - 327
Target Start/End: Original strand, 4280800 - 4280905
Alignment:
Q  222 aaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcg 321  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  4280800 aaacaaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccatcgttcatcatcatcaccaccggaatcttcaatctcatcatcaacaccgtcg 4280899  T
Q  322 ttcatc 327  Q
    ||||||    
T  4280900 ttcatc 4280905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 222 - 327
Target Start/End: Complemental strand, 25996015 - 25995910
Alignment:
Q  222 aaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcg 321  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  25996015 aaacaaaacaaaacgaaccaaatgcggaaacaaactgaatcatcaccgtcggtcatcatcatcaccaccggaatcttcaatctcatcatcaacaccgtcg 25995916  T
Q  322 ttcatc 327  Q
    ||||||    
T  25995915 ttcatc 25995910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 14550465 - 14550602
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaac----------aaaacgaaccaaacgcggaaacaaactgaatcatcaccg 269  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||||||          |||||||||||||||||||||||||||||||||||||||    
T  14550465 gtgcataaatcccaacaaaattgcttcctacac-cccaaagaaaaccaaacaaaacaaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccg 14550563  T
Q  270 tcgttcatcatcatcaccactggaattttcaatctcatc 308  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  14550564 tcgttcatcatcatcaccattggaatcttcaatctcatc 14550602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 327
Target Start/End: Complemental strand, 43823808 - 43823705
Alignment:
Q  224 accaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgtt 323  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||  ||||| |||||||||||||||||||||||||||    
T  43823808 accaaacaaaacgaaccaaacgcggaaacaaattgaatcatcattgtcgttcatcatcatcaccatcggaatcttcaatctcatcatcaacaccgtcgtt 43823709  T
Q  324 catc 327  Q
    ||||    
T  43823708 catc 43823705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 227 - 319
Target Start/End: Original strand, 36635867 - 36635959
Alignment:
Q  227 aaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgt 319  Q
    |||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||  |||| |||||||||||||||||||||||    
T  36635867 aaacaaaacgaatcaaatgcggaaacaaactgaatcatcaccgtcggtcatcatcatcaccaccagaatcttcaatctcatcatcaacaccgt 36635959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 4962615 - 4962689
Alignment:
Q  253 aaactgaatcatcaccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||  ||||||||||    
T  4962615 aaactgaatcatcaccgtcgttcatcatcatcaccaccggaatcttcaatctcatcatcaacattgtcgttcatc 4962689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 39355215 - 39355144
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  39355215 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 39355144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 7487141 - 7487211
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  7487141 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 7487211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 18297163 - 18297233
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||||||| | |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  18297163 gggagcggttatggtgcatagggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 18297233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 1292066 - 1292136
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||| | ||||||||||||||||||||    
T  1292066 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacataattgcttcctacac 1292136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 34464884 - 34464820
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||||||| |||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  34464884 ggttatggtccataaggaaatccttatgcaccgtgcataaatccaaacataattgcttcctacac 34464820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 8150010 - 8149940
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| ||| |||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  8150010 gggagtggtaatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacac 8149940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 8154634 - 8154564
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| ||| |||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  8154634 gggagtggtaatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacac 8154564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 15016453 - 15016523
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||| ||||||||| |||||||||||  ||||||||||||||||||||    
T  15016453 gggagtggttatggtgcataaggaaattcttatgcaccgtgcataaatctcaacataattgcttcctacac 15016523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 262 - 327
Target Start/End: Complemental strand, 28478116 - 28478051
Alignment:
Q  262 catcaccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||| |||||||||    
T  28478116 catcaccgtcgttcatcatcattaccaccggaatcttcaatcttatcatcaacaccctcgttcatc 28478051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 25194040 - 25193970
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||| ||||||||||||||||  |||||||||||||| |||||||||||| || ||||||| |||||||||    
T  25194040 gggatcggttatggtgcataatgaaatccttatgcaccgtgcataaatcccaatataattgtttcctacac 25193970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 39355176 - 39355136
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  39355176 gtgcataaatcccaacataattgcttcctacacccccaaag 39355136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 4578844 - 4578879
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||||||||||||||||||||||||||||||    
T  4578844 gaattttcaatctcatcatcaacaccgtcgttcatc 4578879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 8149971 - 8149932
Alignment:
Q  181 tgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  8149971 tgcataaatcccaacataattgcttcctacacccccaaag 8149932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 8154595 - 8154556
Alignment:
Q  181 tgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  8154595 tgcataaatcccaacataattgcttcctacacccccaaag 8154556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 41345082 - 41345129
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||||||    
T  41345082 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 41345129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 42364491 - 42364534
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||||||||||||||||||  |||||||||    
T  42364491 gcggttatggtgcataagaaaatccttatgcaccctgcataaat 42364534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 31783787 - 31783837
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||| |||||||||||||||||| ||||||||||||||  |||||||||||    
T  31783787 tgggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 31783837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 18762975 - 18762938
Alignment:
Q  183 cataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  18762975 cataaatcccaacataattgcttcctacacttccaaag 18762938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 30777294 - 30777339
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||||||| |||||||||||||||  |||||||||||    
T  30777294 gcggttatggtgcataaaaaaatccttatgcaccctgcataaatcc 30777339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 7487179 - 7487211
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    |||||||||||||||||||||||||||||||||    
T  7487179 gtgcataaatcccaacataattgcttcctacac 7487211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 9143726 - 9143686
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  9143726 gtgcataaattccaacataattgcttcctacacccccaaag 9143686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 15016491 - 15016531
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  15016491 gtgcataaatctcaacataattgcttcctacacccccaaag 15016531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 20661395 - 20661439
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||    
T  20661395 gcggttatggtgcataaggaaatccttatgcaccctgcataaatc 20661439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 1292104 - 1292143
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaa 219  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  1292104 gtgcataaattccaacataattgcttcctacacccccaaa 1292143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 4578974 - 4579009
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  4578974 gaatcttcaatctcatcatcaacaccgtcgttcatc 4579009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 12449053 - 12449096
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||| ||||||||||||||  |||||||||    
T  12449053 gcggttatggtgcataaggaaatccttatgcacactgcataaat 12449096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 14550708 - 14550743
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||||||||||||||||||||||| ||||||    
T  14550708 gaattttcaatctcatcatcaacaccgtcattcatc 14550743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 91
Target Start/End: Complemental strand, 15150336 - 15150305
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgca 91  Q
    ||||||||||||||||||||||||||||||||    
T  15150336 gcggttatggtgcataagaaaatccttatgca 15150305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 18297461 - 18297496
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  18297461 gaatcttcaatctcatcatcaacaccgtcgttcatc 18297496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 18298169 - 18298130
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  18298169 gttatggtgcataaggaaatccttatgcaccgtgcataaa 18298130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 18762988 - 18762945
Alignment:
Q  84 cttatgcactgtgcataaatcctaacataattgcttcctacact 127  Q
    ||||||||| || ||||||||| |||||||||||||||||||||    
T  18762988 cttatgcaccgtacataaatcccaacataattgcttcctacact 18762945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 24183642 - 24183599
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||| ||||||||||||||  |||||||||    
T  24183642 gcggttatggtgcataaggaaatccttatgcaccctgcataaat 24183599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 25192899 - 25192938
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  25192899 gttatggtgcataaggaaatccttatgcaccgtgcataaa 25192938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Complemental strand, 25193618 - 25193583
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  25193618 gaatcttcaatctcatcatcaacaccgtcgttcatc 25193583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Complemental strand, 25193749 - 25193714
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  25193749 gaatcttcaatctcatcatcaacaccgtcgttcatc 25193714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 34726605 - 34726648
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||| ||||||||||||||  |||||||||||    
T  34726605 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 34726648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 22596554 - 22596504
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||| |||||||||||||||||| ||||||||||| ||  |||||||||||    
T  22596554 tgggtgcggttatggtgcataaggaaatccttatgtaccctgcataaatcc 22596504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 31711504 - 31711554
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||| |||||||||||||||||| ||||||||||| ||  |||||||||||    
T  31711504 tgggtgcggttatggtgcataaggaaatccttatgtaccctgcataaatcc 31711554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 34726846 - 34726796
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||| |||||||||||||||||| |||| |||||||||  |||||||||||    
T  34726846 tgggtgcggttatggtgcataaggaaattcttatgcaccctgcataaatcc 34726796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 16111750 - 16111705
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||| ||||||||  |||||||||||    
T  16111750 gcggttatggtgcataaggaaatctttatgcaccctgcataaatcc 16111705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 22596303 - 22596348
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||| ||||| ||||||||||||||  |||||||||||    
T  22596303 gcggttatggtgtataaggaaatccttatgcaccctgcataaatcc 22596348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 25996070 - 25996029
Alignment:
Q  190 cccaacataattgcttcctacac-tcccaaaggaaaccaaac 230  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  25996070 cccaacataattgtttcctacacctcccaaaggaaaccaaac 25996029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 42364738 - 42364693
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||| ||| ||||||||||||||  |||||||||||    
T  42364738 gcggttatggtgcaaaaggaaatccttatgcaccctgcataaatcc 42364693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 43823920 - 43823875
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||  |||||||| |||||||||||||| ||||||||||||    
T  43823920 gcggttatcatgcataaggaaatccttatgcaccgtgcataaatcc 43823875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 44915536 - 44915491
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| |||| |||||||||  |||||||||||    
T  44915536 gcggttatggtgcataaggaaatgcttatgcaccctgcataaatcc 44915491  T

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Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 4578592 - 4578624
Alignment:
Q  94 gtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||| ||||||||||||||||||||    
T  4578592 gtgcataaatcccaacataattgcttcctacac 4578624  T

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Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 19246664 - 19246704
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    ||||||||||||||| ||||||||||||||  |||||||||    
T  19246664 gttatggtgcataaggaaatccttatgcaccctgcataaat 19246704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 20661639 - 20661595
Alignment:
Q  61 cggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  20661639 cggttatggtgcataaggaaatcattatgcaccctgcataaatcc 20661595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 31784030 - 31783998
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcac 92  Q
    |||||||||||||||||| ||||||||||||||    
T  31784030 gcggttatggtgcataaggaaatccttatgcac 31783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 34464852 - 34464820
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    |||||||||||| ||||||||||||||||||||    
T  34464852 gtgcataaatccaaacataattgcttcctacac 34464820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 37867148 - 37867196
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||| |||||||||||||||||| |||||||||| |||  |||||||||    
T  37867148 tgggtgcggttatggtgcataaggaaatccttatccaccctgcataaat 37867196  T

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Target: chr4 (Bit Score: 109; Significance: 8e-55; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 180 - 323
Target Start/End: Complemental strand, 45256906 - 45256758
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaac-----gaaccaaacgcggaaacaaactgaatcatcaccgtcgtt 274  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||     ||||||||||||||||||||||||||||||||||| |||    
T  45256906 gtgcataaatcccaacataattgcttcctacacccccaaaggaaactaaacaaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgttgtt 45256807  T
Q  275 catcatcatcaccactggaattttcaatctcatcatcaacaccgtcgtt 323  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||    
T  45256806 catcatcaccaccactggaatcttcaatctcatcatcaacaccgtcgtt 45256758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 180 - 319
Target Start/End: Original strand, 26577294 - 26577438
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaac-----aaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgtt 274  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||| ||||     ||||||||||||||| ||||||||||||||||||||||||||||    
T  26577294 gtgcataaatttcaacataattgcttcctacacccccaaaggaaacaaaacaaaacaaaacgaaccaaacgtggaaacaaactgaatcatcaccgtcgtt 26577393  T
Q  275 catcatcatcaccactggaattttcaatctcatcatcaacaccgt 319  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  26577394 catcatcatcaccactggaatcttcaatctcatcatcaacaccgt 26577438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 10473659 - 10473502
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaac----------aaaacgaaccaaacgcggaaacaaactgaatcatcaccg 269  Q
    |||||||||| ||||| |||||||||||||||| |||||||||||||||||          |||| |||||||||||||||||||| |||||||||||||    
T  10473659 gtgcataaattccaacctaattgcttcctacacccccaaaggaaaccaaaccaaataaaacaaaatgaaccaaacgcggaaacaaattgaatcatcaccg 10473560  T
Q  270 tcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10473559 tcgttcatcatcatcaccactggaatcttcaatctcatcatcaacaccgtcgttcatc 10473502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 180 - 327
Target Start/End: Original strand, 51836360 - 51836510
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaagg------aaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgt 273  Q
    ||||||||||||||||||||||||||||||||| || |||||      |||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  51836360 gtgcataaatcccaacataattgcttcctacacccctaaaggaaaaccaaacaaaacaaaacgaaccaaacgcggaaacaaactgaatcattaccgtcgt 51836459  T
Q  274 tcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
       ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  51836460 ---tcatcatcaccactggaatcttcaatctcatcatcaacaccgtcgttcatc 51836510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 639005 - 638848
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaac----------gaaccaaacgcggaaacaaactgaatcatcaccg 269  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||          |||||||||||  ||||||| ||||||||||| |    
T  639005 gtgcataaatcccaacataattgcttcctacacccccaaaggaaaccaaacaaaacaaaacaaaacgaaccaaacgcaaaaacaaattgaatcatcactg 638906  T
Q  270 tcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  638905 tcgttcatcatcatcaccattggaatcttcaatctcatcatcaacaccgtcgttcatc 638848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 180 - 320
Target Start/End: Complemental strand, 38245929 - 38245784
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaacgaaccaaac-----gcggaaacaaactgaatcatcaccgtcgtt 274  Q
    ||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| || |||||     | | ||||||||||||| ||||||||||||    
T  38245929 gtgcataaatcccaacataattgtttcctacacccccaaagaaaaccaaacaaaacaaaacaaacaaaacgtgaaaacaaactgaattatcaccgtcgtt 38245830  T
Q  275 catcatcatcaccactggaattttcaatctcatcatcaacaccgtc 320  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  38245829 catcatcatcaccactggaatcttcaatctcatcatcaacaccgtc 38245784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 222 - 327
Target Start/End: Original strand, 48077029 - 48077134
Alignment:
Q  222 aaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcg 321  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||||||||| ||||    
T  48077029 aaacaaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatcatcatcggaatcttcaatctcatcatcaacactgtcg 48077128  T
Q  322 ttcatc 327  Q
    ||||||    
T  48077129 ttcatc 48077134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 239 - 327
Target Start/End: Complemental strand, 50644646 - 50644558
Alignment:
Q  239 ccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  50644646 ccaaacgcgaaaacaaattgaatcatcacagtcgttcatcatcatcaccactggaatcttcaatctcatcatcaataccgtcgttcatc 50644558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 15051021 - 15051093
Alignment:
Q  54 ttgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  15051021 ttgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacac 15051093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 45256944 - 45256874
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  45256944 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 45256874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 11786153 - 11786083
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  11786153 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 11786083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 11798320 - 11798250
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  11798320 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 11798250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 49425944 - 49426014
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  49425944 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 49426014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 262 - 327
Target Start/End: Original strand, 9551742 - 9551807
Alignment:
Q  262 catcaccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||    
T  9551742 catcaccgtcgttcatcatcatcaccaccagaatcttcaatctcatcatcaacaccgtcgttcatc 9551807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 10473699 - 10473627
Alignment:
Q  54 ttgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| | ||| ||||||||||||||||    
T  10473699 ttgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacctaattgcttcctacac 10473627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 13635618 - 13635682
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  13635618 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 13635682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 30597872 - 30597808
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  30597872 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 30597808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 49492406 - 49492470
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacact 127  Q
    ||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||    
T  49492406 gttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacact 49492470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 639035 - 638973
Alignment:
Q  64 ttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  639035 ttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 638973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 26577257 - 26577326
Alignment:
Q  57 ggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||   ||||||||||||||||||||    
T  26577257 ggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatttcaacataattgcttcctacac 26577326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 50644713 - 50644652
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttccta 123  Q
    |||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  50644713 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 50644652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 53441500 - 53441429
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||| |||||||||||||||| |||||||||||||| | |||||||| | ||||||||||||||||||||    
T  53441500 tgggagtggttatggtgcataaggaaatccttatgcaccgggcataaattccaacataattgcttcctacac 53441429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 27865624 - 27865694
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||| ||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  27865624 gggagtggttatggtgtataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacac 27865694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 51836324 - 51836392
Alignment:
Q  58 gagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||||||| ||||  |||||||  |||||||||||| ||||||||||||||||||||    
T  51836324 gagcggttatggtgcataaggaaatttttatgcatcgtgcataaatcccaacataattgcttcctacac 51836392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 51921166 - 51921222
Alignment:
Q  70 tgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  51921166 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 51921222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 22180199 - 22180250
Alignment:
Q  54 ttgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  22180199 ttgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 22180250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 6385464 - 6385510
Alignment:
Q  222 aaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcacc 268  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  6385464 aaacaaaacaaaacgaaccaaacgcggaaacaaactgaatcatcacc 6385510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 35291451 - 35291505
Alignment:
Q  72 cataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  35291451 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 35291505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 46672617 - 46672547
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| ||||||| |||||||| |||| ||||||||  |||||||||||| ||||| ||||||||||||||    
T  46672617 gggagtggttatgttgcataaggaaattcttatgcatcgtgcataaatcccaacatgattgcttcctacac 46672547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 53526253 - 53526295
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  53526253 gttatggtgcataagaaaatccttatgcactttgcataaatcc 53526295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 25715772 - 25715727
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  25715772 gcggttatggtgcataagaaaatccttatgcaccctgcataaatcc 25715727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 30358886 - 30358837
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||||||||    
T  30358886 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 30358837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 54895403 - 54895448
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  54895403 gcggttatggtgcataagaaaatccttatgcaccctgcataaatcc 54895448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 13635650 - 13635690
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  13635650 gtgcataaatcccaacataattgcttcctacacccccaaag 13635690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 36309662 - 36309618
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||||||||||||||||||||||||||||||  ||||||||||    
T  36309662 gcggttatggtgcataagaaaatccttatgcaccctgcataaatc 36309618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 49425982 - 49426022
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  49425982 gtgcataaatcccaacataattgcttcctacacccccaaag 49426022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 49492437 - 49492477
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  49492437 gtgcataaatcccaacataattgcttcctacactcctaaag 49492477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 51921190 - 51921230
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  51921190 gtgcataaatcccaacataattgcttcctacacccccaaag 51921230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 27865663 - 27865702
Alignment:
Q  181 tgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  27865663 tgcataaatcccaacataattgcttcctacacccccaaag 27865702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 35291473 - 35291512
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaa 219  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  35291473 gtgcataaatcccaacataattgcttcctacacccccaaa 35291512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 53865294 - 53865243
Alignment:
Q  54 ttgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||| |||||||||||||||||| ||||||||||||||  |||||||||||    
T  53865294 ttgggcgcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 53865243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 21995664 - 21995714
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||| |||||||||||||||||| ||||||||||||||  |||||||||||    
T  21995664 tgggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 21995714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 47567886 - 47567940
Alignment:
Q  51 tacttgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||| ||| |||||||||||| ||||||||||||||||||||  |||||||||||    
T  47567886 tactcgggtgcggttatggtgaataagaaaatccttatgcaccttgcataaatcc 47567940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 1728620 - 1728669
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||| ||||||||||||||||||||| |||||| || ||||||||||||    
T  1728620 gggagtggttatggtgcataagaaaattcttatgtaccgtgcataaatcc 1728669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 8165761 - 8165806
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  8165761 gcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 8165806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 17109963 - 17109918
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  17109963 gcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 17109918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 30597840 - 30597803
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactccca 217  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  30597840 gtgcataaatcccaacataattgcttcctacaccccca 30597803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 30779342 - 30779387
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  30779342 gcggttatggtgcataaggaaatccttatgcaccttgcataaatcc 30779387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 36924240 - 36924285
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  36924240 gcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 36924285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 37059710 - 37059755
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  37059710 gcggttatggtgcataaggaaatccttatgcaccttgcataaatcc 37059755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 1492671 - 1492715
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||    
T  1492671 gcggttatggtgcataaggaaatccttatgcaccctgcataaatc 1492715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 1622017 - 1621985
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    |||||||||||||||||||||||||||||||||    
T  1622017 gtgcataaatcccaacataattgcttcctacac 1621985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 4169473 - 4169429
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||||||||||||||| |||| |||||||||||| ||||||||    
T  4169473 gcggttatggtgcataaggaaattcttatgcactgtacataaatc 4169429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 6385502 - 6385550
Alignment:
Q  279 atcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||||| ||||| |||||||||||||||||||  ||||||||||    
T  6385502 atcatcaccaccggaatcttcaatctcatcatcaacattgtcgttcatc 6385550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 11786115 - 11786083
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    |||||||||||||||||||||||||||||||||    
T  11786115 gtgcataaatcccaacataattgcttcctacac 11786083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 11798282 - 11798250
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    |||||||||||||||||||||||||||||||||    
T  11798282 gtgcataaatcccaacataattgcttcctacac 11798250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 15051061 - 15051101
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  15051061 gtgcataaatcctaacataattgcttcctacacccccaaag 15051101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 21098181 - 21098133
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||||||||||||| ||||| ||||||||||||||  ||||||||||    
T  21098181 gggagcggttatggtgtataaggaaatccttatgcaccatgcataaatc 21098133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 33819690 - 33819734
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||    
T  33819690 gcggttatggtgcataaggaaatccttatgcaccctgcataaatc 33819734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 2124343 - 2124386
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||| ||||||||||||||  |||||||||    
T  2124343 gcggttatggtgcataaggaaatccttatgcaccctgcataaat 2124386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 6841820 - 6841863
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||| ||||||||||||||  |||||||||    
T  6841820 gcggttatggtgcataaggaaatccttatgcaccctgcataaat 6841863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 22181303 - 22181264
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  22181303 gttatggtgcataaggaaatccttatgcaccgtgcataaa 22181264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 25715644 - 25715687
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||| ||||||||||||||  |||||||||||    
T  25715644 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 25715687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 27764247 - 27764286
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  27764247 gttatggtgcataaggaaatccttatgcaccgtgcataaa 27764286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 31763153 - 31763110
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||| ||||||||||||||  |||||||||    
T  31763153 gcggttatggtgcataaggaaatccttatgcaccctgcataaat 31763110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 36621759 - 36621720
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  36621759 gttatggtgcataaggaaatccttatgcaccgtgcataaa 36621720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 45255982 - 45256021
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  45255982 gttatggtgcataaggaaatccttatgcaccgtgcataaa 45256021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Complemental strand, 45256646 - 45256611
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  45256646 gaatcttcaatctcatcatcaacaccgtcgttcatc 45256611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 50643750 - 50643789
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  50643750 gttatggtgcataaggaaatccttatgcaccgtgcataaa 50643789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 50644681 - 50644642
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaa 219  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  50644681 gtgcataaatcccaacataattgcttcctatacccccaaa 50644642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 54895626 - 54895583
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||| ||||||||||||||  |||||||||||    
T  54895626 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 54895583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 8157340 - 8157290
Alignment:
Q  54 ttgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    ||||| || ||||||||||||||| ||||||||||||||  ||||||||||    
T  8157340 ttgggtgcagttatggtgcataaggaaatccttatgcaccctgcataaatc 8157290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 53441459 - 53441421
Alignment:
Q  182 gcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  53441459 gcataaattccaacataattgcttcctacacccccaaag 53441421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 2124590 - 2124545
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| |||| |||||||||  |||||||||||    
T  2124590 gcggttatggtgcataaggaaattcttatgcaccctgcataaatcc 2124545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 12722983 - 12722938
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| |||| |||||||||  |||||||||||    
T  12722983 gcggttatggtgcataaggaaattcttatgcaccctgcataaatcc 12722938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 17109718 - 17109763
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||| ||  |||||||||||    
T  17109718 gcggttatggtgcataaggaaatccttatgtaccttgcataaatcc 17109763  T

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Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 21098113 - 21098068
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaacaaaac 235  Q
    ||||||||||||||||| ||||| |||||  |||||||||||||||    
T  21098113 cccaacataattgcttcatacacccccaagcgaaaccaaacaaaac 21098068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 25573279 - 25573324
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaacaaaac 235  Q
    ||||||||||||||||| ||||| |||||  |||||||||||||||    
T  25573279 cccaacataattgcttcgtacacccccaagcgaaaccaaacaaaac 25573324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 27765269 - 27765225
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaacaaaac 235  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||    
T  27765269 cccaacataattgcttcctacac-cccaagcgaaaccaaacaaaac 27765225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 36309419 - 36309460
Alignment:
Q  64 ttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||| ||||||||||||||  |||||||||||    
T  36309419 ttatggtgcataaggaaatccttatgcaccctgcataaatcc 36309460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 43374446 - 43374491
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||| ||  |||||||||||    
T  43374446 gcggttatggtgcataaggaaatccttatgtaccctgcataaatcc 43374491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 48076911 - 48076956
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||  |||||||| |||||||||||||| ||||||||||||    
T  48076911 gcggttatcatgcataaggaaatccttatgcaccgtgcataaatcc 48076956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 1622017 - 1621985
Alignment:
Q  94 gtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||| ||||||||||||||||||||    
T  1622017 gtgcataaatcccaacataattgcttcctacac 1621985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 9551625 - 9551678
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaacc-aaacaaaacgaaccaaac 244  Q
    ||||||||||||||||||||||| ||||||  ||||| |||||||| |||||||||    
T  9551625 cccaacataattgcttcctacacccccaaa--aaaccaaaacaaaatgaaccaaac 9551678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 9967922 - 9967882
Alignment:
Q  53 cttgggagcggttatggtgcataagaaaatccttatgcact 93  Q
    |||||| |||||||||||||||||||||||  |||||||||    
T  9967922 cttgggtgcggttatggtgcataagaaaatttttatgcact 9967882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 12722736 - 12722768
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcac 92  Q
    |||||||||||||||||| ||||||||||||||    
T  12722736 gcggttatggtgcataaggaaatccttatgcac 12722768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 24687324 - 24687284
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaac 230  Q
    |||| |||||||||||||||||| || ||||||||||||||    
T  24687324 cccatcataattgcttcctacacccctaaaggaaaccaaac 24687284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 26447467 - 26447431
Alignment:
Q  66 atggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    |||||||||||| |||||||||||||| |||||||||    
T  26447467 atggtgcataaggaaatccttatgcaccgtgcataaa 26447431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 33883293 - 33883325
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcac 92  Q
    |||||||||||||||||| ||||||||||||||    
T  33883293 gcggttatggtgcataaggaaatccttatgcac 33883325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 46672579 - 46672547
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    |||||||||||||||||| ||||||||||||||    
T  46672579 gtgcataaatcccaacatgattgcttcctacac 46672547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 108; Significance: 3e-54; HSPs: 3)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 180 - 327
Target Start/End: Original strand, 24362 - 24507
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatca 279  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||    
T  24362 gtgcataaatcc-aacataattgcttcctacac-cccaaaggaaaccaaacaaaacaaaccaaacgcggaaacaaactgaatcatcatcttcgttcatca 24459  T
Q  280 tcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  24460 tcatcaccactagaatcttcaatctcatcatcaacgccgtcgttcatc 24507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 24612 - 24647
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  24612 gaatcttcaatctcatcatcaacaccgtcgttcatc 24647  T

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Target: scaffold0238; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 25290 - 25251
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  25290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 25251  T

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Target: chr7 (Bit Score: 107; Significance: 1e-53; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 48692061 - 48691904
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaac----------gaaccaaacgcggaaacaaactgaatcatcaccg 269  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||          |||||||||||||||||||||||||||||||||     
T  48692061 gtgcataaatcccaacataattgcttcctacacctccaaaggaaaccaaacaaaacaaaacaaaacgaaccaaacgcggaaacaaactgaatcatcacct 48691962  T
Q  270 tcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  48691961 tcgttcatcatcatcaccactggaatcttcaatctcatcatcaacaccgtcgttcatc 48691904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 181 - 327
Target Start/End: Original strand, 46572608 - 46572764
Alignment:
Q  181 tgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaa----------caaaacgaaccaaacgcggaaacaaactgaatcatcaccgt 270  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||          ||||||||||||||| |||||||||||||||||||||||||    
T  46572608 tgcataaatcccaacataattgcttcctacacccccaaaggaaaccaaataaaacaaaacaaaacgaaccaaacacggaaacaaactgaatcatcaccgt 46572707  T
Q  271 cgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  46572708 ccttcatcatcatcaccactggaatcttcaatctcatcatcaacactgtcgttcatc 46572764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 181 - 327
Target Start/End: Original strand, 15973894 - 15974050
Alignment:
Q  181 tgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaacgaa----------ccaaacgcggaaacaaactgaatcatcaccgt 270  Q
    |||||||||||||||||| ||||||||||||| || ||||||||||||||||||| ||          ||||||||||||||||||||||||||||||||    
T  15973894 tgcataaatcccaacatagttgcttcctacacccctaaaggaaaccaaacaaaacaaaacaaaacaaaccaaacgcggaaacaaactgaatcatcaccgt 15973993  T
Q  271 cgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||||| || ||| ||||||||||||||||||| |||||||||||    
T  15973994 cgttcatcatcatcaccattgaaatcttcaatctcatcatcaacatcgtcgttcatc 15974050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 222 - 327
Target Start/End: Original strand, 44140171 - 44140276
Alignment:
Q  222 aaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcg 321  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||    
T  44140171 aaacaaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatcaccaccggaatcttcaatctcatcatcaacacagtcg 44140270  T
Q  322 ttcatc 327  Q
    ||||||    
T  44140271 ttcatc 44140276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 48306363 - 48306207
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaac----------gaaccaaacgcggaaacaaactgaatcatcaccg 269  Q
    |||||||||||||||||||||| ||||||||||   ||||| ||||||||||||||          ||||||||||||||||||| ||||||||||||||    
T  48306363 gtgcataaatcccaacataatt-cttcctacaccttcaaagaaaaccaaacaaaacaaaacaaaatgaaccaaacgcggaaacaagctgaatcatcaccg 48306265  T
Q  270 tcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  48306264 tcgttcatcatcatcaccactggaatcttcagtctcatcatcaacaccgtcgttcatc 48306207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 763876 - 763806
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  763876 gggagtggttatggtgcataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacac 763806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 30884109 - 30884179
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  30884109 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacac 30884179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 180 - 270
Target Start/End: Original strand, 34228638 - 34228725
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgt 270  Q
    |||||||||||||||||  |   ||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34228638 gtgcataaatcccaacacta---cttcctacacctccaaaggaaaccaaacaaaatgaaccaaacgcggaaacaaactgaatcatcaccgt 34228725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 46358701 - 46358629
Alignment:
Q  54 ttgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  46358701 ttgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 46358629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 41910998 - 41911069
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  41910998 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 41911069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 48692100 - 48692029
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| ||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  48692100 tgggatcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 48692029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 279
Target Start/End: Original strand, 32685877 - 32685986
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaa----------caaaacgaaccaaacgcggaaacaaactgaatcatcaccg 269  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||| ||||          |||||||||||||||||||||||||||||||||||||||     
T  32685877 gtgcataaatctcaacataattgcttcctacaccctcaaaggaaatcaaataaaataaaacaaaacgaaccaaacgcggaaacaaactgaatcatcacct 32685976  T
Q  270 tcgttcatca 279  Q
    ||||||||||    
T  32685977 tcgttcatca 32685986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 46572569 - 46572639
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  46572569 gggagcggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacac 46572639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 47340326 - 47340256
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  47340326 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 47340256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 35737127 - 35737058
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctaca 125  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  35737127 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 35737058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 31660248 - 31660178
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||  ||||||||||||||||||||    
T  31660248 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacac 31660178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 32685839 - 32685909
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||||||||| |||||||||| ||| |||||||||||  ||||||||||||||||||||    
T  32685839 gggagcggttatggtgcataaggaaatccttatacaccgtgcataaatctcaacataattgcttcctacac 32685909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 15973856 - 15973925
Alignment:
Q  57 ggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||||||||||||||||||| ||||||||||||||  ||||||||||| |||||| |||||||||||||    
T  15973856 ggagcggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacatagttgcttcctacac 15973925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 16933136 - 16933200
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||| |||||||||||||| |||||||||||  ||||||||||||||||||||    
T  16933136 ggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacac 16933200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 16938519 - 16938583
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||| |||||||||||||| |||||||||||  ||||||||||||||||||||    
T  16938519 ggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacac 16938583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 34228600 - 34228654
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaaca 110  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  34228600 gggagtggttatggtgcataagaaaatccttatgcaccgtgcataaatcccaaca 34228654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 11732037 - 11732085
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||    
T  11732037 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatc 11732085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 763839 - 763798
Alignment:
Q  179 tgtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  763839 tgtgcataaatcccaacataattgcttcctacacccccaaag 763798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 46025108 - 46025056
Alignment:
Q  57 ggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaac 109  Q
    |||| |||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  46025108 ggagtggttatggtgcataaggaaatccctatgcaccgtgcataaatcctaac 46025056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 46358661 - 46358621
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  46358661 gtgcataaatcccaacataattgcttcctacacccccaaag 46358621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 47340288 - 47340248
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  47340288 gtgcataaatcccaacataattgcttcctacacccccaaag 47340248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 48830649 - 48830601
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||| |||||||||||||||| |||||||||||||| ||||||||||    
T  48830649 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 48830601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 25778844 - 25778882
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataa 101  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  25778844 gttatggtgcataagaaaattcttatgcactgtgcataa 25778882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 5728925 - 5728880
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||    
T  5728925 gcggttatggtgcataagaaaattcttatgcaccctgcataaatcc 5728880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 6620618 - 6620663
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||    
T  6620618 gcggttatggtgcataacgaaatccttatgcactatgcataaatcc 6620663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 26945759 - 26945714
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  26945759 gcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 26945714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 31660210 - 31660161
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaa 229  Q
    ||||||||||| ||||||||||||||||||||| |||||||  |||||||    
T  31660210 gtgcataaatctcaacataattgcttcctacacccccaaagtgaaccaaa 31660161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 38837774 - 38837729
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  38837774 gcggttatggtgcataaggaaatccttatgcaccttgcataaatcc 38837729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 41911037 - 41911086
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaa 229  Q
    ||||||||||||||||||||||||||||||||| | |||||  |||||||    
T  41911037 gtgcataaatcccaacataattgcttcctacaccctcaaagtgaaccaaa 41911086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 44426597 - 44426642
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  44426597 gcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 44426642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 45478559 - 45478514
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||||||||||||||||||||||   |||||||||||    
T  45478559 gcggttatggtgcataagaaaatccttatgcatcttgcataaatcc 45478514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 30884147 - 30884187
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  30884147 gtgcataaatcctaacataattgcttcctacacccccaaag 30884187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 35737089 - 35737049
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  35737089 gtgcataaatcccaacataattgcttcctacatccccaaag 35737049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 46345907 - 46345947
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaac 230  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  46345907 cccaacataattgcttcctacaccctcaaaggaaaccaaac 46345947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 15974146 - 15974181
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  15974146 gaatcttcaatctcatcatcaacaccgtcgttcatc 15974181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 15974994 - 15974955
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  15974994 gttatggtgcataaggaaatccttatgcaccgtgcataaa 15974955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 30428880 - 30428919
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  30428880 gttatggtgcataaggaaatccttatgcaccgtgcataaa 30428919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 44140117 - 44140156
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaa 229  Q
    ||||||||||||||||||| ||| ||||||||||||||||    
T  44140117 cccaacataattgcttccttcacccccaaaggaaaccaaa 44140156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 46004580 - 46004537
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||| ||||||||||||||  |||||||||    
T  46004580 gcggttatggtgcataaggaaatccttatgcaccctgcataaat 46004537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 46024034 - 46024073
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  46024034 gttatggtgcacaagaaaatccttatgcaccgtgcataaa 46024073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Complemental strand, 48691808 - 48691773
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  48691808 gaatcttcaatctcatcatcaacaccgtcgttcatc 48691773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 46004343 - 46004385
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||||  ||||||||||||||| |||||||||||    
T  46004343 gttatggtgcataacgaaatccttatgcactctgcataaatcc 46004385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 46025041 - 46024991
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaacaaaacgaacc 240  Q
    ||||||||||||||||||||||| |||||  |||||||||| |||| ||||    
T  46025041 cccaacataattgcttcctacacccccaagcgaaaccaaacgaaacaaacc 46024991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 6620850 - 6620813
Alignment:
Q  52 acttgggagcggttatggtgcataagaaaatccttatg 89  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  6620850 acttgggcgcggttatggtgcataaggaaatccttatg 6620813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 7843518 - 7843563
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||  |||||||||||||||||||  |||||||||||    
T  7843518 gcggttatggtgtctaagaaaatccttatgcacgctgcataaatcc 7843563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 12286768 - 12286723
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataa 101  Q
    ||||| |||||||||||||||| ||||| |||||||| ||||||||    
T  12286768 gggagtggttatggtgcataaggaaatctttatgcacagtgcataa 12286723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 16932584 - 16932539
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaacaaaac 235  Q
    |||||||||||||||||||||||  | |||||||||||||| ||||    
T  16932584 cccaacataattgcttcctacaccactaaaggaaaccaaacgaaac 16932539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 16937967 - 16937922
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaacaaaac 235  Q
    |||||||||||||||||||||||  | |||||||||||||| ||||    
T  16937967 cccaacataattgcttcctacaccactaaaggaaaccaaacgaaac 16937922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 31365270 - 31365315
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| |||||||||||||   |||||||||||    
T  31365270 gcggttatggtgcataaggaaatccttatgcatcttgcataaatcc 31365315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 33798782 - 33798733
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||| |||||||||||||||| |||||||||||||| || | |||||||    
T  33798782 gggagtggttatggtgcataaggaaatccttatgcaccgtacgtaaatcc 33798733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 34227675 - 34227720
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| |||||||||||||   |||||||||||    
T  34227675 gcggttatggtgcataaggaaatccttatgcaacctgcataaatcc 34227720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 43742248 - 43742293
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| |||||||||||||   |||||||||||    
T  43742248 gcggttatggtgcataaggaaatccttatgcatcctgcataaatcc 43742293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 44426844 - 44426799
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||| ||||||||  |||||||||||    
T  44426844 gcggttatggtgcataaggaaatctttatgcaccctgcataaatcc 44426799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 16933168 - 16933200
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    ||||||||||| |||||||||||||||||||||    
T  16933168 gtgcataaatctcaacataattgcttcctacac 16933200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 16938551 - 16938583
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    ||||||||||| |||||||||||||||||||||    
T  16938551 gtgcataaatctcaacataattgcttcctacac 16938583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 24360804 - 24360756
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    ||||| |||||||||||||||| ||||  |||||||| |||||||||||    
T  24360804 gggagtggttatggtgcataaggaaatatttatgcaccgtgcataaatc 24360756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 41065762 - 41065798
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgca 91  Q
    |||| |||||||||||||||||||||||| |||||||    
T  41065762 tgggcgcggttatggtgcataagaaaatctttatgca 41065798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 327
Target Start/End: Original strand, 23174435 - 23174592
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaac----------aaaacgaaccaaacgcggaaacaaactgaatcatcaccg 269  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||||||||     
T  23174435 gtgcataaatcccaacataattgcttcctacacccccaaaggaaaccaaacaaaataaaacaaaacgaaccaaacgcggaaacaaactgaatcatcacca 23174534  T
Q  270 tcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  23174535 tcgttcatcatcatcaccactggaatcttcaatctcatcatcaacaccgccgttcatc 23174592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 11422581 - 11422434
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatca 279  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| |||||||||| |||||||| |    
T  11422581 gtgcataaattccaacataattgcttcctacacccccaaaggaaaccaaacaaaacgaaccaaacgtgaaaacaaacttaatcatcaccatcgttcatta 11422482  T
Q  280 tcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||| |||||||||||| ||||||  ||||||||||    
T  11422481 tcatcaccactggaatcttcaatctcatcttcaacattgtcgttcatc 11422434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 184 - 326
Target Start/End: Complemental strand, 180860 - 180710
Alignment:
Q  184 ataaatcccaacataattgcttcctacactcccaaaggaa---------accaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgtt 274  Q
    ||||||||||||||||||||||||||||||||||||  ||         || |||||||||||||||||||||||| |||||||||||||||||||||||    
T  180860 ataaatcccaacataattgcttcctacactcccaaataaaccaaacaaaacaaaacaaaacgaaccaaacgcggaa-caaactgaatcatcaccgtcgtt 180762  T
Q  275 catcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcat 326  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  180761 catcatcatcaccactagaatcttcaatctcatcatcaacaccgtcgttcat 180710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 180 - 327
Target Start/End: Original strand, 8401435 - 8401597
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaac---------------gaaccaaacgcggaaacaaactgaatcat 264  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||||||||||||               |||||||||||| ||||||||||||||||    
T  8401435 gtgcataaatcccaacataattgtttcctacacctccaaaggaaaccaaacaaaacaaaacaaaacaaagcgaaccaaacgcgaaaacaaactgaatcat 8401534  T
Q  265 caccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  8401535 caccgtcgttcatcatcatcaccattggaatcttcaatctcatcatcaacaccgtcgttcatc 8401597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 34370528 - 34370392
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatca 279  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||| |||||||||||||||||           |||||||||| ||||||||||||||    
T  34370528 gtgcataaatcctaacataattgcttcctacacctccaaaggaaacaaaacaaaacgaaccaaa-----------actgaatcatgaccgtcgttcatca 34370440  T
Q  280 tcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  34370439 tcatcaccactggaatcttcaatctcatcatcaacaccgtcgttcatc 34370392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 191 - 325
Target Start/End: Complemental strand, 16117027 - 16116884
Alignment:
Q  191 ccaacataattgcttcctacactcccaaaggaa------------accaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatc 278  Q
    |||||||||||||||||||||| ||||||||||            |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16117027 ccaacataattgcttcctacacccccaaaggaaatcaaacgcaggaccaaacaaaacgaaccaaaggcggaaacaaactgaatcatcaccgtcgttcatc 16116928  T
Q  279 atcatcaccactggaattttcaatctcatcatcaacaccgtcgttca 325  Q
    ||||||||||| ||||| |||||||   |||||||||||||||||||    
T  16116927 atcatcaccaccggaatcttcaatc---tcatcaacaccgtcgttca 16116884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 239 - 327
Target Start/End: Original strand, 23921039 - 23921127
Alignment:
Q  239 ccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||| || ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23921039 ccaaacacgaaaataaactgaatcatcaccgtcgttcatcatcatcaccactggaatcttcaatctcatcatcaacaccgtcgttcatc 23921127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 222 - 327
Target Start/End: Original strand, 35197132 - 35197237
Alignment:
Q  222 aaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcg 321  Q
    |||| ||||||||| |||||||| || |||||||||||||||||| | | |||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  35197132 aaacaaaacaaaacaaaccaaacacgtaaacaaactgaatcatcatctttgttcatcatcatcaccatcggaatcttcaatctcatcatcaacaccgtcg 35197231  T
Q  322 ttcatc 327  Q
    ||||||    
T  35197232 ttcatc 35197237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 16976134 - 16976064
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  16976134 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacac 16976064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 23174399 - 23174467
Alignment:
Q  58 gagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  23174399 gagcggttatggtgcataagaaaattcttatgcaccgtgcataaatcccaacataattgcttcctacac 23174467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 23817490 - 23817419
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  23817490 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 23817419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 24636105 - 24636035
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  24636105 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 24636035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 48762218 - 48762288
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  48762218 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 48762288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 180 - 256
Target Start/End: Original strand, 4097142 - 4097223
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaacc-----aaacaaaacgaaccaaacgcggaaacaaac 256  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||     ||||||||||||||||||||||||||||||    
T  4097142 gtgcttaaatcccaacataattgcttcctacacccccaaaggaaaccaaacaaaacaaaacgaaccaaacgcggaaacaaac 4097223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 11422621 - 11422549
Alignment:
Q  54 ttgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||| | ||||||||||||||||||||    
T  11422621 ttgggagcggttatggtgcataaggaaatccttatgcatcgtgcataaattccaacataattgcttcctacac 11422549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 49936830 - 49936894
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  49936830 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 49936894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 19897647 - 19897717
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| ||||| |||||| ||||||||||||||||||||    
T  19897647 gggagtggttatggtgcataaggaaatccttatgcaccgtgcagaaatcccaacataattgcttcctacac 19897717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 21641589 - 21641659
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||||||||||| |||||||| |||||||||||||| ||||| |||||| ||||||||||||||||||||    
T  21641589 gggagcggttatgctgcataaggaaatccttatgcaccgtgcacaaatcccaacataattgcttcctacac 21641659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 23920966 - 23921036
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||||||||| |||||||||||||  |||||||||||| |||||||||| |||||||||    
T  23920966 gggagcggttatggtgcataaggaaatccttatgcatcgtgcataaatcccaacataattgtttcctacac 23921036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 25888916 - 25888985
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||    
T  25888916 gggagtggttatggtgcataaggaa-tccttatgcaccgtgcataaatcctaacataattgcttcctacac 25888985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 43452721 - 43452651
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||||    
T  43452721 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgtttcctacac 43452651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 180902 - 180831
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacact 127  Q
    |||||||||||||||| ||||  |||||||||||||| ||| |||||||| |||||||||||||||||||||    
T  180902 gggagcggttatggtgtataaagaaatccttatgcaccgtgtataaatcccaacataattgcttcctacact 180831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 20434608 - 20434679
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||| |||||||||||||||| ||||| ||||||||  ||||||||||| ||||||||||||||||||||    
T  20434608 tgggagtggttatggtgcataaggaaatcattatgcaccatgcataaatcccaacataattgcttcctacac 20434679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 4097105 - 4097174
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||||||||| || ||||||||||| |||| ||||||| ||||||||||||||||||||    
T  4097105 gggagcggttatggtgcataaggaa-tccttatgcaccgtgcttaaatcccaacataattgcttcctacac 4097174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 6314295 - 6314226
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctaca 125  Q
    ||||| |||||||||||||||| |||||||||||||| ||  |||||||| |||||||||||||||||||    
T  6314295 gggagtggttatggtgcataaggaaatccttatgcaccgtatataaatcccaacataattgcttcctaca 6314226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 18619006 - 18618944
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||||||||||||||    
T  18619006 gttatggtgcataaggaa-tccttatgcaccgtgcataaatcccaacataattgcttcctacac 18618944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 21641627 - 21641682
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaac 235  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  21641627 gtgcacaaatcccaacataattgcttcctacaccaccaaaggaaaccaaacaaaac 21641682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 104
Target Start/End: Original strand, 23319011 - 23319058
Alignment:
Q  57 ggagcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  23319011 ggagcggttatggtggataaggaaatccttatgcactgtgcataaatc 23319058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 45890642 - 45890595
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  45890642 gggagcggttatggtgtataagaaaatccttatgcaccgtgcataaat 45890595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 18057858 - 18057809
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  18057858 gggagcggttatggtgtataaggaaatccttatgcaccgtgcataaatcc 18057809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 34370537 - 34370496
Alignment:
Q  85 ttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  34370537 ttatgcaccgtgcataaatcctaacataattgcttcctacac 34370496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 18618976 - 18618936
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  18618976 gtgcataaatcccaacataattgcttcctacacccccaaag 18618936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 24636067 - 24636027
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  24636067 gtgcataaatcccaacataattgcttcctacacccccaaag 24636027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 32143814 - 32143770
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||    
T  32143814 gcggttatggtgcataaggaaatccttatgcactctgcataaatc 32143770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 49936862 - 49936902
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  49936862 gtgcataaatcccaacataattgcttcctacacccccaaag 49936902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 50351944 - 50351904
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  50351944 gtgcataaatcccaacataattgcttcctacacccccaaag 50351904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 50351956 - 50351912
Alignment:
Q  82 tccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  50351956 tccttatgcaccgtgcataaatcccaacataattgcttcctacac 50351912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 11354556 - 11354513
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||| ||||||||||||||| |||||||||    
T  11354556 gcggttatggtgcataagcaaatccttatgcactctgcataaat 11354513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 20434648 - 20434687
Alignment:
Q  181 tgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  20434648 tgcataaatcccaacataattgcttcctacacccccaaag 20434687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 23817451 - 23817412
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaa 219  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  23817451 gtgcataaatcccaacataattgcttcctacacccccaaa 23817412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 29945461 - 29945418
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||| ||||||||||||||| |||||||||    
T  29945461 gcggttatggtgcataaggaaatccttatgcactctgcataaat 29945418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 9628644 - 9628599
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  9628644 gcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 9628599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 21255835 - 21255884
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||| |||||||||||||||| |||||||||| ||| ||||||||||||    
T  21255835 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcc 21255884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 33156991 - 33157036
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  33156991 gcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 33157036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 42134178 - 42134133
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  42134178 gcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 42134133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 16976096 - 16976056
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  16976096 gtgcataaatcctaacataattgcttcctacacccccaaag 16976056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 24368657 - 24368625
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcac 92  Q
    |||||||||||||||||||||||||||||||||    
T  24368657 gcggttatggtgcataagaaaatccttatgcac 24368625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 25888953 - 25888993
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  25888953 gtgcataaatcctaacataattgcttcctacacccccaaag 25888993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 43452683 - 43452643
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  43452683 gtgcataaatcccaacataattgtttcctacacccccaaag 43452643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 48762256 - 48762288
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    |||||||||||||||||||||||||||||||||    
T  48762256 gtgcataaatcccaacataattgcttcctacac 48762288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Complemental strand, 180473 - 180438
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  180473 gaatcttcaatctcatcatcaacaccgtcgttcatc 180438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Complemental strand, 180613 - 180578
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  180613 gaatcttcaatctcatcatcaacaccgtcgttcatc 180578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 1395396 - 1395353
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||| ||||||||||||||  |||||||||    
T  1395396 gcggttatggtgcataaggaaatccttatgcaccatgcataaat 1395353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 10974632 - 10974675
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||| ||||||||||||||  |||||||||    
T  10974632 gcggttatggtgcataaggaaatccttatgcaccctgcataaat 10974675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 14229171 - 14229214
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||| ||||||||||||||  |||||||||    
T  14229171 gcggttatggtgcataaggaaatccttatgcaccctgcataaat 14229214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 17893073 - 17893116
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||| ||||||||||||||  |||||||||||    
T  17893073 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 17893116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 17893318 - 17893275
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||| ||||||||||||||  |||||||||    
T  17893318 gcggttatggtgcataaggaaatccttatgcaccctgcataaat 17893275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 18056791 - 18056830
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  18056791 gttatggtgcataaggaaatccttatgcaccgtgcataaa 18056830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 23921004 - 23921043
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaa 219  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  23921004 gtgcataaatcccaacataattgtttcctacacccccaaa 23921043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 31084451 - 31084404
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    ||||| |||||||||||||||| ||||||||||| || ||||||||||    
T  31084451 gggagtggttatggtgcataaggaaatccttatgtaccgtgcataaat 31084404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 9041096 - 9041055
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataa 101  Q
    |||||||||||||||||| ||||||||||||||  |||||||    
T  9041096 gcggttatggtgcataaggaaatccttatgcaccctgcataa 9041055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 12796422 - 12796467
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| |||||||| |||||  |||||||||||    
T  12796422 gcggttatggtgcataaggaaatccttctgcaccttgcataaatcc 12796467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 14229406 - 14229361
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||| ||||||||  |||||||||||    
T  14229406 gcggttatggtgcataaggaaatctttatgcaccctgcataaatcc 14229361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 18929000 - 18928955
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||| ||||||||  |||||||||||    
T  18929000 gcggttatggtgcataaggaaatctttatgcaccctgcataaatcc 18928955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 23319078 - 23319123
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaacaaaac 235  Q
    ||||||||||||||||||||||| |||||| ||||| |||| ||||    
T  23319078 cccaacataattgcttcctacacccccaaacgaaacaaaacgaaac 23319123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 31764018 - 31763973
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  | |||||||||    
T  31764018 gcggttatggtgcataaggaaatccttatgcaccctacataaatcc 31763973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 32595103 - 32595148
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| |||| |||||||||  |||||||||||    
T  32595103 gcggttatggtgcataaggaaattcttatgcaccctgcataaatcc 32595148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 45849111 - 45849152
Alignment:
Q  64 ttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||| ||||||||||||||  |||||||||||    
T  45849111 ttatggtgcataaggaaatccttatgcaccctgcataaatcc 45849152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 45890574 - 45890529
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaacaaaac 235  Q
    |||||||||||||||| ||||||||||||  |||||||||| ||||    
T  45890574 cccaacataattgctttctacactcccaagcgaaaccaaacgaaac 45890529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 6314253 - 6314217
Alignment:
Q  184 ataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||  |||||||    
T  6314253 ataaatcccaacataattgcttcctacatccccaaag 6314217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 8401423 - 8401467
Alignment:
Q  82 tccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||| || |||||||||||| |||||||||| |||||||||    
T  8401423 tccttatgtaccgtgcataaatcccaacataattgtttcctacac 8401467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 17811328 - 17811296
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcac 92  Q
    |||||||||||||||||| ||||||||||||||    
T  17811328 gcggttatggtgcataaggaaatccttatgcac 17811296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 19897685 - 19897717
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    ||||| |||||||||||||||||||||||||||    
T  19897685 gtgcagaaatcccaacataattgcttcctacac 19897717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 42133943 - 42133987
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||||||||||||||| |||||||||||||   ||||||||||    
T  42133943 gcggttatggtgcataaggaaatccttatgcatcctgcataaatc 42133987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 49992517 - 49992549
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcac 92  Q
    |||||||||||||||||| ||||||||||||||    
T  49992517 gcggttatggtgcataaggaaatccttatgcac 49992549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 8e-52; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 186 - 327
Target Start/End: Original strand, 24736610 - 24736748
Alignment:
Q  186 aaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatca 285  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||    
T  24736610 aaatcccaacataattgcttcctacacccccaaaggaaatcaaacaaaatgaaccaaacgcggaaacaaactgaatcatcaccgtcgt---tcatcatca 24736706  T
Q  286 ccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||| |||| |||||||||||||||||||| ||||||||||    
T  24736707 ccactagaatcttcaatctcatcatcaacactgtcgttcatc 24736748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 878401 - 878255
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactccc-aaaggaaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatc 278  Q
    |||||||||||||||||||||| |||||||||| ||| ||| ||||||||||||||| || ||||    ||| |||||||||||||||||||||||||||    
T  878401 gtgcataaatcccaacataattacttcctacaccccctaaaagaaaccaaacaaaacaaaacaaaac--gaaccaaactgaatcatcaccgtcgttcatc 878304  T
Q  279 atcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| |||||    
T  878303 atcatcaccactgaaatcttcaatctcatcatcaacaccgtcgctcatc 878255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 222 - 327
Target Start/End: Complemental strand, 18612289 - 18612184
Alignment:
Q  222 aaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcg 321  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||    
T  18612289 aaacaaaacaaaacgaaccaaacgcggaaacaaactaaatcatcaccgtcgttcatcatcatcaccaccgaaatcttcaatctcatcatcaacaccgtcg 18612190  T
Q  322 ttcatc 327  Q
    ||||||    
T  18612189 ttcatc 18612184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 180 - 327
Target Start/End: Original strand, 33345369 - 33345520
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaac-----gaaccaaacgcggaaacaaactgaatcatcaccgtcgtt 274  Q
    ||||||||||||||||||||||||||| |||||  |||||||||| ||||||||||     |||||||| ||||||||||||||||||||||||||||||    
T  33345369 gtgcataaatcccaacataattgcttc-tacacctccaaaggaaatcaaacaaaacaaaaagaaccaaatgcggaaacaaactgaatcatcaccgtcgtt 33345467  T
Q  275 catcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||||| || ||| || ||||||||||| |||||||| ||||||||||    
T  33345468 catcatcatcatcattggtatcttcaatctcattatcaacactgtcgttcatc 33345520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 191 - 327
Target Start/End: Complemental strand, 29163698 - 29163552
Alignment:
Q  191 ccaacataattgcttcctacactcccaaaggaaaccaaacaaaac----------gaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcat 280  Q
    ||||||||||||||||||| || ||||||||||||||||||||||          |||||||| ||||||||||||||||||||||| ||||||||||||    
T  29163698 ccaacataattgcttcctatacccccaaaggaaaccaaacaaaacaaaacaaaacgaaccaaatgcggaaacaaactgaatcatcactgtcgttcatcat 29163599  T
Q  281 catcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||| |||||| ||||||||||||| |||||||||||||||||    
T  29163598 catcaccattggaatcttcaatctcatcaacaacaccgtcgttcatc 29163552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 34869949 - 34870020
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  34869949 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacac 34870020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 1449721 - 1449651
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||    
T  1449721 gggagtggttatggtgcataagaaaatccttatgcaccgtgcataaatcccaacataattgtttcctacac 1449651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 6900982 - 6900912
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  6900982 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 6900912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 15493353 - 15493283
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  15493353 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 15493283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 878439 - 878369
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||||| ||||||||| ||||||||||    
T  878439 gggagcggttatggtgcataaggaaatccttatgtaccgtgcataaatcccaacataattacttcctacac 878369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 7089261 - 7089191
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| ||||||||||| || |||||||||||| ||||||||||||||||||||    
T  7089261 gggagtggttatggtgcataaggaaatccttatgtaccgtgcataaatcccaacataattgcttcctacac 7089191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 35121529 - 35121475
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaac 235  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||    
T  35121529 gtgcataaatcccaacataattgctt-ctacacccccaaaggaaatcaaacaaaac 35121475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 7765455 - 7765406
Alignment:
Q  54 ttgggagcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    ||||||| |||||||||||||||| |||||||||||||| ||||||||||    
T  7765455 ttgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 7765406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 22857722 - 22857677
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  22857722 gcggttatggtgcataagaaaatccttatgcaccctgcataaatcc 22857677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 6900944 - 6900904
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  6900944 gtgcataaatcccaacataattgcttcctacacccccaaag 6900904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 7089223 - 7089183
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  7089223 gtgcataaatcccaacataattgcttcctacacccccaaag 7089183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 15493315 - 15493275
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  15493315 gtgcataaatcccaacataattgcttcctacacccccaaag 15493275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 31216835 - 31216771
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||| |||| |||||| || ||| |||||| | ||||||||||||||||||||    
T  31216835 ggttatggtgcataaggaaattcttatggaccgtgtataaattccaacataattgcttcctacac 31216771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 24736574 - 24736612
Alignment:
Q  186 aaatcccaacataattgcttcctacactcccaaaggaaa 224  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  24736574 aaatcccaacataattgcttcctacacccccaaaggaaa 24736612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 10589004 - 10588955
Alignment:
Q  54 ttgggagcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    ||||| |||||||||||||||||| ||||||||||||||  |||||||||    
T  10589004 ttgggtgcggttatggtgcataaggaaatccttatgcaccctgcataaat 10588955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 15035033 - 15034992
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    ||||||||||||||| |||||||||||||| |||||||||||    
T  15035033 gttatggtgcataaggaaatccttatgcaccgtgcataaatc 15034992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 18755658 - 18755703
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataa 101  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||||    
T  18755658 gggagtggttatggtgcataaggaaatccttatgcacggtgcataa 18755703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 1449683 - 1449643
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  1449683 gtgcataaatcccaacataattgtttcctacacccccaaag 1449643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 1536821 - 1536861
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  1536821 gtgcataaatcccaatataattgcttcctacacccccaaag 1536861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 18612343 - 18612303
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaac 230  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  18612343 cccaacataattgtttcctacacccccaaaggaaaccaaac 18612303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 19284370 - 19284414
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||    
T  19284370 gcggttatggtgcataaggaaatccttatgcaccctgcataaatc 19284414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 21385034 - 21384990
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||    
T  21385034 gcggttatggtgcataaggaaatccttatgcaccctgcataaatc 21384990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Complemental strand, 878153 - 878118
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  878153 gaatcttcaatctcatcatcaacaccgtcgttcatc 878118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 12394438 - 12394399
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  12394438 gttatggtgcataaggaaatccttatgcaccgtgcataaa 12394399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 22857487 - 22857530
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||| ||||||||||||||  |||||||||    
T  22857487 gcggttatggtgcataaggaaatccttatgcaccctgcataaat 22857530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 24736856 - 24736891
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  24736856 gaatcttcaatctcatcatcaacaccgtcgttcatc 24736891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 30909482 - 30909439
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||| || ||||||||||| ||||||||||||    
T  30909482 ggttatggtgcataaggaattccttatgcaccgtgcataaatcc 30909439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 120
Target Start/End: Original strand, 33345356 - 33345395
Alignment:
Q  81 atccttatgcactgtgcataaatcctaacataattgcttc 120  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  33345356 atccttatgcaccgtgcataaatcccaacataattgcttc 33345395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 33346429 - 33346390
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  33346429 gttatggtgcataaggaaatccttatgcaccgtgcataaa 33346390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 120
Target Start/End: Complemental strand, 35121542 - 35121503
Alignment:
Q  81 atccttatgcactgtgcataaatcctaacataattgcttc 120  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  35121542 atccttatgcaccgtgcataaatcccaacataattgcttc 35121503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 25119520 - 25119470
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||| |||||||||||||||||| |||||||||||||   |||||||||||    
T  25119520 tgggtgcggttatggtgcataaggaaatccttatgcagcctgcataaatcc 25119470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 327
Target Start/End: Original strand, 33345621 - 33345651
Alignment:
Q  297 ttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||||||||||||||||||||||||||||||    
T  33345621 ttcaatctcatcatcaacaccgtcgttcatc 33345651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 7371143 - 7371098
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||||||||| ||||||||  ||| |||||||    
T  7371143 gcggttatggtgcataagaaaatctttatgcaccctgcttaaatcc 7371098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 10698571 - 10698620
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||| |||||||||||||||||| |||||||| |||||  ||||||||||    
T  10698571 tgggcgcggttatggtgcataaggaaatccttgtgcaccctgcataaatc 10698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 34869988 - 34870037
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaa 229  Q
    |||||||||||| ||||||||||||||||||||  ||||||  |||||||    
T  34869988 gtgcataaatcctaacataattgcttcctacacctccaaagtgaaccaaa 34870037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 34330197 - 34330045
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaacaaaacgaa-----ccaaacgcggaaacaaactgaatcatcaccgtcgtt 274  Q
    |||||||||| |||||||||||||||| ||||  ||||||||||| |||||||||  ||     ||||||||||||||||||||||||||||||||||||    
T  34330197 gtgcataaattccaacataattgcttcatacatccccaaaggaaatcaaacaaaagaaaacataccaaacgcggaaacaaactgaatcatcaccgtcgtt 34330098  T
Q  275 catcatcatcaccactggaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  34330097 catcatcatcaccactggaatcttcaatctgatcatcaacaccgtcgttcatc 34330045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 222 - 327
Target Start/End: Original strand, 16667775 - 16667880
Alignment:
Q  222 aaaccaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatcaccactggaattttcaatctcatcatcaacaccgtcg 321  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  16667775 aaacaaaacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcatcatcaccaccggaatcttcaatcgcatcatcaacaccgtcg 16667874  T
Q  322 ttcatc 327  Q
    ||||||    
T  16667875 ttcatc 16667880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 317
Target Start/End: Original strand, 28069282 - 28069429
Alignment:
Q  182 gcataaatcccaacataattgcttcctacactcccaaaggaaaccaaa----------caaaacgaaccaaacgcggaaacaaactgaatcatcaccgtc 271  Q
    |||||||| |||||||||||||||||||||| ||||||| |||| |||          ||||||||||||||||||||||||| |||||||||||||||     
T  28069282 gcataaattccaacataattgcttcctacacacccaaagaaaacaaaataaaataaaacaaaacgaaccaaacgcggaaacaa-ctgaatcatcaccgtt 28069380  T
Q  272 gttcat---catcatcaccactggaattttcaatctcatcatcaacacc 317  Q
    ||||||   |||||||| ||||||||| |||||||||||||||| ||||    
T  28069381 gttcatcatcatcatcatcactggaatcttcaatctcatcatcatcacc 28069429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 26637722 - 26637794
Alignment:
Q  54 ttgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  26637722 ttgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 26637794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 14394647 - 14394577
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  14394647 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 14394577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 14940243 - 14940313
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  14940243 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 14940313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 13553164 - 13553092
Alignment:
Q  54 ttgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||||| |||||||||||||||| |||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  13553164 ttgggagtggttatggtgcataaggaaatccttatgcaccgtgtataaatcctaatataattgcttcctacac 13553092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 37456860 - 37456789
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||| |||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  37456860 tgggagtggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacac 37456789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 2826098 - 2826199
Alignment:
Q  191 ccaacataattgcttcctacactcccaaaggaaacca----------aacaaaacgaaccaaacgcggaaacaaactgaatcatcaccgtcgttcatcat 280  Q
    |||||||||||||||||||||| ||||||| ||||||          |||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  2826098 ccaacataattgcttcctacacccccaaagaaaaccatacaaaacaaaacaaaacgaaccaaacgcggaaacaaacttaatcatcaccgttgttcatcat 2826197  T
Q  281 ca 282  Q
    ||    
T  2826198 ca 2826199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 3883922 - 3883992
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| || |||||||||||||||||    
T  3883922 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacac 3883992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 15416843 - 15416772
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacact 127  Q
    ||||| ||||||| |||||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  15416843 gggagtggttatgatgcataaggaaatccttatgcaccgtgcataaatcccaacatgattgcttcctacact 15416772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 30783637 - 30783567
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||| ||||||| |||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  30783637 tgggagtggttatgatgcataaggaaatccttatgcaccgtgcataaatcc-aacataattgcttcctacac 30783567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 28069242 - 28069312
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||| ||||| |||||||||||||| | |||||||| | ||||||||||||||||||||    
T  28069242 gggagcggttatggtgtataaggaaatccttatgcaccgagcataaattccaacataattgcttcctacac 28069312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 20134444 - 20134399
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||    
T  20134444 gcggttatggtgcataaggaaatccttatgcactctgcataaatcc 20134399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 13363842 - 13363794
Alignment:
Q  57 ggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  13363842 ggagcggttatggtgcacaaggaaatccttatgcaccgtgcataaatcc 13363794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 14394609 - 14394569
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  14394609 gtgcataaatcccaacataattgcttcctacacccccaaag 14394569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 14940281 - 14940321
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  14940281 gtgcataaatcccaacataattgcttcctacacccccaaag 14940321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 15416805 - 15416765
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  15416805 gtgcataaatcccaacatgattgcttcctacactcccaaag 15416765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 16667721 - 16667761
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaac 230  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  16667721 cccaacataattgcttcctacacccccaaaggaaaccaaac 16667761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 39086511 - 39086559
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||||    
T  39086511 tgggtgcggttatggtgcataagaaaatccttatgcaccctgcataaat 39086559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 37456820 - 37456781
Alignment:
Q  181 tgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  37456820 tgcataaatcccaacataattgcttcctacacccccaaag 37456781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 39166385 - 39166342
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||||||||||||||||||  |||||||||    
T  39166385 gcggttatggtgcataagaaaatccttatgcaccctgcataaat 39166342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 23948630 - 23948588
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgca 98  Q
    ||||| ||||||||||||||||||||||||||||||| |||||    
T  23948630 gggagtggttatggtgcataagaaaatccttatgcaccgtgca 23948588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 3340583 - 3340632
Alignment:
Q  54 ttgggagcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    ||||| |||||||||||||||||| ||||||||||||||  |||||||||    
T  3340583 ttgggtgcggttatggtgcataaggaaatccttatgcaccctgcataaat 3340632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 22695585 - 22695540
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  22695585 gcggttatggtgcataaggaaatccttatgcaccttgcataaatcc 22695540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 39861825 - 39861780
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  39861825 gcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 39861780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 11661026 - 11660982
Alignment:
Q  61 cggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  11661026 cggttatggtgcataaggaaatccttatgcaccctgcataaatcc 11660982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 26637762 - 26637794
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    |||||||||||||||||||||||||||||||||    
T  26637762 gtgcataaatcccaacataattgcttcctacac 26637794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 13362777 - 13362816
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  13362777 gttatggtgcataaggaaatccttatgcaccgtgcataaa 13362816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 15559048 - 15559091
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||| ||||||||||||||  |||||||||    
T  15559048 gcggttatggtgcataaggaaatccttatgcaccatgcataaat 15559091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 25017275 - 25017236
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  25017275 gttatggtgcataaggaaatccttatgcaccgtgcataaa 25017236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Original strand, 28069516 - 28069551
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  28069516 gaatcttcaatctcatcatcaacaccgtcgttcatc 28069551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 28070211 - 28070172
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaa 102  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  28070211 gttatggtgcataaggaaatccttatgcaccgtgcataaa 28070172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Complemental strand, 34329949 - 34329914
Alignment:
Q  292 gaattttcaatctcatcatcaacaccgtcgttcatc 327  Q
    |||| |||||||||||||||||||||||||||||||    
T  34329949 gaatcttcaatctcatcatcaacaccgtcgttcatc 34329914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 36864313 - 36864270
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||    
T  36864313 gcggttatggtgtataaggaaatccttatgcactctgcataaat 36864270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 20696377 - 20696327
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||| |||||||||||||||||| |||||||||| |||  |||||||||||    
T  20696377 tgggtgcggttatggtgcataaggaaatccttattcaccctgcataaatcc 20696327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 22830830 - 22830788
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||||| ||||||||||||||  |||||||||||    
T  22830830 gttatggtgcataaggaaatccttatgcacactgcataaatcc 22830788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 3340824 - 3340779
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||| |||| ||||||||||||||| || ||||||||    
T  3340824 gcggttatggtgcgtaaggaaatccttatgcactatgtataaatcc 3340779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 20134198 - 20134243
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| |||||||||||||   |||||||||||    
T  20134198 gcggttatggtgcataaggaaatccttatgcagcctgcataaatcc 20134243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 23155526 - 23155567
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||| ||||||||||||||  |||||||||    
T  23155526 ggttatggtgcataaggaaatccttatgcaccctgcataaat 23155567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 34330230 - 34330166
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctaca 125  Q
    |||| ||||||||||||||     ||||||||||||| |||||||||| | |||||||||||||| ||||    
T  34330230 gggatcggttatggtgcat-----aatccttatgcaccgtgcataaattccaacataattgcttcataca 34330166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 35662066 - 35662111
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  | |||||||||    
T  35662066 gcggttatggtgcataaggaaatccttatgcaccctacataaatcc 35662111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 35662278 - 35662233
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| |||| |||||||||  |||||||||||    
T  35662278 gcggttatggtgcataaggaaatacttatgcaccctgcataaatcc 35662233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 36864061 - 36864110
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||| |||||||||||||||||| |||| |||||||||  ||||||||||    
T  36864061 tgggtgcggttatggtgcataaggaaattcttatgcacactgcataaatc 36864110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 39086748 - 39086707
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    ||||||||||||||| ||||||||||||||| || |||||||    
T  39086748 gttatggtgcataaggaaatccttatgcactatgtataaatc 39086707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 3883960 - 3883992
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    ||||||||||||||| |||||||||||||||||    
T  3883960 gtgcataaatcccaatataattgcttcctacac 3883992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 11660792 - 11660824
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcac 92  Q
    |||||||||||||||||| ||||||||||||||    
T  11660792 gcggttatggtgcataaggaaatccttatgcac 11660824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 22672041 - 22671997
Alignment:
Q  61 cggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||||||||||| |||||||||||||   |||||||||||    
T  22672041 cggttatggtgcataaggaaatccttatgcatcctgcataaatcc 22671997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 25545617 - 25545585
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcac 92  Q
    |||||||||||||||||| ||||||||||||||    
T  25545617 gcggttatggtgcataaggaaatccttatgcac 25545585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 30783598 - 30783559
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  30783598 gtgcataaatcc-aacataattgcttcctacacccccaaag 30783559  T

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Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 39861579 - 39861623
Alignment:
Q  61 cggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    ||||||||| ||||||| ||||||||||||||  |||||||||||    
T  39861579 cggttatggggcataaggaaatccttatgcaccctgcataaatcc 39861623  T

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Target: scaffold0074 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 24454 - 24383
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  24454 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 24383  T

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Target: scaffold0074; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 24415 - 24366
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaaggaaaccaaa 229  Q
    ||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  24415 gtgcataaatcccaacataattgcttcctacacccccaaagtgaaccaaa 24366  T

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Target: scaffold0571 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 540 - 610
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||||||| || |||||||||||||||||    
T  540 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacac 610  T

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Target: scaffold0571; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 578 - 618
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  578 gtgcataaatcccaatataattgcttcctacacccccaaag 618  T

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Target: scaffold0045 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 33857 - 33793
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||||||| ||||| |||||||| |||||||||||| ||||||||||||||||||||    
T  33857 ggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaacataattgcttcctacac 33793  T

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Target: scaffold0045; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 33825 - 33785
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacactcccaaag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  33825 gtgcataaatcccaacataattgcttcctacacccccaaag 33785  T

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Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 101
Target Start/End: Original strand, 20978 - 21017
Alignment:
Q  62 ggttatggtgcataagaaaatccttatgcactgtgcataa 101  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  20978 ggttatggtgcataagaaaatccttatgcaccgtgcataa 21017  T

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Target: scaffold0189 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 101
Target Start/End: Complemental strand, 11248 - 11210
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataa 101  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  11248 gttatggtgcataaggaaatccttatgcactgtgcataa 11210  T

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Target: scaffold0581 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 8333 - 8378
Alignment:
Q  81 atccttatgcactgtgcataaatcctaacataattgcttcctacac 126  Q
    |||||||||||| |||||||||||| ||||||||||||| ||||||    
T  8333 atccttatgcaccgtgcataaatcccaacataattgctttctacac 8378  T

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Target: scaffold0581; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 8346 - 8378
Alignment:
Q  180 gtgcataaatcccaacataattgcttcctacac 212  Q
    |||||||||||||||||||||||||| ||||||    
T  8346 gtgcataaatcccaacataattgctttctacac 8378  T

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Target: scaffold0516 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 1293 - 1248
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  1293 gcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 1248  T

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Target: scaffold0249 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 23543 - 23588
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||    
T  23543 gcggttatggtgcataaggaaatccttatgcaccctgcataaatcc 23588  T

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Target: scaffold0249; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 23776 - 23736
Alignment:
Q  64 ttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||||||||||| ||||||||||||||  ||||||||||    
T  23776 ttatggtgcataaggaaatccttatgcaccctgcataaatc 23736  T

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Target: scaffold0194 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 28724 - 28675
Alignment:
Q  56 gggagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||||||| |||||||| ||||| |||| |||||||    
T  28724 gggagcggttatggtgcataaggaaatccttttgcaccgtgcttaaatcc 28675  T

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Target: scaffold0194; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 28656 - 28611
Alignment:
Q  190 cccaacataattgcttcctacactcccaaaggaaaccaaacaaaac 235  Q
    ||||||||||||||||||||||| |||||  |||||||||| ||||    
T  28656 cccaacataattgcttcctacacccccaagcgaaaccaaacgaaac 28611  T

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Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 80917 - 80880
Alignment:
Q  55 tgggagcggttatggtgcataagaaaatccttatgcac 92  Q
    |||| |||||||||||||||||||||||||||||||||    
T  80917 tgggtgcggttatggtgcataagaaaatccttatgcac 80880  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 96001 - 96042
Alignment:
Q  63 gttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    ||||||||||||||||||||||||||||||  ||||||||||    
T  96001 gttatggtgcataagaaaatccttatgcaccctgcataaatc 96042  T

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Target: scaffold0102 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 33615 - 33659
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatc 104  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||    
T  33615 gcggttatggtgcataaggaaatccttatgcaccctgcataaatc 33659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 20165 - 20122
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||| ||||||||||||||  |||||||||    
T  20165 gcggttatggtgcataaggaaatccttatgcaccctgcataaat 20122  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 72747 - 72704
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaat 103  Q
    |||||||||||||||||  ||||||||||||||| |||||||||    
T  72747 gcggttatggtgcataacgaaatccttatgcactctgcataaat 72704  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 202909 - 202956
Alignment:
Q  58 gagcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||||| ||||| |||||||| ||||| ||||||    
T  202909 gagcggttatggtgcataaggaaatcattatgcaccgtgcacaaatcc 202956  T

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Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 51908 - 51949
Alignment:
Q  64 ttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||| ||||||||||||||  |||||||||||    
T  51908 ttatggtgcataaggaaatccttatgcaccctgcataaatcc 51949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 17856 - 17900
Alignment:
Q  60 gcggttatggtgcataagaaaatccttatgcactgtgcataaatcc 105  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||    
T  17856 gcggttatggtgcataagaaaatcattatgcac-ctgcataaatcc 17900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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