View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10407_low_3 (Length: 341)
Name: NF10407_low_3
Description: NF10407
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10407_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 10 - 322
Target Start/End: Original strand, 14259566 - 14259878
Alignment:
| Q |
10 |
agtgagatgaacaataaatttaaacgtaaaaattacataatccatcagtgcaaaatcaaacatacactaacgctagtataaatagcatcggaaaaagaaa |
109 |
Q |
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| T |
14259566 |
agtgagatgaacaataaatttaaacgtaaaaattacataatccatcaccgcaaaatcaaacatacactaacgctagtataaatagcatcggaaaaagaaa |
14259665 |
T |
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| Q |
110 |
tgtagtaagatagtagtagtaagttattttatcaattaagtattattttttgaatatgtaaatctttactaatggttaagaaaaccagaacacaaggtgt |
209 |
Q |
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| T |
14259666 |
tgtagtaagatagtagtagtaagttattttatcaattaagtattattttttgaatatgtaaatctttactaatggttaggaaaaccagaacacaaggtgt |
14259765 |
T |
|
| Q |
210 |
agcaaacttgcccagctagaagaaaaaacctgatacaaaagcaccagaatcagtaacctgtatcagttgctacaatacaccatgaattattcctcaaact |
309 |
Q |
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| T |
14259766 |
accaaacttgcccagctagaagaaaaaacctgatacaaaagcaccagaatcagtaacctgtatcagttactacaatacaccatgaattattcttcaaact |
14259865 |
T |
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| Q |
310 |
tctcaatacaaaa |
322 |
Q |
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||||||||||||| |
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| T |
14259866 |
tctcaatacaaaa |
14259878 |
T |
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