View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10407_low_4 (Length: 237)
Name: NF10407_low_4
Description: NF10407
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10407_low_4 |
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Alignment Details
Target: chr6 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 6971762 - 6971982
Alignment:
| Q |
1 |
ccaacgtcaccttttttcccctgcattcatgggagaaaaacttaaggtattgaaaaatcgaggaaaatgtattcggtgcaattaggatatccctgcactc |
100 |
Q |
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|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||| |
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| T |
6971762 |
ccaacgtcacattgtttcccctgcattcatgggagaaaaacttaaggtattgaaaaatcgaggaaaacgtattcggtgcaattggggtatccctacactc |
6971861 |
T |
|
| Q |
101 |
acacagtcatgtattgccgattgttagatttacatcaaacatttcaaaaatacgtagattttattttattttcgaaaatttaatataccaagtttaaaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
6971862 |
acacagtcatgtattgccgattgttagatttacatcaaacatttcaaaaatacgtagattttattttattttcgaaaatttgatataccaagtttaaaat |
6971961 |
T |
|
| Q |
201 |
tataattgttcaatattgatc |
221 |
Q |
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|| ||||||| ||||||||| |
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| T |
6971962 |
taaaattgttacatattgatc |
6971982 |
T |
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