View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10408_high_6 (Length: 287)
Name: NF10408_high_6
Description: NF10408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10408_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 105 - 268
Target Start/End: Complemental strand, 30693444 - 30693281
Alignment:
| Q |
105 |
aatcatcttcctcctcaccgccaccaccagaactccaactcccgatatcctggccagaagacgcaaaactaaccatcgaatggatccaaaacctaaccct |
204 |
Q |
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| T |
30693444 |
aatcatcttcctcctcatcaccaccaccagaactccaactcccgatatcctggccagaagacgcaaaactaaccatcgaatggatccaaaacctaaccct |
30693345 |
T |
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| Q |
205 |
cgccttcgattggtcttccaagaatctccctgcttccgaattcccatccattctccccgttcat |
268 |
Q |
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| T |
30693344 |
cgccttcgattggtcttccaagaatctccctgcttccgaattcccatccattctccccgttcat |
30693281 |
T |
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