View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10408_low_4 (Length: 435)
Name: NF10408_low_4
Description: NF10408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10408_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 346; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 1 - 413
Target Start/End: Original strand, 34094879 - 34095291
Alignment:
| Q |
1 |
atgaaacatgttgaccactttttgtttgccatatttcaaaaggtatatgtactggcagccaggggcacaaccaaaaagcatgccagcagcaattcagatc |
100 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34094879 |
atgaaacatgctgaccactttttgtttgccatatttcaaaaggtatatgtactggcagccaggggcacaaccaaaaagcatgccagcagcaattcagatc |
34094978 |
T |
|
| Q |
101 |
ttttctcttgaccatgttttgggtgacaaaatggattccaacatatcaaaagggaaaatcccattaggggtttcgtttcaatagtaagacatgtttccta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |
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| T |
34094979 |
ttttctcttgaccatgttttgggtgacaaaatggattccaacatatcaaaagggaaaatcccattaggagttttgtttcaatagtaagacatgtttccta |
34095078 |
T |
|
| Q |
201 |
attaatcacatactaatcatttatgtattatcctggttagtgaaaatggacctacatcttgtcttttaattgaattaattaaatattgattaaaaagcaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34095079 |
attaatcacatactaatcatttatgtattatcctggttagtgaaaatggacctacatcttgtcttttaattgaattaattaaatattgattaaaaagcaa |
34095178 |
T |
|
| Q |
301 |
tcctattaagctctaannnnnnnnnnnnnnnnnactgtgataatacacgtgtggcgacattgcattggattaccagtctgtatctatcagcaagcagaaa |
400 |
Q |
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|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34095179 |
tcctattaagctctaatctctctttctctctctattgtgataatacacgtgtggcgacattgcattggattaccagtctgtatctatcagcaagcagaaa |
34095278 |
T |
|
| Q |
401 |
tgagtcaccccat |
413 |
Q |
| |
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||||||||||||| |
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| T |
34095279 |
tgagtcaccccat |
34095291 |
T |
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