View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10408_low_5 (Length: 419)
Name: NF10408_low_5
Description: NF10408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10408_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 403; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 1 - 403
Target Start/End: Original strand, 37817198 - 37817600
Alignment:
| Q |
1 |
acaactaattaaatccctgtgaataagctgagctcacattaaagatgactcgttgaagagaatgtaaatttacattatgtctgaaattgtttttagtaaa |
100 |
Q |
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| T |
37817198 |
acaactaattaaatccctgtgaataagctgagctcacattaaagatgactcgttgaagagaatgtaaatttacattatgtctgaaattgtttttagtaaa |
37817297 |
T |
|
| Q |
101 |
gtcttacatatcactaataagactcgattatcagagtttcatttctcacaaaaactattcccacgagtgagaagcacctatgtaaatgatctttatctat |
200 |
Q |
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| T |
37817298 |
gtcttacatatcactaataagactcgattatcagagtttcatttctcacaaaaactattcccacgagtgagaagcacctatgtaaatgatctttatctat |
37817397 |
T |
|
| Q |
201 |
tgtttgtgctgagttccgtggtaggatacacttatctaatagattaatcagattgctaaaaatgtaggcctaattttttagataaccccatttaaaacag |
300 |
Q |
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| T |
37817398 |
tgtttgtgctgagttccgtggtaggatacacttatctaatagattaatcagattgctaaaaatgtaggcctaattttttagataaccccatttaaaacag |
37817497 |
T |
|
| Q |
301 |
tcatgtttgcacatagaaagaccatgccccgacacactgaatttctcaactttctgcaactattttgttgttttgtgaagtagtggctaggctagatatt |
400 |
Q |
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| T |
37817498 |
tcatgtttgcacatagaaagaccatgccccgacacactgaatttctcaactttctgcaactattttgttgttttgtgaagtagtggctaggctagatatt |
37817597 |
T |
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| Q |
401 |
ggt |
403 |
Q |
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| T |
37817598 |
ggt |
37817600 |
T |
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