View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10409_low_7 (Length: 372)
Name: NF10409_low_7
Description: NF10409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10409_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 123 - 352
Target Start/End: Original strand, 22054918 - 22055160
Alignment:
| Q |
123 |
ttagacttcgggttgaacatactagttgtaggtaattgaattagccttctaaggatacagtaatcaaattaattgcatatttaactcaaaatatgatctg |
222 |
Q |
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| T |
22054918 |
ttagacttcgggctgaacatactagttgtaggtaattgaattagccttctaaggatacagtaatcaaattaattgcatatttaactcaaaatatgatctg |
22055017 |
T |
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| Q |
223 |
aacaccacactggtcattaacaaaaatcaaaatgatgaaaacgacgtccaagatgcaatacacgataacctacactcaaaacc-------------aagt |
309 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
22055018 |
aacaccacactggtcattaacaaaaatcaaaatgatgaaaatgacgtccaagatgcaatacacgataacctacactcaaaaccagtcttaagattaaagt |
22055117 |
T |
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| Q |
310 |
atggtgtttaaatcgtattacaatgaataatgaatggcttgct |
352 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22055118 |
atggtgtttaaatcgtattacaatgaataatgaatggcttgct |
22055160 |
T |
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