View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1040R-Insertion-9 (Length: 119)
Name: NF1040R-Insertion-9
Description: NF1040R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1040R-Insertion-9 |
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Alignment Details
Target: chr6 (Bit Score: 102; Significance: 4e-51; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 102; E-Value: 4e-51
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 1431771 - 1431872
Alignment:
| Q |
9 |
cagaacttctcatttcataaacattggtatacaattgttcaattgaagtatctacaacaccgtcgatggctaaatcaattgaatcactttgaatacttct |
108 |
Q |
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| T |
1431771 |
cagaacttctcatttcataaacattggtatacaattgttcaattgaagtatctacaacaccgtcgatggctaaatcaattgaatcactttgaatacttct |
1431870 |
T |
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| Q |
109 |
tg |
110 |
Q |
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| T |
1431871 |
tg |
1431872 |
T |
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