View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10410_low_4 (Length: 239)
Name: NF10410_low_4
Description: NF10410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10410_low_4 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 33453660 - 33453881
Alignment:
| Q |
1 |
taaattcattaaagaaacttttaattcagttttcatatagaaaaaagtttggtagaattggtcacatgttattattccttaactgcacaatatcaattat |
100 |
Q |
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| T |
33453660 |
taaattcattaaagaaacttttaattcagttttcatatagaaaaaagtttggtagaattggtcacatgttattattccttaactgcacaatatcaattat |
33453759 |
T |
|
| Q |
101 |
tagaaattatattgagcaatagtgtcagtcaatatttattgttatattcatcaagttttcatactttctgccacttttgcatctcttttacaaaagcctc |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33453760 |
tagaaattatattgagcaatagtatcagtcaatatttattgttatattcatcaagttttcatactttctgccacttttgcatctcttttacaaaagcctc |
33453859 |
T |
|
| Q |
201 |
ctaaggttctgttttcaacgtgc |
223 |
Q |
| |
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|||||||||| |||||||||||| |
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| T |
33453860 |
ctaaggttct-ttttcaacgtgc |
33453881 |
T |
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