View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10411_high_4 (Length: 331)
Name: NF10411_high_4
Description: NF10411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10411_high_4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 27751853 - 27752183
Alignment:
| Q |
1 |
tgaatccttcatggccctttgttttcttacagaagcaaaattgagaaatggtgaaatagaaatgctaccataaggttggattaataaatgagatttgata |
100 |
Q |
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| T |
27751853 |
tgaatccttcatggccctttgttttcttacacaagcagaattgagaaatggtgaaatagaaatgctaccataaggttggattaaaaaatgagatttgata |
27751952 |
T |
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| Q |
101 |
tgtatggtatgaagaggctacatatataagagtgacattttgccaaccataatattattaatgaatctatatctataggtgtagttggtagttgtggggg |
200 |
Q |
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| T |
27751953 |
tgtatggtatgaagaggctacatatataagagtgacattttgccaaccataatattattaatgaatctatatctataggtgtagttggtagttgtggggg |
27752052 |
T |
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| Q |
201 |
tccaattgcattactatgcagagtcaagagtaaatgcgcggctatagccattccgtgttgtaactgccaccactacacgcttctttcaaatccatgtatg |
300 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27752053 |
tccaattgcattactatgcagagtcaggagtaaatgcgcggctatagccattccgtgttgtaactgccaccactacacgcttctttcaaatccatgtatg |
27752152 |
T |
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| Q |
301 |
tatgcattcaatgtacttattagcatgctct |
331 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
27752153 |
tatgcattcaatgtacttattagcatgctct |
27752183 |
T |
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