View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10419_high_4 (Length: 447)

Name: NF10419_high_4
Description: NF10419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10419_high_4
NF10419_high_4
[»] chr7 (62 HSPs)
chr7 (16-431)||(660478-660909)
chr7 (352-431)||(14076686-14076765)
chr7 (352-431)||(14386714-14386793)
chr7 (353-422)||(6864791-6864860)
chr7 (370-431)||(19604464-19604525)
chr7 (352-431)||(29454086-29454165)
chr7 (359-431)||(19344565-19344637)
chr7 (355-431)||(29867244-29867320)
chr7 (355-431)||(29874519-29874595)
chr7 (351-431)||(29921975-29922055)
chr7 (288-430)||(20133236-20133378)
chr7 (333-431)||(22080876-22080974)
chr7 (357-431)||(29859462-29859536)
chr7 (370-431)||(18952906-18952967)
chr7 (370-431)||(18982953-18983014)
chr7 (370-431)||(18997599-18997660)
chr7 (345-430)||(19351045-19351130)
chr7 (354-431)||(24385209-24385286)
chr7 (355-428)||(29881267-29881340)
chr7 (358-430)||(12819905-12819977)
chr7 (355-431)||(13416897-13416973)
chr7 (360-431)||(9807832-9807903)
chr7 (355-430)||(19357919-19357994)
chr7 (369-432)||(19645630-19645693)
chr7 (357-432)||(20352102-20352177)
chr7 (354-416)||(18514772-18514834)
chr7 (357-430)||(26217976-26218049)
chr7 (342-403)||(29430974-29431035)
chr7 (355-431)||(20058043-20058119)
chr7 (340-432)||(20338931-20339023)
chr7 (358-430)||(24002208-24002280)
chr7 (370-430)||(29106823-29106883)
chr7 (369-428)||(1985955-1986014)
chr7 (356-415)||(36255390-36255449)
chr7 (346-428)||(15571872-15571954)
chr7 (373-431)||(19597659-19597717)
chr7 (94-140)||(22070781-22070827)
chr7 (358-403)||(24010419-24010464)
chr7 (361-430)||(26256784-26256853)
chr7 (354-431)||(29476325-29476402)
chr7 (358-431)||(36263061-36263134)
chr7 (367-431)||(22063650-22063714)
chr7 (351-431)||(22070119-22070199)
chr7 (367-431)||(22100501-22100565)
chr7 (371-431)||(29899382-29899442)
chr7 (359-431)||(36260261-36260333)
chr7 (359-430)||(15443973-15444044)
chr7 (371-430)||(19722027-19722086)
chr7 (357-432)||(20374491-20374566)
chr7 (376-431)||(22021400-22021455)
chr7 (355-430)||(22520250-22520325)
chr7 (376-431)||(29445663-29445718)
chr7 (371-417)||(19374778-19374824)
chr7 (369-431)||(19637217-19637279)
chr7 (371-409)||(22028658-22028696)
chr7 (344-398)||(29460043-29460097)
chr7 (359-409)||(46769401-46769451)
chr7 (360-397)||(20410709-20410746)
chr7 (354-430)||(20140803-20140879)
chr7 (358-430)||(20495796-20495868)
chr7 (354-430)||(24391423-24391499)
chr7 (360-400)||(35205915-35205955)
[»] chr6 (9 HSPs)
chr6 (350-431)||(20770658-20770739)
chr6 (353-428)||(17369675-17369750)
chr6 (369-428)||(6921350-6921409)
chr6 (369-428)||(6947880-6947939)
chr6 (369-428)||(6935218-6935277)
chr6 (371-428)||(6954521-6954578)
chr6 (373-423)||(14749413-14749463)
chr6 (373-422)||(6942971-6943020)
chr6 (359-431)||(24950134-24950206)
[»] chr4 (16 HSPs)
chr4 (350-431)||(11970963-11971044)
chr4 (360-431)||(53774848-53774919)
chr4 (358-431)||(3565752-3565825)
chr4 (358-431)||(3557734-3557807)
chr4 (332-428)||(3560921-3561017)
chr4 (355-431)||(11981669-11981745)
chr4 (357-431)||(1686273-1686347)
chr4 (341-415)||(53790577-53790651)
chr4 (359-431)||(35767026-35767098)
chr4 (352-431)||(53430082-53430161)
chr4 (358-416)||(19359160-19359218)
chr4 (367-428)||(8443452-8443513)
chr4 (367-422)||(6113096-6113151)
chr4 (358-408)||(19361473-19361523)
chr4 (370-431)||(6392832-6392893)
chr4 (363-431)||(837784-837852)
[»] chr5 (6 HSPs)
chr5 (352-431)||(18964813-18964892)
chr5 (341-431)||(24330871-24330961)
chr5 (348-431)||(29597531-29597614)
chr5 (348-431)||(29642367-29642450)
chr5 (361-431)||(29647684-29647754)
chr5 (388-431)||(23086790-23086833)
[»] chr3 (3 HSPs)
chr3 (341-431)||(3625742-3625832)
chr3 (367-431)||(25901277-25901341)
chr3 (367-431)||(25915295-25915359)
[»] chr1 (9 HSPs)
chr1 (357-431)||(39379049-39379123)
chr1 (341-431)||(21855355-21855445)
chr1 (351-431)||(4014947-4015027)
chr1 (341-430)||(4366467-4366556)
chr1 (331-431)||(15961236-15961336)
chr1 (369-431)||(4570935-4570997)
chr1 (353-430)||(10218994-10219071)
chr1 (352-428)||(4016755-4016831)
chr1 (369-428)||(50645485-50645544)
[»] chr2 (12 HSPs)
chr2 (351-416)||(14514923-14514988)
chr2 (358-431)||(18908798-18908871)
chr2 (358-431)||(18913546-18913619)
chr2 (358-431)||(18920754-18920827)
chr2 (369-431)||(554484-554546)
chr2 (358-431)||(2576890-2576963)
chr2 (359-431)||(2596015-2596087)
chr2 (379-431)||(21021279-21021331)
chr2 (368-423)||(25377090-25377145)
chr2 (370-431)||(2581326-2581387)
chr2 (390-431)||(20699461-20699502)
chr2 (368-408)||(537859-537899)
[»] scaffold0354 (1 HSPs)
scaffold0354 (357-431)||(7471-7545)
[»] scaffold0649 (1 HSPs)
scaffold0649 (367-431)||(5446-5510)
[»] chr8 (3 HSPs)
chr8 (357-409)||(27618521-27618573)
chr8 (370-431)||(29157056-29157117)
chr8 (367-431)||(29390294-29390358)
[»] scaffold0242 (2 HSPs)
scaffold0242 (354-431)||(13715-13792)
scaffold0242 (354-431)||(22550-22627)
[»] scaffold0867 (1 HSPs)
scaffold0867 (367-431)||(4667-4731)
[»] scaffold0064 (1 HSPs)
scaffold0064 (355-431)||(24213-24289)


Alignment Details
Target: chr7 (Bit Score: 357; Significance: 0; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 16 - 431
Target Start/End: Original strand, 660478 - 660909
Alignment:
Q  16 atgaatagaagcctgcaccacacgtaacatgggggataaacagaactataacaaatcttccaacatatattaattttgcaaaaatatattcatacttaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  660478 atgaatagaagcctgcaccacacgtaacatgggggataaacagaactatagcaaatcttccaacatatattaattttgcaaaaatatattcatacttaaa 660577  T
Q  116 ttcatgacagataatcaaggtctaaacaagtaaaccattgtaatatga-----------------cgtaaccaagctttcaacataatcctggacattga 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||||||||||||||||||||    
T  660578 ttcatgacagataatcaaggtctaaacaagtaaaccattgtaatatgaacttacattcaacaatacgtaaccaagctttcaacataatcctggacattga 660677  T
Q  199 accaccaagattttttgattctctttacgcttttatctctcctattatagagaattgctgaactttcacaactggttttcaataaatagtgtatcattct 298  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  660678 accaccaagattttttgattctctttatgcttttatctctccaattatagagaattgctgaactttcacaactggttttcaataa-tagtgtatcattct 660776  T
Q  299 tctccgaaagacgtattgttgacacataaaagttcaagtaattaaagttattatctatttgaagattatgataactaattttaaggaattgagtccaaga 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  660777 tctccgaaagacgtattgttgacacataaaagttcaagtaattaaagttattatctatttgaagattatgataactaattttaaggaattgagtccaaga 660876  T
Q  399 ctcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||||||||||||||||||||||    
T  660877 ctcttcaactcgaaattccttcatctgccatat 660909  T

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Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 352 - 431
Target Start/End: Complemental strand, 14076765 - 14076686
Alignment:
Q  352 tctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||    
T  14076765 tctatttgaagattctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatat 14076686  T

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Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 352 - 431
Target Start/End: Complemental strand, 14386793 - 14386714
Alignment:
Q  352 tctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||    
T  14386793 tctatttgaagattctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatat 14386714  T

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Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 353 - 422
Target Start/End: Original strand, 6864791 - 6864860
Alignment:
Q  353 ctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcat 422  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||    
T  6864791 ctatttgaagattatgataactagttttaaggaactgagtccaagactcttcaactccaaattccttcat 6864860  T

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Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 19604464 - 19604525
Alignment:
Q  370 taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||    
T  19604464 taactaattttaaggaattgagtccaggagtcttcaactccaaattccttcatctgccatat 19604525  T

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Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 431
Target Start/End: Original strand, 29454086 - 29454165
Alignment:
Q  352 tctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||  |||||||||||||||| ||||||||||||||| |||||||||| ||||| | ||||| |||||||    
T  29454086 tctatttgaagatcttgataactaattttaaagaattgagtccaagaatcttcaactccaaatttcatcatccgccatat 29454165  T

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Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 431
Target Start/End: Original strand, 19344565 - 19344637
Alignment:
Q  359 gaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||| ||| ||||||||||||| |||||||||||||| | |||||||| ||||||| |||||||||||||    
T  19344565 gaagattctgaaaactaattttaagaaattgagtccaagattgttcaactccaaattccatcatctgccatat 19344637  T

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Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 431
Target Start/End: Complemental strand, 29867320 - 29867244
Alignment:
Q  355 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| |||||||| |  |||| |||||| ||||||||    
T  29867320 atttgaagattatggtaactaattctaaggaattgagtccaagaatcttcaaccccgaatttcttcatttgccatat 29867244  T

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Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 431
Target Start/End: Complemental strand, 29874595 - 29874519
Alignment:
Q  355 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||||||| ||||||||||||||||| ||| |||||||||| |||||||| | ||||| |||||| ||||||||    
T  29874595 atttgaagattttgataactaattttaagtaatggagtccaagaatcttcaaccccaaatttcttcatttgccatat 29874519  T

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Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 351 - 431
Target Start/End: Original strand, 29921975 - 29922055
Alignment:
Q  351 atctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||| ||||||| |||||||||||| |||||||||||| |||||| |||||| | | ||||| |||||||||||||||    
T  29921975 atctattagaagattttgataactaattctaaggaattgagaccaagaatcttcatccccaaatttcttcatctgccatat 29922055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 430
Target Start/End: Original strand, 20133236 - 20133378
Alignment:
Q  288 tgtatcattcttctccgaaagacgtattgttgacacataaaagttcaagtaattaaagttattatctatttgaagattatgataactaattttaaggaat 387  Q
    ||||||| ||||||||||||| | || || | ||||   ||||||||| | |||||||| || || |||||||||||| ||||| ||||| ||||  ||     
T  20133236 tgtatcactcttctccgaaaggcataatggtaacacccgaaagttcaaatcattaaagtgatcatatatttgaagattgtgatagctaatgttaaataac 20133335  T
Q  388 tgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    ||| ||||||| |||||||||| |||||| ||||| |||||||    
T  20133336 tgaatccaagaatcttcaactccaaattctttcatttgccata 20133378  T

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Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 431
Target Start/End: Complemental strand, 22080974 - 22080876
Alignment:
Q  333 caagtaattaaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||  || ||||||||| ||||| |||||||||||||| |  ||  ||||||||||||||| ||||| ||||| |||||| ||||||||    
T  22080974 caagtaattaaagggatgatctatttggagattctgataactaattttgaataaccgagtccaagactcttgaactccaaattgcttcatttgccatat 22080876  T

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Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 431
Target Start/End: Complemental strand, 29859536 - 29859462
Alignment:
Q  357 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||||| ||||||||||||||||| ||| | |||||||| |||||||||| ||||| |||||||| ||||||    
T  29859536 ttgaagattgtgataactaattttaagaaatggggtccaagaatcttcaactccaaatttcttcatctcccatat 29859462  T

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Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 18952906 - 18952967
Alignment:
Q  370 taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||||||||||||| |||||||| ||||  ||||||| |||||||||||||||||||||    
T  18952906 taactaattttaaggaactgagtccatgacttgtcaactccaaattccttcatctgccatat 18952967  T

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Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 18982953 - 18983014
Alignment:
Q  370 taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||||||||||||| |||||||| ||||  ||||||| |||||||||||||||||||||    
T  18982953 taactaattttaaggaactgagtccaggacttgtcaactccaaattccttcatctgccatat 18983014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 18997599 - 18997660
Alignment:
Q  370 taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||||||||||||| |||||||| ||||  ||||||| |||||||||||||||||||||    
T  18997599 taactaattttaaggaactgagtccaggacttgtcaactccaaattccttcatctgccatat 18997660  T

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Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 430
Target Start/End: Original strand, 19351045 - 19351130
Alignment:
Q  345 gttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    ||||| ||| || |||||||  ||| |||||||||| |||||| ||||||||||||| ||||||| ||||||| ||||||||||||    
T  19351045 gttataatcaatgtgaagatcctgaaaactaattttgaggaatggagtccaagactcctcaactccaaattccatcatctgccata 19351130  T

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Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 431
Target Start/End: Complemental strand, 24385286 - 24385209
Alignment:
Q  354 tatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||||||||||||| |||||||||||| ||| || ||||||||| |||||||| ||| | |||||||| ||||||    
T  24385286 tatttgaagattatgatgactaattttaagaaatcgactccaagacttttcaactccaaagttcttcatcttccatat 24385209  T

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Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 428
Target Start/End: Complemental strand, 29881340 - 29881267
Alignment:
Q  355 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 428  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||| |||||||| | ||||| |||||| |||||    
T  29881340 atttgaagactatggtaactaattctaaggaattgagtccaagaatcttcaaccccaaatttcttcatttgcca 29881267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 358 - 430
Target Start/End: Original strand, 12819905 - 12819977
Alignment:
Q  358 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    |||||||| ||| |||| |||||||||||||||||||| || | |||||||| ||||||| ||||||||||||    
T  12819905 tgaagattctgacaactgattttaaggaattgagtccaggattgttcaactccaaattccgtcatctgccata 12819977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 431
Target Start/End: Original strand, 13416897 - 13416973
Alignment:
Q  355 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||| |||  ||||||||||||||| ||||| |  ||||||||||||||||| |||||||||||| ||||||||    
T  13416897 atttgaaaatttagataactaattttaacgaattcaacccaagactcttcaactccaaattccttcatttgccatat 13416973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 9807903 - 9807832
Alignment:
Q  360 aagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||| |||||| ||||| |||||| ||   |||||||||||||||||| |||||||||||||||||||||    
T  9807903 aagattctgataattaattgtaaggagtttcatccaagactcttcaactccaaattccttcatctgccatat 9807832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 430
Target Start/End: Complemental strand, 19357994 - 19357919
Alignment:
Q  355 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    ||||||||||  ||| |||||||||| | |||||||||||||||||||| ||||| ||||||| |||||| |||||    
T  19357994 atttgaagatcctgaaaactaatttttaagaattgagtccaagactcttgaactccaaattccatcatcttccata 19357919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 432
Target Start/End: Original strand, 19645630 - 19645693
Alignment:
Q  369 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatatt 432  Q
    ||||||||||||||| ||  ||||||| |||||||||| || ||||||||||||||||||||||    
T  19645630 ataactaattttaagtaacagagtccatgactcttcaattccaaattccttcatctgccatatt 19645693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 432
Target Start/End: Complemental strand, 20352177 - 20352102
Alignment:
Q  357 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatatt 432  Q
    ||||||||||| ||||||||||||||  | ||||||||| || |||||||||| |||||||||||| | |||||||    
T  20352177 ttgaagattatcataactaattttaaaaagttgagtccatgaatcttcaactccaaattccttcatttcccatatt 20352102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 416
Target Start/End: Original strand, 18514772 - 18514834
Alignment:
Q  354 tatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattc 416  Q
    ||||||||||||   |||||||||||||||||||||||||||||| | |||||||| ||||||    
T  18514772 tatttgaagattcatataactaattttaaggaattgagtccaagagttttcaactccaaattc 18514834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 357 - 430
Target Start/End: Complemental strand, 26218049 - 26217976
Alignment:
Q  357 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    |||||||||||| |||||||| ||||  ||||||| ||||||||||| ||||| | | ||||||||||||||||    
T  26218049 ttgaagattatggtaactaatcttaaataattgagaccaagactcttgaactccatactccttcatctgccata 26217976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 29430974 - 29431035
Alignment:
Q  342 aaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactctt 403  Q
    ||||| || ||||||||||||||  ||||||||||||||||||||||| |||||||| ||||    
T  29430974 aaagtcataatctatttgaagatcctgataactaattttaaggaattgggtccaagaatctt 29431035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 431
Target Start/End: Original strand, 20058043 - 20058119
Alignment:
Q  355 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||||||| | ||||||||||||||| ||||||  |||||||||||||||||  ||||||| ||| | ||||||    
T  20058043 atttgaagattttcataactaattttaagaaattgacaccaagactcttcaactctgaattcctccattttccatat 20058119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 432
Target Start/End: Complemental strand, 20339023 - 20338931
Alignment:
Q  340 ttaaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatatt 432  Q
    ||||||| || || ||||||||||||||  ||||| |||| || || |||||||||||| ||||||||||  ||||||||||| | |||||||    
T  20339023 ttaaagtgatcatatatttgaagattattgtaactgatttgaaagagttgagtccaagaatcttcaactcctaattccttcattttccatatt 20338931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 430
Target Start/End: Complemental strand, 24002280 - 24002208
Alignment:
Q  358 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||| |||||   | |||||||| |||||||    
T  24002280 tgaagattctgataactaatcttaagtaattgagtccaagactcttgaactccgtactccttcatatgccata 24002208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 29106883 - 29106823
Alignment:
Q  370 taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    |||||||||||||  | ||||||||||||||||||||| | ||||| ||||||||||||||    
T  29106883 taactaattttaaaaagttgagtccaagactcttcaaccccaaatttcttcatctgccata 29106823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 369 - 428
Target Start/End: Original strand, 1985955 - 1986014
Alignment:
Q  369 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 428  Q
    ||||||||||||||  |||||||||||||| |||||||| | |||||||||||| |||||    
T  1985955 ataactaattttaaacaattgagtccaagattcttcaacgccaaattccttcatttgcca 1986014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 415
Target Start/End: Complemental strand, 36255449 - 36255390
Alignment:
Q  356 tttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaatt 415  Q
    |||||||||| ||||| |||| ||||| || ||||||||||||||||||||||| |||||    
T  36255449 tttgaagattttgatagctaactttaatgagttgagtccaagactcttcaactccaaatt 36255390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 428
Target Start/End: Original strand, 15571872 - 15571954
Alignment:
Q  346 ttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 428  Q
    |||| ||| |||||||||||   ||||||||||||| ||||||||  ||||||||||||||||| ||| ||| |||| |||||    
T  15571872 ttataatccatttgaagatttgaataactaattttatggaattgaacccaagactcttcaactccaaactccctcatttgcca 15571954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 431
Target Start/End: Original strand, 19597659 - 19597717
Alignment:
Q  373 ctaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||| || || |||||||| ||||||||||||  |||||||||||||||||||||    
T  19597659 ctaattttgagaaactgagtccatgactcttcaacttcaaattccttcatctgccatat 19597717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 22070827 - 22070781
Alignment:
Q  94 caaaaatatattcatacttaaattcatgacagataatcaaggtctaa 140  Q
    |||||||||||||||||||||||| | |||||||||||||| |||||    
T  22070827 caaaaatatattcatacttaaatttaggacagataatcaagctctaa 22070781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 403
Target Start/End: Complemental strand, 24010464 - 24010419
Alignment:
Q  358 tgaagattatgataactaattttaaggaattgagtccaagactctt 403  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||||    
T  24010464 tgaagattctgataactaatcttaagtaattgagtccaagactctt 24010419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 430
Target Start/End: Complemental strand, 26256853 - 26256784
Alignment:
Q  361 agattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    |||||||| || ||||| ||||  ||||||||||||||||||| ||||| | | ||||||||||||||||    
T  26256853 agattatggtagctaatcttaaataattgagtccaagactcttgaactccatactccttcatctgccata 26256784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 431
Target Start/End: Original strand, 29476325 - 29476402
Alignment:
Q  354 tatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||| |||||||| |||||||| |||||||||||||| |  |||   |  ||||||||||||||||||||    
T  29476325 tatttgaagattttgataacttattttaagaaattgagtccaagagttgtcattccctaattccttcatctgccatat 29476402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 431
Target Start/End: Complemental strand, 36263134 - 36263061
Alignment:
Q  358 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||| | ||| |||| ||||| || ||||||||||||||||||||||| |||||| | ||||| ||||||    
T  36263134 tgaagattttcatagctaactttaatgagttgagtccaagactcttcaactccaaattcttccatcttccatat 36263061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 431
Target Start/End: Complemental strand, 22063714 - 22063650
Alignment:
Q  367 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||| |  || |||||||||||||||| || || |||||||||||| ||||||||    
T  22063714 tgataactaattttgaataactgagtccaagactcttgaaatccaaattccttcatttgccatat 22063650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 431
Target Start/End: Complemental strand, 22070199 - 22070119
Alignment:
Q  351 atctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||||| ||||| | |||||||||||| |  ||  ||||||||||||||| ||||| ||||| |||||| ||||||||    
T  22070199 atctatttggagattcttataactaattttgaataaccgagtccaagactcttgaactccaaattgcttcatttgccatat 22070119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 431
Target Start/End: Complemental strand, 22100565 - 22100501
Alignment:
Q  367 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||| |  || |||||||||||||||| ||||| ||||| |||||| ||||||||    
T  22100565 tgataactaattttgaataactgagtccaagactcttgaactccaaatttcttcatttgccatat 22100501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 29899442 - 29899382
Alignment:
Q  371 aactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||| |  ||||||||||| ||||||||||| | ||||| |||||||||||||||    
T  29899442 aactaatttttaaaaattgagtccaggactcttcaaccccaaatttcttcatctgccatat 29899382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 431
Target Start/End: Complemental strand, 36260333 - 36260261
Alignment:
Q  359 gaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||| ||||| ||||||||||  | |||| |||||||||||||||||| |||||| | ||||| ||||||    
T  36260333 gaagattttgatagctaattttaataagttgaatccaagactcttcaactccaaattcttccatcttccatat 36260261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 430
Target Start/End: Complemental strand, 15444044 - 15443973
Alignment:
Q  359 gaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    ||||||| || ||||| || ||||  ||||||||||||||||||||||||| | | |||||||| |||||||    
T  15444044 gaagattctggtaactcatcttaaataattgagtccaagactcttcaactccatactccttcatatgccata 15443973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 430
Target Start/End: Complemental strand, 19722086 - 19722027
Alignment:
Q  371 aactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    |||| ||||| ||||||||||||||||| |||| ||||| ||||||| |||||| |||||    
T  19722086 aactgattttgaggaattgagtccaagaatcttgaactccaaattccatcatcttccata 19722027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 432
Target Start/End: Original strand, 20374491 - 20374566
Alignment:
Q  357 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatatt 432  Q
    ||||||||||| ||||||||||||||  | |||| |||| || ||| |||||| |||||||||||| | |||||||    
T  20374491 ttgaagattattataactaattttaaaaagttgaatccatgaatctccaactccaaattccttcatttcccatatt 20374566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 431
Target Start/End: Complemental strand, 22021455 - 22021400
Alignment:
Q  376 attttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||| |||||||||||||| |||||||||| | | ||| |||||||||||||    
T  22021455 attttaagtaattgagtccaagattcttcaactccataatccatcatctgccatat 22021400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 430
Target Start/End: Original strand, 22520250 - 22520325
Alignment:
Q  355 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    ||||||||||| | ||||||||||| ||| | | |||||||||||||| |||||| ||| ||| |||| |||||||    
T  22520250 atttgaagattctcataactaatttgaagcagtggagtccaagactctacaactctaaaatccatcatatgccata 22520325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 431
Target Start/End: Original strand, 29445663 - 29445718
Alignment:
Q  376 attttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||| || |||||||||||||| |||||||| |  ||||||||||||||||||||    
T  29445663 atttttagaaattgagtccaagagtcttcaacccctaattccttcatctgccatat 29445718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 417
Target Start/End: Complemental strand, 19374824 - 19374778
Alignment:
Q  371 aactaattttaaggaattgagtccaagactcttcaactcgaaattcc 417  Q
    ||||||||||||| |||||||||||||||  |||||||| |||||||    
T  19374824 aactaattttaagaaattgagtccaagaccgttcaactccaaattcc 19374778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 431
Target Start/End: Original strand, 19637217 - 19637279
Alignment:
Q  369 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||||||   || |||| ||||||| ||||| |||||||||||| ||||||||    
T  19637217 ataactaattttaaggagccgaatccacgactcttgaactccaaattccttcatttgccatat 19637279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 409
Target Start/End: Complemental strand, 22028696 - 22028658
Alignment:
Q  371 aactaattttaaggaattgagtccaagactcttcaactc 409  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  22028696 aactaatcttaagtaattgagtccaagactcttcaactc 22028658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 398
Target Start/End: Original strand, 29460043 - 29460097
Alignment:
Q  344 agttattatctatttgaagattatgataactaattttaaggaattgagtccaaga 398  Q
    |||||| ||| ||||||||||| |||||||| |||||||||| |||| |||||||    
T  29460043 agttataatccatttgaagattttgataacttattttaaggatttgaatccaaga 29460097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 409
Target Start/End: Complemental strand, 46769451 - 46769401
Alignment:
Q  359 gaagattatgataactaattttaaggaattgagtccaagactcttcaactc 409  Q
    ||||||| || |||||||||||||| | ||||||||||| |||||||||||    
T  46769451 gaagattttggtaactaattttaagaagttgagtccaaggctcttcaactc 46769401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 397
Target Start/End: Complemental strand, 20410746 - 20410709
Alignment:
Q  360 aagattatgataactaattttaaggaattgagtccaag 397  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  20410746 aagattatgataactaattttaagaaattaagtccaag 20410709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 430
Target Start/End: Original strand, 20140803 - 20140879
Alignment:
Q  354 tatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    |||||||||||| ||||| ||||| ||||  |  ||| ||||||| | |||||||| |||||||||||| |||||||    
T  20140803 tatttgaagattgtgatagctaatgttaaaaagctgaatccaagaattttcaactccaaattccttcatttgccata 20140879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 430
Target Start/End: Complemental strand, 20495868 - 20495796
Alignment:
Q  358 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    |||||||| || ||||||||  |||| | || |||||||||||||||||||| |||||| | ||||| |||||    
T  20495868 tgaagattctggtaactaatcctaagcagttcagtccaagactcttcaactccaaattcttccatcttccata 20495796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 430
Target Start/End: Complemental strand, 24391499 - 24391423
Alignment:
Q  354 tatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    |||||||||||||| || |||||| ||||| |||||| ||||| | | |||||||| ||| | |||||||| |||||    
T  24391499 tatttgaagattatcattactaatgttaagaaattgactccaacatttttcaactccaaagttcttcatcttccata 24391423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 400
Target Start/End: Original strand, 35205915 - 35205955
Alignment:
Q  360 aagattatgataactaattttaaggaattgagtccaagact 400  Q
    |||||| ||||| |||| |||||||||||||||||||||||    
T  35205915 aagattgtgatagctaaatttaaggaattgagtccaagact 35205955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 431
Target Start/End: Complemental strand, 20770739 - 20770658
Alignment:
Q  350 tatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| || |||||||||||| ||||||||    
T  20770739 tatctatttgaagattatgataactaattttaaggaattgaatccatgactcttcaattccaaattccttcatttgccatat 20770658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 428
Target Start/End: Complemental strand, 17369750 - 17369675
Alignment:
Q  353 ctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 428  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| |||||||||||| |||||    
T  17369750 ctatttgaagattctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgcca 17369675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 369 - 428
Target Start/End: Original strand, 6921350 - 6921409
Alignment:
Q  369 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 428  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||    
T  6921350 ataactaattttaaggaattgagtccaagattcttcaactccaaattccttcatttgcca 6921409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 369 - 428
Target Start/End: Original strand, 6947880 - 6947939
Alignment:
Q  369 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 428  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||    
T  6947880 ataactaattttaaggaattgagtccaagattcttcaactccaaattccttcatttgcca 6947939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 428
Target Start/End: Original strand, 6935218 - 6935277
Alignment:
Q  369 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 428  Q
    |||||||||||||||||||| ||||||||| |||| ||||| |||||||||||| |||||    
T  6935218 ataactaattttaaggaatttagtccaagattcttgaactccaaattccttcatttgcca 6935277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 6954521 - 6954578
Alignment:
Q  371 aactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 428  Q
    ||||||||||||  |||||||||||||| |||||||||| |||||||||||| |||||    
T  6954521 aactaattttaatcaattgagtccaagattcttcaactccaaattccttcatttgcca 6954578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 14749463 - 14749413
Alignment:
Q  373 ctaattttaaggaattgagtccaagactcttcaactcgaaattccttcatc 423  Q
    |||||||| |||||||||||||||||||||| ||||| ||||||| |||||    
T  14749463 ctaattttgaggaattgagtccaagactcttgaactccaaattccatcatc 14749413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 373 - 422
Target Start/End: Original strand, 6942971 - 6943020
Alignment:
Q  373 ctaattttaaggaattgagtccaagactcttcaactcgaaattccttcat 422  Q
    ||||||||||||||||| ||| |||| |||||||||| ||||||||||||    
T  6942971 ctaattttaaggaattgcgtctaagattcttcaactccaaattccttcat 6943020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 431
Target Start/End: Original strand, 24950134 - 24950206
Alignment:
Q  359 gaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||||| ||||  |||||||||||||||| |||||||||| ||||||| ||| | | |||||| ||||||    
T  24950134 gaagattatcataatcaattttaaggaattgactccaagactcctcaactccaaacttcatcatcttccatat 24950206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 431
Target Start/End: Original strand, 11970963 - 11971044
Alignment:
Q  350 tatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||| |||||||||||| ||||||||    
T  11970963 tatctatttgaagattatgataactaattctaagaaattgagtccaagactcttccactccaaattccttcatttgccatat 11971044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 53774919 - 53774848
Alignment:
Q  360 aagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  53774919 aagattctgataactaattttaaggaattgagtccaagactcttcaactccaaattccttcatttgccatat 53774848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 358 - 431
Target Start/End: Complemental strand, 3565825 - 3565752
Alignment:
Q  358 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||    
T  3565825 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatat 3565752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 358 - 431
Target Start/End: Complemental strand, 3557807 - 3557734
Alignment:
Q  358 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||| ||||||||    
T  3557807 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatatgccatat 3557734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 332 - 428
Target Start/End: Original strand, 3560921 - 3561017
Alignment:
Q  332 tcaagtaattaaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 428  Q
    |||| ||| |||||| || ||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||| | |||||  |||||||||||    
T  3560921 tcaaataactaaagtcataatctaattgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattttttcatctgcca 3561017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 355 - 431
Target Start/End: Original strand, 11981669 - 11981745
Alignment:
Q  355 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||| |||||||||||||||| ||| ||||||| |||||||| |||| |||||||||||| ||||||||    
T  11981669 atttgaagattaagataactaattttaagaaatcgagtccaggactcttccactccaaattccttcatttgccatat 11981745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 431
Target Start/End: Original strand, 1686273 - 1686347
Alignment:
Q  357 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||| || |||||||  |||||| ||||||||||||||||| ||||| | |||||||||||||||||||||    
T  1686273 ttgaagatcataataactatatttaagaaattgagtccaagactcgtcaacgccaaattccttcatctgccatat 1686347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 415
Target Start/End: Complemental strand, 53790651 - 53790577
Alignment:
Q  341 taaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaatt 415  Q
    |||| |||||||||| ||||||||| ||| ||||||||||||| |||||||||||||| | ||||| || |||||    
T  53790651 taaaattattatctacttgaagattctgaaaactaattttaagaaattgagtccaagattgttcaaatccaaatt 53790577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 431
Target Start/End: Complemental strand, 35767098 - 35767026
Alignment:
Q  359 gaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||| |||||  |||||||||||| |||| |||||||||||||||||| |||||| | ||||| ||||||    
T  35767098 gaagattttgatagttaattttaaggagttgaatccaagactcttcaactccaaattcttccatcttccatat 35767026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 431
Target Start/End: Original strand, 53430082 - 53430161
Alignment:
Q  352 tctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||| ||||||||  || ||||||||||||||||||||||||||||| |||||  | | | ||| |||||||||||||||    
T  53430082 tctacttgaagatgttggtaactaattttaaggaattgagtccaagaatcttcggccccatatttcttcatctgccatat 53430161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 416
Target Start/End: Complemental strand, 19359218 - 19359160
Alignment:
Q  358 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattc 416  Q
    |||||||| ||||| ||||||||||  | ||||||||||||||||||||||| ||||||    
T  19359218 tgaagattttgatacctaattttaataagttgagtccaagactcttcaactccaaattc 19359160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 428
Target Start/End: Original strand, 8443452 - 8443513
Alignment:
Q  367 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 428  Q
    ||||||||||||||||  |||||| |||||||||| | ||||| ||| ||||||||||||||    
T  8443452 tgataactaattttaaataattgaatccaagactcgtgaactccaaaatccttcatctgcca 8443513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 422
Target Start/End: Complemental strand, 6113151 - 6113096
Alignment:
Q  367 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcat 422  Q
    ||||||||||||  |||||| |||||||||||||||| ||||| ||||||| ||||    
T  6113151 tgataactaattcgaaggaactgagtccaagactctttaactccaaattccatcat 6113096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 19361523 - 19361473
Alignment:
Q  358 tgaagattatgataactaattttaaggaattgagtccaagactcttcaact 408  Q
    |||||||| ||||| |||||||||| || |||||||||| |||||||||||    
T  19361523 tgaagattttgatacctaattttaatgagttgagtccaaaactcttcaact 19361473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 431
Target Start/End: Complemental strand, 6392893 - 6392832
Alignment:
Q  370 taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||  |||||| |||||||||| | ||||| ||| |||||||| ||||||||    
T  6392893 taactaattttaaataattgaatccaagactcgtgaactccaaaatccttcatttgccatat 6392832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 837852 - 837784
Alignment:
Q  363 attatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||||| ||||||||||  |||||| |||||||||||| ||| | ||| | |||||| ||||||||    
T  837852 attatgatagctaattttaaataattgaatccaagactcttgaacaccaaaattcttcatttgccatat 837784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 5e-23; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 352 - 431
Target Start/End: Original strand, 18964813 - 18964892
Alignment:
Q  352 tctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||    
T  18964813 tctatttgaagattctgataacaaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatat 18964892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 24330871 - 24330961
Alignment:
Q  341 taaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||| || ||||||| |||||||||| ||||||| |||||||| |||||||||||| |||||||| | |||||||||||||| ||||||    
T  24330871 taaagtcataatctattagaagattatggtaactaactttaaggagttgagtccaagaatcttcaaccccaaattccttcatctcccatat 24330961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 431
Target Start/End: Original strand, 29597531 - 29597614
Alignment:
Q  348 attatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||||  || ||||| ||| |||||||||||||||||||||||||||| | |||||||| ||||||  |||| ||||||||    
T  29597531 attatctacctgtagattttgaaaactaattttaaggaattgagtccaagattgttcaactccaaattcaatcatttgccatat 29597614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 431
Target Start/End: Complemental strand, 29642450 - 29642367
Alignment:
Q  348 attatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||| | | ||||| ||| |||||||||||||||||||||||||||| | ||||| || ||||||  |||| ||||||||    
T  29642450 attatctactagtagattctgaaaactaattttaaggaattgagtccaagattgttcaaatccaaattctatcatttgccatat 29642367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 431
Target Start/End: Complemental strand, 29647754 - 29647684
Alignment:
Q  361 agattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||| ||| |||||||||||||||||||||||||||| | ||||| || ||||||  |||| ||||||||    
T  29647754 agattttgaaaactaattttaaggaattgagtccaagattgttcaaatccaaattctatcatttgccatat 29647684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 431
Target Start/End: Complemental strand, 23086833 - 23086790
Alignment:
Q  388 tgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||    
T  23086833 tgagtccaagactcttgaactccaaactccttcatctgccatat 23086790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 341 - 431
Target Start/End: Complemental strand, 3625832 - 3625742
Alignment:
Q  341 taaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||| || ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||||||||    
T  3625832 taaagtcataatctaattgaagattttgataactaattttaagaaattgagtccaagactcttcaaccccaaatttcttcatttgccatat 3625742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 431
Target Start/End: Original strand, 25901277 - 25901341
Alignment:
Q  367 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||| |  |||||| |||||||||||| ||||||||| |||||||| | ||||||    
T  25901277 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatat 25901341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 431
Target Start/End: Original strand, 25915295 - 25915359
Alignment:
Q  367 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||| |  |||||| |||||||||||| ||||||||| |||||||| | ||||||    
T  25915295 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatat 25915359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 357 - 431
Target Start/End: Original strand, 39379049 - 39379123
Alignment:
Q  357 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||||||| | |||||||||||||||||||||    
T  39379049 ttgaagatcatgataactgattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatat 39379123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 21855355 - 21855445
Alignment:
Q  341 taaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||| || ||||||| |||||||||| ||||||| |||||||| |||||||||||| |||||||| | |||||||||||||| ||||||    
T  21855355 taaagtcataatctattagaagattatggtaactaactttaaggagttgagtccaagaatcttcaaccccaaattccttcatctcccatat 21855445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 351 - 431
Target Start/End: Original strand, 4014947 - 4015027
Alignment:
Q  351 atctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||| |||||| ||| ||||||| ||||||||||||||||||||| |||||||| | ||||| |||||||||||||||    
T  4014947 atctattagaagatcatggtaactaactttaaggaattgagtccaagaatcttcaaccccaaatttcttcatctgccatat 4015027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 430
Target Start/End: Original strand, 4366467 - 4366556
Alignment:
Q  341 taaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    ||||||| | ||||||||||||||| || ||||||| |||||| ||| ||||||||||||||||||| |  |||| ||||||||||||||    
T  4366467 taaagttgtaatctatttgaagattctggtaactaactttaagaaatggagtccaagactcttcaaccccgaatttcttcatctgccata 4366556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 15961336 - 15961236
Alignment:
Q  331 ttcaagtaattaaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    ||||||| |||||||| || || |||||||||||||| |||| ||| ||||| ||||||||||||||| |||||| ||| ||||| |||||| | |||||    
T  15961336 ttcaagtcattaaagtgatcatatatttgaagattataataattaactttaaagaattgagtccaagattcttcagctccaaatttcttcattttccata 15961237  T
Q  431 t 431  Q
    |    
T  15961236 t 15961236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 369 - 431
Target Start/End: Complemental strand, 4570997 - 4570935
Alignment:
Q  369 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||||||||||| |||||||||||||| |||||||| | ||||| |||||| ||||||||    
T  4570997 ataactaattttaagcaattgagtccaagaatcttcaaccccaaatttcttcatttgccatat 4570935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 430
Target Start/End: Complemental strand, 10219071 - 10218994
Alignment:
Q  353 ctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 430  Q
    ||||| ||||| |||| |||||||||||||| |||||||||||||| |||||||  | ||||| |||||| |||||||    
T  10219071 ctattcgaagagtatggtaactaattttaagtaattgagtccaagaatcttcaatcccaaatttcttcatttgccata 10218994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 428
Target Start/End: Original strand, 4016755 - 4016831
Alignment:
Q  352 tctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 428  Q
    |||||| |||||| ||| ||||||| |||||  || |||||||| || |||||||||| ||||| ||||||||||||    
T  4016755 tctattagaagatcatggtaactaaatttaaacaactgagtccaggaatcttcaactccaaatttcttcatctgcca 4016831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 428
Target Start/End: Original strand, 50645485 - 50645544
Alignment:
Q  369 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 428  Q
    ||||||||||||||  |||||| |||||||||||| ||||| ||| |||||||| |||||    
T  50645485 ataactaattttaaataattgaatccaagactcttgaactccaaaatccttcatttgcca 50645544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 351 - 416
Target Start/End: Complemental strand, 14514988 - 14514923
Alignment:
Q  351 atctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattc 416  Q
    |||||||||||||||   |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  14514988 atctatttgaagattcatataactaattttaaggaattgagtccaagaatcttcaactccaaattc 14514923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 431
Target Start/End: Original strand, 18908798 - 18908871
Alignment:
Q  358 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||| ||||| ||||||| |||||| ||||||    
T  18908798 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatat 18908871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 431
Target Start/End: Original strand, 18913546 - 18913619
Alignment:
Q  358 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||| ||||| ||||||| |||||| ||||||    
T  18913546 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatat 18913619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 431
Target Start/End: Original strand, 18920754 - 18920827
Alignment:
Q  358 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||| ||||| ||||||| |||||| ||||||    
T  18920754 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatat 18920827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 431
Target Start/End: Complemental strand, 554546 - 554484
Alignment:
Q  369 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||||||||||| ||||||||||||||||||| ||||| | ||||  |||| ||||||||    
T  554546 ataactaattttaagtaattgagtccaagactctttaactccatattctatcatttgccatat 554484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 431
Target Start/End: Complemental strand, 2576963 - 2576890
Alignment:
Q  358 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||| || |||||||||||||||| ||||||||| | ||||||||||| ||    |||||||||||||||    
T  2576963 tgaagattttggtaactaattttaaggagttgagtccatggctcttcaactccaatgatcttcatctgccatat 2576890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 431
Target Start/End: Complemental strand, 2596087 - 2596015
Alignment:
Q  359 gaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||| || |||||||||||||||| ||||||||| | ||||||||||| ||    |||||||||||||||    
T  2596087 gaagattttggtaactaattttaaggagttgagtccatggctcttcaactccaataatcttcatctgccatat 2596015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 21021279 - 21021331
Alignment:
Q  379 ttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||| |||| |||||| |||| |||||||| |||||||||||||||||||||    
T  21021279 ttaagcaatttagtccatgacttttcaactctaaattccttcatctgccatat 21021331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 423
Target Start/End: Complemental strand, 25377145 - 25377090
Alignment:
Q  368 gataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatc 423  Q
    |||||||||||||||  |||||| |||||||||||| ||||| ||| |||||||||    
T  25377145 gataactaattttaaataattgaatccaagactcttgaactccaaaatccttcatc 25377090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 431
Target Start/End: Complemental strand, 2581387 - 2581326
Alignment:
Q  370 taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||||| ||||||||| ||||| ||||||| ||    |||||||||||||||    
T  2581387 taactaattttaaggagttgagtccatgactcgtcaactccaatgatcttcatctgccatat 2581326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 20699461 - 20699502
Alignment:
Q  390 agtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||| ||||||||||||||||  |||||||||||||    
T  20699461 agtccaagacgcttcaactcgaaattctctcatctgccatat 20699502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 408
Target Start/End: Original strand, 537859 - 537899
Alignment:
Q  368 gataactaattttaaggaattgagtccaagactcttcaact 408  Q
    ||||||||||||||||| ||| ||| |||||||||||||||    
T  537859 gataactaattttaagggattcagttcaagactcttcaact 537899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0354 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 431
Target Start/End: Complemental strand, 7545 - 7471
Alignment:
Q  357 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||  |||| ||||||||||||||||||  ||||||||| ||||||| |||||||||||| ||||||||    
T  7545 ttgaagattccgatagctaattttaaggaattgaacccaagactcatcaactccaaattccttcatttgccatat 7471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0649 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 431
Target Start/End: Complemental strand, 5510 - 5446
Alignment:
Q  367 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||| |||||||||   |||||||||||||||||||| |||||  ||||||||||||||    
T  5510 tgataactaaatttaaggaacatagtccaagactcttcaactctaaattttttcatctgccatat 5446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 409
Target Start/End: Complemental strand, 27618573 - 27618521
Alignment:
Q  357 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactc 409  Q
    ||||||||| |||||||||| |||||| || ||||||||||||||||||||||    
T  27618573 ttgaagattctgataactaactttaagcaactgagtccaagactcttcaactc 27618521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 431
Target Start/End: Complemental strand, 29157117 - 29157056
Alignment:
Q  370 taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||||| ||||||||| | ||||||||||| ||||   | ||||||||||||    
T  29157117 taactaattttaaggagttgagtccatggctcttcaactccaaatgtttccatctgccatat 29157056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 431
Target Start/End: Complemental strand, 29390358 - 29390294
Alignment:
Q  367 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||| || ||  |||| ||| ||||| |||||||||| ||||||| |||||||||||||    
T  29390358 tgataactaaattgaaacaatttagttcaagattcttcaactccaaattccctcatctgccatat 29390294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 431
Target Start/End: Original strand, 13715 - 13792
Alignment:
Q  354 tatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||| ||||| || |||||||| || ||||||||||| || |||  ||  ||||||||||||||||||||    
T  13715 tatttgaagattttgataccttattttaagaaactgagtccaagattcatcatttcctaattccttcatctgccatat 13792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 431
Target Start/End: Original strand, 22550 - 22627
Alignment:
Q  354 tatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||| ||||| || |||||||| || ||||||||||| || |||  ||  ||||||||||||||||||||    
T  22550 tatttgaagattttgataccttattttaagaaactgagtccaagattcatcatttcctaattccttcatctgccatat 22627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 431
Target Start/End: Original strand, 4667 - 4731
Alignment:
Q  367 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    |||||||||||||| |  || |||||||||||||||| ||||| ||||| |||||| ||||||||    
T  4667 tgataactaattttgaataactgagtccaagactcttgaactccaaatttcttcatttgccatat 4731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 431
Target Start/End: Complemental strand, 24289 - 24213
Alignment:
Q  355 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 431  Q
    ||||||||||  ||||| |||| ||||||||||||||| ||||||| |||| ||| | ||||  |||||| ||||||    
T  24289 atttgaagatcgtgatagctaaatttaaggaattgagttcaagacttttcatctccatattctgtcatcttccatat 24213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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