View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10419_high_9 (Length: 348)
Name: NF10419_high_9
Description: NF10419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10419_high_9 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 336; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 1 - 348
Target Start/End: Original strand, 43451870 - 43452217
Alignment:
| Q |
1 |
tgatgggatgattggcgagttacgctgtgcaatcaataacctgtacatgtcagagattctccaggaatctgaaatggcggctcttcaaatagagaagttg |
100 |
Q |
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| T |
43451870 |
tgatgggatgattggcgagttacgctgtgcaatcaataacctgtacatgtcagagattctccaggaatctgaaatggcggctcttcaaatagagaaattg |
43451969 |
T |
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| Q |
101 |
tggagaggagggaatctgggagtggatatccacagcatgctatcaaaacctccaattattaatgggtttgtggagatacttttcaattctgttgaacccc |
200 |
Q |
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| T |
43451970 |
tggagaggagggaatctgggagtggatatccacagcatgctatcaaaacctccaattattaatgggtttgtggagatacttttcaattctgttgaacccc |
43452069 |
T |
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| Q |
201 |
aggttcttcaggcagcagttttccttctggctgagatgggatctagagacaattctgttattcagactctaacacgcgtgaataccgacgttgaatgtat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
43452070 |
aggttcttcaggcagcagttttccttctggctgagatgggatctagagacaattctgttattcagactctaacacgcgtggataccgacgttgaatgtat |
43452169 |
T |
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| Q |
301 |
aatggctcttttcaagaaagggttgacagaagctgttgtgctactgta |
348 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
43452170 |
aatggctcttttcaagaaagggttgacagaagctgttgtgctattgta |
43452217 |
T |
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