View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10419_low_22 (Length: 251)
Name: NF10419_low_22
Description: NF10419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10419_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 10595279 - 10595517
Alignment:
| Q |
1 |
gaccactaagcaagcagatttcgcataagatagctccaaggtaagttctatcttttaaaacagggtctttgagcttctctataacatttttgcagtcact |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10595279 |
gaccactaagcaagcagatttcgcataagatagctccaaggtaagttctatcttttaaaacagggtctttgagcttctctataacatttttgcagtcact |
10595378 |
T |
|
| Q |
101 |
ttcaaaaatgatcttacgaaaacctgcagacaccgcaagaaccattccggcat-aattccataagcttccgccgtttttgcacaataaaaaccattcctg |
199 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10595379 |
ttcaaaaatgatcttacgaaaacctgcaaacaccgcaagaaccattccggcataaattccataagcttccgccgtttttgcacaataaaaaccattcctg |
10595478 |
T |
|
| Q |
200 |
ctccaagtcgccgatagcttcacattaccatcctcgcct |
238 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
10595479 |
ctccaagtcgccgatagcttcacattaccatcctcgcct |
10595517 |
T |
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