View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10419_low_26 (Length: 243)
Name: NF10419_low_26
Description: NF10419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10419_low_26 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 23622787 - 23623013
Alignment:
| Q |
1 |
attttggtagattgacaaggtttgcttcaaaatcaacatatagatgattgcagatttctacaagccaagctttctctcgaagaggcggcgaagaaggtaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23622787 |
attttggtagattgacaaggtttgcttcaaaatcaacatacagatgattgcagatttctacaagccaagctttctctcgaagaggcggcgaagaaggtaa |
23622886 |
T |
|
| Q |
101 |
acttggagggtgctggctccaattagtgctgctgattcaagtaaggccttgtgaattgctctggaactcattgcattatttactgcagtaaataaacaca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
23622887 |
acttggagggtgctggctccaattagtgctgctgattcaagtaaggccttgtgaattgctctggagctcattgcattatttactgcagtaaataaacaca |
23622986 |
T |
|
| Q |
201 |
actcttaattagatgtagactctatgt |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
23622987 |
actcttaattagatgtagactctatgt |
23623013 |
T |
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