View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10419_low_27 (Length: 242)
Name: NF10419_low_27
Description: NF10419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10419_low_27 |
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Alignment Details
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 4 - 223
Target Start/End: Complemental strand, 4838931 - 4838712
Alignment:
| Q |
4 |
aaacttttctcaccttcttaataatgtgtctgtagggatcaaaccagagtctttctctacaaacttagtgtttaaaaaacttaactacacttgataattt |
103 |
Q |
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| T |
4838931 |
aaacttttctcaccttcttaataatgtgtctgtagggatcaaaccagagtctttctctacaaacttagtgtttaaaaaacttaactacacttgataattt |
4838832 |
T |
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| Q |
104 |
aagactttgaatttcttttttcaaatttctccaacttagagcaacttgaagtggggaccaggccagtgaatgaaggacagagcacatagagtctagagga |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4838831 |
aagactttgaatttcttttttcaaatttctccaacttagagcaacttgaagtggggaccaggccagtgaatgaaggacagagcacatagagtctagagga |
4838732 |
T |
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| Q |
204 |
ggaagatgaacagtgatgtg |
223 |
Q |
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|||||||||||||||||||| |
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| T |
4838731 |
ggaagatgaacagtgatgtg |
4838712 |
T |
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