View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10421_low_8 (Length: 311)
Name: NF10421_low_8
Description: NF10421
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10421_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 4 - 266
Target Start/End: Original strand, 28203400 - 28203664
Alignment:
| Q |
4 |
ggagaagcaaaggcaagacacgtgtgattcacagaaactctaagttatggttgagtgacacgcaactatatgtgttggacaaatttaacatattattgac |
103 |
Q |
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| T |
28203400 |
ggagaagcaaagccaagacacgtgtgattcacagaaactctaagttatggttgagtgacacgcaactatatgtgttggacaaatt-aacatattattgac |
28203498 |
T |
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| Q |
104 |
aacaaagaatattacttattttatctgtcttattatatgcctagtttaagattacacactacttttaaaaaataccctatgataaccgacattttaattt |
203 |
Q |
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| T |
28203499 |
aacacaaaatattacttattttatctgtcttattataagcctagtttaagattacacactacttttaaaaaataccctatgataaccgacattttaattt |
28203598 |
T |
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| Q |
204 |
gcaaag---gnnnnnnngttaaaaatacgtttagcaaaataattattttgagtgtaaatcatgaca |
266 |
Q |
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| T |
28203599 |
gcaaaggaagaaaaaaaatgaaaaatacgtttagcaaaataattattttgagtgtaaatcatgaca |
28203664 |
T |
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