View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10422_low_18 (Length: 324)
Name: NF10422_low_18
Description: NF10422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10422_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 16 - 297
Target Start/End: Complemental strand, 43628602 - 43628322
Alignment:
| Q |
16 |
gacatcatgttggatgaaaatacttttatcatttttctcaatgatattttccaatatttagtagacattacctagtaagttttaatagagatttatatat |
115 |
Q |
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| T |
43628602 |
gacatcatgttggatgaaaatacttt-atcatttttctcaatgatattttccaatatttagtagactatacctagtaagtttttatagagatttatatat |
43628504 |
T |
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| Q |
116 |
ttaatgtatcggaaaatgaagtatatgnnnnnnnnaatgctcttactaatttaaaattcttaataaaactattaagaaattcgttaagaagatccaaaat |
215 |
Q |
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| T |
43628503 |
ttaatgtatcggaaaatgaagtatatgttatttttaatactcttactaatttaaaattcttaataaaactattaagaaattcgttaagaagatccaaaat |
43628404 |
T |
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| Q |
216 |
attatcgctaaccggacgatattatggaatgatggctgttaattaaaagttaggaaatcaatacggaaatgatggttggaaa |
297 |
Q |
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| T |
43628403 |
attatcgctaaccggacgatattatggaatgatggctgttaattaaaagttcggaaatcaatacggaaatgatggttggaaa |
43628322 |
T |
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