View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10422_low_25 (Length: 260)
Name: NF10422_low_25
Description: NF10422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10422_low_25 |
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Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 26112987 - 26113210
Alignment:
| Q |
17 |
cataggaaccggatagatagagattgtgggttcgaataccctcgctaagtactaacatttctaacaactaattaattgttaaatataaaacctggtatgc |
116 |
Q |
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| T |
26112987 |
cataggaaccggagagatagagattgtgggttcgaataccctcgcgaagtactaatatttctaacaactaattagttgttaaatataaaacctggtatgc |
26113086 |
T |
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| Q |
117 |
aacaatgagtaatgagcattaaaataaaagaatggtggtactaccggaaattcgaaaagcatattcatttagtggaatttcatccttagaaacaactgag |
216 |
Q |
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||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26113087 |
aacaatgagtaatgagcattaaaataaaagaatggaggcactaccggaaattcgaaaagcatattcatttagtggaatttcatccttagaaacaactgag |
26113186 |
T |
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| Q |
217 |
aatgagtacctgcaaaagcacaac |
240 |
Q |
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||||| ||||||||||| |||||| |
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| T |
26113187 |
aatgaatacctgcaaaatcacaac |
26113210 |
T |
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