View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10422_low_26 (Length: 259)

Name: NF10422_low_26
Description: NF10422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10422_low_26
NF10422_low_26
[»] scaffold0057 (1 HSPs)
scaffold0057 (131-215)||(20583-20667)
[»] chr1 (22 HSPs)
chr1 (131-215)||(1367290-1367374)
chr1 (129-215)||(29188304-29188390)
chr1 (130-215)||(4890096-4890181)
chr1 (131-215)||(17364607-17364691)
chr1 (131-215)||(33359699-33359783)
chr1 (132-202)||(33075673-33075743)
chr1 (130-202)||(22198924-22198996)
chr1 (128-206)||(16300385-16300463)
chr1 (131-202)||(29844898-29844969)
chr1 (131-206)||(47134703-47134778)
chr1 (131-202)||(1826792-1826863)
chr1 (131-206)||(52306068-52306143)
chr1 (134-202)||(46626341-46626409)
chr1 (139-202)||(10766193-10766256)
chr1 (131-201)||(19322362-19322432)
chr1 (131-202)||(38894754-38894825)
chr1 (132-198)||(42678374-42678440)
chr1 (130-207)||(10698130-10698207)
chr1 (154-206)||(5426238-5426290)
chr1 (154-202)||(28570747-28570795)
chr1 (134-202)||(43116050-43116118)
chr1 (132-200)||(41918924-41918992)
[»] chr4 (33 HSPs)
chr4 (131-214)||(39716722-39716805)
chr4 (136-215)||(52799029-52799108)
chr4 (129-206)||(3821211-3821288)
chr4 (131-199)||(24948306-24948374)
chr4 (129-202)||(51347485-51347558)
chr4 (129-202)||(53991568-53991641)
chr4 (131-202)||(29712368-29712440)
chr4 (131-202)||(35716315-35716386)
chr4 (130-202)||(3757724-3757796)
chr4 (130-202)||(50119974-50120046)
chr4 (131-202)||(39406248-39406319)
chr4 (136-206)||(15704115-15704185)
chr4 (129-202)||(20588559-20588632)
chr4 (132-185)||(47560252-47560305)
chr4 (154-206)||(5752473-5752525)
chr4 (130-206)||(12682768-12682844)
chr4 (134-202)||(13171627-13171695)
chr4 (147-202)||(30529295-30529350)
chr4 (148-202)||(17730449-17730503)
chr4 (148-202)||(24547347-24547401)
chr4 (132-206)||(35498545-35498619)
chr4 (129-202)||(43021889-43021962)
chr4 (131-202)||(36743218-36743289)
chr4 (154-202)||(8956938-8956986)
chr4 (154-202)||(8986910-8986958)
chr4 (154-202)||(35833430-35833478)
chr4 (154-202)||(37349808-37349856)
chr4 (154-206)||(46104201-46104253)
chr4 (142-202)||(578621-578681)
chr4 (130-206)||(2116087-2116163)
chr4 (154-202)||(9888906-9888954)
chr4 (35-119)||(7205197-7205284)
chr4 (154-202)||(50033703-50033750)
[»] chr6 (12 HSPs)
chr6 (129-215)||(1218515-1218601)
chr6 (130-215)||(24443925-24444010)
chr6 (130-215)||(18323833-18323918)
chr6 (134-202)||(4897511-4897579)
chr6 (131-206)||(15045559-15045634)
chr6 (131-206)||(6969308-6969383)
chr6 (131-198)||(9737773-9737840)
chr6 (128-206)||(4107950-4108028)
chr6 (142-205)||(9981273-9981336)
chr6 (131-206)||(28573841-28573916)
chr6 (155-201)||(33328295-33328341)
chr6 (138-202)||(34316957-34317021)
[»] chr5 (16 HSPs)
chr5 (132-214)||(25698722-25698804)
chr5 (131-215)||(41689274-41689358)
chr5 (128-206)||(30140498-30140576)
chr5 (132-206)||(3088044-3088118)
chr5 (130-215)||(34715601-34715679)
chr5 (131-202)||(36886985-36887056)
chr5 (148-202)||(30754425-30754479)
chr5 (132-206)||(33709826-33709900)
chr5 (131-202)||(12592485-12592556)
chr5 (155-202)||(12422361-12422408)
chr5 (131-202)||(17643402-17643473)
chr5 (132-191)||(26602196-26602255)
chr5 (154-202)||(6305466-6305514)
chr5 (154-202)||(43138563-43138611)
chr5 (135-202)||(42977849-42977913)
chr5 (154-202)||(754461-754509)
[»] chr2 (14 HSPs)
chr2 (133-215)||(9545779-9545861)
chr2 (134-215)||(2952759-2952840)
chr2 (132-215)||(4292786-4292869)
chr2 (131-206)||(10050202-10050277)
chr2 (128-202)||(32677200-32677274)
chr2 (134-202)||(17836969-17837037)
chr2 (131-206)||(28607220-28607295)
chr2 (136-206)||(18096495-18096565)
chr2 (134-202)||(9920926-9920994)
chr2 (131-206)||(24520865-24520940)
chr2 (148-202)||(19486205-19486259)
chr2 (131-202)||(10876588-10876657)
chr2 (138-202)||(19486128-19486192)
chr2 (148-202)||(42781027-42781081)
[»] chr7 (20 HSPs)
chr7 (134-215)||(17169026-17169107)
chr7 (130-215)||(48529937-48530022)
chr7 (132-206)||(39651161-39651235)
chr7 (130-206)||(21600983-21601059)
chr7 (132-206)||(11840460-11840534)
chr7 (132-202)||(29467751-29467821)
chr7 (129-202)||(3791476-3791549)
chr7 (131-206)||(39276612-39276687)
chr7 (154-215)||(31899989-31900050)
chr7 (130-206)||(688061-688137)
chr7 (132-206)||(21670805-21670879)
chr7 (132-202)||(44804520-44804590)
chr7 (131-206)||(9143472-9143550)
chr7 (131-206)||(49146135-49146211)
chr7 (148-202)||(34872185-34872239)
chr7 (148-202)||(35157012-35157066)
chr7 (137-202)||(29684130-29684195)
chr7 (130-206)||(4848346-4848422)
chr7 (131-206)||(27737754-27737829)
chr7 (154-202)||(24684650-24684698)
[»] chr8 (24 HSPs)
chr8 (132-214)||(18378807-18378889)
chr8 (131-202)||(36776403-36776474)
chr8 (131-202)||(24053913-24053984)
chr8 (131-205)||(41152667-41152743)
chr8 (148-202)||(25346050-25346104)
chr8 (148-202)||(40587709-40587763)
chr8 (153-202)||(41972977-41973026)
chr8 (154-202)||(8760723-8760771)
chr8 (154-202)||(25836282-25836330)
chr8 (131-202)||(19243234-19243305)
chr8 (131-202)||(19316418-19316489)
chr8 (155-206)||(25620727-25620778)
chr8 (31-119)||(41429307-41429399)
chr8 (129-206)||(4466433-4466510)
chr8 (154-202)||(1942811-1942859)
chr8 (154-206)||(7389220-7389272)
chr8 (154-202)||(8162792-8162840)
chr8 (154-206)||(25616511-25616563)
chr8 (162-202)||(45435020-45435060)
chr8 (155-202)||(40616111-40616158)
chr8 (148-202)||(9472168-9472221)
chr8 (148-206)||(41534261-41534319)
chr8 (148-198)||(42245753-42245803)
chr8 (165-202)||(32844182-32844219)
[»] scaffold0069 (1 HSPs)
scaffold0069 (131-215)||(11772-11856)
[»] scaffold0009 (2 HSPs)
scaffold0009 (131-206)||(225434-225509)
scaffold0009 (134-202)||(108549-108617)
[»] scaffold0385 (1 HSPs)
scaffold0385 (136-202)||(8317-8383)
[»] chr3 (19 HSPs)
chr3 (129-202)||(11955542-11955615)
chr3 (126-206)||(8393557-8393637)
chr3 (131-202)||(22473643-22473714)
chr3 (131-206)||(22519189-22519263)
chr3 (130-202)||(29530578-29530650)
chr3 (128-202)||(8528120-8528194)
chr3 (130-206)||(4139360-4139436)
chr3 (154-206)||(18682511-18682563)
chr3 (134-202)||(26102167-26102235)
chr3 (147-202)||(19368958-19369013)
chr3 (132-206)||(19895658-19895732)
chr3 (132-214)||(33872205-33872287)
chr3 (148-202)||(35855220-35855274)
chr3 (126-206)||(26777863-26777943)
chr3 (155-202)||(28981834-28981881)
chr3 (148-206)||(55297356-55297414)
chr3 (131-196)||(11602187-11602252)
chr3 (154-206)||(53800521-53800573)
chr3 (134-206)||(9563228-9563300)
[»] scaffold0759 (1 HSPs)
scaffold0759 (130-206)||(5904-5980)
[»] scaffold0051 (1 HSPs)
scaffold0051 (131-206)||(62061-62136)
[»] scaffold0381 (1 HSPs)
scaffold0381 (154-202)||(9591-9639)


Alignment Details
Target: scaffold0057 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 20667 - 20583
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20667 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 20583  T

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Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 1367290 - 1367374
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1367290 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 1367374  T

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Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 29188390 - 29188304
Alignment:
Q  129 taatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29188390 taatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggc 29188304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 4890096 - 4890181
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4890096 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcctctattaggggcaatttggtaaattaattattggc 4890181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 17364691 - 17364607
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17364691 atctatatacttatattaaaagaaatatcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 17364607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 33359699 - 33359783
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33359699 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggc 33359783  T

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Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 33075743 - 33075673
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  33075743 tctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 33075673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 22198996 - 22198924
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  22198996 aatctatatacttatattaaaagaaatgtcccttgaatttatcattttgcccctataaggggcaatttggtaa 22198924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 16300385 - 16300463
Alignment:
Q  128 ataatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||||||| ||||| ||||||||||||||||||||    
T  16300385 ataatctatatacttatattaaaattaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaaatta 16300463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 29844969 - 29844898
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||||||| ||||||||||||||||    
T  29844969 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaa 29844898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 47134703 - 47134778
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||||||| ||| | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  47134703 atctatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 47134778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 1826792 - 1826863
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||| | |||| ||||||||||||||||    
T  1826792 atctatatacttatattaaaagtaatgtcccttgaatttaccattttggctctataaggggcaatttggtaa 1826863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 52306068 - 52306143
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||||||| ||||||||| ||| || ||||||||||||||||||||| |||||||||||| |||||||    
T  52306068 atctatatacttatataaaaagaaatatccctttaatttaccattttgcccctataaggggcaatttgataaatta 52306143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 46626409 - 46626341
Alignment:
Q  134 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||| |||  ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  46626409 tatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 46626341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 10766193 - 10766256
Alignment:
Q  139 acttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||||||||||||| || |||||||||||||||||||| |||| |||||||||||    
T  10766193 acttatattaaaagaaatgtcctatggatttaccattttgcccctataagggtcaatttggtaa 10766256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 19322432 - 19322362
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggta 201  Q
    ||||||||||| |||  |||| |||||||| |||||||||||||||||||||||| |||||||||||||||    
T  19322432 atctatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggta 19322362  T

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Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 38894754 - 38894825
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||| |||  |||  |||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  38894754 atctatatactaataagaaagtaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 38894825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 42678374 - 42678440
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttg 198  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||  |||||| ||||||||||||    
T  42678374 tctatatacttatataaaaagaaatgtcccatgaatttaccattttatccctataaggggcaatttg 42678440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 10698207 - 10698130
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaa 207  Q
    ||||||||| || | || |||||||||||||  | ||||||||||||||||||||  ||||||| |||||||||||||    
T  10698207 aatctatatgctaacataaaaagaaatgtccaataaatttaccattttgcccctagaaggggcattttggtaaattaa 10698130  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 5426238 - 5426290
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||| |||| ||||||||||||||| ||  ||||||||||||||||||||    
T  5426238 aatgtccattgattttaccattttgcccttagaaggggcaatttggtaaatta 5426290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 28570747 - 28570795
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||  ||||||||||||||||||||||| |||| |||||||||||    
T  28570747 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaa 28570795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 43116050 - 43116118
Alignment:
Q  134 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||| |||| |||| | |||||| |||||||| | ||||||||||||  ||||||||||||||||    
T  43116050 tatatactaatataaaaatacatgtccattgaatttccaattttgcccctaggaggggcaatttggtaa 43116118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 41918992 - 41918924
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggt 200  Q
    |||||||||| |||| |||| | |||||| |||||||| | ||||||||||||  || |||||||||||    
T  41918992 tctatatactaatataaaaatatatgtccattgaatttccaattttgcccctaggagtggcaatttggt 41918924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 131 - 214
Target Start/End: Complemental strand, 39716805 - 39716722
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattgg 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39716805 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattgg 39716722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 52799029 - 52799108
Alignment:
Q  136 tatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  52799029 tatacttatattaaaagaaatgtcctttaaatttaccattttacccctattaggggcaatttggtaaattaattattggc 52799108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 3821288 - 3821211
Alignment:
Q  129 taatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  3821288 taatctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaatta 3821211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 24948374 - 24948306
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttgg 199  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  24948374 atctatatacttatataaaaagaaatgtcctttgaatttaccattttgctcctataaggggcaatttgg 24948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 51347485 - 51347558
Alignment:
Q  129 taatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||| |||  ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  51347485 taatctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 51347558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 53991641 - 53991568
Alignment:
Q  129 taatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||||||||||||||||||||| |  || |||||||||||||||||||| ||||||||||||||||    
T  53991641 taatctatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaa 53991568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 29712368 - 29712440
Alignment:
Q  131 atctatatacttatattaaaa-gaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||| ||||||||||||||||    
T  29712368 atctatatacttatattaaaaagaaatgtcccttaaatttaccattttgcccctataaggggcaatttggtaa 29712440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 35716386 - 35716315
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||||||||||||||||||| |  || |||||||||||||||||||| ||||||||||||||||    
T  35716386 atctatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaa 35716315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 3757724 - 3757796
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||| |||  ||||||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  3757724 aatctatatactaataagaaaagaaatgttcattgaatttaccattttgcccctataaggggcaatttggtaa 3757796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 50120046 - 50119974
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||| |||  ||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  50120046 aatctatatactaataagaaaaggaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 50119974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 39406319 - 39406248
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||| |||||||| ||||| ||||||||||    
T  39406319 atctatatacttatataaaaagaaatgttccttgaatttaccatttagcccctataaggggtaatttggtaa 39406248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 15704115 - 15704185
Alignment:
Q  136 tatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||||||| ||||| ||||| |||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  15704115 tatacttatataaaaagtaatgttctttaaatttaccattttgcccctataaggggaaatttggtaaatta 15704185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 20588559 - 20588632
Alignment:
Q  129 taatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||| |||  ||||||||||||| ||||||| ||||||||||| |||| ||||||||||||||||    
T  20588559 taatctatatactaataagaaaagaaatgtcccttgaattcaccattttgcctctataaggggcaatttggtaa 20588632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 47560305 - 47560252
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctat 185  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  47560305 tctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctat 47560252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 5752473 - 5752525
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  5752473 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaatta 5752525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 12682844 - 12682768
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  12682844 aatctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaaatta 12682768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 13171627 - 13171695
Alignment:
Q  134 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||| |||  |||| |||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  13171627 tatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 13171695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 30529350 - 30529295
Alignment:
Q  147 taaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  30529350 taaaagaaatatcccttgaatttaccattttgcccctataaggggcaatttggtaa 30529295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 17730449 - 17730503
Alignment:
Q  148 aaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  17730449 aaaagaaatgtgctttgaatttaccattttgctcctataaggggcaatttggtaa 17730503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 24547347 - 24547401
Alignment:
Q  148 aaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  24547347 aaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaa 24547401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 35498619 - 35498545
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||| |||| |||||||||| || ||||||||| |||||||||||||| | || |||||||||||||||    
T  35498619 tctatatactaatataaaaagaaatggcccttgaatttatcattttgcccctataaaggacaatttggtaaatta 35498545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 43021889 - 43021962
Alignment:
Q  129 taatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||| |||  ||||||||||| | ||||||||||||| ||||| |||||||| ||||||||||||    
T  43021889 taatctatatactaataagaaaagaaatgttccttgaatttaccatcttgcctctattaggtgcaatttggtaa 43021962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 36743289 - 36743218
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||| |||  ||||||||||||| || |||||||||||||| | |||| ||||||||||||||||    
T  36743289 atctatatactaataagaaaagaaatgtcccttaaatttaccattttgtctctataaggggcaatttggtaa 36743218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 8956938 - 8956986
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  8956938 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 8956986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 8986910 - 8986958
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  8986910 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 8986958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 35833478 - 35833430
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||| |||| ||||||||||||||||||| ||||||||||||||||    
T  35833478 aatgtccattgattttaccattttgcccctatgaggggcaatttggtaa 35833430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 37349808 - 37349856
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  37349808 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 37349856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 46104201 - 46104253
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||| |||| |||||||||||||||| || ||||||||||||||||||||    
T  46104201 aatgtccattgattttaccattttgccccaatgaggggcaatttggtaaatta 46104253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 578681 - 578621
Alignment:
Q  142 tatattaaaagaaatgtc-ctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||||||||| | |||| ||||||||||||||||||| |||| |||||||||||    
T  578681 tatattaaaagaaatgtctcattga-tttaccattttgcccctataagggacaatttggtaa 578621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 2116087 - 2116163
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||| |||| |||   ||||||| |||| |||||||||||| || ||  ||||||||||||||||||||    
T  2116087 aatctatatactaatataaaagttaatgtccattgattttaccattttgtccttaggaggggcaatttggtaaatta 2116163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 9888954 - 9888906
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||  ||||||||||||||||||||||| |||| |||||||||||    
T  9888954 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaa 9888906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 7205197 - 7205284
Alignment:
Q  35 ctttttataacatccttttcaaatttcaat--cattaattatttctttattaatatattc-tattgatattgcatatttttctacaat 119  Q
    |||||||||| | || |||||||||||||   |||||||||||||||||  ||||||  | |||| ||||| ||||||||||||||||    
T  7205197 ctttttataagacccctttcaaatttcaagtacattaattatttctttaccaatatacccctatttatattacatatttttctacaat 7205284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 50033703 - 50033750
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||| ||||||||||||||||||| || || ||||||||||||||    
T  50033703 aatgtcctatgaatttaccattttgccctta-taagggcaatttggtaa 50033750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 1218515 - 1218601
Alignment:
Q  129 taatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1218515 taatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggc 1218601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 24443925 - 24444010
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24443925 aatctatatacttatattaaaagaaatatcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 24444010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 18323833 - 18323918
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  18323833 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaaaagcaatttggtaaattaattattggc 18323918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 4897579 - 4897511
Alignment:
Q  134 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  4897579 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 4897511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 15045634 - 15045559
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||    
T  15045634 atctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaagggtaatttggtaaatta 15045559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 6969383 - 6969308
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||||||| |||| |||   ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  6969383 atctatatactaatataaaagttaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaatta 6969308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 9737840 - 9737773
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttg 198  Q
    ||||||||||| |||  ||||||||||||| ||||||||||||||||| |||||| ||||||||||||    
T  9737840 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttg 9737773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 4107950 - 4108028
Alignment:
Q  128 ataatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||||| |||| |||   ||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||    
T  4107950 ataatctatatactaatataaaagttaatgtccattgattttaccatttttcccctatgaggggcaatttggtaaatta 4108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 9981336 - 9981273
Alignment:
Q  142 tatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatt 205  Q
    ||||| ||| ||||||| | |||||||||||||||| ||||||| |||||||||||||||||||    
T  9981336 tatataaaaggaaatgttcattgaatttaccattttacccctataaggggcaatttggtaaatt 9981273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 28573916 - 28573841
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||||||| |||| |||   ||| |||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  28573916 atctatatactgatataaaagttaatatcctttgattttaccattttgcccctaggaggggcaatttggtaaatta 28573841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 33328341 - 33328295
Alignment:
Q  155 atgtcctttgaatttaccattttgcccctattaggggcaatttggta 201  Q
    ||||||||| ||||||||||||||| ||||  |||||||||||||||    
T  33328341 atgtcctttaaatttaccattttgctcctacaaggggcaatttggta 33328295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 34316957 - 34317021
Alignment:
Q  138 tacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||| |||| |||||  |||||| |||| |||||| |||||||||||  ||||||||||||||||    
T  34316957 tactaatataaaaagtgatgtccattgattttacctttttgcccctaagaggggcaatttggtaa 34317021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 25698804 - 25698722
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattgg 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25698804 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattgg 25698722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 41689274 - 41689358
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41689274 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattatgggcaatttggtaaattaattattggc 41689358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 30140498 - 30140576
Alignment:
Q  128 ataatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  30140498 ataatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggtaatttggtaaatta 30140576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 3088118 - 3088044
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  3088118 tctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaatta 3088044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 34715601 - 34715679
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  34715601 aatctatatacttatattaaaagaaatgtcctt-------accattttgcccctattaggggcaatttggtaaattaattattggc 34715679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 36887056 - 36886985
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  36887056 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 36886985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 30754425 - 30754479
Alignment:
Q  148 aaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30754425 aaaagaaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaa 30754479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 33709900 - 33709826
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||||||||||||||||  ||||||| |||||||||||||||| ||||||| | ||||||||||||||||||    
T  33709900 tctatatacttatattaaaattaatgtcccttgaatttaccattttacccctataaagggcaatttggtaaatta 33709826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 12592556 - 12592485
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||||||| |||||||||||||  ||||||||||| ||| ||||||| ||||||||||||||||    
T  12592556 atctatatacttatataaaaagaaatgtcccatgaatttaccagtttacccctataaggggcaatttggtaa 12592485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 12422408 - 12422361
Alignment:
Q  155 atgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  12422408 atgtcctttgattttaccattttgcccctataaggggcaatttggtaa 12422361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 17643473 - 17643402
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||| |||  |||| |||||||| ||||||||| |||||||||| ||| ||||||||||||||||    
T  17643473 atctatatactaataagaaaataaatgtcccttgaatttatcattttgcccttataaggggcaatttggtaa 17643402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 26602255 - 26602196
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattagggg 191  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| ||| ||| |||||    
T  26602255 tctatatacttatataaaaagaaatgtcccttgaatttaccattttacccttataagggg 26602196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 6305514 - 6305466
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  6305514 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 6305466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 43138611 - 43138563
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  43138611 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 43138563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 42977913 - 42977849
Alignment:
Q  135 atatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||| |||  |||||||| |||   |||||||||||||||||| ||||||||||||||||    
T  42977913 atatacttatataaaagaaaatgtccattg---ttaccattttgcccctataaggggcaatttggtaa 42977849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 754509 - 754461
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||  ||||||||||||||||||||||| |||| |||||||||||    
T  754509 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaa 754461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 9545861 - 9545779
Alignment:
Q  133 ctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9545861 ctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 9545779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 2952759 - 2952840
Alignment:
Q  134 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2952759 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 2952840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 215
Target Start/End: Complemental strand, 4292869 - 4292786
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  4292869 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgctcctattaagggcaatttggtaaattaattattggc 4292786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 10050277 - 10050202
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10050277 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttgataaatta 10050202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 32677274 - 32677200
Alignment:
Q  128 ataatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  32677274 ataatctatatacttatattaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 32677200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 17836969 - 17837037
Alignment:
Q  134 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  17836969 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 17837037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 28607220 - 28607295
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| ||||||||||||||||||||    
T  28607220 atctatatacttatattaaaataaatgtccattgaatttaccattttgtccctataaggggcaatttggtaaatta 28607295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 18096495 - 18096565
Alignment:
Q  136 tatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||    
T  18096495 tatacttatataaaaagaaatgtcctttgaatttaccattttgcccctataaggggtaatttggcaaatta 18096565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 9920994 - 9920926
Alignment:
Q  134 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||| ||||||||||||||||    
T  9920994 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaa 9920926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 24520865 - 24520940
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||||||| ||||||||||||| |||||||||  |||||||| |||| ||| ||||||||||||||||    
T  24520865 atctatatacttatataaaaagaaatgtcccttgaatttataattttgcctctataaggagcaatttggtaaatta 24520940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 19486205 - 19486259
Alignment:
Q  148 aaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  19486205 aaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 19486259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 10876657 - 10876588
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  10876657 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgccccta--aggggcaatttggtaa 10876588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 19486192 - 19486128
Alignment:
Q  138 tacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||| |||  |||| ||| ||||||||| |||||||||||||| ||||||||||||||||    
T  19486192 tacttatataaaagaaaatatccattgaatttatcattttgcccctataaggggcaatttggtaa 19486128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 42781027 - 42781081
Alignment:
Q  148 aaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||| ||||||||| ||||||| |||| | ||||||||||||||||    
T  42781027 aaaagaaatgtcccttgaatttatcattttgtccctgtaaggggcaatttggtaa 42781081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 17169026 - 17169107
Alignment:
Q  134 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17169026 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggc 17169107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 48530022 - 48529937
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  48530022 aatctatatacttatattaaaagaaatgtcctttgaaattaccattttgcccctattgggggcaatttggtaaattaattattggc 48529937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 39651235 - 39651161
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39651235 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 39651161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 21601059 - 21600983
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  21601059 aatctatatacttctattaaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 21600983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 11840534 - 11840460
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  11840534 tctatatacttctattaaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 11840460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 29467751 - 29467821
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  29467751 tctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 29467821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 3791476 - 3791549
Alignment:
Q  129 taatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||    
T  3791476 taatctatatacttatattaaaagaaatgtcctatggatttaccattttgcccctataaggggcaatttggtaa 3791549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 39276612 - 39276687
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||    
T  39276612 atctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaagggtaatttggtaaatta 39276687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 31900050 - 31899989
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  31900050 aatgtcctttgaatttacaattttgcccctattaggggcaatttggtagattaattattggc 31899989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 688061 - 688137
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||| |||| |||   |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  688061 aatctatatactaatataaaagttaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaaatta 688137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 21670879 - 21670805
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | ||  ||||||||||||||    
T  21670879 tctatatacttatattaaaagaaatgtcccttgaatttactattttgcccctataaaggataatttggtaaatta 21670805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 44804520 - 44804590
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||| |||  ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  44804520 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaa 44804590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 9143472 - 9143550
Alignment:
Q  131 atctatatacttatattaaaagaaatg---tcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||||||| |||| |||||||||    ||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  9143472 atctatatactaatataaaaagaaataatatcccttgaatttaccattttgcccctataaggggcaatttggtaaatta 9143550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 49146211 - 49146135
Alignment:
Q  131 atctatatacttatattaaaaga-aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||||||| |||| |||||  ||||||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  49146211 atctatatactaatataaaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaaatta 49146135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 34872185 - 34872239
Alignment:
Q  148 aaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  34872185 aaaagaaatgtcctttgaacttaccattttgtccctataaggggcaatttggtaa 34872239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 35157066 - 35157012
Alignment:
Q  148 aaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||||||||||    
T  35157066 aaaagaaatgtcacttgaatttaccattttgcccctataaggggcaatttggtaa 35157012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 29684195 - 29684130
Alignment:
Q  137 atacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||| |||| ||||||||||| | |||||||||||||||| ||||||| ||||||||||||||||    
T  29684195 atactaatataaaaagaaatgtgccttgaatttaccattttacccctataaggggcaatttggtaa 29684130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 4848346 - 4848422
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| ||||| ||||||||||||||    
T  4848346 aatctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggtaatttggtaaatta 4848422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 27737829 - 27737754
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||| ||| |||||||| |||| |||||||||||||||| ||||||| | ||  ||||||||||||||    
T  27737829 atctatatacttctataaaaagaaaagtcccttgaatttaccattttacccctataaaggataatttggtaaatta 27737754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 24684698 - 24684650
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||  |||||||||||||||||| |||| ||||||||||||||||    
T  24684698 aatgtcccatgaatttaccattttgcctctataaggggcaatttggtaa 24684650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 18378889 - 18378807
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattgg 214  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  18378889 tctatatacttatattaaaagaaatgtcctttgaatttatcattttgcctctattaggggcaatttggtaaattaattattgg 18378807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 36776403 - 36776474
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  36776403 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 36776474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 24053913 - 24053984
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  24053913 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 24053984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 41152667 - 41152743
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggc--aatttggtaaatt 205  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||| |||||| |||| |  |||||||||||||    
T  41152667 atctatatacttatataaaaagaaatgtcccttgaatttaccattttgtccctatcagggtcctaatttggtaaatt 41152743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 25346050 - 25346104
Alignment:
Q  148 aaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  25346050 aaaagaaatgtccattgaatttaccattttgcctctataaggggcaatttggtaa 25346104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 40587763 - 40587709
Alignment:
Q  148 aaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||| |||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  40587763 aaaataaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 40587709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 41972977 - 41973026
Alignment:
Q  153 aaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  41972977 aaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 41973026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 8760723 - 8760771
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  8760723 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 8760771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 25836330 - 25836282
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  25836330 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 25836282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 19243234 - 19243305
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||| |||| |||||  |||||  |||| |||||| |||||||||| ||||||||||||||||||    
T  19243234 atctatatactaatataaaaagtgatgtctgttgattttacctttttgcccctcttaggggcaatttggtaa 19243305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 19316418 - 19316489
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||| |||| |||||  |||||  |||| |||||| |||||||||| ||||||||||||||||||    
T  19316418 atctatatactaatataaaaagtgatgtctgttgattttacctttttgcccctcttaggggcaatttggtaa 19316489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 25620778 - 25620727
Alignment:
Q  155 atgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||| |||| ||||| ||||||||||||| ||||||||||||||||||||    
T  25620778 atgtccattgattttactattttgcccctatgaggggcaatttggtaaatta 25620727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 41429307 - 41429399
Alignment:
Q  31 atctctttttataacatccttttcaaatttcaat---cattaattatttctttattaatatat-tctattgatattgcatatttttctacaat 119  Q
    |||||||||||||| |||| |||||||||| |||   |||||||||||||||||  | |||||  ||||| || |||||||||||||||||||    
T  41429307 atctctttttataagatccctttcaaattttaatgtacattaattatttctttaccattatatccctatttatgttgcatatttttctacaat 41429399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 4466510 - 4466433
Alignment:
Q  129 taatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||||||||| |||| |||   ||||||| |||| ||||||||||| ||| ||  ||||||||||||||||||||    
T  4466510 taatctatatactaatataaaagttaatgtccattgattttaccattttacccttaggaggggcaatttggtaaatta 4466433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 1942811 - 1942859
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||  |||||||||||||||||| |||| ||||||||||||||||    
T  1942811 aatgtcccatgaatttaccattttgcctctataaggggcaatttggtaa 1942859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 7389220 - 7389272
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||| |||| |||||||||||||||| |  ||||||||||||||||||||    
T  7389220 aatgtccattgattttaccattttgccccaaggaggggcaatttggtaaatta 7389272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 8162840 - 8162792
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||  ||||||||||||||||||||||| |||| |||||||||||    
T  8162840 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaa 8162792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 25616563 - 25616511
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||| |||| ||||||||||||||| ||  ||||||||||||||||||||    
T  25616563 aatgtccattgattttaccattttgcccttaagaggggcaatttggtaaatta 25616511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 45435020 - 45435060
Alignment:
Q  162 ttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  45435020 ttgaatttaccattttgcccttataaggggcaatttggtaa 45435060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 40616158 - 40616111
Alignment:
Q  155 atgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||| |||||||||||||||||| ||||| || |||||||||||||    
T  40616158 atgtcccttgaatttaccattttgctcctataagaggcaatttggtaa 40616111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 9472168 - 9472221
Alignment:
Q  148 aaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||| ||||| ||||||||||||| ||| || ||||||||||||||    
T  9472168 aaaagaaatgtcccttgaaattaccattttgcctcta-taagggcaatttggtaa 9472221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 41534319 - 41534261
Alignment:
Q  148 aaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||| ||||||||  ||||||||||||||||| ||||| |||| ||||||| |||||||    
T  41534319 aaaataaatgtcccatgaatttaccattttgctcctataagggacaatttgataaatta 41534261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 42245803 - 42245753
Alignment:
Q  148 aaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttg 198  Q
    ||||||||||||  ||||||| |||||||||||||||| ||||| ||||||    
T  42245803 aaaagaaatgtcacttgaattcaccattttgcccctataaggggtaatttg 42245753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 32844182 - 32844219
Alignment:
Q  165 aatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||||||||| || ||||||||||||||||    
T  32844182 aatttaccattttgccccgataaggggcaatttggtaa 32844219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 11772 - 11856
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggc 215  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||||||    
T  11772 atctatatacttatattaaaagaaatgtcatttgaatttaccattttgcctttattaggggcaatttggtaaatttattattggc 11856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 225434 - 225509
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  225434 atctatatacttatattaaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaatta 225509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 108549 - 108617
Alignment:
Q  134 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||| |||  ||||||||||||| ||||||||||||||||| ||| || ||||| ||||||||||    
T  108549 tatatactaataagaaaagaaatgtcccttgaatttaccattttgtccccataaggggtaatttggtaa 108617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 8383 - 8317
Alignment:
Q  136 tatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  8383 tatacttatattaaaagaaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 8317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 11955615 - 11955542
Alignment:
Q  129 taatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||| |||||||||||||||||||||||||||  || |||||||||||||||||||| ||||||||||||||||    
T  11955615 taatatatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaa 11955542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 8393557 - 8393637
Alignment:
Q  126 aaataatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||| ||||||||||| |||| |||   |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8393557 aaattatctatatactaatataaaagttaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaaatta 8393637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 22473643 - 22473714
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||||||||||||||||||| |  || |||||||||||||||||||| ||||||||||||||||    
T  22473643 atctatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaa 22473714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 22519189 - 22519263
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||||||    
T  22519189 atctatatacttctattaaaagaa-tgtccattgaatttaccattttgcccctataaggggcaatttagtaaatta 22519263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 29530650 - 29530578
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||| |||  ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  29530650 aatctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaa 29530578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 8528194 - 8528120
Alignment:
Q  128 ataatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||||| |||  ||||||||||||| |||||||||||||| || |||||| ||||||||||||||||    
T  8528194 ataatctatatactaataagaaaagaaatgtcccttgaatttaccattctgtccctataaggggcaatttggtaa 8528120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 4139436 - 4139360
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||| |||| |||   ||||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  4139436 aatctatatactaatataaaagttaatgtccattgattttaccattttgtccctattaggggcaatttggtaaatta 4139360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 18682511 - 18682563
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  18682511 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaatta 18682563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 26102235 - 26102167
Alignment:
Q  134 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||| |||  |||||||||||||||||||||||||||||||||||||| || || ||||||||||    
T  26102235 tatatactaataagaaaagaaatgtcctttgaatttaccattttgcccctataagaggtaatttggtaa 26102167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 19369013 - 19368958
Alignment:
Q  147 taaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||    
T  19369013 taaaagaaatgtcccttgattttaccattttgcccctataaggggcaatttggtaa 19368958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 19895732 - 19895658
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||||||  ||  |||||||| |||||||||||||||||||| ||| | ||||||||||||||||||    
T  19895732 tctatatacttatatagaagaaaatgtccattgaatttaccattttgcccttataaagggcaatttggtaaatta 19895658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 33872205 - 33872287
Alignment:
Q  132 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattgg 214  Q
    |||||||||| |||| |||||||||||||  |||||||||||||||| |||||  |||| || |||||||||||||| |||||    
T  33872205 tctatatactaatataaaaagaaatgtccgatgaatttaccattttgtccctagaagggccattttggtaaattaataattgg 33872287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 35855220 - 35855274
Alignment:
Q  148 aaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    ||||||||||||| || ||||||||||||||||||||| ||||||||||||||||    
T  35855220 aaaagaaatgtcccttaaatttaccattttgcccctataaggggcaatttggtaa 35855274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 26777943 - 26777863
Alignment:
Q  126 aaataatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||| ||||||||||| |||| |||   || |||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  26777943 aaatcatctatatactaatataaaagttaacgtccattgattttaccattttgcccctatgaggggcaatttggtaaatta 26777863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 28981881 - 28981834
Alignment:
Q  155 atgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  28981881 atgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 28981834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 55297414 - 55297356
Alignment:
Q  148 aaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||||||||| | |||||||||||||| ||||||| | ||| ||||||||||||||    
T  55297414 aaaagaaatgtccctcgaatttaccattttacccctataaagggtaatttggtaaatta 55297356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 11602252 - 11602187
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatt 196  Q
    ||||||||||| |||| ||||   |||||| |||| ||||||||||||||||||| ||||||||||    
T  11602252 atctatatactaatataaaaatccatgtccgttgattttaccattttgcccctataaggggcaatt 11602187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 53800521 - 53800573
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||| |||| ||||||||||||||| ||  ||||||||||||||||||||    
T  53800521 aatgtccattgattttaccattttgcccttaggaggggcaatttggtaaatta 53800573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 9563228 - 9563300
Alignment:
Q  134 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||| |||| |||||| |||||  || ||||||||||||||||| ||  | ||||| ||||||||||||    
T  9563228 tatatactaatataaaaagagatgtctattaaatttaccattttgcccatagaaagggcattttggtaaatta 9563300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0759 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 5980 - 5904
Alignment:
Q  130 aatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    |||||||||||| |||| |||   |||||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  5980 aatctatatactaatataaaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaaatta 5904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 62061 - 62136
Alignment:
Q  131 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 206  Q
    ||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  62061 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaaatta 62136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 9591 - 9639
Alignment:
Q  154 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaa 202  Q
    |||||||  ||||||||||||||||||||||| |||| |||||||||||    
T  9591 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaa 9639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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