View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10422_low_27 (Length: 248)
Name: NF10422_low_27
Description: NF10422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10422_low_27 |
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Alignment Details
Target: chr6 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 1796612 - 1796389
Alignment:
| Q |
19 |
ctgacaaactaaacatgttaatttccttatttttt-attcaaggtcttcataattaatgtatataatattgattgagtcctttcaaaaattgattgagtt |
117 |
Q |
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| T |
1796612 |
ctgacaaactaaacatgttaatttccttatttttttattcaaggtcttcataattaatgtatataatattgattgagtcctttcaaaaattgattgagtt |
1796513 |
T |
|
| Q |
118 |
cattcaattcaaccttcttccagccggctaatattcctcaaatcgagccggccctttgattttaaattttgatattcataaataattgttgaaatatctc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1796512 |
cattcaattcaaccttcttccagccggctaatattcctcaaatcgagccggccctttgattttaaattttgatattcataaataattgttgaaatatctc |
1796413 |
T |
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| Q |
218 |
tatttgatttttgtcttcttctct |
241 |
Q |
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|||||||||||||||||||||||| |
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| T |
1796412 |
tatttgatttttgtcttcttctct |
1796389 |
T |
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