View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10424_low_4 (Length: 400)
Name: NF10424_low_4
Description: NF10424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10424_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 35327658 - 35328046
Alignment:
| Q |
1 |
gattaaaccggaaaaaatgaatcagtgattaatacgatacagacatcacaaaaatcgtgaatgaagcgcatggtaaaatattctgcatcgctcatttcat |
100 |
Q |
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| T |
35327658 |
gattaaaccggaaaaaatgaatcggtgattaatacgatacagacatcacaaaaatcgtgaatgaagcgcatggtaaaatattctgcatcgctcatttcat |
35327757 |
T |
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| Q |
101 |
aagccatacagatatttttcatgttctgcatggttaaaccatgaaccaaatctttttaatagttaaacctagttcttataaacccatat----atattga |
196 |
Q |
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| T |
35327758 |
aagccatacagatatttttcatgttctgcatggttaa-ccatgaaccaaatctttttgatagttaaatctagttcttataaacccatatatatatattga |
35327856 |
T |
|
| Q |
197 |
aatgaaaagatagaaagaatcaagagactgagtgttaaactggaaacttaacgaagaaaatgaagaatttctcctcaagggcttttcactttgcagataa |
296 |
Q |
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| T |
35327857 |
aatgaaaagatagaaagaatcaagaaactgagtgttaaactggaaacttaacgaagaaaatgaagaatttctcctcaagggcttttcactttgcagataa |
35327956 |
T |
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| Q |
297 |
tttcttatttcaccaccaactatccaatgtacagaatgaccttccacaaccgcacataccctatttatctatccaaccaaatcccctttg |
386 |
Q |
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| T |
35327957 |
tttcttatttcaccacctactatccaatgtacagaatgaccttccacaaccgcacataccctatttatctatctaaccaaatcccctttg |
35328046 |
T |
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