View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10426_low_14 (Length: 236)
Name: NF10426_low_14
Description: NF10426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10426_low_14 |
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Alignment Details
Target: chr6 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 10309614 - 10309824
Alignment:
| Q |
10 |
aatagatagattaggttcacgaatataaaatcataaatttttatcctaaccgaaccattttaatgtttgtcnnnnnnnttcatatttgatccgaactaaa |
109 |
Q |
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| T |
10309614 |
aatagatagattaggttcacgaatataaaatcataaatttttatcctaaccgaaccattttaatgtttgtcaaaaaaattcatatttgatccgaactaaa |
10309713 |
T |
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| Q |
110 |
actaaaaagttgaagttaattgttctattcacccctcaagtatgtttctcaaccctgaaaaataaaccgattgggagttacatcctggtaaagaaacaaa |
209 |
Q |
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||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10309714 |
actaaaaagttgaagttaactgttctatctacccctcaagtatgtttctcaaccctgaaaaataaaccgattgggagttacatcctggtaaagaaacaac |
10309813 |
T |
|
| Q |
210 |
gatcagataat |
220 |
Q |
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||||||||||| |
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| T |
10309814 |
gatcagataat |
10309824 |
T |
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