View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10427_high_13 (Length: 265)
Name: NF10427_high_13
Description: NF10427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10427_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 257
Target Start/End: Complemental strand, 33453434 - 33453201
Alignment:
| Q |
18 |
aattcatggtaatttgttggccatattggagttggattattcctacttttcattttgttctctatgacttagttgatctttggaatttaaatgagttgtt |
117 |
Q |
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| T |
33453434 |
aattcatggtaatttgttggccatattggagttggattattcctacttttcattttgttctctatgacttagttggtctttggaatttaaatgagttgtt |
33453335 |
T |
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| Q |
118 |
aagttacctctcacagtgttatcaaattatgtcatggataatgaatgtgcccctttcacagattatataaagttggttcaactgcaaatttcatctcaca |
217 |
Q |
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| T |
33453334 |
aagttacttctcacagtgttatcaaattatgtcatggataatgaatg------tttcacagattatataaagttggttcaacttcaaatttcatctcaca |
33453241 |
T |
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| Q |
218 |
tgttattttgaggatcttctaaagaacaatgctctctgct |
257 |
Q |
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| T |
33453240 |
tgttattttgaggatcttctaaagaacaatgctctatgct |
33453201 |
T |
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