View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10428_low_3 (Length: 535)
Name: NF10428_low_3
Description: NF10428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10428_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 455; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 18 - 524
Target Start/End: Original strand, 30419241 - 30419752
Alignment:
| Q |
18 |
ctctgaacatagtaacagatgcaaccattaacacaatcgcggagagtgaaacagnnnnnnntgttctcatgacagcaattcaaaacagagataaagatgg |
117 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |
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| T |
30419241 |
ctctgaacatagtaacagatgcaaccattaacacaatcgcggagagtgaaacaaaaaaaaatgttctcatgacagcaattcaaaacagagataaagttgg |
30419340 |
T |
|
| Q |
118 |
tgtaaaatggacaaacaatccaaactactttcattatcatggagaccgatagtgttacaattttgtggaagctaggaaactagggtcaagaacacaaaaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30419341 |
tgtaaaatggacaaacaatccaaactactttcattatcatggagactgatagtgttacaattttgtggaagctaggaaactagggtcaagaacacaaaaa |
30419440 |
T |
|
| Q |
218 |
ca-----tactacaccatgatatgtcttgcctgccaataataaatatatagaccttacacatgaattgaaatcaaacagaaagctctgttcgagagatca |
312 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30419441 |
cagaaagtactacaccatgatatgtcttgcctgccaataataaatatataggccttacacatgaattgaaatcaaacagaaagctctgttcgagagatca |
30419540 |
T |
|
| Q |
313 |
gaattccatcggtgtctgcataaagccattccccatcaccgatccttgtcccagcaatagttatgggaacatgcttttctcccatacctttcttattggc |
412 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30419541 |
gaattccatcggtgtctgcataaagccattccccatcaccgatccttgtcccagcaatagttatgggaacatgcttttctcccatacctttcttattggc |
30419640 |
T |
|
| Q |
413 |
tttcatgggatgagaaccaagagctctcaccccaatatcacaaccattgatctcatccacatctcttatacatccattcacaatgatacctgcccatcca |
512 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30419641 |
tttcatgggatgagaaccaagagctctcaccccaatatcacaaccattgatctcatccacatctcttatacatccattcacaatgatacctgcccatcca |
30419740 |
T |
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| Q |
513 |
ttgttctgtgct |
524 |
Q |
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|||||||||||| |
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| T |
30419741 |
ttgttctgtgct |
30419752 |
T |
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