View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10428_low_4 (Length: 477)

Name: NF10428_low_4
Description: NF10428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10428_low_4
NF10428_low_4
[»] chr6 (50 HSPs)
chr6 (16-477)||(26800636-26801097)
chr6 (196-477)||(22424662-22424946)
chr6 (196-477)||(17758072-17758354)
chr6 (196-477)||(3808542-3808828)
chr6 (144-477)||(2972721-2973058)
chr6 (196-477)||(17763039-17763321)
chr6 (196-477)||(5043676-5043958)
chr6 (196-477)||(21588980-21589260)
chr6 (196-477)||(26829959-26830242)
chr6 (334-477)||(21593713-21593855)
chr6 (367-471)||(5413403-5413507)
chr6 (365-477)||(26954294-26954405)
chr6 (276-477)||(603003-603207)
chr6 (367-477)||(9183041-9183150)
chr6 (382-471)||(5406224-5406313)
chr6 (382-471)||(5410549-5410638)
chr6 (358-471)||(31404675-31404788)
chr6 (349-477)||(28137400-28137527)
chr6 (367-450)||(5409078-5409162)
chr6 (358-471)||(2171532-2171644)
chr6 (367-471)||(30834545-30834649)
chr6 (387-471)||(33160381-33160465)
chr6 (358-468)||(412158-412270)
chr6 (358-468)||(3072759-3072871)
chr6 (367-473)||(33211195-33211300)
chr6 (358-471)||(16452329-16452442)
chr6 (382-474)||(3038927-3039019)
chr6 (250-448)||(9572667-9572868)
chr6 (358-439)||(6097451-6097533)
chr6 (367-440)||(16569107-16569180)
chr6 (358-471)||(16578518-16578632)
chr6 (358-471)||(16616748-16616862)
chr6 (358-471)||(16653166-16653280)
chr6 (49-143)||(27692650-27692746)
chr6 (384-477)||(4045472-4045566)
chr6 (358-471)||(16554923-16555037)
chr6 (358-471)||(16631479-16631593)
chr6 (358-471)||(27647915-27648028)
chr6 (358-434)||(25421396-25421474)
chr6 (72-143)||(27533398-27533471)
chr6 (347-450)||(25073643-25073748)
chr6 (358-434)||(6027337-6027415)
chr6 (49-100)||(27707466-27707517)
chr6 (367-434)||(13154005-13154074)
chr6 (72-143)||(27594798-27594871)
chr6 (72-143)||(27726350-27726423)
chr6 (367-434)||(33342114-33342183)
chr6 (367-434)||(34164948-34165017)
chr6 (358-423)||(34167183-34167248)
chr6 (358-402)||(4641090-4641134)
[»] chr7 (71 HSPs)
chr7 (143-477)||(8359103-8359436)
chr7 (144-477)||(2390331-2390667)
chr7 (144-477)||(3259044-3259372)
chr7 (144-477)||(29608786-29609113)
chr7 (196-477)||(34310552-34310835)
chr7 (200-474)||(4508548-4508822)
chr7 (196-474)||(4510386-4510664)
chr7 (196-474)||(4512228-4512506)
chr7 (144-477)||(22328183-22328510)
chr7 (196-477)||(32357897-32358173)
chr7 (142-477)||(48599121-48599453)
chr7 (196-477)||(6359792-6360071)
chr7 (347-477)||(22270022-22270151)
chr7 (196-477)||(2360819-2361091)
chr7 (358-477)||(23555089-23555208)
chr7 (367-477)||(6432020-6432129)
chr7 (382-471)||(19502233-19502322)
chr7 (358-471)||(35853969-35854082)
chr7 (358-477)||(30024733-30024851)
chr7 (367-477)||(27347866-27347975)
chr7 (358-471)||(29991108-29991221)
chr7 (347-463)||(31518965-31519081)
chr7 (382-477)||(23565085-23565180)
chr7 (358-468)||(39731426-39731537)
chr7 (382-477)||(48491628-48491723)
chr7 (367-477)||(2759207-2759316)
chr7 (367-477)||(25615902-25616012)
chr7 (367-477)||(48489480-48489589)
chr7 (382-471)||(8153397-8153486)
chr7 (382-471)||(25766984-25767074)
chr7 (396-477)||(47673981-47674062)
chr7 (367-471)||(14069843-14069946)
chr7 (367-471)||(14379871-14379974)
chr7 (349-477)||(31105385-31105512)
chr7 (358-477)||(47676137-47676255)
chr7 (367-473)||(31732979-31733084)
chr7 (396-477)||(4586210-4586291)
chr7 (365-477)||(36146416-36146526)
chr7 (367-471)||(41317444-41317547)
chr7 (382-477)||(496007-496102)
chr7 (382-477)||(1113706-1113801)
chr7 (347-477)||(4253518-4253648)
chr7 (382-477)||(18126693-18126788)
chr7 (367-470)||(41649021-41649123)
chr7 (382-468)||(43504178-43504266)
chr7 (367-477)||(43864293-43864402)
chr7 (358-471)||(20343951-20344064)
chr7 (396-477)||(26417365-26417446)
chr7 (367-477)||(18396367-18396477)
chr7 (382-449)||(24525526-24525594)
chr7 (347-471)||(48408857-48408984)
chr7 (367-467)||(3904626-3904726)
chr7 (347-477)||(23344024-23344151)
chr7 (358-471)||(24789896-24790009)
chr7 (367-439)||(1560675-1560749)
chr7 (382-471)||(4178829-4178917)
chr7 (351-477)||(36574510-36574635)
chr7 (358-434)||(18388760-18388838)
chr7 (358-434)||(18392196-18392274)
chr7 (358-434)||(32060322-32060400)
chr7 (367-477)||(38671232-38671341)
chr7 (367-419)||(26639432-26639484)
chr7 (373-450)||(5116679-5116758)
chr7 (358-434)||(6592340-6592418)
chr7 (358-434)||(6594558-6594636)
chr7 (365-431)||(12097875-12097940)
chr7 (424-474)||(31518847-31518896)
chr7 (367-431)||(30814530-30814594)
chr7 (351-450)||(5513661-5513760)
chr7 (196-229)||(22270241-22270274)
chr7 (196-229)||(30814690-30814723)
[»] chr4 (86 HSPs)
chr4 (146-477)||(41964464-41964794)
chr4 (144-477)||(379429-379763)
chr4 (144-477)||(12073441-12073773)
chr4 (196-477)||(2209762-2210048)
chr4 (196-477)||(50673686-50673966)
chr4 (144-477)||(35662490-35662816)
chr4 (199-477)||(40632494-40632772)
chr4 (144-477)||(8665457-8665787)
chr4 (162-477)||(26699251-26699562)
chr4 (290-477)||(46703549-46703737)
chr4 (144-477)||(8648188-8648526)
chr4 (196-474)||(41639478-41639754)
chr4 (167-477)||(33989893-33990199)
chr4 (276-477)||(6656005-6656205)
chr4 (180-474)||(12119591-12119893)
chr4 (142-477)||(26364285-26364618)
chr4 (196-477)||(50262534-50262820)
chr4 (142-355)||(55085233-55085439)
chr4 (276-477)||(27416884-27417084)
chr4 (146-322)||(46703752-46703929)
chr4 (358-477)||(56178637-56178756)
chr4 (336-477)||(54883069-54883210)
chr4 (290-477)||(33089927-33090116)
chr4 (367-477)||(9927468-9927577)
chr4 (347-477)||(31474200-31474329)
chr4 (367-477)||(48893648-48893757)
chr4 (356-471)||(29999804-29999920)
chr4 (382-477)||(48143092-48143187)
chr4 (358-468)||(13992293-13992402)
chr4 (367-477)||(26175646-26175755)
chr4 (367-477)||(37740674-37740783)
chr4 (367-471)||(5370092-5370196)
chr4 (347-450)||(6542169-6542272)
chr4 (358-468)||(31495316-31495428)
chr4 (350-477)||(37229714-37229841)
chr4 (367-477)||(5429728-5429837)
chr4 (367-477)||(36463399-36463508)
chr4 (367-477)||(46147401-46147510)
chr4 (346-477)||(22882740-22882870)
chr4 (346-477)||(22934404-22934534)
chr4 (384-477)||(34570440-34570533)
chr4 (367-471)||(12743935-12744038)
chr4 (367-471)||(12745324-12745427)
chr4 (347-471)||(52095352-52095475)
chr4 (367-477)||(47038421-47038529)
chr4 (347-477)||(4588008-4588137)
chr4 (367-477)||(36994573-36994682)
chr4 (144-268)||(54881561-54881679)
chr4 (367-471)||(12739560-12739663)
chr4 (382-477)||(54199930-54200025)
chr4 (396-477)||(3913497-3913578)
chr4 (358-471)||(8393448-8393562)
chr4 (358-471)||(8395657-8395771)
chr4 (398-471)||(12744087-12744160)
chr4 (400-477)||(24969161-24969238)
chr4 (367-471)||(45687192-45687295)
chr4 (398-468)||(12745476-12745546)
chr4 (174-321)||(41961603-41961746)
chr4 (396-471)||(12747794-12747869)
chr4 (382-449)||(13009468-13009536)
chr4 (367-477)||(29254543-29254652)
chr4 (367-477)||(52467364-52467473)
chr4 (351-450)||(21703829-21703929)
chr4 (382-445)||(5207866-5207930)
chr4 (382-477)||(5871869-5871964)
chr4 (347-450)||(51337139-51337242)
chr4 (369-477)||(34112866-34112973)
chr4 (338-477)||(21688298-21688437)
chr4 (330-402)||(38811162-38811235)
chr4 (382-434)||(7124992-7125046)
chr4 (196-301)||(21688470-21688572)
chr4 (367-434)||(5136155-5136224)
chr4 (367-434)||(5138380-5138449)
chr4 (347-473)||(44967818-44967944)
chr4 (240-310)||(6719771-6719842)
chr4 (382-434)||(7122773-7122827)
chr4 (247-322)||(32091645-32091719)
chr4 (167-226)||(33090164-33090223)
chr4 (142-199)||(27416789-27416844)
chr4 (424-477)||(44570432-44570485)
chr4 (351-445)||(35369440-35369534)
chr4 (165-218)||(38811016-38811069)
chr4 (399-477)||(6677518-6677597)
chr4 (433-477)||(32091527-32091570)
chr4 (433-477)||(34788851-34788894)
chr4 (347-473)||(37754949-37755076)
[»] chr1 (76 HSPs)
chr1 (144-448)||(28242382-28242688)
chr1 (165-477)||(47115220-47115533)
chr1 (144-477)||(37168346-37168678)
chr1 (144-477)||(31925498-31925826)
chr1 (196-477)||(37032907-37033192)
chr1 (142-477)||(7482009-7482350)
chr1 (196-477)||(47255179-47255459)
chr1 (196-477)||(29136296-29136577)
chr1 (196-449)||(37876604-37876858)
chr1 (196-477)||(11348747-11349030)
chr1 (196-449)||(13548842-13549092)
chr1 (196-477)||(13546935-13547208)
chr1 (196-477)||(42297815-42298094)
chr1 (175-477)||(34603625-34603914)
chr1 (172-477)||(6808501-6808799)
chr1 (338-477)||(193660-193799)
chr1 (142-297)||(194750-194901)
chr1 (282-477)||(19754544-19754737)
chr1 (358-477)||(8550787-8550906)
chr1 (358-477)||(3189379-3189498)
chr1 (358-477)||(3198196-3198315)
chr1 (358-477)||(3207035-3207154)
chr1 (276-477)||(19752735-19752932)
chr1 (367-477)||(28220236-28220345)
chr1 (382-475)||(46064969-46065062)
chr1 (343-477)||(22079365-22079501)
chr1 (365-477)||(49918399-49918510)
chr1 (367-477)||(3156914-3157023)
chr1 (365-471)||(20762727-20762833)
chr1 (367-477)||(28223431-28223540)
chr1 (367-477)||(28265564-28265673)
chr1 (167-477)||(12318336-12318642)
chr1 (358-471)||(13316352-13316465)
chr1 (382-474)||(1833574-1833666)
chr1 (351-476)||(5459956-5460081)
chr1 (382-477)||(44455209-44455304)
chr1 (367-477)||(834177-834286)
chr1 (367-477)||(13659346-13659455)
chr1 (347-477)||(15820356-15820485)
chr1 (367-477)||(31659287-31659396)
chr1 (358-471)||(51765450-51765565)
chr1 (144-230)||(31929345-31929431)
chr1 (367-471)||(45644364-45644467)
chr1 (365-477)||(37503565-37503673)
chr1 (367-477)||(4552647-4552756)
chr1 (365-471)||(50167183-50167288)
chr1 (348-477)||(23555257-23555384)
chr1 (358-471)||(50169211-50169323)
chr1 (397-477)||(16455670-16455750)
chr1 (367-477)||(13137986-13138095)
chr1 (330-422)||(2926613-2926706)
chr1 (365-477)||(41360963-41361074)
chr1 (348-477)||(37282682-37282811)
chr1 (177-477)||(9109239-9109539)
chr1 (367-471)||(37559877-37559981)
chr1 (358-477)||(196908-197027)
chr1 (365-477)||(40122204-40122317)
chr1 (358-468)||(40282435-40282545)
chr1 (375-467)||(13938195-13938288)
chr1 (367-449)||(3847131-3847213)
chr1 (396-477)||(10925272-10925356)
chr1 (358-439)||(9987287-9987369)
chr1 (358-439)||(20622237-20622319)
chr1 (358-471)||(9036471-9036584)
chr1 (398-477)||(30476486-30476565)
chr1 (347-477)||(927966-928095)
chr1 (358-434)||(44203722-44203800)
chr1 (349-477)||(2262965-2263094)
chr1 (382-439)||(36683766-36683824)
chr1 (167-229)||(41136107-41136169)
chr1 (367-439)||(21054044-21054117)
chr1 (197-230)||(6398927-6398960)
chr1 (385-423)||(8871089-8871127)
chr1 (167-227)||(22079598-22079658)
chr1 (433-477)||(25652135-25652178)
chr1 (348-450)||(44650153-44650256)
[»] chr8 (63 HSPs)
chr8 (144-477)||(40328828-40329158)
chr8 (144-471)||(3772247-3772571)
chr8 (196-477)||(11384034-11384314)
chr8 (196-477)||(18655449-18655732)
chr8 (238-477)||(4283573-4283811)
chr8 (198-477)||(42434831-42435110)
chr8 (276-475)||(10930116-10930316)
chr8 (276-477)||(40221794-40221994)
chr8 (358-477)||(42498243-42498362)
chr8 (347-477)||(1292454-1292582)
chr8 (367-477)||(15212835-15212944)
chr8 (367-477)||(33352199-33352308)
chr8 (367-477)||(43036472-43036581)
chr8 (382-471)||(19945383-19945473)
chr8 (358-467)||(34256507-34256616)
chr8 (358-471)||(44303910-44304023)
chr8 (390-477)||(30143389-30143476)
chr8 (367-468)||(2627792-2627895)
chr8 (367-477)||(3303680-3303789)
chr8 (367-477)||(27811327-27811436)
chr8 (358-467)||(17982712-17982821)
chr8 (358-471)||(31218312-31218425)
chr8 (358-467)||(34254331-34254440)
chr8 (369-477)||(4162546-4162652)
chr8 (367-471)||(5689326-5689429)
chr8 (367-477)||(7597663-7597774)
chr8 (347-477)||(10015130-10015257)
chr8 (367-477)||(12702644-12702753)
chr8 (358-471)||(1746219-1746331)
chr8 (369-477)||(4731707-4731814)
chr8 (358-471)||(3439558-3439671)
chr8 (382-477)||(18141869-18141964)
chr8 (347-477)||(8153807-8153936)
chr8 (367-477)||(40321129-40321238)
chr8 (365-474)||(1345379-1345487)
chr8 (367-477)||(29796329-29796441)
chr8 (396-477)||(30291656-30291737)
chr8 (376-476)||(32902191-32902292)
chr8 (396-477)||(44353842-44353923)
chr8 (365-477)||(19491707-19491818)
chr8 (144-229)||(40222019-40222102)
chr8 (367-477)||(18106091-18106197)
chr8 (367-477)||(41366625-41366733)
chr8 (353-466)||(3073870-3073981)
chr8 (367-447)||(4733784-4733864)
chr8 (367-439)||(4743224-4743296)
chr8 (351-477)||(11711993-11712120)
chr8 (358-471)||(25690009-25690122)
chr8 (367-477)||(6599021-6599130)
chr8 (367-477)||(6674474-6674583)
chr8 (239-386)||(10240263-10240411)
chr8 (278-361)||(2999723-2999806)
chr8 (367-471)||(9765800-9765902)
chr8 (167-208)||(15691105-15691146)
chr8 (367-477)||(8965701-8965810)
chr8 (233-477)||(11137074-11137320)
chr8 (367-423)||(38863961-38864017)
chr8 (367-434)||(15290614-15290683)
chr8 (367-434)||(15470983-15471052)
chr8 (367-434)||(42575333-42575402)
chr8 (396-477)||(1822341-1822423)
chr8 (396-477)||(1856786-1856868)
chr8 (407-448)||(10929865-10929907)
[»] chr3 (79 HSPs)
chr3 (144-477)||(46860523-46860857)
chr3 (144-471)||(41819310-41819636)
chr3 (143-477)||(36018901-36019233)
chr3 (196-477)||(49199303-49199589)
chr3 (196-477)||(43401635-43401921)
chr3 (196-477)||(43403578-43403864)
chr3 (196-474)||(6095438-6095715)
chr3 (196-449)||(55301808-55302064)
chr3 (196-477)||(30236174-30236456)
chr3 (199-477)||(54593753-54594033)
chr3 (144-477)||(46173406-46173738)
chr3 (334-474)||(4570004-4570144)
chr3 (358-477)||(7762314-7762433)
chr3 (358-477)||(34491261-34491379)
chr3 (276-467)||(40913352-40913546)
chr3 (347-477)||(32891153-32891282)
chr3 (196-477)||(47304300-47304583)
chr3 (382-477)||(7764513-7764608)
chr3 (358-471)||(19683889-19684002)
chr3 (358-471)||(45095218-45095331)
chr3 (358-477)||(9581331-9581450)
chr3 (382-477)||(29810917-29811012)
chr3 (367-477)||(29813112-29813221)
chr3 (367-477)||(40735432-40735541)
chr3 (367-477)||(51398863-51398972)
chr3 (382-471)||(37408513-37408602)
chr3 (358-468)||(801148-801260)
chr3 (367-477)||(16499078-16499187)
chr3 (367-477)||(44331594-44331703)
chr3 (347-477)||(53921493-53921622)
chr3 (358-471)||(5258144-5258257)
chr3 (358-471)||(23197939-23198052)
chr3 (358-471)||(23200138-23200251)
chr3 (365-477)||(44700487-44700597)
chr3 (382-477)||(760896-760991)
chr3 (367-477)||(22835012-22835121)
chr3 (367-477)||(40734547-40734656)
chr3 (358-471)||(5260323-5260436)
chr3 (144-477)||(20937705-20938032)
chr3 (382-468)||(7780028-7780114)
chr3 (367-471)||(29196396-29196499)
chr3 (184-319)||(5433774-5433905)
chr3 (196-322)||(31340064-31340186)
chr3 (382-477)||(39153385-39153480)
chr3 (382-468)||(9636150-9636236)
chr3 (367-477)||(31314494-31314603)
chr3 (382-477)||(5236481-5236575)
chr3 (367-477)||(29682408-29682517)
chr3 (367-477)||(32744446-32744555)
chr3 (347-477)||(33191881-33192009)
chr3 (346-477)||(35138694-35138825)
chr3 (367-467)||(4055773-4055874)
chr3 (358-471)||(6716554-6716667)
chr3 (358-471)||(54635179-54635292)
chr3 (367-477)||(9666476-9666585)
chr3 (367-439)||(45283071-45283145)
chr3 (172-318)||(5270580-5270723)
chr3 (367-467)||(4075480-4075581)
chr3 (367-423)||(27305720-27305775)
chr3 (358-434)||(3617540-3617618)
chr3 (377-420)||(5433901-5433944)
chr3 (367-434)||(25637517-25637586)
chr3 (424-477)||(31340268-31340320)
chr3 (330-419)||(39127656-39127745)
chr3 (367-477)||(23391919-23392028)
chr3 (367-434)||(4598532-4598601)
chr3 (367-434)||(10056309-10056378)
chr3 (367-434)||(10058531-10058600)
chr3 (367-434)||(10060753-10060822)
chr3 (367-434)||(10062975-10063044)
chr3 (367-434)||(10065197-10065266)
chr3 (367-434)||(10211485-10211554)
chr3 (347-423)||(2075065-2075140)
chr3 (397-467)||(51352150-51352219)
chr3 (382-434)||(10209265-10209319)
chr3 (367-434)||(4600753-4600822)
chr3 (172-228)||(1683768-1683824)
chr3 (382-449)||(23410353-23410421)
chr3 (437-477)||(24635306-24635345)
[»] chr5 (64 HSPs)
chr5 (146-477)||(27637403-27637732)
chr5 (199-477)||(213514-213795)
chr5 (276-477)||(40147310-40147510)
chr5 (167-477)||(316811-317121)
chr5 (196-477)||(5058094-5058375)
chr5 (144-477)||(16640737-16641056)
chr5 (347-477)||(13239800-13239930)
chr5 (347-477)||(28278365-28278494)
chr5 (196-449)||(27015599-27015848)
chr5 (347-477)||(16452129-16452258)
chr5 (358-467)||(37439200-37439309)
chr5 (382-471)||(25412815-25412904)
chr5 (347-477)||(9049332-9049461)
chr5 (367-477)||(13488252-13488361)
chr5 (367-477)||(42428440-42428549)
chr5 (334-424)||(4160701-4160791)
chr5 (358-471)||(13343116-13343228)
chr5 (358-471)||(36074043-36074155)
chr5 (191-307)||(40751195-40751308)
chr5 (358-477)||(538074-538192)
chr5 (358-468)||(9789224-9789335)
chr5 (358-468)||(16409532-16409643)
chr5 (358-468)||(26177939-26178050)
chr5 (358-471)||(30182643-30182756)
chr5 (367-471)||(32636879-32636982)
chr5 (365-477)||(42426243-42426354)
chr5 (358-468)||(18441648-18441759)
chr5 (367-477)||(533818-533927)
chr5 (367-477)||(30682932-30683043)
chr5 (396-477)||(39468587-39468668)
chr5 (365-477)||(8565954-8566065)
chr5 (172-477)||(10054633-10054935)
chr5 (369-477)||(28750667-28750774)
chr5 (196-307)||(40763200-40763308)
chr5 (347-477)||(13695680-13695810)
chr5 (382-477)||(33831729-33831824)
chr5 (386-477)||(42309963-42310054)
chr5 (358-471)||(10593312-10593426)
chr5 (358-439)||(26170848-26170930)
chr5 (396-477)||(38747054-38747135)
chr5 (358-468)||(29722582-29722692)
chr5 (358-468)||(29751160-29751270)
chr5 (370-477)||(33906042-33906150)
chr5 (358-471)||(22536290-22536403)
chr5 (367-477)||(31183021-31183129)
chr5 (347-473)||(3075648-3075773)
chr5 (347-451)||(30793210-30793314)
chr5 (358-468)||(29720422-29720532)
chr5 (424-477)||(42926916-42926968)
chr5 (358-434)||(25078211-25078289)
chr5 (358-434)||(25136180-25136258)
chr5 (358-434)||(40380181-40380259)
chr5 (358-434)||(40382392-40382470)
chr5 (347-449)||(42926967-42927069)
chr5 (377-477)||(3325962-3326063)
chr5 (367-423)||(19806466-19806521)
chr5 (367-434)||(16544499-16544568)
chr5 (367-434)||(16546721-16546790)
chr5 (167-227)||(4160885-4160945)
chr5 (174-218)||(8445995-8446039)
chr5 (175-226)||(30793418-30793469)
chr5 (290-477)||(10700581-10700767)
chr5 (167-225)||(33905837-33905895)
chr5 (433-477)||(14689503-14689546)
[»] scaffold0176 (1 HSPs)
scaffold0176 (200-477)||(17845-18122)
[»] chr2 (50 HSPs)
chr2 (144-477)||(7451167-7451500)
chr2 (143-432)||(17450671-17450957)
chr2 (187-477)||(42287940-42288229)
chr2 (196-477)||(45726978-45727257)
chr2 (144-477)||(33648220-33648548)
chr2 (196-477)||(35446726-35447003)
chr2 (196-477)||(1631571-1631851)
chr2 (255-477)||(24398106-24398332)
chr2 (367-477)||(2334427-2334537)
chr2 (358-468)||(36988076-36988186)
chr2 (367-477)||(6595015-6595125)
chr2 (367-477)||(17057379-17057488)
chr2 (367-477)||(17085362-17085471)
chr2 (352-477)||(17490143-17490267)
chr2 (165-474)||(30217858-30218161)
chr2 (367-477)||(36773611-36773720)
chr2 (358-471)||(4503133-4503245)
chr2 (358-471)||(5723256-5723369)
chr2 (358-471)||(45099810-45099922)
chr2 (367-477)||(723754-723863)
chr2 (396-477)||(7815311-7815392)
chr2 (365-477)||(33162458-33162569)
chr2 (382-471)||(4484354-4484444)
chr2 (367-477)||(36318019-36318128)
chr2 (367-477)||(38312289-38312398)
chr2 (368-477)||(26353233-26353341)
chr2 (367-471)||(11067360-11067463)
chr2 (367-471)||(29867924-29868027)
chr2 (369-421)||(28672036-28672088)
chr2 (358-468)||(32289621-32289732)
chr2 (382-477)||(42362401-42362496)
chr2 (382-467)||(30833404-30833490)
chr2 (358-471)||(36205665-36205777)
chr2 (367-477)||(14633835-14633945)
chr2 (367-477)||(34139780-34139890)
chr2 (347-477)||(42019859-42019992)
chr2 (367-477)||(11151601-11151710)
chr2 (358-468)||(6266749-6266859)
chr2 (367-471)||(13656041-13656146)
chr2 (382-477)||(11049602-11049698)
chr2 (167-225)||(24398377-24398435)
chr2 (172-221)||(42261310-42261359)
chr2 (358-477)||(11690550-11690668)
chr2 (392-477)||(13121818-13121901)
chr2 (358-434)||(12647386-12647464)
chr2 (367-431)||(39284930-39284994)
chr2 (366-477)||(7597020-7597130)
chr2 (396-440)||(14202450-14202495)
chr2 (382-423)||(42412121-42412161)
chr2 (433-477)||(4561137-4561180)
[»] scaffold0236 (1 HSPs)
scaffold0236 (144-469)||(10546-10869)
[»] scaffold0466 (1 HSPs)
scaffold0466 (196-477)||(7376-7654)
[»] scaffold0927 (1 HSPs)
scaffold0927 (144-248)||(3377-3482)
[»] scaffold0286 (1 HSPs)
scaffold0286 (358-471)||(11612-11725)
[»] scaffold0219 (1 HSPs)
scaffold0219 (355-477)||(27439-27562)
[»] scaffold0016 (1 HSPs)
scaffold0016 (358-471)||(114657-114770)
[»] scaffold0002 (2 HSPs)
scaffold0002 (358-471)||(434588-434701)
scaffold0002 (172-221)||(490145-490194)
[»] scaffold0066 (1 HSPs)
scaffold0066 (367-477)||(20425-20534)
[»] scaffold0006 (1 HSPs)
scaffold0006 (367-477)||(149107-149216)
[»] scaffold1519 (1 HSPs)
scaffold1519 (358-471)||(971-1083)
[»] scaffold0491 (2 HSPs)
scaffold0491 (358-468)||(8735-8846)
scaffold0491 (358-468)||(11161-11272)
[»] scaffold0674 (1 HSPs)
scaffold0674 (367-434)||(3735-3804)
[»] scaffold0565 (1 HSPs)
scaffold0565 (358-434)||(2604-2682)
[»] scaffold0349 (1 HSPs)
scaffold0349 (72-143)||(4929-5002)
[»] scaffold0197 (1 HSPs)
scaffold0197 (253-322)||(1291-1360)
[»] scaffold0137 (1 HSPs)
scaffold0137 (367-434)||(6363-6432)
[»] scaffold0477 (1 HSPs)
scaffold0477 (358-402)||(6981-7025)
[»] scaffold0014 (1 HSPs)
scaffold0014 (425-477)||(80351-80402)


Alignment Details
Target: chr6 (Bit Score: 429; Significance: 0; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 16 - 477
Target Start/End: Complemental strand, 26801097 - 26800636
Alignment:
Q  16 ccatccatctcagctatggatttaaatcggatggactagattggtgctgttatttctgggaatccatttccatatcaactccatgcaaacaactaaaata 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26801097 ccatccatctcagctatggatttaaatcggatggactagattggtgctgttatttctgggaatccatttccatatcaactccatgcaaacaactaaaata 26800998  T
Q  116 tggactaagaattatcccacatcatgtatgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26800997 tggactaagaattatcccacatcatgtatgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggc 26800898  T
Q  216 aaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  26800897 aaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagcaaaaccacaatctaaccaaaagataa 26800798  T
Q  316 acaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaa 415  Q
    |||||||       |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26800797 acaagataaaaagagtagagaaaagataacaacaccaagaaatgttcatccagttcggtccaacaatgacctactctggaggagagattgatctctccaa 26800698  T
Q  416 tccactataatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26800697 tccactataatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 26800636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 22424662 - 22424946
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaa-- 293  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| |||||||||||||||||| | |||||| ||||||||| ||||||      
T  22424662 gtggagcaagtatcaatggtaaccaataaccaaatgtaaataaccacaaacaacaacaacaatctagatctaatatagaaaccaagtgcattgaaaaaaa 22424761  T
Q  294 ccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctg 393  Q
    ||||||||||||| |||||||||||||||       |||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  22424762 ccacaatctaacctaaggataaacaagataaagagagtagagaaaagataacaacaccaagaaatgttcacccagtacggtccaacaatgacctactctg 22424861  T
Q  394 gaggagagattgatctctccaatccactataatgagttcttacaaagagatac-aaaattagttacaagaaattagcttcaacaa 477  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||    
T  22424862 aaggagagattgatctctccaatccactataatgagttcttacaaagagatacaaaaatgggttacaagaaattagcttaaacaa 22424946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 196 - 477
Target Start/End: Complemental strand, 17758354 - 17758072
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  17758354 gtggagcaagtatcaatggcaaccaataaccaaatgtaaataaccgcaagcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaacc 17758255  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngt-agagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 394  Q
    |||||||||||||||||||||||||||       || | || ||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||| |    
T  17758254 acaatctaaccaaaggataaacaagataaagagcgtaaaaggaaagataacaacaccaagaaatgttcacctagttcggtccaaacttgaactactctag 17758155  T
Q  395 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  17758154 aggggagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaa 17758072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 3808542 - 3808828
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||||| |||||||||||| ||||||| ||||||    
T  3808542 gtggagcaagtatcaatggcaaccaataatcaaatgtaaataaccaaaagcaatagcaacaatctagatctaatctagaaaacaaatgcatagcaaaacc 3808641  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaa---agataacaacaccaaga-aatgttcatctagttcggtccaacaatgacctactc 391  Q
    | |||||||||||||||||||||||||       |||||||||   ||| |||||| |||||| | |||||| ||||||||||||||  |||||||||||    
T  3808642 ataatctaaccaaaggataaacaagataaagagagtagagaaaaatagacaacaaccccaagagattgttcacctagttcggtccaatcatgacctactc 3808741  T
Q  392 tggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  3808742 tggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaatgggttacaagaaattagtttcaacaa 3808828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 144 - 477
Target Start/End: Original strand, 2972721 - 2973058
Alignment:
Q  144 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 242  Q
    ||||||||||| || ||||||||| |||| |||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||| |||||    
T  2972721 tgttgtgaatttggtctcaaattccaaacatcacatcaatgaaatttaaattcgttgagcaagtatcaatggcaaccaataatcaaatgtaaataaccac 2972820  T
Q  243 aagcaataacaacaatctagatctagtctagaaaacaagtgcatag-aaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagag----aa 337  Q
    || ||| ||||||||| |||| |||||||| |||  |||||||||| ||||||||||||||||||||| ||||||||||||       | ||||    ||    
T  2972821 aaacaacaacaacaatatagacctagtctataaactaagtgcatagaaaaaaccacaatctaaccaaatgataaacaagatatagagag-agagtaaaaa 2972919  T
Q  338 aagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac 436  Q
    || ||||||||||||||||||||||| ||||||||||| |||  ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  2972920 aaaataacaacaccaagaaatgttcacctagttcggtcgaac-ttgacctactcttgaggagagattgatctctccaatccactatcaatgagttcttac 2973018  T
Q  437 aaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||| ||||  ||||||||||||||||||||||||    
T  2973019 aaagagatac-aaatgggttacaagaaattagcttcaacaa 2973058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 196 - 477
Target Start/End: Complemental strand, 17763321 - 17763039
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||||| |||||||||||||||||||||| |||||| ||||||||||||| |||||     
T  17763321 gtggagcaagtatcaatgacaaccaataaccaaatgtaaataatcacaaacaataacaacaatctagatctaatctagataacaagtgcatagcaaaact 17763222  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngtaga-gaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 394  Q
    |||||||||||||||||| ||||||||       ||| | ||||||||||||||||||||||||||||| ||||||||||||||   ||| |||||||||    
T  17763221 acaatctaaccaaaggatgaacaagataaagagagtaaaagaaaagataacaacaccaagaaatgttcacctagttcggtccaaacttgatctactctgg 17763122  T
Q  395 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||| |||||||||||||| ||||||||||| |||| |||||| |||| |||||||||||||||||||||||||    
T  17763121 aggagagattgatcactccaatccactatcaatgagttcttccaaaaagatac-aaatgagttacaagaaattagcttcaacaa 17763039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 196 - 477
Target Start/End: Complemental strand, 5043958 - 5043676
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaaa 293  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||| ||||||| ||||||||| ||  || ||| |||| ||  ||||||||||| ||||    
T  5043958 gtggagcacgtatcaatgacaaccaataaccaaatgtaaataacctcaagcaacaacaacaatatatagacctattctataat-caagtgcatagcaaaa 5043860  T
Q  294 ccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctg 393  Q
    |||||||| ||||||   |||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||    
T  5043859 ccacaatccaaccaagaaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaacaatgacctactatg 5043760  T
Q  394 gaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  5043759 gaggagagattgatctctccaatctactatcaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaacaa 5043676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 196 - 477
Target Start/End: Complemental strand, 21589260 - 21588980
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    ||||||||||||||||||| |||||| |||||||      | ||||||||||||||||||||| |||| |||||||| ||| ||||||||||| ||||||    
T  21589260 gtggagcaagtatcaatggaaaccaacaaccaaaaaatgttaaccacaagcaataacaacaatatagacctagtctataaaccaagtgcatagcaaaacc 21589161  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgga 395  Q
    |||||| ||| || | |||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||  ||||||||||||||    
T  21589160 acaatccaactaaggaataaacaagataaggaaagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaac-ttgacctactctgga 21589062  T
Q  396 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  21589061 ggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaa 21588980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 26829959 - 26830242
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || | |||||||| ||| ||||||||||| ||||||    
T  26829959 gtggagcaagtatcaatggaaaccaataaccaaatgtaaataaccacaagcaataacaacaatataaacctagtctataaaccaagtgcatagcaaaacc 26830058  T
Q  296 acaatctaaccaaagga-taaacaagatnnnnnnng--tagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactct 392  Q
    |||||| ||   ||||| ||||||||||       |  || |||||||||||||||||||||||||||||| | ||||| ||| |||  ||||||||| |    
T  26830059 acaatccaaagcaaggaataaacaagataaagagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcagtcaaact-tgacctacttt 26830157  T
Q  393 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||   |||||||||||||||||||||||    
T  26830158 ggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatggattacaagaaattagcttcaacaa 26830242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 334 - 477
Target Start/End: Complemental strand, 21593855 - 21593713
Alignment:
Q  334 agaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc 432  Q
    |||||||||||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21593855 agaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatgagttc 21593757  T
Q  433 ttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||    
T  21593756 ttacaaagagatac-aaatgggttacaagaaattagcttcaacaa 21593713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 5413403 - 5413507
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||    
T  5413403 agttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaat 5413501  T
Q  466 tagctt 471  Q
    ||||||    
T  5413502 tagctt 5413507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 365 - 477
Target Start/End: Original strand, 26954294 - 26954405
Alignment:
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 463  Q
    |||||||||||||||  ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| | || |||||||||||    
T  26954294 ctagttcggtccaact-tgacctactttgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-agatgagttacaagaa 26954391  T
Q  464 attagcttcaacaa 477  Q
    ||||||||||||||    
T  26954392 attagcttcaacaa 26954405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 276 - 477
Target Start/End: Original strand, 603003 - 603207
Alignment:
Q  276 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa---gataacaacaccaagaaat-gttcatctagttc 371  Q
    ||||||||||||| |||||||||||| |||||| | |||||||||||       ||||||||||   || ||||||| ||||| || ||| | | |||||    
T  603003 aacaagtgcatagtaaaaccacaatccaaccaaggcataaacaagataaagagagtagagaaaaatagacaacaacatcaagagattgttgacccagttc 603102  T
Q  372 ggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagct 470  Q
    ||||||||  ||||||| ||| | |||||||||||| ||||||||||||||| || |||||||||||||||||||| ||||  |||||||||||||||||    
T  603103 ggtccaact-tgacctaatcttggggagagattgatttctccaatccactatcaacgagttcttacaaagagatac-aaatgggttacaagaaattagct 603200  T
Q  471 tcaacaa 477  Q
    |||||||    
T  603201 tcaacaa 603207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 9183041 - 9183150
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  |||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  9183041 agttcggtccaact-tgacataatctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 9183138  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  9183139 tagcttcaacaa 9183150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 382 - 471
Target Start/End: Original strand, 5406224 - 5406313
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 471  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||    
T  5406224 tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaattagctt 5406313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 382 - 471
Target Start/End: Original strand, 5410549 - 5410638
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 471  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||    
T  5410549 tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaattagctt 5410638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 31404675 - 31404788
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  31404675 tgttcacccagttcggtccaaacttggcctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 31404773  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  31404774 acaagaaattagctt 31404788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 349 - 477
Target Start/End: Original strand, 28137400 - 28137527
Alignment:
Q  349 accaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagataca 447  Q
    |||||||||||||||   | |||||||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||     
T  28137400 accaagaaatgttcacacaattcggtccaact-tgacctactctgggggagagattgatctctccaatccactatcaatgagttcttacaaagaaatac- 28137497  T
Q  448 aaattagttacaagaaattagcttcaacaa 477  Q
    ||||  |||||||||||||||||| |||||    
T  28137498 aaatgggttacaagaaattagcttaaacaa 28137527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 367 - 450
Target Start/End: Original strand, 5409078 - 5409162
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaa 450  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5409078 agttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa 5409162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 2171532 - 2171644
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    |||    
T  2171532 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaagagatacaaa--gggtt 2171629  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  2171630 acaagaaattagctt 2171644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 30834545 - 30834649
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   ||||||||||||    
T  30834545 agttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaa-gggttacaagaaat 30834643  T
Q  466 tagctt 471  Q
    ||||||    
T  30834644 tagctt 30834649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 387 - 471
Target Start/End: Original strand, 33160381 - 33160465
Alignment:
Q  387 tactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 471  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||||||||||||||    
T  33160381 tactctggaggagagattgatctctccaatccaccatcaatgagttcttacaaagagatacaaaa-gagttacaagaaattagctt 33160465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 358 - 468
Target Start/End: Complemental strand, 412270 - 412158
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||| ||||||||||||||  |||    
T  412270 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctctaatccactatcaatgagttcttacaaaagagatacaaaaagagt 412171  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  412170 tacaagaaattag 412158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 358 - 468
Target Start/End: Original strand, 3072759 - 3072871
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||  |||    
T  3072759 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaattcactatcaatgagttcttacaaaagagatacaaaaagagt 3072858  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  3072859 tacaagaaattag 3072871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 473
Target Start/End: Original strand, 33211195 - 33211300
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||| || ||||||||||    
T  33211195 agttcggtccaact-tgacctactctgggggagagattgatctctccaatccattataaatgagttcttacaaagagatac-aaatgagctacaagaaat 33211292  T
Q  466 tagcttca 473  Q
    || |||||    
T  33211293 taacttca 33211300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 16452329 - 16452442
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||  |||   |||    
T  16452329 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttccaaagagatatgaaa-gggtt 16452427  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  16452428 acaagaaattagctt 16452442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 382 - 474
Target Start/End: Original strand, 3038927 - 3039019
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccacta-taatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 474  Q
    ||||||| ||||| ||||||||| ||||||||||||||||| ||| |||||||||||||||||||| ||||  |||||||||||||||||||||    
T  3038927 tgacctaatctgggggagagattaatctctccaatccactattaaagagttcttacaaagagatac-aaatgggttacaagaaattagcttcaa 3039019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 448
Target Start/End: Complemental strand, 9572868 - 9572667
Alignment:
Q  250 aacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaaca 349  Q
    ||||| |||||||||||| |||||||| |||||||||||||| ||||||||| || ||||| ||| | |||||         ||||||||||||||||||    
T  9572868 aacaataatctagatctaatctagaaaccaagtgcatagaaataccacaatcgaatcaaagaatagataagataaagacacgagagaaaagataacaaca 9572769  T
Q  350 ccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctt-acaaagagatac 446  Q
     ||||||||  || | | |||||| | |||  ||||||||||||  || |||||||||||||| ||||||||||| |||| |||||| |||||||| |||    
T  9572768 tcaagaaatattttacccagttcgtttcaatgatgacctactctaaagtagagattgatctctgcaatccactatcaatgggttcttaacaaagagttac 9572669  T
Q  447 aa 448  Q
    ||    
T  9572668 aa 9572667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 6097451 - 6097533
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 439  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  6097451 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaa 6097533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 367 - 440
Target Start/End: Complemental strand, 16569180 - 16569107
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaag 440  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16569180 agttcggtccaact-tgacctaatctggaggagagattgatctctccaatccactatcaatgagttcttacaaag 16569107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 16578518 - 16578632
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 454  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  16578518 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 16578615  T
Q  455 ttacaagaaattagctt 471  Q
    |||||||||||||||||    
T  16578616 ttacaagaaattagctt 16578632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 16616862 - 16616748
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 454  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  16616862 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 16616765  T
Q  455 ttacaagaaattagctt 471  Q
    |||||||||||||||||    
T  16616764 ttacaagaaattagctt 16616748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 16653280 - 16653166
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 454  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  16653280 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 16653183  T
Q  455 ttacaagaaattagctt 471  Q
    |||||||||||||||||    
T  16653182 ttacaagaaattagctt 16653166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 49 - 143
Target Start/End: Original strand, 27692650 - 27692746
Alignment:
Q  49 gactagattggtgctgttatttctgggaatccatttccatatcaactccatgcaaacaactaaaatatggact--aagaattatcccacatcatgta 143  Q
    ||||| |||||||| |||| | |||||||||||||||||||||||||||||| |||  ||||| | || ||||  ||||||||||||||||||||||    
T  27692650 gactaaattggtgcagttactactgggaatccatttccatatcaactccatgaaaaacactaataaatagactaaaagaattatcccacatcatgta 27692746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 477
Target Start/End: Complemental strand, 4045566 - 4045472
Alignment:
Q  384 acctactctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| ||| | ||| |||||||||||||||||||||| ||||||||  ||||||||||||| ||||| | |||||||||||||||||||||||    
T  4045566 acctactttggggtagaaattgatctctccaatccactatcaatgagttatttacaaagagatataaaatga-ttacaagaaattagcttcaacaa 4045472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 16555037 - 16554923
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 454  Q
    |||||| | ||||||||||||   ||||||||| |||||||||| |||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  16555037 tgttcacccagttcggtccaaacttgacctactttggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 16554940  T
Q  455 ttacaagaaattagctt 471  Q
    |||||||||||||||||    
T  16554939 ttacaagaaattagctt 16554923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 16631593 - 16631479
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 454  Q
    |||||| | ||||||||||||   ||||||||| |||||||||| |||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  16631593 tgttcacccagttcggtccaaacttgacctactttggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 16631496  T
Q  455 ttacaagaaattagctt 471  Q
    |||||||||||||||||    
T  16631495 ttacaagaaattagctt 16631479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 27648028 - 27647915
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||| |||||||||||||||| |||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  27648028 tgttcacccagttcggtccaaacttgatctactctggaggagagtttgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 27647931  T
Q  456 tacaagaaattagctt 471  Q
    ||||||||||||||||    
T  27647930 tacaagaaattagctt 27647915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 25421474 - 25421396
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  25421474 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 25421396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 27533398 - 27533471
Alignment:
Q  72 tgggaatccatttccatatcaactccatgcaaacaactaaaatatggact--aagaattatcccacatcatgta 143  Q
    ||||||||||||||||||||||||||||| |||  ||||| | || ||||  ||||||||||||||||||||||    
T  27533398 tgggaatccatttccatatcaactccatgaaaaacactaataaatagactaaaagaattatcccacatcatgta 27533471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 450
Target Start/End: Complemental strand, 25073748 - 25073643
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagat 444  Q
    ||||||||||||||| | ||||||  ||| |||||| ||||| | || | ||||||||||| |||| |||||||||| ||||||||| ||||| ||||||    
T  25073748 acaccaagaaatgtttacctagtttagtctaacaataacctaatttgaatgagagattgatttctctaatccactatcaatgagttctttacatagagat 25073649  T
Q  445 acaaaa 450  Q
    ||||||    
T  25073648 acaaaa 25073643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 6027415 - 6027337
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    |||||| | ||||||||||||   |||| |||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  6027415 tgttcacccagttcggtccaaacttgacatactctggaggagagattgtactctccaatccactatcaaatgagttctt 6027337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 27707466 - 27707517
Alignment:
Q  49 gactagattggtgctgttatttctgggaatccatttccatatcaactccatg 100  Q
    ||||| |||||||| |||| | ||||||||||||||||||||||||||||||    
T  27707466 gactaaattggtgcagttactactgggaatccatttccatatcaactccatg 27707517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 13154074 - 13154005
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  13154074 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 13154005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 27594798 - 27594871
Alignment:
Q  72 tgggaatccatttccatatcaactccatgcaaacaactaaaatatggact--aagaattatcccacatcatgta 143  Q
    |||||||||||||||||||||||| |||| |||  ||||| | || ||||  ||||||||||||||||||||||    
T  27594798 tgggaatccatttccatatcaactacatgaaaaacactaataaatagactaaaagaattatcccacatcatgta 27594871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 27726350 - 27726423
Alignment:
Q  72 tgggaatccatttccatatcaactccatgcaaacaactaaaatatggact--aagaattatcccacatcatgta 143  Q
    ||||||||||||||||||||||||||||| |||  ||||| | || | ||  ||||||||||||||||||||||    
T  27726350 tgggaatccatttccatatcaactccatgaaaaacactaataaatagtctaaaagaattatcccacatcatgta 27726423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Original strand, 33342114 - 33342183
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  33342114 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 33342183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 34165017 - 34164948
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  34165017 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 34164948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 423
Target Start/End: Complemental strand, 34167248 - 34167183
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat 423  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||    
T  34167248 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactat 34167183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 402
Target Start/End: Complemental strand, 4641134 - 4641090
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagaga 402  Q
    |||| ||| |||||||||||| ||||||||||||| |||||||||    
T  4641134 tgtttatccagttcggtccaataatgacctactctagaggagaga 4641090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 143 - 477
Target Start/End: Original strand, 8359103 - 8359436
Alignment:
Q  143 atgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattacca 241  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||   ||    
T  8359103 atgttgtgaattcggtctcaaattccaaacctcacaccaatgaaatttagattcgtggagcaagtatcaatggcaaccaacaatcaaaagtaaat---ca 8359199  T
Q  242 caagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaaga 341  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||    
T  8359200 caagcaacaacaacaatctagatctaatctagaaaacaagtgcatagcaaaaccacaatctaaccaaaggataaacaagataatgagagtagagaaaaga 8359299  T
Q  342 taacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaag 440  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8359300 taacaacaccaagaaatgttcacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaag 8359399  T
Q  441 agatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||  ||||||||||||||| || |||||    
T  8359400 agatacaaaatgggttacaagaaattagtttaaacaa 8359436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 144 - 477
Target Start/End: Complemental strand, 2390667 - 2390331
Alignment:
Q  144 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 243  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||    
T  2390667 tgttgtgaattcggattcaaatccaaacctcacatcaatgaaatttagattagtggagcaagtatcaatgacaaccaataaccaaatgtaaataaccaca 2390568  T
Q  244 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaa---ag 340  Q
    | |||||||||||||||||||||| |||||||||||| || |||| |||||||||||| ||| ||||||||||||||||       |||||||||   |     
T  2390567 atcaataacaacaatctagatctaatctagaaaacaaatgtatagcaaaaccacaatccaacaaaaggataaacaagataaagagagtagagaaaaataa 2390468  T
Q  341 ataacaacaccaaga-aatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactata-atgagttcttacaa 438  Q
    | ||||||||||||| | | |||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  2390467 acaacaacaccaagagattattcacctagttcggtccaac-ttgacctactctggaggagagattgatctctccaatccactatatatgagttattacaa 2390369  T
Q  439 agagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||| ||||  ||||||||||||||||||||||||    
T  2390368 agagatac-aaatgggttacaagaaattagcttcaacaa 2390331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 144 - 477
Target Start/End: Complemental strand, 3259372 - 3259044
Alignment:
Q  144 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 243  Q
    |||||||||||||| ||||||||| ||    || |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||    
T  3259372 tgttgtgaattcggtctcaaattccaa----acctcaatgaactttagattcggggagcaagtatcaatgacaaccaataaccaaatgtaaataaccaca 3259277  T
Q  244 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata 343  Q
    |||||||||||||||||||||||| ||||||||||| | |||||| |||||||||||| |||||| | |||||||||||       ||| ||||||||||    
T  3259276 agcaataacaacaatctagatctaatctagaaaacacgggcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaagaaaagata 3259177  T
Q  344 acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagag 442  Q
    ||||||||| |||||||||| | |||||||| ||||  |||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  3259176 acaacaccaggaaatgttcacccagttcggttcaac-ttgacctactctggaggagagattgatctctccaatccactatcaatgggtttttacaaagag 3259078  T
Q  443 atacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||| |||| |||||||| |||||||||| |||||    
T  3259077 atac-aaatgagttacaataaattagcttaaacaa 3259044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 144 - 477
Target Start/End: Complemental strand, 29609113 - 29608786
Alignment:
Q  144 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 242  Q
    |||| |||||||| | |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||       |||||||| |||||    
T  29609113 tgttatgaattcgaattcaaattccaaacctcacattaatgaaatttagattcgtggagcaagtatcaatgacaaccaa-------atgtaaataaccac 29609021  T
Q  243 aagcaataacaacaatctagatctagtctagaaaacaagtgcata-gaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaaga 341  Q
    |||||| |||||||||||||||||| | |||||| ||||||||||  |||||||||||||||| |||||||||||||||||       ||||||||||||    
T  29609020 aagcaacaacaacaatctagatctaatatagaaaccaagtgcatatcaaaaaccacaatctaagcaaaggataaacaagataaagagagtagagaaaaga 29608921  T
Q  342 taacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaag 440  Q
    ||||||||||||||||| ||||   |||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  29608920 taacaacaccaagaaatattcactcagttcggtccaac-ttgacctactctggaggagtgattgatatctccaatccactatcaatgagttcttacaaag 29608822  T
Q  441 agatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||| |||| |||||||||||||||||||||||||    
T  29608821 agatac-aaatgagttacaagaaattagcttcaacaa 29608786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 34310552 - 34310835
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaatt-accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaac 294  Q
    |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||| |||||||| ||| ||||||||||| |||||    
T  34310552 gtggagcaagtatcaatgacaaccaataaccaaatgtaaatagaccacaagcaataacaacaatatagacctagtctataaaccaagtgcatagcaaaac 34310651  T
Q  295 cacaatctaaccaaagga-taaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctg 393  Q
    ||||||  |||||||||| ||||||||||       ||| ||||||||||||||||||||  | |||||| | ||||||||||||   ||||||||||||    
T  34310652 cacaattcaaccaaaggaataaacaagataaagagagtaaagaaaagataacaacaccaaagattgttcacccagttcggtccaaacttgacctactctg 34310751  T
Q  394 gaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||  ||||||||||||||||||||||||    
T  34310752 gaggagagattgatctctccaatccactatcaatgagttcttacaaaaagatac-aaatgtgttacaagaaattagcttcaacaa 34310835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 200 - 474
Target Start/End: Original strand, 4508548 - 4508822
Alignment:
Q  200 agcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccaca 298  Q
    |||||||||||||| |||||||||||||||| ||||| | |||||||||||||||||||| |||| |||||||| ||| ||||||||||| |||||||||    
T  4508548 agcaagtatcaatgccaaccaataaccaaatataaataaaccacaagcaataacaacaatatagacctagtctataaaccaagtgcatagcaaaaccaca 4508647  T
Q  299 atctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggagga 398  Q
    ||  ||||||||||||||||||||       ||| |||||| ||||||||||||||||||||||| | |||||||||||||  | |||||||||| || |    
T  4508648 attcaaccaaaggataaacaagataaagagagtaaagaaaatataacaacaccaagaaatgttcacccagttcggtccaac-ttaacctactctgaagaa 4508746  T
Q  399 gagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 474  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  4508747 gagattgatctctccaatccactctcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaa 4508822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 196 - 474
Target Start/End: Original strand, 4510386 - 4510664
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaac 294  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| |||||||| ||| ||||||||||| ||||     
T  4510386 gtggagcaagtatcaatggcaaccaataaccaaatgtaaataaaccacaagcaataacaacaatatagacctagtctataaatcaagtgcatagcaaaaa 4510485  T
Q  295 cacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 394  Q
    ||||||  ||| || |||||||||||||       ||| |||||||||||||||||||||||||||||| | ||| |||||||||  |||||||||||      
T  4510486 cacaattcaactaatggataaacaagatcaagagagtaaagaaaagataacaacaccaagaaatgttcacccagtacggtccaac-ttgacctactctac 4510584  T
Q  395 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 474  Q
    ||||||||||||| ||| ||||||||||| |||||||||||| |||||||||| ||||  |||||||||||||||||||||    
T  4510585 aggagagattgatttcttcaatccactatcaatgagttcttataaagagatac-aaatgggttacaagaaattagcttcaa 4510664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 196 - 474
Target Start/End: Original strand, 4512228 - 4512506
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaac 294  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| |||||||| ||| ||||||||||| ||||     
T  4512228 gtggagcaagtatcaatggcaaccaataaccaaatgtaaataaaccacaagcaataacaacaatatagacctagtctataaatcaagtgcatagcaaaaa 4512327  T
Q  295 cacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 394  Q
    ||||||  ||| || |||||||||||||       ||| |||||||||||||||||||||||||||||| | ||| |||||||||  |||||||||||      
T  4512328 cacaattcaactaatggataaacaagatcaagagagtaaagaaaagataacaacaccaagaaatgttcacccagtacggtccaac-ttgacctactctac 4512426  T
Q  395 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 474  Q
    ||||||||||||| ||| ||||||||||| |||||||||||| |||||||||| ||||  |||||||||||||||||||||    
T  4512427 aggagagattgatttcttcaatccactatcaatgagttcttataaagagatac-aaatgggttacaagaaattagcttcaa 4512506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 144 - 477
Target Start/End: Original strand, 22328183 - 22328510
Alignment:
Q  144 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 243  Q
    ||||||||||||||  |||| | |||| |||||||||||||||||||||||||||||| |||||| |||| |||| |||||  |||     || |||| |    
T  22328183 tgttgtgaattcgg--tcaattccaaatctcacatcaatgaaatttagattcgtggagtaagtattaatgacaacaaataattaaa-----ataaccaga 22328275  T
Q  244 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata 343  Q
    |  || || ||||||||||||||| || ||||| ||||||||||  |||||||||||| ||| |||| |||||||||||       ||||||||||||||    
T  22328276 aataacaaaaacaatctagatctaatcgagaaaccaagtgcataacaaaaccacaatcgaacaaaagaataaacaagataaagagagtagagaaaagata 22328375  T
Q  344 acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagtt-cttacaaaga 441  Q
    |||||||||| |||| || | | |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||| || ||| ||||||    
T  22328376 acaacaccaaaaaatatttacccagttcggtccaacaatgacctactctaggggagagattgatctctcaaatccactattaatgacttccttgcaaaga 22328475  T
Q  442 gatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||  |||||||||||||||||||||||||    
T  22328476 gatacaaaa-gagttacaagaaattagcttcaacaa 22328510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 32357897 - 32358173
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    |||||| ||||||||||| ||||||| ||||||| |||||   |||||||||| ||||| ||| |||| ||||| || ||  ||| ||||||  ||||||    
T  32357897 gtggagtaagtatcaatgacaaccaacaaccaaa-gtaaa---ccacaagcaacaacaataatatagacctagtttataatccaattgcataacaaaacc 32357992  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgga 395  Q
    |||||  || ||| | ||||||||| |       ||| |||||||||||||||||||||||||||||| | |||||||||||||  ||||||||||||||    
T  32357993 acaattcaagcaaggaataaacaagttaaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctgga 32358091  T
Q  396 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  32358092 ggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaa 32358173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 142 - 477
Target Start/End: Original strand, 48599121 - 48599453
Alignment:
Q  142 tatgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattacca 241  Q
    |||||| |||||| || ||||| | | ||| | |||||||| |||||||||||||||||||||||||||||| |||||||  |  |||||| ||   |||    
T  48599121 tatgttttgaatttggtctcaattccgaactttacatcaataaaatttagattcgtggagcaagtatcaatgacaaccaaacaaaaaatgttaa---cca 48599217  T
Q  242 caagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa 339  Q
    ||| ||| ||||| ||| ||  || |||||||| ||  |||||||| || ||||| |||||| |||||| | |||||||||||       ||| ||||||    
T  48599218 caaacaacaacaataatatatagacctagtctataat-caagtgcacagcaaaactacaatccaaccaaggaataaacaagataaagagagtaaagaaaa 48599316  T
Q  340 gataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaa 438  Q
    |||||||||| ||||||||||||| | |||||||||||||  ||| || ||||||||||||||||||||||||||||||||||| |||||| |||| |||    
T  48599317 gataacaacatcaagaaatgttcacccagttcggtccaact-tgatctgctctggaggagagattgatctctccaatccactatcaatgagctcttccaa 48599415  T
Q  439 agagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||| |||| |||||||||||||||||||||||||    
T  48599416 agagatac-aaatgagttacaagaaattagcttcaacaa 48599453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 6359792 - 6360071
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    ||||||||||||||||||| |||||| ||||||| |||||   |||||||||| ||||| ||| || | |||||||| ||| ||||||||||| ||||||    
T  6359792 gtggagcaagtatcaatgggaaccaacaaccaaa-gtaaa---ccacaagcaacaacaataatatatacctagtctataaaccaagtgcatagcaaaacc 6359887  T
Q  296 acaatctaaccaaagga-taaacaagatnnnnnnngtaga-gaaaagataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactct 392  Q
    |||||| |||  ||||| ||||||||||       | | | |||||||||||||||||||||||| ||| | | |||||| ||||||  ||||||| | |    
T  6359888 acaatccaacttaaggaataaacaagataaagaaagcaaatgaaaagataacaacaccaagaaattgttgacccagttcgatccaact-tgacctaatat 6359986  T
Q  393 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    || | |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  6359987 ggggaagagattgatctctccaatcaactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaa 6360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 347 - 477
Target Start/End: Complemental strand, 22270151 - 22270022
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    ||||||||| ||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  22270151 acaccaagagatgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatcagttcttacaaagagata 22270053  T
Q  446 caaaattagttacaagaaattagcttcaacaa 477  Q
    | ||||  ||||||||||||||||||||||||    
T  22270052 c-aaatgggttacaagaaattagcttcaacaa 22270022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 2360819 - 2361091
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    |||||||||||||||||||||||||| ||||||| ||||||   ||||||||| |||| |||| |||| |||||||||||| ||||||||||  ||||||    
T  2360819 gtggagcaagtatcaatggcaaccaacaaccaaa-gtaaat---cacaagcaacaacatcaatatagacctagtctagaaaccaagtgcatatcaaaacc 2360914  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgga 395  Q
    |||||  |||||| | |||||||||||        || |||||||| |    ||||||    | || | | |||||||| ||||  ||||||| |||||     
T  2360915 acaattcaaccaaggaataaacaagataaagagaataaagaaaagaca----caccaaaggttattgacccagttcggttcaact-tgacctaatctggg 2361009  T
Q  396 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  2361010 ggagagattgatatctcaaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaacaa 2361091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 358 - 477
Target Start/End: Complemental strand, 23555208 - 23555089
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| | |||    
T  23555208 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagaggtacaaaagt-gtt 23555110  T
Q  457 acaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||    
T  23555109 acaagaaattagcttcaacaa 23555089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 6432129 - 6432020
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  |||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||||    
T  6432129 agttcggtccaact-tgacctactctgaaggagagattgatctctccaatccactatcaacgagttcttacaaagagatac-aaatgggttacaagaaat 6432032  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  6432031 tagcttcaacaa 6432020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 382 - 471
Target Start/End: Complemental strand, 19502322 - 19502233
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 471  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||    
T  19502322 tgacttactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagttacaagaaattagctt 19502233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 35854082 - 35853969
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||   |||    
T  35854082 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 35853984  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  35853983 acaagaaattagctt 35853969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 358 - 477
Target Start/End: Original strand, 30024733 - 30024851
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||| ||| |||||||||||||  ||||||||||||| |||| ||||||||||||||||||||||| || |||||||||||||||||||| ||||  |||    
T  30024733 tgttgatccagttcggtccaact-tgacctactctgggggagtgattgatctctccaatccactatcaaagagttcttacaaagagatac-aaatgggtt 30024830  T
Q  457 acaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||    
T  30024831 acaagaaattagcttcaacaa 30024851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 27347975 - 27347866
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  27347975 agttcggtccaact-tgacctaatctgggggagagattgatctctgcaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 27347878  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  27347877 tagcttcaacaa 27347866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 29991221 - 29991108
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||   |||    
T  29991221 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttattagaaagagatacaaaa-gggtt 29991123  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  29991122 acaagaaattagctt 29991108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 347 - 463
Target Start/End: Complemental strand, 31519081 - 31518965
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggag-gagagattgatctctccaatccactat-aatgagttcttacaaagagat 444  Q
    ||||||||||||||| ||| |||||||||||||  ||||||||||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  31519081 acaccaagaaatgtttatccagttcggtccaact-tgacctactctggggagagagattgatctctccaatccactgtcaatgagttcttacaaagagat 31518983  T
Q  445 acaaaattagttacaagaa 463  Q
    || |||| |||||||||||    
T  31518982 ac-aaatgagttacaagaa 31518965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 382 - 477
Target Start/End: Original strand, 23565085 - 23565180
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||| |  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| ||||||||    
T  23565085 tgacctactctaggagagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagttacaagaaattagtttcaacaa 23565180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 358 - 468
Target Start/End: Complemental strand, 39731537 - 39731426
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  39731537 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gagt 39731439  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  39731438 tacaagaaattag 39731426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 382 - 477
Target Start/End: Complemental strand, 48491723 - 48491628
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||  ||||||||||||||||||||||||    
T  48491723 tgacctaatctgggggagagattgatctctccaatccactatcaatgagttctttcaaagagatac-aaatgggttacaagaaattagcttcaacaa 48491628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 2759207 - 2759316
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| | |||||||||| ||||||||||||||| ||||||||||||||||||||||  |||| |||||||||||||    
T  2759207 agttcggtccaact-tgacctaatctggggaagagattgatatctccaatccactatcaatgagttcttacaaagagata-taaatgagttacaagaaat 2759304  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  2759305 tagcttcaacaa 2759316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 25616012 - 25615902
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    ||||||||||||   ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||  ||||| ||||  ||||||||||||    
T  25616012 agttcggtccaaacttgacctactctggaggagagattgatctctctaatccactatcaatgagttcttacaaaatgatac-aaatgggttacaagaaat 25615914  T
Q  466 tagcttcaacaa 477  Q
    |||||| |||||    
T  25615913 tagcttaaacaa 25615902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 48489589 - 48489480
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| |||||||| || ||||||||||| ||||  ||||||||||||    
T  48489589 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatgaatgagttattgcaaagagatac-aaatgggttacaagaaat 48489492  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  48489491 tagcttcaacaa 48489480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 382 - 471
Target Start/End: Complemental strand, 8153486 - 8153397
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 471  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| |||| |||||||||||||||||||    
T  8153486 tgacctaatctgggggagagattgatctctccaatccactatcaatgagttattacaaagagatac-aaatgagttacaagaaattagctt 8153397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 382 - 471
Target Start/End: Original strand, 25766984 - 25767074
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 471  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||  ||||||||||||||   ||||||||||||||||||    
T  25766984 tgacctactctggaggagagattgaactctccaatccactatcaatgagttcttcaaaagagatacaaaaggggttacaagaaattagctt 25767074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 396 - 477
Target Start/End: Original strand, 47673981 - 47674062
Alignment:
Q  396 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  47673981 ggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaa 47674062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 14069843 - 14069946
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  14069843 agttcggtccaact-tgacctaatcttggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 14069940  T
Q  466 tagctt 471  Q
    ||||||    
T  14069941 tagctt 14069946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 14379871 - 14379974
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  14379871 agttcggtccaact-tgacctaatctaggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 14379968  T
Q  466 tagctt 471  Q
    ||||||    
T  14379969 tagctt 14379974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 349 - 477
Target Start/End: Original strand, 31105385 - 31105512
Alignment:
Q  349 accaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagataca 447  Q
    ||||||||||||| | | |||||||||||||  ||| ||||||| | ||||||||| ||||||||||||||| || |||||||||||||||| |||||||    
T  31105385 accaagaaatgtttacccagttcggtccaact-tgatctactcttggggagagatttatctctccaatccaccatcaatgagttcttacaaaaagataca 31105483  T
Q  448 aaattagttacaagaaattagcttcaacaa 477  Q
    || |  ||||||||||||||||||||||||    
T  31105484 aa-tgggttacaagaaattagcttcaacaa 31105512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 358 - 477
Target Start/End: Original strand, 47676137 - 47676255
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||| ||| |||||||||||||  ||||||| | ||| ||||||||||||||||||| |||||||| | ||||||||||||||||||||| ||||  |||    
T  47676137 tgttgatccagttcggtccaact-tgacctaatatgggggagagattgatctctccattccactatcattgagttcttacaaagagatac-aaatgggtt 47676234  T
Q  457 acaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||    
T  47676235 acaagaaattagcttcaacaa 47676255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 367 - 473
Target Start/End: Original strand, 31732979 - 31733084
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  31732979 agttcggtccaact-tgacctaatttgggggagagattgatctctccaatccagtatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 31733076  T
Q  466 tagcttca 473  Q
    ||||||||    
T  31733077 tagcttca 31733084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 396 - 477
Target Start/End: Complemental strand, 4586291 - 4586210
Alignment:
Q  396 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||  ||||||| ||||||||||||||||    
T  4586291 ggagagattgatctctccaatccactatcaatgagttcttacaaagagata-aaaatgggttacaaaaaattagcttcaacaa 4586210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 365 - 477
Target Start/End: Original strand, 36146416 - 36146526
Alignment:
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 463  Q
    |||||||||||||||  ||||||| | ||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||  ||||| ||||    
T  36146416 ctagttcggtccaact-tgacctaatatgggggagagattgatctctcaaatccactatcaatgagttcttacaaagagatac-aaatgggttac-agaa 36146512  T
Q  464 attagcttcaacaa 477  Q
    ||||||||||||||    
T  36146513 attagcttcaacaa 36146526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 41317444 - 41317547
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||   |||||||||||    
T  41317444 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatggattacaagaaat 41317541  T
Q  466 tagctt 471  Q
    ||||||    
T  41317542 tagctt 41317547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 382 - 477
Target Start/End: Original strand, 496007 - 496102
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||| | | |||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||  ||| ||||||||||||||||||||    
T  496007 tgacctactataggggagagattgatctctccaatccactatcaatgagttcttataaagagatac-aaatgggttgcaagaaattagcttcaacaa 496102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 382 - 477
Target Start/End: Complemental strand, 1113801 - 1113706
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| | ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||  |||| |||||||||||||||||||    
T  1113801 tgacctaatatgggggagagattgatctctccaatctactatcaatgagttcttacaaagagatac-aaatgggttataagaaattagcttcaacaa 1113706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 347 - 477
Target Start/End: Original strand, 4253518 - 4253648
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagat 444  Q
    ||||||||||||||| | |||||||||||||| | ||||||||||||  ||||||||||||||||| |||||| ||| ||||||||| || |||||||||    
T  4253518 acaccaagaaatgtttacctagttcggtccaa-attgacctactctgtgggagagattgatctctctaatccattatcaatgagttctttccaaagagat 4253616  T
Q  445 acaaaattagttacaagaaattagcttcaacaa 477  Q
    | ||||   |||||| |||||||||||||||||    
T  4253617 ataaaa-gggttacatgaaattagcttcaacaa 4253648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 382 - 477
Target Start/End: Complemental strand, 18126788 - 18126693
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| ||||| ||||||||||||  |||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||    
T  18126788 tgacctagtctgggggagagattgattcctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttgaacaa 18126693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 367 - 470
Target Start/End: Original strand, 41649021 - 41649123
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||    
T  41649021 agttcggtccaact-tgacctaatttgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaat 41649118  T
Q  466 tagct 470  Q
    |||||    
T  41649119 tagct 41649123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 382 - 468
Target Start/End: Original strand, 43504178 - 43504266
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagttacaagaaattag 468  Q
    ||||||||| ||||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||  ||||||||||||||||    
T  43504178 tgacctactatggaggagagattgaactctccaattcactatcaatgagttcttacaaaagagatacaaaaagagttacaagaaattag 43504266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 43864402 - 43864293
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| |||||  ||||||||||||||||||||||||||| ||| |||| |||||||||||||| ||||  |||||| |||||    
T  43864402 agttcggtccaact-tgacctaatctgggagagagattgatctctccaatccactatcaattagtttttacaaagagatac-aaatgggttacaggaaat 43864305  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  43864304 tagcttcaacaa 43864293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 20344064 - 20343951
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 454  Q
    |||||| | |||||||||||||  ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  20344064 tgttcacccagttcggtccaact-tgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 20343968  T
Q  455 ttacaagaaattagctt 471  Q
    |||||||||||||||||    
T  20343967 ttacaagaaattagctt 20343951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 396 - 477
Target Start/End: Complemental strand, 26417446 - 26417365
Alignment:
Q  396 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  |||||||||||||| |||||||||    
T  26417446 ggagagattgatctctccaatccactatcaacgagttcttacaaagagatac-aaatgggttacaagaaattatcttcaacaa 26417365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 18396477 - 18396367
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaa 464  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||||||||| |||| ||||| ||| ||| |||||||||||||||  ||||||| |||    
T  18396477 agttcggtccaccattgacctactcttgaggagagattgatctctccaatcctctatcaatgaattctttataaagagatacaaaat--gttacaaaaaa 18396380  T
Q  465 ttagcttcaacaa 477  Q
     ||| ||||||||    
T  18396379 ataggttcaacaa 18396367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 382 - 449
Target Start/End: Original strand, 24525526 - 24525594
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaa 449  Q
    ||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24525526 tgacctaatcttggggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaa 24525594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 471
Target Start/End: Complemental strand, 48408984 - 48408857
Alignment:
Q  347 acaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagaga 443  Q
    |||||||||||| ||||| | ||||||||| ||   |||| |||||||||||||||||| | |||||||||||||||| |||||||| || | |||||||    
T  48408984 acaccaagaaattgttcacccagttcggtctaaacttgacatactctggaggagagattaaactctccaatccactatcaatgagttatttcaaaagaga 48408885  T
Q  444 tacaaaattagttacaagaaattagctt 471  Q
    |||||||   ||||||||||||||||||    
T  48408884 tacaaaaggggttacaagaaattagctt 48408857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 467
Target Start/End: Original strand, 3904626 - 3904726
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaa 464  Q
    |||||||||||||||||||||||||||  |||||||||||||||||  || |||||| ||||||||| |||||||||||| ||||| | |||||||||||    
T  3904626 agttcggtccaacaatgacctactctgagggagagattgatctctctgat-cactatcaatgagttctttacaaagagatgcaaaagt-gttacaagaaa 3904723  T
Q  465 tta 467  Q
    |||    
T  3904724 tta 3904726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 347 - 477
Target Start/End: Complemental strand, 23344151 - 23344024
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    ||||||||||||||| | || ||||||||||||  |||||||||||||  |||||||| || ||||||||| | ||| |||||||||| ||||||| |||    
T  23344151 acaccaagaaatgtttaccttgttcggtccaact-tgacctactctgg--gagagattaatttctccaatctattatcaatgagttctcacaaagatata 23344055  T
Q  446 caaaattagttacaagaaattagcttcaacaa 477  Q
    | |||   ||||||||||||||||||||||||    
T  23344054 ctaaagg-gttacaagaaattagcttcaacaa 23344024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 24790009 - 24789896
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   |||||||||||||||||||||| |  |||||||||||||||| || ||||| |||| |||| ||||||||||  ||    
T  24790009 tgttcacccagttcggtccaaacttgacctactctggaggagagatagtactctccaatccactatcaaagagtttttacaaaagggatacaaaat--gt 24789912  T
Q  456 tacaagaaattagctt 471  Q
    ||||||||||||||||    
T  24789911 tacaagaaattagctt 24789896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 367 - 439
Target Start/End: Original strand, 1560675 - 1560749
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttacaaa 439  Q
    ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||||||    
T  1560675 agttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaa 1560749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 471
Target Start/End: Complemental strand, 4178917 - 4178829
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 471  Q
    |||||| |||||||||||||||||| || | ||||||||||| ||||||||||| |||||||||||||||   ||||||||||||||||||    
T  4178917 tgacctgctctggaggagagattgaactgttcaatccactatcaatgagttctt-caaagagatacaaaa-gggttacaagaaattagctt 4178829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 351 - 477
Target Start/End: Original strand, 36574510 - 36574635
Alignment:
Q  351 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctt-acaaagagatacaa 448  Q
    ||||||||||| | | |||| ||||||| | ||||||||||| | |||  ||||||||||||||| ||||||| ||||||||||| ||||||||||| ||    
T  36574510 caagaaatgtttacccagtttggtccaa-attgacctactctag-ggatggattgatctctccaaaccactatcaatgagttctttacaaagagatataa 36574607  T
Q  449 aattagttacaagaaattagcttcaacaa 477  Q
    ||   ||||||||||||||||||||||||    
T  36574608 aagg-gttacaagaaattagcttcaacaa 36574635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 434
Target Start/End: Original strand, 18388760 - 18388838
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  18388760 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 18388838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 434
Target Start/End: Original strand, 18392196 - 18392274
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  18392196 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 18392274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 434
Target Start/End: Original strand, 32060322 - 32060400
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  32060322 tgttcaccaagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 32060400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 38671232 - 38671341
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| ||| ||||| |||||| ||||||||||| ||||||||||||||||| ||||| ||||  ||||||| ||||    
T  38671232 agttcggtccaact-tgacctattttgggggatagatttatctcttcaatccactatcaatgagttcttacaaagtgatac-aaatgtgttacaataaat 38671329  T
Q  466 tagcttcaacaa 477  Q
    |||||| |||||    
T  38671330 tagcttaaacaa 38671341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 419
Target Start/End: Complemental strand, 26639484 - 26639432
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatcca 419  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||| ||||||    
T  26639484 agttcggtacaacaatgacatactatggaggagagattgatctctctaatcca 26639432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 373 - 450
Target Start/End: Complemental strand, 5116758 - 5116679
Alignment:
Q  373 gtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaa 450  Q
    ||||||||||||  | || ||| ||||||||| ||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  5116758 gtccaacaatgatttgctatgggggagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 5116679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 434
Target Start/End: Original strand, 6592340 - 6592418
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  6592340 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 6592418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 434
Target Start/End: Original strand, 6594558 - 6594636
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  6594558 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 6594636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 431
Target Start/End: Original strand, 12097875 - 12097940
Alignment:
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagtt 431  Q
    |||||||||||||||  ||||||| ||||| ||||||||| ||||||||||||||||| || |||||    
T  12097875 ctagttcggtccaact-tgacctaatctgggggagagattcatctctccaatccactacaaagagtt 12097940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 474
Target Start/End: Complemental strand, 31518896 - 31518847
Alignment:
Q  424 aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 474  Q
    ||||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  31518896 aatgagttcttacaaagagatac-aaatgagttacaagaaactagcttcaa 31518847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 431
Target Start/End: Complemental strand, 30814594 - 30814530
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt 431  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||    
T  30814594 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagtt 30814530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 450
Target Start/End: Original strand, 5513661 - 5513760
Alignment:
Q  351 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaa 448  Q
    ||||||||||| | | ||||| |||||| | |||||||||||||||| ||||||||| |||||||| || | | ||||||||| ||||||||||||| ||    
T  5513661 caagaaatgtttacccagttcagtccaa-attgacctactctggaggtgagattgat-tctccaattcagtgtcaatgagttctttacaaagagatataa 5513758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 229
Target Start/End: Complemental strand, 22270274 - 22270241
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaa 229  Q
    |||||||||||||||||||||||||| |||||||    
T  22270274 gtggagcaagtatcaatggcaaccaacaaccaaa 22270241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 229
Target Start/End: Complemental strand, 30814723 - 30814690
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaa 229  Q
    |||||||||||||||||||||||||| |||||||    
T  30814723 gtggagcaagtatcaatggcaaccaacaaccaaa 30814690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 146 - 477
Target Start/End: Complemental strand, 41964794 - 41964464
Alignment:
Q  146 ttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaa 244  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||    
T  41964794 ttgtgaattcggtctcaaattccaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaacaatcaaatgtaaataaccacaa 41964695  T
Q  245 gcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataa 344  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||       ||| |||||||||||    
T  41964694 gcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaaccacaatctaaccaaaggataaacaagat--agagagtaaagaaaagataa 41964597  T
Q  345 caacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagaga 443  Q
    ||||||||||||||| ||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  41964596 caacaccaagaaatgctcacccagttcggtccaac-ttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaaggga 41964498  T
Q  444 tacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||  ||||||| |||||||||| |||||    
T  41964497 tacaaaatgggttacaataaattagcttaaacaa 41964464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 144 - 477
Target Start/End: Complemental strand, 379763 - 379429
Alignment:
Q  144 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 242  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||    
T  379763 tgttgtgaattcggtctcaaattccaaacctcacatcaatgaaatttagattcgtggagcaagtatcagtggcaaccaataatcaaatgtaaataaccac 379664  T
Q  243 aagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagat 342  Q
    || ||| ||||||||| |||| |||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||||       ||| |||||||||    
T  379663 aaacaacaacaacaatatagacctagtctataaaccaagtgcataacaaaaccacaatctaaccaaaggataaacaagataaagagagtaaagaaaagat 379564  T
Q  343 aacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaaga 441  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||     
T  379563 aacaacaccaagaaatgttcatccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactatcaattagttcttacaaagc 379464  T
Q  442 gatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||| ||||  ||||||||||||||||||||||||    
T  379463 gatac-aaatgggttacaagaaattagcttcaacaa 379429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 144 - 477
Target Start/End: Complemental strand, 12073773 - 12073441
Alignment:
Q  144 tgttgtgaattcggactcaaatt-caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 242  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||||| ||| ||||||||||||||||||||||  || ||||||  | ||   |||||    
T  12073773 tgttgtgaattcggtctcaaatttcaaacctcacaccaatgaaatttaaatttgtggagcaagtatcaatggcaataaacaaccaa--ggaataaaccac 12073676  T
Q  243 aagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagat 342  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||  ||||||||||||||||||||| |||||||||||       ||| |||||||||    
T  12073675 aagcaacaacaacaatctagatctaatctagaaaccaagtgcataacaaaaccacaatctaaccaaagaataaacaagataaagagagtaaagaaaagat 12073576  T
Q  343 aacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaaga 441  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  12073575 aacaacaccaagaaatgttcacctagttcggtccaacaatgacctactctggaagagagattgatctctccaatccactatcaatgagttcttacaaaga 12073476  T
Q  442 gatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||| |||| |||||||| ||||||||||||||||    
T  12073475 gatac-aaatgagttacaataaattagcttcaacaa 12073441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 196 - 477
Target Start/End: Complemental strand, 2210048 - 2209762
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  2210048 gtggagcaagtatcaatggcaaccaataaccaaatgtaaataaccacaaacaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaacc 2209949  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaa---agataacaacaccaaga-aatgttcatctagttcggtccaacaatgacctactc 391  Q
    |||||||||||||| ||||||||||||       |||||||||   ||| ||||||||||||| | |||||| | ||||||||||||| |||||||||||    
T  2209948 acaatctaaccaaatgataaacaagataaagagagtagagaaaaatagacaacaacaccaagagattgttcacccagttcggtccaaccatgacctactc 2209849  T
Q  392 tggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  2209848 tggaggagagattaatctctccaatccactatcaatgagttcttacaaagagatacaaaatgggttacaagaaattagcttcaacaa 2209762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 50673686 - 50673966
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||| ||  ||||||||||| ||||||    
T  50673686 gtggagcaagtatcaatgtcaaccaataaccaaatgtaaatcaccataagcaataacaacaatatagatctagtctataat-caagtgcatagcaaaacc 50673784  T
Q  296 acaatctaaccaaagga-taaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 394  Q
    |||||| ||   ||||| ||||||||||       ||| |||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  50673785 acaatccaaagcaaggaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacctagttcggtccaac-ttgacctactctgg 50673883  T
Q  395 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  50673884 aggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaacaa 50673966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 144 - 477
Target Start/End: Complemental strand, 35662816 - 35662490
Alignment:
Q  144 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 243  Q
    ||||||||||||||  |||| | ||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||  |||    ||| |    
T  35662816 tgttgtgaattcgg--tcaattccaaacttcacatcaatgaaatttagatttgtggagcaagtatcaatggcaaccaacaaccaaaattaa----ccata 35662723  T
Q  244 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata 343  Q
    ||||| ||||||||| ||||  ||||||| ||| ||||||||||| |||||||||||| |||||| | |||||||||||       ||| ||||||||||    
T  35662722 agcaacaacaacaatatagacatagtctataaaccaagtgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaagaaaagata 35662623  T
Q  344 acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagag 442  Q
    |||||||||| ||||||||||  |||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  35662622 acaacaccaaaaaatgttcattcagttcggtccaac-ttgacctactcttgaggagatattgatctctccaatccactatcaatgagttcttacaaagag 35662524  T
Q  443 atacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||| |||| |||||||||||||||||||||||||    
T  35662523 atac-aaatgagttacaagaaattagcttcaacaa 35662490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 199 - 477
Target Start/End: Complemental strand, 40632772 - 40632494
Alignment:
Q  199 gagcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccac 297  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| |||||||| | | ||||||||| | ||||||||    
T  40632772 gagcaagtatcaatggcaaccaataaccaaatgtaaataaaccacaagcaataacaacaatatagacctagtctatataccaagtgcatggcaaaaccac 40632673  T
Q  298 aatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggagg 397  Q
    |||  ||||||||||||||||||||       ||| | |||||||||||||||||||||||||| | | |||||||||||||  |||| |||| | ||||    
T  40632672 aattcaaccaaaggataaacaagataaagagagtaaaaaaaagataacaacaccaagaaatgtttacccagttcggtccaac-ttgacttactttagagg 40632574  T
Q  398 agagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  40632573 agagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaataggttacaagaaattagcttcaacaa 40632494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 144 - 477
Target Start/End: Complemental strand, 8665787 - 8665457
Alignment:
Q  144 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaatt-----a 238  Q
    ||||||||||||||  |||| ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||   |||||     |    
T  8665787 tgttgtgaattcgg--tcaatttcaaacttcacttcaatgaaatttagattcgtcgagcaagtatcaatggcaaccaacaaccaaaa--aaattgattaa 8665692  T
Q  239 ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaa 338  Q
    |||||||||| ||||||||| ||| |||| |||| ||  ||| ||||||| |||||||||||| |||||| | |||||||||||       ||| |||||    
T  8665691 ccacaagcaacaacaacaatatag-tcta-tctataat-caaatgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaagaaa 8665595  T
Q  339 agataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttaca 437  Q
    |||||||||||||||||||||| || |||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8665594 agataacaacaccaagaaatgtacacctagtttggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttaca 8665496  T
Q  438 aagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||| ||||  ||||||||||||||||||||||||    
T  8665495 aagagatac-aaatgggttacaagaaattagcttcaacaa 8665457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 162 - 477
Target Start/End: Original strand, 26699251 - 26699562
Alignment:
Q  162 aaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatcta 261  Q
    |||| |||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||     | ||||||||  |  |||||||||||    
T  26699251 aaatccaaacctcacatcaatgaaatttagattcgtgggacaggtatcaatggcaaccaataaccaaat-----taaccacaagacacgacaacaatcta 26699345  T
Q  262 gatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgtt 361  Q
    |||||| |||||||  ||||||||||| ||||||| |||  |||||||| |||||||||||       ||| ||||||||||||  ||| ||||||| ||    
T  26699346 gatctaatctagaatccaagtgcatagcaaaaccataattgaaccaaagaataaacaagataaagagagtaaagaaaagataacggcactaagaaatttt 26699445  T
Q  362 catctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttaca 459  Q
     | | ||||||||||||||||||||||||||||   |||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||  |||||||    
T  26699446 tacccagttcggtccaacaatgacctactctgggatagagattgatctctccaatccattataaatgagttctttacaaagagatacaaaa-gagttaca 26699544  T
Q  460 agaaattagcttcaacaa 477  Q
    ||||||||||||||||||    
T  26699545 agaaattagcttcaacaa 26699562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 290 - 477
Target Start/End: Complemental strand, 46703737 - 46703549
Alignment:
Q  290 aaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctac 389  Q
    |||||||||||||||||||| ||||||||||||       ||| |||||||||||||||||||||||||||||| | | |||||||||||||||||||||    
T  46703737 aaaaccacaatctaaccaaatgataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccaattcggtccaacaatgacctac 46703638  T
Q  390 tctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  46703637 tctggaggagagattgatctctccaatccactataaatgagttcttacaaagagatacaaaatgggttacaagaaattagcttaaacaa 46703549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 144 - 477
Target Start/End: Complemental strand, 8648526 - 8648188
Alignment:
Q  144 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaatt-----a 238  Q
    ||||||||||||||  |||| | ||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||   |||||     |    
T  8648526 tgttgtgaattcgg--tcaattacaaacttcacttcaatgaaatttagattcgtcgagcaagtatcaatggcaaccaacaaccaaaa--aaattgattaa 8648431  T
Q  239 ccacaagcaataacaacaatcta--gatctagtctaga---aaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtag 333  Q
    |||||||||| ||||||||| ||  || ||||||||     || ||| ||||||| |||||||||||| |||||| | |||||||||||       |||     
T  8648430 ccacaagcaacaacaacaatatatagacctagtctatctataatcaaatgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaa 8648331  T
Q  334 agaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc 432  Q
    |||||||||||||||||||||||||||||| | |||| ||||||||  |||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  8648330 agaaaagataacaacaccaagaaatgttcacccagtttggtccaact-tgacctactctggaggagagattgatctctccaatccaatatcaatgagttc 8648232  T
Q  433 ttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||| ||||  |||| |||||||||||||||||||    
T  8648231 ttacaaagagatac-aaatgggttataagaaattagcttcaacaa 8648188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 196 - 474
Target Start/End: Complemental strand, 41639754 - 41639478
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaaca---atctagatctagtctagaaaacaagtgcatagaaaa 292  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||||| |||||     || |||| |||||||| ||  ||||||||||| |||    
T  41639754 gtggagcaagtatcaatggcaaccaataaccaaatgtaaa---ccacaagcaacaacaaatgatatatagacctagtctataat-caagtgcatagcaaa 41639659  T
Q  293 accacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactct 392  Q
    ||||||||  ||||||||||||||||||||       ||| ||||| ||||||||||||||||||||||||   |||||||||||||  |||||||||||    
T  41639658 accacaattcaaccaaaggataaacaagataaagagagtaaagaaacgataacaacaccaagaaatgttcactcagttcggtccaact-tgacctactct 41639560  T
Q  393 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 474  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| |||||| ||||  |||||||||||||||||||||    
T  41639559 ggaggagagattgatctctccaatccactatcgatgagttcttacaaatagatac-aaatgggttacaagaaattagcttcaa 41639478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 167 - 477
Target Start/End: Complemental strand, 33990199 - 33989893
Alignment:
Q  167 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatct 266  Q
    |||| |||||| ||||||||| |||||| ||||  |||||||||||||||| |||||||||||     || | ||||||||| |||||||||||||||||    
T  33990199 caaatctcacaccaatgaaatctagatttgtgggacaagtatcaatggcaatcaataaccaaa-----ataaacacaagcaacaacaacaatctagatct 33990105  T
Q  267 agtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatct 366  Q
    | |||||||| ||||||||||| ||| ||| |||  |||||||| |||||||||||       ||||| |||| |||| |||||||||||||||| | |     
T  33990104 aatctagaaaccaagtgcatagcaaatccagaattgaaccaaagaataaacaagataaagagagtagaaaaaatataataacaccaagaaatgtttaccc 33990005  T
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagtt-cttacaaagagatacaaaattagttacaagaaa 464  Q
    |||||  ||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||  ||||||||||||||||||  | ||||||||||    
T  33990004 agttcaatccaagaatgacctactctggtggagagattgatctctccaatccactattaacgagttatttacaaagagatacaaaagga-ttacaagaaa 33989906  T
Q  465 ttagcttcaacaa 477  Q
    |||||||||||||    
T  33989905 ttagcttcaacaa 33989893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 276 - 477
Target Start/End: Complemental strand, 6656205 - 6656005
Alignment:
Q  276 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtc 375  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||||||       ||| |||||||||||||||||||||||||||||| | | |||||||    
T  6656205 aacaagtgcatagcaaaaccacaatccaacaaaaggataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccaattcggtc 6656106  T
Q  376 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 474  Q
    ||||  |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  6656105 caact-tgacctactctggatgagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaa 6656008  T
Q  475 caa 477  Q
    |||    
T  6656007 caa 6656005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 180 - 474
Target Start/End: Complemental strand, 12119893 - 12119591
Alignment:
Q  180 aatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaa-------tctagatctagtcta 272  Q
    |||||||||||||||| ||||||||||||||||| |||||  |||| |||    ||| ||||||||||| ||||||||       |||||||||| ||||    
T  12119893 aatgaaatttagattcatggagcaagtatcaatgacaaccggtaacaaaa----aataaccacaagcaacaacaacaacaatcaatctagatctaatcta 12119798  T
Q  273 gaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata----acaacaccaagaaat-gttcatcta 367  Q
    ||||  |||||||||| ||||||||||||  |||||||  ||||||||||       |||||||||| |||    ||||||||||||||| ||||| |||    
T  12119797 gaaactaagtgcatagcaaaaccacaatcggaccaaagactaaacaagataaagagagtagagaaaaaatagatgacaacaccaagaaattgttcaccta 12119698  T
Q  368 gttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaat 465  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||   ||||||||||||    
T  12119697 gttcggtccaacaatgacctactcttg-ggagagattgatctctccaatccactataaatgagttctttacaaagagatacaaaa-gggttacaagaaat 12119600  T
Q  466 tagcttcaa 474  Q
    |||||||||    
T  12119599 tagcttcaa 12119591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 142 - 477
Target Start/End: Complemental strand, 26364618 - 26364285
Alignment:
Q  142 tatgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaa--tgtaaattac 239  Q
    ||||||||||| ||||  |||| | ||||| | ||||||||||||||||||||||||||||||||||||||| ||| ||| ||  |||  ||| || |||    
T  26364618 tatgttgtgaactcgg--tcaattccaaactttacatcaatgaaatttagattcgtggagcaagtatcaatgacaatcaacaataaaaaatgttaactac 26364521  T
Q  240 cacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaa 337  Q
       |||||| ||||||||| ||  || |||||||| ||   ||||| |||| |||||||||||| || ||| | |||||||||||       ||| ||||    
T  26364520 ---aagcaacaacaacaatatatagacctagtctataatt-aagtgtatagcaaaaccacaatccaagcaaggaataaacaagataaagagagtaaagaa 26364425  T
Q  338 aagataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagttctta 435  Q
    ||||||||||||||||||||| ||| | | ||||| ||| |||  ||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  26364424 aagataacaacaccaagaaattgttgacccagttcagtcaaact-tgacctaatctgggggagagattgatctctccaatccactattaatgagttctta 26364326  T
Q  436 caaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  26364325 caaagagatac-aaatgagttacaagaaattagcttcaacaa 26364285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 50262534 - 50262820
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaaa 293  Q
    |||||||||||||||||| ||||||| || ||||   || | ||||||||||| ||||||||| ||  || ||||| | | || ||||||||| | ||||    
T  50262534 gtggagcaagtatcaatgacaaccaacaagcaaaaaaaattaaccacaagcaacaacaacaatatatagacctagtat-gtaatcaagtgcatggcaaaa 50262632  T
Q  294 ccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa---gataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctac 389  Q
    |||||||| ||  || | |||||||||||       ||||||||||   || ||||||||||||| || ||||| | |||||||||||||||||||||||    
T  50262633 ccacaatccaagtaaggaataaacaagataaaaagagtagagaaaaatagacaacaacaccaagagattgttcacccagttcggtccaacaatgacctac 50262732  T
Q  390 tctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||| |||||||| ||||||||| ||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  50262733 tctggaggaaagattgatatctccaatcaactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaa 50262820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 142 - 355
Target Start/End: Original strand, 55085233 - 55085439
Alignment:
Q  142 tatgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattacca 241  Q
    ||||||||||||| ||  |||| | ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| || |||||     | || |    
T  55085233 tatgttgtgaatttgg--tcaattccaaacttcacatcaatgaaatttagattcatggagcaagtatcaatgacaaccaacaatcaaat-----taacta 55085325  T
Q  242 caagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaaga 341  Q
    |||||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||| |||||| | |||||||||||       ||| ||||||||    
T  55085326 caagcaataacaacaatctagatctaatttagaaaccaagtgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaagaaaaga 55085425  T
Q  342 taacaacaccaaga 355  Q
    ||||||||||||||    
T  55085426 taacaacaccaaga 55085439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 276 - 477
Target Start/End: Original strand, 27416884 - 27417084
Alignment:
Q  276 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtc 375  Q
    ||||||||||| | |||||||||||| |||||||| |||||||||||       ||| ||| ||||||||||||||||  | |||| |   |||||||||    
T  27416884 aacaagtgcatggcaaaaccacaatccaaccaaagaataaacaagataaagagagtaaagacaagataacaacaccaaagattgttgactcagttcggtc 27416983  T
Q  376 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 474  Q
    ||||  ||||||| ||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||  |||||||||||||||||||||    
T  27416984 caact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagtttttacaaagagatac-aaatgggttacaagaaattagcttcaa 27417081  T
Q  475 caa 477  Q
    |||    
T  27417082 caa 27417084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 146 - 322
Target Start/End: Complemental strand, 46703929 - 46703752
Alignment:
Q  146 ttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaa 244  Q
    ||||||||| || || |||||| |||| ||||||||| ||| ||||||||||||||| ||||||||||  |||||||||||||||||||||| ||| |||    
T  46703929 ttgtgaatttggtcttaaattccaaacttcacatcaaagaa-tttagattcgtggagtaagtatcaataacaaccaataaccaaatgtaaataacctcaa 46703831  T
Q  245 gcaataacaaca--atctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagat 322  Q
    |||| |||||||  || |||| ||| ||||  || ||||||||||| |||||||||||||||||||||||||||||||||    
T  46703830 gcaacaacaacaatatatagacctattcta-taatcaagtgcatagcaaaaccacaatctaaccaaaggataaacaagat 46703752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 358 - 477
Target Start/End: Original strand, 56178637 - 56178756
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  56178637 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 56178735  T
Q  457 acaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||    
T  56178736 acaagaaattagcttcaacaa 56178756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 54883210 - 54883069
Alignment:
Q  336 aaaagataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttct 433  Q
    ||||||||||||||||||||||| ||| | | |||||||||||||  |||| || ||||||||||||||||||| |||||||||||||| ||||||||||    
T  54883210 aaaagataacaacaccaagaaattgttgacccagttcggtccaact-tgacttaatctggaggagagattgatccctccaatccactatcaatgagttct 54883112  T
Q  434 tacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||    
T  54883111 tacaaagagatac-aaatgggttacaagaaattagcttcaacaa 54883069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 290 - 477
Target Start/End: Complemental strand, 33090116 - 33089927
Alignment:
Q  290 aaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaa-gaaatgttcatctagttcggtccaacaatgaccta 388  Q
    |||||||||||| |||||||  |||||||||||       | |||||||||| ||||||  ||| ||| |||| ||||||| |||||||||||| |||||    
T  33090116 aaaaccacaatcgaaccaaaaaataaacaagataaagagagcagagaaaagagaacaacttcaaagaattgtttatctagtccggtccaacaataaccta 33090017  T
Q  389 ctctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||| ||||||||||||||||||| |||||||||| ||||||||| ||||| |||||||||||| | |||| || ||||||||||||||||    
T  33090016 ctctagaggagagattgatctctctaatccactatcaatgagttctttacagagagatacaaaa-tggttataataaattagcttcaacaa 33089927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 9927468 - 9927577
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  9927468 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 9927565  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  9927566 tagcttcaacaa 9927577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 347 - 477
Target Start/End: Complemental strand, 31474329 - 31474200
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    ||||||||| ||||| | | |||||||||||||  ||| ||||||||| ||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  31474329 acaccaagatatgtttacccagttcggtccaact-tgatctactctggtggagagatttatctctccaatcaactatcaatgagttcttacaaagagata 31474231  T
Q  446 caaaattagttacaagaaattagcttcaacaa 477  Q
    |||| | |||||||||||||||||||||||||    
T  31474230 caaa-tgagttacaagaaattagcttcaacaa 31474200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 48893648 - 48893757
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||| |||| |||||||||||||    
T  48893648 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaaagagttcttacaaagagatac-aaatgagttacaagaaat 48893745  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  48893746 tagcttcaacaa 48893757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 356 - 471
Target Start/End: Original strand, 29999804 - 29999920
Alignment:
Q  356 aatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaatta 453  Q
    |||||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||  |    
T  29999804 aatgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaaaaagatacaaaa-ga 29999902  T
Q  454 gttacaagaaattagctt 471  Q
    ||||||||||||||||||    
T  29999903 gttacaagaaattagctt 29999920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 382 - 477
Target Start/End: Complemental strand, 48143187 - 48143092
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||   ||||||||||||||||||||||||    
T  48143187 tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttatgaagagatacaaaa-gggttacaagaaattagcttcaacaa 48143092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 358 - 468
Target Start/End: Original strand, 13992293 - 13992402
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| ||||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||  ||||    
T  13992293 tgttcacctagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttac-aagagatacaaaa-gagtt 13992390  T
Q  457 acaagaaattag 468  Q
    ||||||||||||    
T  13992391 acaagaaattag 13992402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 26175646 - 26175755
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  26175646 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 26175743  T
Q  466 tagcttcaacaa 477  Q
    ||| ||||||||    
T  26175744 tagtttcaacaa 26175755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 37740783 - 37740674
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||| | ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  37740783 agttcggtccaact-tgaccaaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 37740686  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  37740685 tagcttcaacaa 37740674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 5370092 - 5370196
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    ||||||||||||   ||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||   ||||||||||||    
T  5370092 agttcggtccaaacttgacctactctggaggagagattgatctctctagtccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaat 5370190  T
Q  466 tagctt 471  Q
    ||||||    
T  5370191 tagctt 5370196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 347 - 450
Target Start/End: Original strand, 6542169 - 6542272
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    ||||||||||||||| | | |||||||||||||  |||||||| |||| |||||||||||||||||||||||||||| || |||||||||||||||||||    
T  6542169 acaccaagaaatgtttacccagttcggtccaact-tgacctaccctgggggagagattgatctctccaatccactatcaacgagttcttacaaagagata 6542267  T
Q  446 caaaa 450  Q
    |||||    
T  6542268 caaaa 6542272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 358 - 468
Target Start/End: Original strand, 31495316 - 31495428
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| ||||||||||||||  |||    
T  31495316 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatcaactatcaatgagttcttacaaaagagatacaaaaagagt 31495415  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  31495416 tacaagaaattag 31495428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 350 - 477
Target Start/End: Original strand, 37229714 - 37229841
Alignment:
Q  350 ccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaa 448  Q
    |||||||||||| | |||||||||||||||  ||||||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  37229714 ccaagaaatgtttacctagttcggtccaact-tgacctactatgagggagagattgatctctccaatccactataaatgagttcttacaaagagatataa 37229812  T
Q  449 aattagttacaagaaattagcttcaacaa 477  Q
    ||   ||||||| ||||| |||| |||||    
T  37229813 aaagggttacaacaaatttgctttaacaa 37229841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 5429837 - 5429728
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  | ||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||  ||||||||||||    
T  5429837 agttcggtccaact-taacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaatagatac-aaatgggttacaagaaat 5429740  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  5429739 tagcttcaacaa 5429728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 36463399 - 36463508
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||| | || |||||||||||||||||||| ||||  ||||||||||||    
T  36463399 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactgtcaaagagttcttacaaagagatac-aaatgggttacaagaaat 36463496  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  36463497 tagcttcaacaa 36463508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 46147401 - 46147510
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| |||||||||||| ||||||||||||||| || |||||||||||||||||||| |||| |||||||||||||    
T  46147401 agttcggtccaact-tgacctaatttgggggagagattgatgtctccaatccactatcaaagagttcttacaaagagatac-aaatgagttacaagaaat 46147498  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  46147499 tagcttcaacaa 46147510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 346 - 477
Target Start/End: Original strand, 22882740 - 22882870
Alignment:
Q  346 aacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagttc-ttacaaagaga 443  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| |  || ||||||||| |||| |||||||||  ||||||||| |||| ||||||    
T  22882740 aacaccaagaaatgtttatccagttcggtccaacaatgacctactccg--ggggagattgatttctctaatccactaccaatgagttctttacgaagaga 22882837  T
Q  444 tacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||   ||||||||||||||||||||||||    
T  22882838 tacaaaa-gggttacaagaaattagcttcaacaa 22882870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 346 - 477
Target Start/End: Original strand, 22934404 - 22934534
Alignment:
Q  346 aacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagttc-ttacaaagaga 443  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| |  || ||||||||| |||| |||||||||  ||||||||| |||| ||||||    
T  22934404 aacaccaagaaatgtttatccagttcggtccaacaatgacctactccg--ggggagattgatttctctaatccactaccaatgagttctttacgaagaga 22934501  T
Q  444 tacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||   ||||||||||||||||||||||||    
T  22934502 tacaaaa-gggttacaagaaattagcttcaacaa 22934534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 384 - 477
Target Start/End: Original strand, 34570440 - 34570533
Alignment:
Q  384 acctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |  ||||||||||||||||||||||||    
T  34570440 acctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aattgggttacaagaaattagcttcaacaa 34570533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 12743935 - 12744038
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  12743935 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 12744032  T
Q  466 tagctt 471  Q
    ||||||    
T  12744033 tagctt 12744038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 12745324 - 12745427
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  12745324 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 12745421  T
Q  466 tagctt 471  Q
    ||||||    
T  12745422 tagctt 12745427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 347 - 471
Target Start/End: Original strand, 52095352 - 52095475
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    ||||||| || |||||| | ||||||||||||   || ||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||    
T  52095352 acaccaaaaattgttcacccagttcggtccaaacttg-cctactctggaggagagattgatctctccaatccactatcaaagatttcttacaaagagata 52095450  T
Q  446 caaaattagttacaagaaattagctt 471  Q
    | ||||  ||||||||||||||||||    
T  52095451 c-aaatgggttacaagaaattagctt 52095475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 47038421 - 47038529
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  |||| |||||||| |||||||||||||||||||||||||||| ||||||| |||||||| |||||||||  |  |||||||||||    
T  47038421 agttcggtccaact-tgacttactctgggggagagattgatctctccaatccactatcaatgagtccttacaaacagatacaaa--tgattacaagaaat 47038517  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  47038518 tagcttcaacaa 47038529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 347 - 477
Target Start/End: Complemental strand, 4588137 - 4588008
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    |||||| |||||||| | | |||| ||||||||  | ||||| | ||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  4588137 acaccatgaaatgtttacccagtttggtccaact-tcacctattatgggggagagattgttctctccaatccactatcaatgagttcttacaaagagata 4588039  T
Q  446 caaaattagttacaagaaattagcttcaacaa 477  Q
    |||||   ||||||||||||||||||||||||    
T  4588038 caaaa-gggttacaagaaattagcttcaacaa 4588008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 36994682 - 36994573
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||| ||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||    
T  36994682 agttcggtccaact-tgatctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaat 36994585  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  36994584 tagcttcaacaa 36994573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 54881679 - 54881561
Alignment:
Q  144 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 243  Q
    ||||||||||||||  |||| | ||||| |||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||  |||   ||||||    
T  54881679 tgttgtgaattcgg--tcaattccaaacttcacatcaatgaaatttatattcgtggagcaagtatcaatgacaaccaacaaccaaa-ataa---accaca 54881586  T
Q  244 agcaataacaacaatctagatctag 268  Q
    ||||||||||||||| |||| ||||    
T  54881585 agcaataacaacaatatagacctag 54881561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 12739560 - 12739663
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |||||| |||||| ||||  ||||||||||||    
T  12739560 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcatacaaatagatac-aaatgggttacaagaaat 12739657  T
Q  466 tagctt 471  Q
    ||||||    
T  12739658 tagctt 12739663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 382 - 477
Target Start/End: Original strand, 54199930 - 54200025
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| ||||| ||||||| ||||||||| ||| |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  54199930 tgacctaatctgggggagagaatgatctctctaattcactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaa 54200025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 396 - 477
Target Start/End: Complemental strand, 3913578 - 3913497
Alignment:
Q  396 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||  |||| |||||||||||||||||||    
T  3913578 ggagagattgatctctccaatccactatcaatgagttcttacaaagatatac-aaatgggttaaaagaaattagcttcaacaa 3913497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 8393562 - 8393448
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 454  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  8393562 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 8393465  T
Q  455 ttacaagaaattagctt 471  Q
    |||||||||||||||||    
T  8393464 ttacaagaaattagctt 8393448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 8395771 - 8395657
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 454  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  8395771 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 8395674  T
Q  455 ttacaagaaattagctt 471  Q
    |||||||||||||||||    
T  8395673 ttacaagaaattagctt 8395657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 398 - 471
Target Start/End: Original strand, 12744087 - 12744160
Alignment:
Q  398 agagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 471  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  12744087 agagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagctt 12744160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 24969238 - 24969161
Alignment:
Q  400 agattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||| | |||||||||||||||||||||||||    
T  24969238 agatttatctctccaatccactatcaattagttcttacaaagagatacaaa-tgagttacaagaaattagcttcaacaa 24969161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 45687192 - 45687295
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  |||| || | |||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||| ||||| |||||||    
T  45687192 agttcggtccaact-tgacataatatggaggagagatagatctctccaatccactatcaatgagttcttacaaatagatac-aaatgagttataagaaat 45687289  T
Q  466 tagctt 471  Q
    ||||||    
T  45687290 tagctt 45687295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 398 - 468
Target Start/End: Original strand, 12745476 - 12745546
Alignment:
Q  398 agagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattag 468  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||    
T  12745476 agagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattag 12745546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 174 - 321
Target Start/End: Complemental strand, 41961746 - 41961603
Alignment:
Q  174 cacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaaca-atctagatctagtcta 272  Q
    ||||||||||||||||||||  |||| ||||||||||||| |||||||||||||||   |||  || |||||||| ||||| | ||||||||||| ||||    
T  41961746 cacatcaatgaaatttagatctgtggggcaagtatcaatgacaaccaataaccaaa---aaa--actacaagcaacaacaatagatctagatctaatcta 41961652  T
Q  273 gaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 321  Q
    | || || ||  | || |||||||||||| |||||||| ||||||||||    
T  41961651 gtaaccaggtttaaagcaaaaccacaatcaaaccaaagaataaacaaga 41961603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 396 - 471
Target Start/End: Original strand, 12747794 - 12747869
Alignment:
Q  396 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 471  Q
    |||||||||||||||||||||||||||| ||||||||| |||||| |||||| ||||  ||||||||||||||||||    
T  12747794 ggagagattgatctctccaatccactatcaatgagttcatacaaatagatac-aaatgggttacaagaaattagctt 12747869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 449
Target Start/End: Original strand, 13009468 - 13009536
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaa 449  Q
    ||||||| | |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||    
T  13009468 tgacctaatttggaggagagatcgatctctccaatccactatcaatgagttcttacaaagggatacaaa 13009536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 29254652 - 29254543
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | |||  ||||||||||||||||||||||||||| || ||||||||||||||||| || ||||  ||| ||||||||    
T  29254652 agttcggtccaact-tgacctaatttgggagagagattgatctctccaatccactatcaacgagttcttacaaagagacac-aaatgggttgcaagaaat 29254555  T
Q  466 tagcttcaacaa 477  Q
    || |||||||||    
T  29254554 taacttcaacaa 29254543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 52467364 - 52467473
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| ||  |||| |||||||| ||||| ||||  ||||||||| ||    
T  52467364 agttcggtccaact-tgacctaatctcggggagagattgatctctccaatccactatcaaaaagttattacaaagtgatac-aaatgggttacaagatat 52467461  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  52467462 tagcttcaacaa 52467473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 450
Target Start/End: Original strand, 21703829 - 21703929
Alignment:
Q  351 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaa 448  Q
    ||||||||||| | | ||||||||| |||||||||||||| ||| ||| |||||||| ||||||||||||| | ||||||||| ||||||| ||||||||    
T  21703829 caagaaatgtttacccagttcggtcaaacaatgacctactatgg-ggatagattgatatctccaatccactgtcaatgagttctttacaaaaagatacaa 21703927  T
Q  449 aa 450  Q
    ||    
T  21703928 aa 21703929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 5207866 - 5207930
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    |||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||| |||||    
T  5207866 tgacctactctgggagagagattgatctttccaatccactatcaatgagttcttacaaatagata 5207930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 382 - 477
Target Start/End: Complemental strand, 5871964 - 5871869
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| ||||| ||||||||||||||||| |||||||||| || |||||||| ||||| |||| |||||  ||||||||||||| |||| |||||    
T  5871964 tgacctaatctgggggagagattgatctctctaatccactatcaaagagttcttgcaaagtgata-aaaatgggttacaagaaatttgcttaaacaa 5871869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 347 - 450
Target Start/End: Complemental strand, 51337242 - 51337139
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    |||||| |||||||| | | |||||||||||||  ||||||| | ||  ||||||||||||||||| ||| |||||| |||||||||||| |||||||||    
T  51337242 acaccacgaaatgtttacccagttcggtccaact-tgacctaatgtgtgggagagattgatctctctaatacactatcaatgagttcttaaaaagagata 51337144  T
Q  446 caaaa 450  Q
    |||||    
T  51337143 caaaa 51337139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 477
Target Start/End: Complemental strand, 34112973 - 34112866
Alignment:
Q  369 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaatt 466  Q
    |||||||||||||||||||||| | | |||||||  |||||||||| | |||||| ||||||||| |||||||||||| |||||   |||||| ||||||    
T  34112973 ttcggtccaacaatgacctactataggggagaga--gatctctccacttcactatcaatgagttctttacaaagagatgcaaaa-gggttacatgaaatt 34112877  T
Q  467 agcttcaacaa 477  Q
    |||||||||||    
T  34112876 agcttcaacaa 34112866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 477
Target Start/End: Complemental strand, 21688437 - 21688298
Alignment:
Q  338 aagataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctta 435  Q
    ||||||||||||||||||||| ||| |   | ||||||| |||  ||||||| ||| | |||| |||||||||||||||| || ||| |||||||||||     
T  21688437 aagataacaacaccaagaaattgttgactcaattcggtctaact-tgacctaatctaggggagggattgatctctccaattcattatcaatgagttcttc 21688339  T
Q  436 caaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    | ||||||||| |||| |||||||| ||||||| ||||||||    
T  21688338 cgaagagatac-aaatgagttacaaaaaattagtttcaacaa 21688298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 38811162 - 38811235
Alignment:
Q  330 gtagagaaaagataacaacacc-aagaaatgttcatctagttcggtccaacaatgacctactctggaggagaga 402  Q
    |||||||||||| ||||||||| ||||| |||| | | |||||||||||||||||||||||||| | |||||||    
T  38811162 gtagagaaaagagaacaacaccgaagaattgtttacccagttcggtccaacaatgacctactcttggggagaga 38811235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 382 - 434
Target Start/End: Complemental strand, 7125046 - 7124992
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  7125046 tgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 7124992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 301
Target Start/End: Complemental strand, 21688572 - 21688470
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    |||||||||||||||||| ||| ||| ||| |||| | ||   |||||||||| ||||| ||| ||||||||||||| ||| ||| ||||||  ||||||    
T  21688572 gtggagcaagtatcaatgacaatcaacaactaaatattaa---ccacaagcaacaacaataatatagatctagtctataaatcaaatgcataacaaaacc 21688476  T
Q  296 acaatc 301  Q
    ||||||    
T  21688475 acaatc 21688470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 5136224 - 5136155
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  5136224 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 5136155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 5138449 - 5138380
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  5138449 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 5138380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 473
Target Start/End: Original strand, 44967818 - 44967944
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgag-ttcttacaaagagat 444  Q
    |||| |||||||||| | | || ||||||||||| |||| || ||||| ||||||||||||| ||| |||| ||| | || ||| || ||||||||||||    
T  44967818 acacaaagaaatgtttacccaggtcggtccaacagtgacttattctgggggagagattgatccctctaatctactctcaacgagttttttacaaagagat 44967917  T
Q  445 acaaaattagttacaagaaattagcttca 473  Q
    |||||  | ||||||||||||| ||||||    
T  44967918 acaaa--tggttacaagaaattggcttca 44967944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 6719842 - 6719771
Alignment:
Q  240 cacaagcaataacaaca-atctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaag 310  Q
    |||| |||| ||||||| ||||||||||| |||||||| |||||||| || |||||||||||  ||||||||    
T  6719842 cacaggcaaaaacaacagatctagatctaatctagaaaccaagtgcaaagcaaaaccacaataaaaccaaag 6719771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 434
Target Start/End: Complemental strand, 7122827 - 7122773
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||| ||||||||||||||  ||||||||||||||||  |||||||||||    
T  7122827 tgacctactatggaggagagattgtactctccaatccactatcaaatgagttctt 7122773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 322
Target Start/End: Complemental strand, 32091719 - 32091645
Alignment:
Q  247 aataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagat 322  Q
    |||||||||||| |||||||| ||||| ||||||||| | || |||||||||||  ||| |||| |||||||||||    
T  32091719 aataacaacaatttagatctaatctagcaaacaagtgtaaag-aaaaccacaattgaactaaagaataaacaagat 32091645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 33090223 - 33090164
Alignment:
Q  167 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataacc 226  Q
    |||| |||||||||||||||||| |||| |||| | ||||||||||| ||| ||||||||    
T  33090223 caaatctcacatcaatgaaattttgatttgtgggggaagtatcaatgacaatcaataacc 33090164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 27416789 - 27416844
Alignment:
Q  142 tatgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtgg 199  Q
    ||||||||||||||||  |||| | ||||| |||||||||| ||||||||||||||||    
T  27416789 tatgttgtgaattcgg--tcaattccaaacttcacatcaataaaatttagattcgtgg 27416844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 44570432 - 44570485
Alignment:
Q  424 aatgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||| ||||||||    
T  44570432 aatgagttctttacaaagagatacaaaaat-gttacaagaaattagtttcaacaa 44570485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 445
Target Start/End: Original strand, 35369440 - 35369534
Alignment:
Q  351 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagata 445  Q
    ||||||||||| | || ||| ||||||||||||||||||| ||  |||||||| || |||| |||| ||| || ||||||||| |||||||||||||    
T  35369440 caagaaatgtttaccttgtttggtccaacaatgacctactatg--ggagagatcgacctcttcaattcaccatcaatgagttctttacaaagagata 35369534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 38811016 - 38811069
Alignment:
Q  165 ttcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaac 218  Q
    |||||| |||| | |||||||||||||||||| || ||||||||||||| ||||    
T  38811016 ttcaaatctcaaaccaatgaaatttagattcgcggggcaagtatcaatgacaac 38811069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 477
Target Start/End: Complemental strand, 6677597 - 6677518
Alignment:
Q  399 gagattgatctctccaatccactat-aatgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||| |||||| ||| || || ||||| ||||||| ||||||||   ||||||||||||||||||||||||    
T  6677597 gagattgatctctcaaatccattatcaaagacttctttacaaagatatacaaaagg-gttacaagaaattagcttcaacaa 6677518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 477
Target Start/End: Complemental strand, 32091570 - 32091527
Alignment:
Q  433 ttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||    
T  32091570 ttacaaagagatacaaaag-agttacaagaaattagtttcaacaa 32091527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 477
Target Start/End: Original strand, 34788851 - 34788894
Alignment:
Q  433 ttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||    
T  34788851 ttacaaagagatacaaaag-agttacaagaaattaacttcaacaa 34788894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 473
Target Start/End: Original strand, 37754949 - 37755076
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgag-ttcttacaaagagat 444  Q
    |||| ||||||| || ||| ||||  ||| |||||| ||||||| ||| |||||||||||||||| ||| ||| ||| |||||| || ||| ||||||||    
T  37754949 acactaagaaatatttatccagtttagtctaacaattacctactatgggggagagattgatctcttcaaaccattatcaatgagttttttagaaagagat 37755048  T
Q  445 acaaaattagttacaagaaattagcttca 473  Q
    | ||||   |||||||||||||| |||||    
T  37755049 a-aaaaaaggttacaagaaattatcttca 37755076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 218; Significance: 1e-119; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 144 - 448
Target Start/End: Complemental strand, 28242688 - 28242382
Alignment:
Q  144 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 242  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |    
T  28242688 tgttgtgaattcggtctcaaattccaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatgacaaccaataaccaaatgtaaataacctc 28242589  T
Q  243 aagcaataacaacaatctagatctagtctagaaaacaagtgcatag-aaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaaga 341  Q
    |||||| |||||||||||||||||| | |||||| |||||| |||| ||||||||||||||||| ||| ||||||||||||       ||||||||||||    
T  28242588 aagcaacaacaacaatctagatctaatttagaaaccaagtgaatagcaaaaaccacaatctaacaaaatgataaacaagataaagagagtagagaaaaga 28242489  T
Q  342 taacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaaaga 441  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28242488 taacaacaccaagaaatgttcacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaaaga 28242389  T
Q  442 gatacaa 448  Q
    |||||||    
T  28242388 gatacaa 28242382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 165 - 477
Target Start/End: Complemental strand, 47115533 - 47115220
Alignment:
Q  165 ttcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagat 264  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||| ||| ||| || ||||||||||| | |||||||||||||||||||||||||    
T  47115533 ttcaaaactcacatcaataaaatttagattcgtggagcaagtatcaatgacaatcaacaatcaaatgtaaataatcacaagcaataacaacaatctagat 47115434  T
Q  265 ctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcat 364  Q
    ||| |||||||||||||||||||  |||||||||||||||| ||||||||||||||||       | |||||||||||||||||| |||||||||||||     
T  47115433 ctaatctagaaaacaagtgcataacaaaaccacaatctaacaaaaggataaacaagataaaaagagcagagaaaagataacaacatcaagaaatgttcac 47115334  T
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 463  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||||||  ||||||||||    
T  47115333 ccagttcggtccaacaatgacctactctggagcagagattgatctctccaatccactatcaatgggtttttacaaagagatacaaaatgggttacaagaa 47115234  T
Q  464 attagcttcaacaa 477  Q
    |||||||| |||||    
T  47115233 attagcttaaacaa 47115220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 144 - 477
Target Start/End: Complemental strand, 37168678 - 37168346
Alignment:
Q  144 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 242  Q
    |||||||||||||  ||||||||| ||| ||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| |    
T  37168678 tgttgtgaattcgatctcaaattccaaatctcgcatcaatgaaatttagattcgtagagcaagtatcaatgacaaccaataaccaaatgtaaataacctc 37168579  T
Q  243 aagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagat 342  Q
    |||||| |||||  || |||| ||||||||  || ||||||||||| |||||||||||| |||||| | |||||||||||       ||| |||||||||    
T  37168578 aagcaacaacaa-tatatagacctagtcta-taatcaagtgcatagcaaaaccacaatcaaaccaaggaataaacaagataaagagagtaaagaaaagat 37168481  T
Q  343 aacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaaga 441  Q
    ||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37168480 aacaacaccaagaaatgttcacccagttcggtccaac-ttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaaga 37168382  T
Q  442 gatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||  |||||||||||||||||| |||||    
T  37168381 gatacaaaatgggttacaagaaattagcttaaacaa 37168346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 144 - 477
Target Start/End: Original strand, 31925498 - 31925826
Alignment:
Q  144 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 243  Q
    |||||||||||||| || || | ||||| |||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||||||     | ||||||    
T  31925498 tgttgtgaattcggtctgaattccaaacttcacattaatgaaatttagattcgtagagcaagtatcaatgacaaccaacaaccaaat-----taaccaca 31925592  T
Q  244 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataa-acaagatnnnnnnngtagagaaaagat 342  Q
    ||||||||||| ||| |||| |||||||| ||| ||||||||||| |||||||||||| |||||||| |||| |||||||       ||| |||||| ||    
T  31925593 agcaataacaataatatagacctagtctataaaccaagtgcatagcaaaaccacaatccaaccaaagaataatacaagataacgagagtaaagaaaaaat 31925692  T
Q  343 aacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaaga 441  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31925693 aacaacaccaagaaatgttcacctagttcggtccaac-ttgacctactctagaggagagattgatctctccaatccactatcaatgagttcttacaaaga 31925791  T
Q  442 gatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||| ||||  ||||||||||||||||||||||||    
T  31925792 gatac-aaatgggttacaagaaattagcttcaacaa 31925826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 37032907 - 37033192
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |    
T  37032907 gtggagcaaatatcaatggcaaccaataaccaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaatc 37033006  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaa--agataacaacaccaaga-aatgttcatctagttcggtccaacaatgacctactct 392  Q
    ||| |||||||||||||||||||||||       |||||||||  ||| |||||||| || | | |||||| | ||||||||||||| |||||||||| |    
T  37033007 acactctaaccaaaggataaacaagataaagagagtagagaaaatagacaacaacacgaatagattgttcacccagttcggtccaaccatgacctactat 37033106  T
Q  393 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||| ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||   |||||||||||||||||||||||    
T  37033107 ggagaagagattaatctctccaatccactatcaatgagttcttacaaagagatgcaaaatggattacaagaaattagcttcaacaa 37033192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 142 - 477
Target Start/End: Original strand, 7482009 - 7482350
Alignment:
Q  142 tatgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataacca----aatgtaaat 236  Q
    |||| |||||||||||  |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||    |||||||||    
T  7482009 tatggtgtgaattcggtatcaaattccaaacctcacatcaataaaatttaaattcgtggagcaagtatcaatgacaaccaataaccaaattaatgtaaat 7482108  T
Q  237 taccacaagcaataacaaca--atctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtaga 334  Q
     ||| ||||||| |||||||  || |||| ||||||||  || ||||||||||| |||||||||||| |||||| | |||||||||||       ||| |    
T  7482109 aacctcaagcaacaacaacaatatatagacctagtcta-taatcaagtgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaa 7482207  T
Q  335 gaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttct 433  Q
    |||||||| |||| |||| |||||||||| |||||||||||||||  |||||||||||| |||||||||||||||||||||| |||||| ||||||||||    
T  7482208 gaaaagatgacaataccatgaaatgttcacctagttcggtccaac-ttgacctactctgaaggagagattgatctctccaattcactatcaatgagttct 7482306  T
Q  434 tacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||||  |||||||||||||||||| |||||    
T  7482307 tacaaagagatacaaaatgggttacaagaaattagcttaaacaa 7482350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 47255179 - 47255459
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    |||||||| ||||||||||||||||| ||||||| |||||   ||| |||||| ||||| ||| |||| |||||||| ||| ||||||||||| ||||||    
T  47255179 gtggagcaggtatcaatggcaaccaacaaccaaa-gtaaa---ccataagcaacaacaataatatagacctagtctataaaccaagtgcatagcaaaacc 47255274  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngta---gagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactct 392  Q
    |||||||||||||||||||||||||||       |||   || |||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  47255275 acaatctaaccaaaggataaacaagataaagagagtaaaagaaaaaaaataacaacaccaagaaatgttcacccagttcggtccaacaatgacctactct 47255374  T
Q  393 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  47255375 ggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaa 47255459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 196 - 477
Target Start/End: Complemental strand, 29136577 - 29136296
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    |||||||||||| ||||| |||||||||||||||| ||| | ||||||||||||||||||||  |||| |||||||| ||| ||||||||||| ||||||    
T  29136577 gtggagcaagtaccaatgacaaccaataaccaaatataactaaccacaagcaataacaacaaaatagacctagtctataaaccaagtgcatagcaaaacc 29136478  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata-acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 394  Q
    |||||||||||||||||||||||||||       |||||||||| ||| ||| |||||||||||||||| ||||||||||||||   |||||||||||||    
T  29136477 acaatctaaccaaaggataaacaagataaagagagtagagaaaa-atagacagcaccaagaaatgttcacctagttcggtccaaacttgacctactctgg 29136379  T
Q  395 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| |||| ||||  ||| ||||||||||||||||||||    
T  29136378 aggagagattgatctctccaatccacgatcaatgagttcttacaaagaaatac-aaatgggttccaagaaattagcttcaacaa 29136296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 196 - 449
Target Start/End: Original strand, 37876604 - 37876858
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaac 294  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| | |||| |||||||| ||| |||||||||||||||||    
T  37876604 gtggagcaagtatcaatggcaaccaataaccaaatgtaaataaaccacaagcaaaaacaacactatagacctagtctataaaccaagtgcatagaaaaac 37876703  T
Q  295 cacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 394  Q
    ||||||  ||||||| ||||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||| ||||  |||  ||||||||    
T  37876704 cacaattcaaccaaatgataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggttcaac-ttgatgtactctgg 37876802  T
Q  395 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaa 449  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  37876803 aggagagattgatctctgcaatccactatcaatgagttattacaaagagatacaaa 37876858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 196 - 477
Target Start/End: Complemental strand, 11349030 - 11348747
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    |||||||||||||||||| |||  ||||| ||||||||||| ||||||||||||||||||||| |||| |||||||| ||| ||||||||||| ||||||    
T  11349030 gtggagcaagtatcaatgacaattaataatcaaatgtaaataaccacaagcaataacaacaatatagacctagtctataaaccaagtgcatagcaaaacc 11348931  T
Q  296 acaatctaaccaaagga-taaacaagatnnnnnnng--tagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactct 392  Q
    |||||| ||   ||||| ||||||||||       |  || |||||||||||||||| |||||||||||||   |||||||||||||  |||||||||||    
T  11348930 acaatccaaagcaaggaataaacaagataaagagagagtaaagaaaagataacaacatcaagaaatgttcactcagttcggtccaact-tgacctactct 11348832  T
Q  393 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||||||||||||||||    
T  11348831 ggaggagagattgatctctccaatccactatcaatgagttcttagaaagagatac-aaatgggttacaagaaattagcttcaacaa 11348747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 196 - 449
Target Start/End: Original strand, 13548842 - 13549092
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaa-gtgcatagaaaaac 294  Q
    |||||||||||||||||| ||||||| ||||||| |||||   |||||||||| ||||| ||| |||| |||||||| ||| ||| |||||||| |||||    
T  13548842 gtggagcaagtatcaatgacaaccaacaaccaaa-gtaaa---ccacaagcaacaacaataatatagacctagtctataaaccaaagtgcatagcaaaac 13548937  T
Q  295 cacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 394  Q
    ||||||| |||||||| |||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||  |||||||||||||    
T  13548938 cacaatccaaccaaagaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctgg 13549036  T
Q  395 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaa 449  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13549037 aggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaa 13549092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 13546935 - 13547208
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatcta--gtctagaaaacaagtgcatagaaaaa 293  Q
    |||||||||||||||||||||||||| ||||||| |||||   |||||||||| ||||| ||| |||| |||  || || ||| ||||||||     |||    
T  13546935 gtggagcaagtatcaatggcaaccaacaaccaaa-gtaaa---ccacaagcaacaacaataatatagacctatagtttataaaccaagtgca-----aaa 13547025  T
Q  294 ccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctg 393  Q
    |||||||| |||||||| |||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||  ||||||||||||    
T  13547026 ccacaatccaaccaaagaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctg 13547124  T
Q  394 gaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||| ||||||||||||    
T  13547125 gaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaaatagcttcaacaa 13547208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 42297815 - 42298094
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    |||||| ||||||||||||||||||| ||||||||     | |||| |||||||||||| ||| || | | |||||| ||| ||||||||||| |||| |    
T  42297815 gtggagaaagtatcaatggcaaccaacaaccaaat-----taaccataagcaataacaataatatataccaagtctataaaccaagtgcatagcaaaatc 42297909  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa---gataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactc 391  Q
    |||||| |||||||  |||||||||||       ||| ||||||   || ||||||||||||| || ||||| | ||||||||||||| |||||||||||    
T  42297910 acaatccaaccaaataataaacaagataaaaga-gtaaagaaaaatagacaacaacaccaagagattgttcacccagttcggtccaaccatgacctactc 42298008  T
Q  392 tggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  42298009 tggaggagagattgatctcttcaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaacaa 42298094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 175 - 477
Target Start/End: Complemental strand, 34603914 - 34603625
Alignment:
Q  175 acatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatcta--gatctagtcta 272  Q
    ||||||||||||| |||||| |||||||||||||||||| |||||||||| ||||||||||| ||| ||||||  |||| |||| ||  || ||||||||    
T  34603914 acatcaatgaaatctagatttgtggagcaagtatcaatgacaaccaataatcaaatgtaaataacctcaagcaccaacagcaatatatagacctagtcta 34603815  T
Q  273 gaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcg 372  Q
     ||  ||||||||||| |||||||||||| |||||| | |||||||||||       ||| ||||||||||||||||||              |||||||    
T  34603814 taat-caagtgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaagaaaagataacaacacc--------------tagttcg 34603730  T
Q  373 gtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 471  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||| |||||  ||||||||||||||||||    
T  34603729 gtccaact-tgacctactctggaggagagattgatctcttcaatccaccatcaatgagttcttacaaagagataaaaaatgggttacaagaaattagctt 34603631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 172 - 477
Target Start/End: Complemental strand, 6808799 - 6808501
Alignment:
Q  172 ctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtct 271  Q
    ||||||||||||||||||| |||  |||   |||||||||||||| ||||||||||||     || || |||||   ||||||||||||||||||  |||    
T  6808799 ctcacatcaatgaaatttaaatttatgggataagtatcaatggcagccaataaccaaa-----ataactacaag---taacaacaatctagatctgatct 6808708  T
Q  272 agaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttc 371  Q
    ||||| |||||| | || |||| ||| ||| ||| |||| |||||||||||       ||||| || | | |||||| ||||||||| || |||||||||    
T  6808707 agaaaccaagtgtaaagcaaaatcactatcaaactaaagcataaacaagataaagagagtagaaaacaaagaacaactccaagaaatatttatctagttc 6808608  T
Q  372 ggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaattagc 469  Q
    || |||||||| ||||||||||  | |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  ||||||||||| |||||    
T  6808607 ggaccaacaataacctactctgaggaagagattgatctctccaatccactataaatgagttctttacaaagagatacaaaa-gagttacaagaagttagc 6808509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 477
Target Start/End: Complemental strand, 193799 - 193660
Alignment:
Q  338 aagataac-aacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctta 435  Q
    |||||||| |||||||||||||||||| | |||||||||||||  |||| |||||||||| |||||||||||||||||||||||||| |||||||| |||    
T  193799 aagataacgaacaccaagaaatgttcacccagttcggtccaact-tgacatactctggagaagagattgatctctccaatccactatcaatgagttatta 193701  T
Q  436 caaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  193700 caaagagatac-aaatgagttacaagaaattagcttcaacaa 193660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 142 - 297
Target Start/End: Complemental strand, 194901 - 194750
Alignment:
Q  142 tatgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattacca 241  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||| ||||   ||||    
T  194901 tatgttgtgaattcggactcaaatcgaaacctcacatcaatgaaatttagattcacggagcaagtatcaatggcaaccaacaaccaaa-gtaa---acca 194806  T
Q  242 caagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccac 297  Q
    ||||||| ||||| ||| |||| |||||||| ||| ||||||||||  ||||||||    
T  194805 caagcaacaacaataatatagacctagtctataaaccaagtgcatatcaaaaccac 194750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 282 - 477
Target Start/End: Complemental strand, 19754737 - 19754544
Alignment:
Q  282 tgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaa 381  Q
    ||||||| |||||||||||| ||| ||||||||||||||||       ||| ||||||||||||| |||||| || |||| | | | |||||||||||      
T  19754737 tgcatagcaaaaccacaatccaacaaaaggataaacaagataaagagagtaaagaaaagataaca-caccaaaaattgttgacccacttcggtccaact- 19754640  T
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| ||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  19754639 tgacctaatctgagggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatcggttacaagaaattagcttcaacaa 19754544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 358 - 477
Target Start/End: Original strand, 8550787 - 8550906
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||    
T  8550787 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgagtt 8550885  T
Q  457 acaagaaattagcttcaacaa 477  Q
    ||||||||||||||| |||||    
T  8550886 acaagaaattagcttaaacaa 8550906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 358 - 477
Target Start/End: Complemental strand, 3189498 - 3189379
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||    
T  3189498 tgttcacccagttcggtccaaacttgacctactctggatgagagattgatctctccaatccactatcaatgagttcttacaaaaagatacaaaa-gagtt 3189400  T
Q  457 acaagaaattagcttcaacaa 477  Q
    ||| |||||||||||||||||    
T  3189399 acaggaaattagcttcaacaa 3189379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 358 - 477
Target Start/End: Complemental strand, 3198315 - 3198196
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||    
T  3198315 tgttcacccagttcggtccaaacttgacctactctggatgagagattgatctctccaatccactatcaatgagttcttacaaaaagatacaaaa-gagtt 3198217  T
Q  457 acaagaaattagcttcaacaa 477  Q
    ||| |||||||||||||||||    
T  3198216 acaggaaattagcttcaacaa 3198196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 358 - 477
Target Start/End: Complemental strand, 3207154 - 3207035
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||    
T  3207154 tgttcacccagttcggtccaaacttgacctactctggatgagagattgatctctccaatccactatcaatgagttcttacaaaaagatacaaaa-gagtt 3207056  T
Q  457 acaagaaattagcttcaacaa 477  Q
    ||| |||||||||||||||||    
T  3207055 acaggaaattagcttcaacaa 3207035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 276 - 477
Target Start/End: Complemental strand, 19752932 - 19752735
Alignment:
Q  276 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtc 375  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||||||       ||| | |||||||||||   | ||  | |||| | |||||||||||    
T  19752932 aacaagtgcatagtaaaaccacaatccaacaaaaggataaacaagataaagagagtaaataaaagataaca---caaaagattgttgacctagttcggtc 19752836  T
Q  376 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 474  Q
    ||||  ||||||| | |||  |||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  19752835 caact-tgacctaatatgggagagagattgatctctccaatcctctatcaatgagttcttacaaagagatac-aaatcggttacaagaaattagcttcaa 19752738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 28220236 - 28220345
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  28220236 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 28220333  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  28220334 tagcttcaacaa 28220345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 382 - 475
Target Start/End: Complemental strand, 46065062 - 46064969
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaac 475  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| | || |||||||||||||||||||||||    
T  46065062 tgacctactctgggggagagattgatctctccaatccactatgaatgagttcttacaaagagatac-acatgagttacaagaaattagcttcaac 46064969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 343 - 477
Target Start/End: Complemental strand, 22079501 - 22079365
Alignment:
Q  343 aacaacaccaa-gaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaa 439  Q
    ||||||||||| |||||||| | | |||| |||||| |||||||||||| ||||||||| |||||||||||||||||| ||| ||||||||| |||||||    
T  22079501 aacaacaccaaagaaatgtttaccaagtttggtccagcaatgacctactttggaggagaaattgatctctccaatccaatatcaatgagttctttacaaa 22079402  T
Q  440 gagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||| | |||||||||||||||||| |||||    
T  22079401 gagatacaaaa-tggttacaagaaattagctttaacaa 22079365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 365 - 477
Target Start/End: Complemental strand, 49918510 - 49918399
Alignment:
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 463  Q
    |||||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||    
T  49918510 ctagttcggtccaact-tgacctaatttgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaa 49918413  T
Q  464 attagcttcaacaa 477  Q
    ||||||||||||||    
T  49918412 attagcttcaacaa 49918399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 3157023 - 3156914
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  3157023 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 3156926  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  3156925 tagcttcaacaa 3156914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 365 - 471
Target Start/End: Complemental strand, 20762833 - 20762727
Alignment:
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 463  Q
    ||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||   ||||||||||    
T  20762833 ctagttcggtccaaacttgacctactctgtaggagagattgatctctccaatccactatcaatgagttcttacgaagagatacaaaa-gggttacaagaa 20762735  T
Q  464 attagctt 471  Q
    ||||||||    
T  20762734 attagctt 20762727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 28223431 - 28223540
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  28223431 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 28223528  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  28223529 tagcttcaacaa 28223540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 28265564 - 28265673
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||||    
T  28265564 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaaagagttcttacaaagagatac-aaatgggttacaagaaat 28265661  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  28265662 tagcttcaacaa 28265673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 167 - 477
Target Start/End: Original strand, 12318336 - 12318642
Alignment:
Q  167 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaaca-atctagatc 265  Q
    |||| |||||||||||||||||| ||| | ||| |||||||||||||||||||||||||||     |||| | |||| |||| ||||||| ||||||||     
T  12318336 caaatctcacatcaatgaaatttggatgcatggggcaagtatcaatggcaaccaataacca-----aaataagcacacgcaacaacaacagatctagatt 12318430  T
Q  266 tagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaa-tgttcat 364  Q
    ||  |||| || ||| || | || |||| || |||  |||||||| |||||||||||       ||| |||||||| ||||||||||| ||| |||| |     
T  12318431 taacctagcaaccaattgtaaagcaaaatcataattgaaccaaagaataaacaagataaagggagtaaagaaaagagaacaacaccaaaaaattgtttac 12318530  T
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttaca-aagagatacaaaattagttacaaga 462  Q
    |||||||||||||| ||||| ||||| ||| |||||||  ||||||||   | || ||| |||||||||||| | |||| |||||||| | |||||||||    
T  12318531 ctagttcggtccaataatgaactactatgggggagaga--gatctctctgcttcagtatcaatgagttcttaaagaagacatacaaaa-tggttacaaga 12318627  T
Q  463 aattagcttcaacaa 477  Q
    |||||||||||||||    
T  12318628 aattagcttcaacaa 12318642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 13316352 - 13316465
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   |||    
T  13316352 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaa-gggtt 13316450  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  13316451 acaagaaattagctt 13316465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 382 - 474
Target Start/End: Complemental strand, 1833666 - 1833574
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 474  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  1833666 tgacctaatctggtggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaatttagcttcaa 1833574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 351 - 476
Target Start/End: Complemental strand, 5460081 - 5459956
Alignment:
Q  351 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaa 448  Q
    ||||||||||| | ||||||| | |||||||||| ||||||| || ||||||||||||||||||||| ||||| ||||||||| ||||||||| ||| ||    
T  5460081 caagaaatgtttacctagttcagcccaacaatgatctactctagatgagagattgatctctccaatctactatcaatgagttctttacaaagaaatataa 5459982  T
Q  449 aattagttacaagaaattagcttcaaca 476  Q
    |||  |||||||||||||||||||||||    
T  5459981 aat--gttacaagaaattagcttcaaca 5459956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 382 - 477
Target Start/End: Complemental strand, 44455304 - 44455209
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||| |||| |||||||||||||||| ||||||||    
T  44455304 tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaaaagatac-aaatgagttacaagaaattagtttcaacaa 44455209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 834177 - 834286
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||    
T  834177 agttcggtccaact-tgacctactctgggggagagatagatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaat 834274  T
Q  466 tagcttcaacaa 477  Q
    |||||| |||||    
T  834275 tagcttaaacaa 834286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 13659346 - 13659455
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||  || |||||||||    
T  13659346 agttcggtccaact-taacctactctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagata-taaatgggtaacaagaaat 13659443  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  13659444 tagcttcaacaa 13659455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 347 - 477
Target Start/End: Complemental strand, 15820485 - 15820356
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    ||||||| ||||||| | |||||||| ||||||  |||||||||||||| |||||||| |||||| |||| |||||| |||||||||||| |||||||||    
T  15820485 acaccaataaatgtttacctagttcgatccaact-tgacctactctggatgagagatttatctcttcaatgcactatcaatgagttcttaaaaagagata 15820387  T
Q  446 caaaattagttacaagaaattagcttcaacaa 477  Q
    | ||||  ||||||||||||||||||||||||    
T  15820386 c-aaatgtgttacaagaaattagcttcaacaa 15820356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 31659396 - 31659287
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||  |||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||  ||||||||||||    
T  31659396 agttcggtccaact-tgacctaatctgagggagagattgatctctccaatccactatcaataagttcttacaaagagatac-aaatgggttacaagaaat 31659299  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  31659298 tagcttcaacaa 31659287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 51765565 - 51765450
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   || |||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||   ||    
T  51765565 tgttcacccagttcggtccaaacttgtcctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaaggggt 51765466  T
Q  456 tacaagaaattagctt 471  Q
    ||||||||||||||||    
T  51765465 tacaagaaattagctt 51765450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 31929345 - 31929431
Alignment:
Q  144 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaat 230  Q
    |||||||||||||| ||||| ||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||  ||||||||    
T  31929345 tgttgtgaattcggtctcaatttcaaacttcacgtcaatgaaatttagattcgtggagcaagtatcaatgacaaccatcaaccaaat 31929431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 45644364 - 45644467
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||| |||| ||||||||    
T  45644364 agttcggtccaact-tgacctaatctgggggagatattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttgcaagaaat 45644461  T
Q  466 tagctt 471  Q
    ||||||    
T  45644462 tagctt 45644467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 365 - 477
Target Start/End: Original strand, 37503565 - 37503673
Alignment:
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 463  Q
    |||||||| ||||||  |||| || ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||     ||||||||||    
T  37503565 ctagttcgatccaact-tgacataatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaa----ggttacaagaa 37503659  T
Q  464 attagcttcaacaa 477  Q
    ||||||||||||||    
T  37503660 attagcttcaacaa 37503673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 4552647 - 4552756
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||||||||  |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||    ||||||||||||    
T  4552647 agttcggtccaact-tgacctactctgagggagagattgatctctccaatccattatcaatgagttcttacaaagggatacaaaggg-gttacaagaaat 4552744  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  4552745 tagcttcaacaa 4552756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 365 - 471
Target Start/End: Original strand, 50167183 - 50167288
Alignment:
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 463  Q
    |||||||||||||||  ||| ||| ||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||  ||||||||||    
T  50167183 ctagttcggtccaact-tgagctaatctgggggagagattgatctctccaatccactatcaatgagtttttacaaagagatac-aaatgggttacaagaa 50167280  T
Q  464 attagctt 471  Q
    ||||||||    
T  50167281 attagctt 50167288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 477
Target Start/End: Original strand, 23555257 - 23555384
Alignment:
Q  348 caccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatac 446  Q
    |||||||||||||| |   |||||| ||||||  ||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  23555257 caccaagaaatgtttactcagttcgatccaact-tgacctactatgg-ggagagattgaactctccaatccactatcaatgagttcttacaaagagatac 23555354  T
Q  447 aaaattagttacaagaaattagcttcaacaa 477  Q
     |||| ||||| |||||||||| ||||||||    
T  23555355 -aaatgagttataagaaattagtttcaacaa 23555384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 50169211 - 50169323
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||| ||| |||||||||||||  ||||||| ||| | |||||||||||||||| ||||||||||| ||||||| ||||||||||||||| |||| ||||    
T  50169211 tgttgatccagttcggtccaact-tgacctaatctaggggagagattgatctcttcaatccactatcaatgagtacttacaaagagatac-aaatgagtt 50169308  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  50169309 acaagaaattagctt 50169323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 397 - 477
Target Start/End: Complemental strand, 16455750 - 16455670
Alignment:
Q  397 gagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||  ||||||||||||||||||||||||    
T  16455750 gagagattgatctctccaatccactatcaatgagttcttacacagagatac-aaatgggttacaagaaattagcttcaacaa 16455670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 13137986 - 13138095
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||| | ||||||||||| | |||||||||| ||||| ||||||||||| |||| |||||||||||||||| | ||||  ||||||||||||    
T  13137986 agttcggtccaata-tgacctactctaggggagagattgctctcttcaatccactatcaatgtgttcttacaaagagatgc-aaatgggttacaagaaat 13138083  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  13138084 tagcttcaacaa 13138095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 330 - 422
Target Start/End: Complemental strand, 2926706 - 2926613
Alignment:
Q  330 gtagagaaaagataacaacaccaa-gaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta 422  Q
    |||||| ||| | ||||||||||| ||| |||| | |||||||||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  2926706 gtagagtaaaaagaacaacaccaaagaattgtttacctagttcggtgcaacaatgacctactctgcagaagagattgatctctccaatccacta 2926613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 365 - 477
Target Start/End: Complemental strand, 41361074 - 41360963
Alignment:
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 463  Q
    |||||||||||||| | ||||||||| ||| ||||| ||||||||||  |||||||||| || |||||||||||||||||||| ||||  ||||||||||    
T  41361074 ctagttcggtccaata-tgacctactatgggggagatattgatctctttaatccactatcaacgagttcttacaaagagatac-aaatgggttacaagaa 41360977  T
Q  464 attagcttcaacaa 477  Q
    ||||| ||||||||    
T  41360976 attagtttcaacaa 41360963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 348 - 477
Target Start/End: Original strand, 37282682 - 37282811
Alignment:
Q  348 caccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagttc-ttacaaagagata 445  Q
    |||||| ||||||| ||||||||| |||||| | ||||||||||   |||||||||| ||||||||||||||||| |||||||||| ||||||||||||     
T  37282682 caccaaaaaatgtttatctagttcagtccaa-attgacctactccaaaggagagatttatctctccaatccactactaatgagttctttacaaagagatg 37282780  T
Q  446 caaaattagttacaagaaattagcttcaacaa 477  Q
    |||||   ||||| | ||||||||||||||||    
T  37282781 caaaa-gggttaccataaattagcttcaacaa 37282811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 477
Target Start/End: Original strand, 9109239 - 9109539
Alignment:
Q  177 atcaatgaaatttagattcgtggagcaagtatcaat--ggcaaccaataaccaaatgtaaattaccacaagcaataacaaca-atctagatctagtctag 273  Q
    |||||| |||||||||||  | ||||||||||||||  | ||||||||||| |||     || |||||||| |||||||||| |||||||||||  ||||    
T  9109239 atcaataaaatttagatttcttgagcaagtatcaatatgacaaccaataactaaa-----ataaccacaagtaataacaacagatctagatctaagctag 9109333  T
Q  274 aaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaa-gatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcg 372  Q
     || ||| ||   || | |||||||||| |||||||| |||||||| |||       |||||||  | |||||| | |||| ||||||| | |||||| |    
T  9109334 caaccaactgtgaagcataaccacaatcaaaccaaagaataaacaaagataaagagagtagagactaaataacagccccaaaaaatgtttacctagtttg 9109433  T
Q  373 gtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaattagct 470  Q
    || |||| ||||| ||||||   | ||||||||||||||||||| |||||| || | |||| ||||||||||||||||||   |||||||||||||| ||    
T  9109434 gttcaacgatgacttactctatggaagagattgatctctccaatacactatcaacgtgttctttacaaagagatacaaaa-gggttacaagaaattaact 9109532  T
Q  471 tcaacaa 477  Q
    |||||||    
T  9109533 tcaacaa 9109539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 37559877 - 37559981
Alignment:
Q  367 agttcggtccaacaatgacctactct-ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaa 464  Q
    |||||||||||||  ||||||| ||| || ||||||||||||||||||||| |||||| || |||||||||||||||||||| ||||  |||||||||||    
T  37559877 agttcggtccaact-tgacctaatctagggggagagattgatctctccaattcactatcaacgagttcttacaaagagatac-aaatgggttacaagaaa 37559974  T
Q  465 ttagctt 471  Q
    |||||||    
T  37559975 ttagctt 37559981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 358 - 477
Target Start/End: Original strand, 196908 - 197027
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggagg-agagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagt 455  Q
    |||| ||| |||||||||||||  ||||||| ||||| || ||||||  |||||||||||||||||| ||||||||||||||||| ||||| |||| |||    
T  196908 tgttgatccagttcggtccaact-tgacctaatctggggggagagataaatctctccaatccactatcaatgagttcttacaaagggatac-aaatgagt 197005  T
Q  456 tacaagaaattagcttcaacaa 477  Q
    |||||||||||| ||| |||||    
T  197006 tacaagaaattaacttaaacaa 197027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 365 - 477
Target Start/End: Original strand, 40122204 - 40122317
Alignment:
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat---aatgagttcttacaaagagatacaaaattagttacaag 461  Q
    |||||||||||||||  ||||||| | ||| ||||||||||||||||| ||||||||||   || |||||||||||||| ||||| |||| ||||| |||    
T  40122204 ctagttcggtccaact-tgacctaatatgggggagagattgatctctctaatccactatatcaaagagttcttacaaagtgatac-aaatgagttataag 40122301  T
Q  462 aaattagcttcaacaa 477  Q
    |||||||||| |||||    
T  40122302 aaattagcttaaacaa 40122317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 358 - 468
Target Start/End: Complemental strand, 40282545 - 40282435
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  40282545 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 40282448  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  40282447 tacaagaaattag 40282435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 375 - 467
Target Start/End: Complemental strand, 13938288 - 13938195
Alignment:
Q  375 ccaacaatgacctac-tctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaaaattagttacaagaaatta 467  Q
    ||||||||||||||| ||||| |||||||  ||||||||||||||||||| |||||||| |||||||||||||||||||   ||||||||||||||    
T  13938288 ccaacaatgacctacatctgggggagaga--gatctctccaatccactatcaatgagtttcttacaaagagatacaaaaaaggttacaagaaatta 13938195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 367 - 449
Target Start/End: Original strand, 3847131 - 3847213
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaa 449  Q
    |||||||||||||  ||||||| ||||| | |||||| ||||||||||||||||||| ||||||||||||||||| ||||||||    
T  3847131 agttcggtccaact-tgacctaatctggggaagagatggatctctccaatccactatcaatgagttcttacaaagggatacaaa 3847213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 396 - 477
Target Start/End: Complemental strand, 10925356 - 10925272
Alignment:
Q  396 ggagagattgatctctccaatccactat-aatga---gttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||| ||||||||||||||| |||||    ||||||||||||||||| |||| |||||||||||||||||||||||||    
T  10925356 ggagagattgatttctccaatccactatcaatgaattcttcttacaaagagatac-aaatgagttacaagaaattagcttcaacaa 10925272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 9987369 - 9987287
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 439  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| ||||||||||| ||||    
T  9987369 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaatgagttcttgcaaa 9987287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 20622237 - 20622319
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 439  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||||||    
T  20622237 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaa 20622319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 9036584 - 9036471
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||| ||||||||||||  |||| ||||||||||| || |||||||||| |||| |||||||||   ||    
T  9036584 tgttcacccagttcggtccaaacttgacctactctcgaggagagattgtactcttcaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 9036487  T
Q  456 tacaagaaattagctt 471  Q
    ||||||||||||||||    
T  9036486 tacaagaaattagctt 9036471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 477
Target Start/End: Original strand, 30476486 - 30476565
Alignment:
Q  398 agagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||||  ||||||| |||||| |||||||||    
T  30476486 agagattgatctgtccaatccagtatcaatgagttcttacaaagagatac-aaatgggttacaataaattatcttcaacaa 30476565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 477
Target Start/End: Original strand, 927966 - 928095
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    |||| |||||||||| | | ||||||||| |||  ||||||||  ||| | |||| ||| |||||| |||||||||| |||||||| ||||||||||||     
T  927966 acacaaagaaatgtttacccagttcggtctaact-tgacctaccttggggaagaggttggtctctctaatccactattaatgagtttttacaaagagatc 928064  T
Q  446 caaaattagttacaagaaattagcttcaacaa 477  Q
    |||||   ||||||||||||||||||||||||    
T  928065 caaaagg-gttacaagaaattagcttcaacaa 928095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 44203800 - 44203722
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  44203800 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 44203722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 477
Target Start/End: Original strand, 2262965 - 2263094
Alignment:
Q  349 accaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatac 446  Q
    ||||||||||||| |   ||||||| ||||||||||||||| ||   ||| |||||||||||| ||||||||||| ||| ||||| ||||||| |||||     
T  2262965 accaagaaatgtttactcagttcggaccaacaatgacctaccctaagggaaagattgatctcttcaatccactatcaataagttctttacaaaaagatat 2263064  T
Q  447 aaaattagttacaagaaattagcttcaacaa 477  Q
    ||||   |||||||||||||| |||||||||    
T  2263065 aaaa-gggttacaagaaattatcttcaacaa 2263094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 439
Target Start/End: Complemental strand, 36683824 - 36683766
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 439  Q
    ||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||    
T  36683824 tgacctactctgggggagagattgatttctacaatccactatcaatgagttcttacaaa 36683766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 41136169 - 41136107
Alignment:
Q  167 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaa 229  Q
    |||| |||||||||||||||||||||||||||| | |||||| | || |||||||||||||||    
T  41136169 caaatctcacatcaatgaaatttagattcgtggggaaagtattattgacaaccaataaccaaa 41136107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 439
Target Start/End: Complemental strand, 21054117 - 21054044
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 439  Q
    ||||||||||||   |||||||||||||||||||| |||  |||||||||||||||| || |||||||||||||    
T  21054117 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaagagttcttacaaa 21054044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 230
Target Start/End: Complemental strand, 6398960 - 6398927
Alignment:
Q  197 tggagcaagtatcaatggcaaccaataaccaaat 230  Q
    ||||||||||||||||||||||||||||||||||    
T  6398960 tggagcaagtatcaatggcaaccaataaccaaat 6398927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 423
Target Start/End: Original strand, 8871089 - 8871127
Alignment:
Q  385 cctactctggaggagagattgatctctccaatccactat 423  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  8871089 cctactatgggggagagattgatctctccaatccactat 8871127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 22079658 - 22079598
Alignment:
Q  167 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataacca 227  Q
    |||| |||| |||||||||||||||||| ||||  || ||||||||| ||| |||||||||    
T  22079658 caaatctcatatcaatgaaatttagatttgtgggacatgtatcaatgacaaacaataacca 22079598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 477
Target Start/End: Complemental strand, 25652178 - 25652135
Alignment:
Q  433 ttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||| |  |||||||||||||||||||||||||    
T  25652178 ttacaaagagatacaagag-agttacaagaaattagcttcaacaa 25652135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 450
Target Start/End: Original strand, 44650153 - 44650256
Alignment:
Q  348 caccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagtt-cttacaaagagata 445  Q
    |||||| |||| || | |||||||||||||| | ||||||||| | | | |||||||||||||| |||||||||| |||||| ||  |||||||||||||    
T  44650153 caccaaaaaatatttacctagttcggtccaa-attgacctacttttgggaagagattgatctcttcaatccactattaatgaattatttacaaagagata 44650251  T
Q  446 caaaa 450  Q
     ||||    
T  44650252 taaaa 44650256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 144 - 477
Target Start/End: Complemental strand, 40329158 - 40328828
Alignment:
Q  144 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 242  Q
    |||||||||||||| ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||| |||||    
T  40329158 tgttgtgaattcggtctcaaattttaaacctcacatcaatgaaatttagattcgtagagcaagtatcaatgacaaccaacaaccaaatgtaaataaccac 40329059  T
Q  243 aagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagat 342  Q
    |||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||        |||||||||||||    
T  40329058 aagcaataacaacagtctagatctaatctagaaaacaagtgcatagcaaaaccacaatctaaccaaaggataaacaagaaaaggagagtagagaaaagat 40328959  T
Q  343 aacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaaga 441  Q
    |||||||||||||||||||||   ||||| ||||||     |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40328958 aacaacaccaagaaatgttcactcagttccgtccaa-----acctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaaga 40328864  T
Q  442 gatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||| |||||||||||||||| || |||||    
T  40328863 gatacaaaatgagttacaagaaattagtttaaacaa 40328828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 144 - 471
Target Start/End: Complemental strand, 3772571 - 3772247
Alignment:
Q  144 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 243  Q
    ||||||||||||||  |||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| | |||| ||||||    
T  3772571 tgttgtgaattcgg--tcaattccaaacctcacatcaatgaaatttagattcgtggagcaggtatcaatggcaaccaatcaccaaaagaaaataaccaca 3772474  T
Q  244 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata 343  Q
    ||||| ||||||||||||||| || |||||||| ||||||||||| ||||||||||||||||||||| |||||||||||       ||||||||||||||    
T  3772473 agcaacaacaacaatctagatttaatctagaaatcaagtgcatagcaaaaccacaatctaaccaaagaataaacaagataaagagagtagagaaaagata 3772374  T
Q  344 acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagag 442  Q
    ||| ||||||||||| || ||| |||| ||||||||  ||||||||||||   || |||||||||||||||||||||||| ||| | ||||||||||||     
T  3772373 acaccaccaagaaatatttatccagtttggtccaac-ttgacctactctgagagatagattgatctctccaatccactatcaataaattcttacaaagat 3772275  T
Q  443 atacaaaattagttacaagaaattagctt 471  Q
    |||| |||| |||||||||||||||||||    
T  3772274 atac-aaatgagttacaagaaattagctt 3772247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 196 - 477
Target Start/End: Complemental strand, 11384314 - 11384034
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    |||||| |||||||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  11384314 gtggagtaagtatcattgacaagcaataaccaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaacc 11384215  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata-acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 394  Q
    |||||||||||||||||||||||||||       ||| |||||| ||| |||||||||| ||||||||| | |||||||||||||  | |||||||||||    
T  11384214 acaatctaaccaaaggataaacaagataaagagagtaaagaaaa-atagacaacaccaaaaaatgttcacccagttcggtccaac-ttaacctactctgg 11384117  T
Q  395 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||| ||| ||||||||||| ||| |||| |||||||||||||||||| |||| |||||||||||||||||||||||||    
T  11384116 aggagagatcgatgtctccaatccagtatcaatgggttcttacaaagagatac-aaatgagttacaagaaattagcttcaacaa 11384034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 196 - 477
Target Start/End: Complemental strand, 18655732 - 18655449
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    ||||||||| |||||||| |||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| ||| ||||||||||| ||||||    
T  18655732 gtggagcaaatatcaatgacaaccaataaccaaatgtaaataaacacaagcaataacaacaatatagatctagtctataaaccaagtgcatagcaaaacc 18655633  T
Q  296 acaatctaaccaaagga-taaacaagatnnnnnnng--tagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactct 392  Q
    |||||| ||   ||||| ||||||||||       |  || |||||||||||||||||||| ||||||||| | |||||||||||||  ||||||||| |    
T  18655632 acaatccaaagcaaggaataaacaagataaagagagagtaaagaaaagataacaacaccaaaaaatgttcacccagttcggtccaact-tgacctacttt 18655534  T
Q  393 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  18655533 ggaggagagattgatctctctaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaa 18655449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 238 - 477
Target Start/End: Complemental strand, 4283811 - 4283573
Alignment:
Q  238 accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaa 337  Q
    ||||||||||||||||||||| |||| |||||||| ||| ||||||||||| |||||||||||  ||||||||||||||||||||       ||| ||||    
T  4283811 accacaagcaataacaacaatatagacctagtctataaaccaagtgcatagcaaaaccacaattcaaccaaaggataaacaagataaagagagtaaagaa 4283712  T
Q  338 aagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac 436  Q
    |||||||||||||||||||||||||| | |||||||||||||  ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||    
T  4283711 aagataacaacaccaagaaatgttcacccagttcggtccaac-ttgacctactctagaggggagattgatctctccaatccactatcaatgagttcttac 4283613  T
Q  437 aaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||| ||||  ||||||||||||||||||||||||    
T  4283612 aaagagatac-aaatgggttacaagaaattagcttcaacaa 4283573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 198 - 477
Target Start/End: Original strand, 42434831 - 42435110
Alignment:
Q  198 ggagcaagtatcaatggcaaccaataaccaaa--tgtaaattaccacaagcaataacaacaatc--tagatctagtctagaaaacaagtgcatagaaaaa 293  Q
    |||||||||||||||||||||||| |||||||  ||| ||   |||||||||| |||||||||   |||| |||||||| ||  ||||||||||| ||||    
T  42434831 ggagcaagtatcaatggcaaccaacaaccaaaaatgttaa---ccacaagcaacaacaacaatagatagacctagtctataat-caagtgcatagcaaaa 42434926  T
Q  294 ccacaatctaaccaaagga-taaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactct 392  Q
    |||||||| ||   ||||| ||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||  |||||||||||    
T  42434927 ccacaatccaaagcaaggaataaacaagataaagaaagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaac-ttgacctactct 42435025  T
Q  393 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  42435026 ggaggagagattgatttctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaa 42435110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 276 - 475
Target Start/End: Original strand, 10930116 - 10930316
Alignment:
Q  276 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtaga-gaaaagataacaacaccaagaaat-gttcatctagttcgg 373  Q
    ||||||||||||| |||||||||||| ||| |||| |||||||||||       | | | |||||||||||||||||||||||| ||| | | |||||||    
T  10930116 aacaagtgcatagcaaaaccacaatccaacaaaagaataaacaagataaagggagcaaaagaaaagataacaacaccaagaaattgttgacccagttcgg 10930215  T
Q  374 tccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttc 472  Q
    ||||||  ||||||| ||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||  ||||  |||||||||||||||||||    
T  10930216 tccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgtgttcttacaaagagata-taaatgggttacaagaaattagcttc 10930313  T
Q  473 aac 475  Q
    |||    
T  10930314 aac 10930316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 276 - 477
Target Start/End: Complemental strand, 40221994 - 40221794
Alignment:
Q  276 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtc 375  Q
    ||||||||||||| |||||||||||| |||||||| || ||||||||       ||| ||| ||||||||||||||||  | | || | | |||||||||    
T  40221994 aacaagtgcatagcaaaaccacaatccaaccaaagaatgaacaagataaagagagtaaagacaagataacaacaccaaagattattgacccagttcggtc 40221895  T
Q  376 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 474  Q
    ||||  ||||||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||||||| |||||    
T  40221894 caact-tgacctaatctgggggagagattgatctctccaatccactatcaacgagttcttacaaagagatac-aaatgggttacaagaaattagtttcaa 40221797  T
Q  475 caa 477  Q
    |||    
T  40221796 caa 40221794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 358 - 477
Target Start/End: Complemental strand, 42498362 - 42498243
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||   |||    
T  42498362 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagaaatacaaaa-gggtt 42498264  T
Q  457 acaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||    
T  42498263 acaagaaattagcttcaacaa 42498243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 347 - 477
Target Start/End: Original strand, 1292454 - 1292582
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    |||||||||||||||   | |||||||||||||  ||||||||||||| ||||||||| || |||| |||||||||| ||||||||||||||||||||||    
T  1292454 acaccaagaaatgtttgcccagttcggtccaact-tgacctactctgg-ggagagatttatttctcaaatccactatcaatgagttcttacaaagagata 1292551  T
Q  446 caaaattagttacaagaaattagcttcaacaa 477  Q
    | |||| |||||||||||||||||||||||||    
T  1292552 c-aaatgagttacaagaaattagcttcaacaa 1292582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 15212944 - 15212835
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  15212944 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccattatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 15212847  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  15212846 tagcttcaacaa 15212835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 33352308 - 33352199
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  33352308 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 33352211  T
Q  466 tagcttcaacaa 477  Q
    ||| ||||||||    
T  33352210 taggttcaacaa 33352199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 43036581 - 43036472
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| | |||||||||||    
T  43036581 agttcggtccaact-tgacctaatctggaggagagattgatctctcaaatccactatcaatgagttcttacaaagagatac-aaatgaattacaagaaat 43036484  T
Q  466 tagcttcaacaa 477  Q
    ||| ||||||||    
T  43036483 tagtttcaacaa 43036472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 382 - 471
Target Start/End: Original strand, 19945383 - 19945473
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 471  Q
    ||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||||||||||    
T  19945383 tgacctactctcgaggagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaagtggttacaagaaattagctt 19945473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 358 - 467
Target Start/End: Original strand, 34256507 - 34256616
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  34256507 tgttcacccagttcggtccaaacttgacctactctagaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 34256605  T
Q  457 acaagaaatta 467  Q
    |||||||||||    
T  34256606 acaagaaatta 34256616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 44304023 - 44303910
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| |||||||| |||||   ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||  | ||    
T  44304023 tgttcacctagttcgatccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttaaaaagagatacaaaagga-tt 44303925  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  44303924 acaagaaattagctt 44303910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 390 - 477
Target Start/End: Complemental strand, 30143476 - 30143389
Alignment:
Q  390 tctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  30143476 tctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaa 30143389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 468
Target Start/End: Complemental strand, 2627895 - 2627792
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttaca-aagagatacaaaattagttacaagaaa 464  Q
    ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||  |||| |||||||    
T  2627895 agttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacacaagagatacaaaaagagttgcaagaaa 2627796  T
Q  465 ttag 468  Q
    ||||    
T  2627795 ttag 2627792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 3303680 - 3303789
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||||| ||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  3303680 agttcggtccaact-tgacctactgtgggggagagattgatctcttcaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaaat 3303777  T
Q  466 tagcttcaacaa 477  Q
    ||| || |||||    
T  3303778 taggttaaacaa 3303789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 27811436 - 27811327
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||| ||||||||||| |||| |||||||||||||||||| ||||  ||||||||||||    
T  27811436 agttcggtccaact-tgacctaatctgggggagagattgatctcttcaatccactatcaatgggttcttacaaagagatac-aaatgggttacaagaaat 27811339  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  27811338 tagcttcaacaa 27811327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 358 - 467
Target Start/End: Complemental strand, 17982821 - 17982712
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   |||    
T  17982821 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaa-gggtt 17982723  T
Q  457 acaagaaatta 467  Q
    |||||||||||    
T  17982722 acaagaaatta 17982712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 31218425 - 31218312
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||   |||    
T  31218425 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctctaatccactatcaatgagttcttccaaagagatacaaaa-gggtt 31218327  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  31218326 acaagaaattagctt 31218312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 358 - 467
Target Start/End: Original strand, 34254331 - 34254440
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||   |||    
T  34254331 tgttcacccagttcggtccaaacttgacctactctagaggagagattgatctctccaatccactatcaataagttcttacaaagagatacaaaa-gggtt 34254429  T
Q  457 acaagaaatta 467  Q
    |||||||||||    
T  34254430 acaagaaatta 34254440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 369 - 477
Target Start/End: Complemental strand, 4162652 - 4162546
Alignment:
Q  369 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaatta 467  Q
    |||||||||||  ||||||||||| | |||||||||||| |||||||||| |||| |||||||||||||||||||||||||| | |||||||||||||||    
T  4162652 ttcggtccaact-tgacctactcttggggagagattgatatctccaatcc-ctatcaatgagttcttacaaagagatacaaa-tgagttacaagaaatta 4162556  T
Q  468 gcttcaacaa 477  Q
    ||||||||||    
T  4162555 gcttcaacaa 4162546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 5689429 - 5689326
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||| | ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  5689429 agttcggtccaact-tgaccaaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 5689332  T
Q  466 tagctt 471  Q
    ||||||    
T  5689331 tagctt 5689326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 7597774 - 7597663
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaa 464  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||  | ||| ||||||    
T  7597774 agttcggtctaacaatgacctactatgggggagagattgatctctccaatccactatcaatgcattctttacaaagagatacaaaagga-ttataagaaa 7597676  T
Q  465 ttagcttcaacaa 477  Q
    |||||||||||||    
T  7597675 ttagcttcaacaa 7597663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 347 - 477
Target Start/End: Complemental strand, 10015257 - 10015130
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    ||||||||||||| | | | |||||||||||||  ||||||||| ||||| ||||||| |||||||||||||||||| ||||||||| || |||||||||    
T  10015257 acaccaagaaatgattacccagttcggtccaact-tgacctactatggag-agagatttatctctccaatccactatcaatgagttccta-aaagagata 10015161  T
Q  446 caaaattagttacaagaaattagcttcaacaa 477  Q
    |||| | |||||||||||||||||||||||||    
T  10015160 caaa-tgagttacaagaaattagcttcaacaa 10015130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 12702644 - 12702753
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||   ||||||||||||    
T  12702644 agttcggtccaact-tgacctaatctaggggagagattgatctctccaatccaatatcaatgagttcttacaaagagacacaaaa-gggttacaagaaat 12702741  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  12702742 tagcttcaacaa 12702753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 1746219 - 1746331
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||| ||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   |||    
T  1746219 tgttcacccagttcggtccaaacttgacctactatggaggagagattgaactctccaatccactatcaatgagttctt-caaagagatacaaaa-gggtt 1746316  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  1746317 acaagaaattagctt 1746331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 369 - 477
Target Start/End: Complemental strand, 4731814 - 4731707
Alignment:
Q  369 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaatta 467  Q
    |||||||||||  ||||| | ||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||    
T  4731814 ttcggtccaact-tgaccgaatctgggggagagatcgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaatta 4731717  T
Q  468 gcttcaacaa 477  Q
    | ||||||||    
T  4731716 ggttcaacaa 4731707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 3439671 - 3439558
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||||| ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  3439671 tgttcatccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 3439574  T
Q  456 tacaagaaattagctt 471  Q
    ||||||||||||||||    
T  3439573 tacaagaaattagctt 3439558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 382 - 477
Target Start/End: Complemental strand, 18141964 - 18141869
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| ||| | |||||||||||||||||||||||||||| || |||||||||||||| ||||| ||||  ||||||||||||||||||||||||    
T  18141964 tgacctaatctaggggagagattgatctctccaatccactatcaaagagttcttacaaagtgatac-aaatgggttacaagaaattagcttcaacaa 18141869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 347 - 477
Target Start/End: Complemental strand, 8153936 - 8153807
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    ||||||| |||| || ||| | |||||||||||  ||||||||||||  | |||||||||||||||||||| ||||| |||||||||||||||||| |||    
T  8153936 acaccaaaaaatatttatccatttcggtccaact-tgacctactctgaggaagagattgatctctccaatcaactatcaatgagttcttacaaagatata 8153838  T
Q  446 caaaattagttacaagaaattagcttcaacaa 477  Q
    |||||  ||||||| ||| |||||||||||||    
T  8153837 caaaa-gagttacacgaatttagcttcaacaa 8153807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 40321238 - 40321129
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| || ||||| ||||||||||||||  |||  ||||||||||||    
T  40321238 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaaagagtttttacaaagagatac-taatgggttacaagaaat 40321141  T
Q  466 tagcttcaacaa 477  Q
    || |||||||||    
T  40321140 taacttcaacaa 40321129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 365 - 474
Target Start/End: Original strand, 1345379 - 1345487
Alignment:
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 463  Q
    ||||||||||| |||  ||||||||||||| ||||||||||| |||| ||||||||||| ||||||||||| ||||||||||| | ||  ||||||||||    
T  1345379 ctagttcggtctaact-tgacctactctgggggagagattgaactcttcaatccactatcaatgagttctttcaaagagatac-atatgggttacaagaa 1345476  T
Q  464 attagcttcaa 474  Q
    |||||||||||    
T  1345477 attagcttcaa 1345487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 29796329 - 29796441
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgag--ttcttacaaagagatacaaaattagttacaagaa 463  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||||||||| ||| ||||||  || ||||||| || ||||||| | ||||||||||    
T  29796329 agttcggtccaacaatgacctacattgggggagagattgatctctccaatccattataaatgagtttttttacaaataggtacaaaaat-gttacaagaa 29796427  T
Q  464 attagcttcaacaa 477  Q
    || |||||||||||    
T  29796428 atcagcttcaacaa 29796441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 396 - 477
Target Start/End: Complemental strand, 30291737 - 30291656
Alignment:
Q  396 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||||| || || ||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  30291737 ggagagattgatctctccaatccactatcaaagaattcttacaaagtgatac-aaatgagttacaagaaattagcttcaacaa 30291656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 376 - 476
Target Start/End: Original strand, 32902191 - 32902292
Alignment:
Q  376 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaattagcttca 473  Q
    |||||||||||||||| || ||||||||||||||||| ||| |||||| ||||| ||| ||| ||||||||||||||  |||||||||||||||||||||    
T  32902191 caacaatgacctactcagggggagagattgatctctcaaattcactatcaatgaattctttagaaagagatacaaaa-aagttacaagaaattagcttca 32902289  T
Q  474 aca 476  Q
    |||    
T  32902290 aca 32902292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 396 - 477
Target Start/End: Complemental strand, 44353923 - 44353842
Alignment:
Q  396 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  44353923 ggagagattgatcttttcaatccactatcaatgagttcttacaaagagatac-aaatgtgttacaagaaattagcttcaacaa 44353842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 365 - 477
Target Start/End: Original strand, 19491707 - 19491818
Alignment:
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 463  Q
    |||||||||||||| | ||||||||| ||| ||||| ||||||||||  |||||||||| || |||||||||||||||||||| ||||  ||||||||||    
T  19491707 ctagttcggtccaata-tgacctactatgggggagatattgatctctttaatccactatcaacgagttcttacaaagagatac-aaatgggttacaagaa 19491804  T
Q  464 attagcttcaacaa 477  Q
    ||||| ||||||||    
T  19491805 attagtttcaacaa 19491818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 40222102 - 40222019
Alignment:
Q  144 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaa 229  Q
    ||||||||||||||   ||||||| |||| |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  40222102 tgttgtgaattcgg---caaattccaaacttcacatcaatgaaatttagatttgtggagaaagtatcaatggcaaccaacaaccaaa 40222019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 18106091 - 18106197
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||| | ||||| |||||||||||||||| ||||||||| | |||||||||||||    
T  18106091 agttcggtccaact-tgacctattctgg-ggagagattgatctctccaaac-actatcaatgagttcttacaaa-agatacaaa-tgagttacaagaaat 18106185  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  18106186 tagcttcaacaa 18106197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 41366625 - 41366733
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  |||| |||||||    
T  41366625 agttcggtccaact-tgacctaatctag-ggagagattgatctctccaatccactataaatgagttcttacaaagggatac-aaataggttaaaagaaat 41366721  T
Q  466 tagcttcaacaa 477  Q
    |||||| |||||    
T  41366722 tagcttaaacaa 41366733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 353 - 466
Target Start/End: Original strand, 3073870 - 3073981
Alignment:
Q  353 agaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaat 451  Q
    ||||||||| | | ||||||| |||||  ||||||||| ||| |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||     
T  3073870 agaaatgtttacccagttcggcccaact-tgacctactatgg-ggagagattgatctctccaagccattatcaatgagttcttacaaagagatacaaaaa 3073967  T
Q  452 tagttacaagaaatt 466  Q
    | |||||||||||||    
T  3073968 t-gttacaagaaatt 3073981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 367 - 447
Target Start/End: Complemental strand, 4733864 - 4733784
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagataca 447  Q
    |||||||||||||  ||||||| ||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  4733864 agttcggtccaact-tgacctaatctgggggagagatcgatctctccaatccactatcaatgaattcttacaaagagataca 4733784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 367 - 439
Target Start/End: Original strand, 4743224 - 4743296
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 439  Q
    |||||||||||||  ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  4743224 agttcggtccaact-tgacctactttgggggagagattgatctctccaatccactatcaatgagttcttacaaa 4743296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 351 - 477
Target Start/End: Original strand, 11711993 - 11712120
Alignment:
Q  351 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaa 448  Q
    ||||||||||| | | | || || |||||||||||||||| ||  |||||||||||||||| ||||||||||| ||||||||  ||||||||||||| ||    
T  11711993 caagaaatgtttacccaattaggaccaacaatgacctactttgagggagagattgatctcttcaatccactatcaatgagttatttacaaagagatataa 11712092  T
Q  449 aattagttacaagaaattagcttcaacaa 477  Q
    ||   ||| ||||||||||||||||||||    
T  11712093 aa-gggtttcaagaaattagcttcaacaa 11712120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 25690122 - 25690009
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  25690122 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 25690025  T
Q  456 tacaagaaattagctt 471  Q
    ||||||||||||||||    
T  25690024 tacaagaaattagctt 25690009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 6599130 - 6599021
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| ||||||||||||||||| |||||||||| ||||||||||||||||   |||| ||||  ||||||||||||    
T  6599130 agttcggtccaact-tgacctaatatgggggagagattgatctctctaatccactatcaatgagttcttacaaaagtatac-aaatgggttacaagaaat 6599033  T
Q  466 tagcttcaacaa 477  Q
    |||||| |||||    
T  6599032 tagcttaaacaa 6599021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 6674583 - 6674474
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| ||||||||||||||||| |||||||||| ||||||||||||||||   |||| ||||  ||||||||||||    
T  6674583 agttcggtccaact-tgacctaatatgggggagagattgatctctctaatccactatcaatgagttcttacaaaagtatac-aaatgggttacaagaaat 6674486  T
Q  466 tagcttcaacaa 477  Q
    |||||| |||||    
T  6674485 tagcttaaacaa 6674474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 239 - 386
Target Start/End: Complemental strand, 10240411 - 10240263
Alignment:
Q  239 ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaacc-aaaggataaacaagatnnnnnnngtagagaa 337  Q
    |||||| |||||||||||||||||||||| ||||||||  || || | || |||||||||||| |||| |||  |||||||||||       ||  ||||    
T  10240411 ccacaaacaataacaacaatctagatctaatctagaaacgaaatgtaaagcaaaaccacaatcgaaccaaaaaaataaacaagataaagagagtgaagaa 10240312  T
Q  338 aagataacaacaccaagaaatgttcatctagttcggtccaacaatgacc 386  Q
    |||| ||||| ||||||||||||| | |||||| | |||||||||||||    
T  10240311 aagagaacaaaaccaagaaatgtttacctagtttgatccaacaatgacc 10240263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 278 - 361
Target Start/End: Original strand, 2999723 - 2999806
Alignment:
Q  278 caagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgtt 361  Q
    ||||||||||| |||| |||||||||||||||| |||||||||||       |||||||||||||| ||||| |||||||||||    
T  2999723 caagtgcatagcaaaatcacaatctaaccaaagaataaacaagataaagagagtagagaaaagatatcaacatcaagaaatgtt 2999806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 9765902 - 9765800
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||| | ||||||| ||||| |||||||   | |||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  9765902 agttcggtccaata-tgacctaatctgggggagagagc-agctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 9765806  T
Q  466 tagctt 471  Q
    ||||||    
T  9765805 tagctt 9765800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 15691146 - 15691105
Alignment:
Q  167 caaacctcacatcaatgaaatttagattcgtggagcaagtat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15691146 caaacctcacatcaatgaaatttagattcgtggagcaagtat 15691105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 8965701 - 8965810
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| ||||||||| |||||||| || |||||| |||||||||||||||||||||| ||||   |||| |||||||    
T  8965701 agttcggtccaact-tgacctaatatgggggagagatttatctctccgatgcactatcaatgagttcttacaaagagatataaaa-gggttataagaaat 8965798  T
Q  466 tagcttcaacaa 477  Q
    || |||||||||    
T  8965799 taacttcaacaa 8965810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 477
Target Start/End: Complemental strand, 11137320 - 11137074
Alignment:
Q  233 aaattaccacaagcaataacaaca-atctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngt 331  Q
    |||| ||||||||||| || |||| ||||| ||||| ||||| || |||||  | ||||||||||||||| |||||| | |||||||||||       ||    
T  11137320 aaataaccacaagcaacaataacatatctaaatctaatctagcaatcaagtataaagaaaaaccacaatcgaaccaatgaataaacaagataaagagagt 11137221  T
Q  332 agagaaaagataacaaca-ccaagaaatgttcatc-tagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatga 428  Q
    |||||||| | ||||||| | ||||| | || | | ||||||||||||||||||||||||| | |||||| ||   || |||||||| |||||| |||||    
T  11137220 agagaaaacaaaacaacatcaaagaattctttaccttagttcggtccaacaatgacctactat-gaggag-ga---atatctccaattcactatcaatga 11137126  T
Q  429 g----ttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |    || ||||||||||||||||||   |||| |||||||||||||||||||    
T  11137125 gtttttttttacaaagagatacaaaa-cggttataagaaattagcttcaacaa 11137074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 38864017 - 38863961
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat 423  Q
    ||||||||| |||||| ||||||| || ||| |||||||||||||||||||||||||    
T  38864017 agttcggtctaacaataacctactatgcaggggagattgatctctccaatccactat 38863961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 15290683 - 15290614
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  15290683 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 15290614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 15471052 - 15470983
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  15471052 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 15470983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Original strand, 42575333 - 42575402
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  42575333 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 42575402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 477
Target Start/End: Complemental strand, 1822423 - 1822341
Alignment:
Q  396 ggagagattgatctctccaatccactataa-tgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||||||| |||||| | |||||| || ||||| ||||| ||||   ||||||||||||||||||||||||    
T  1822423 ggagagattgatctctccaattcactattagtgagttatttacaaatagatataaaagg-gttacaagaaattagcttcaacaa 1822341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 477
Target Start/End: Complemental strand, 1856868 - 1856786
Alignment:
Q  396 ggagagattgatctctccaatccactataa-tgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||||||| |||||| | |||||| || ||||| ||||| ||||   ||||||||||||||||||||||||    
T  1856868 ggagagattgatctctccaattcactattagtgagttatttacaaatagatataaaagg-gttacaagaaattagcttcaacaa 1856786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 448
Target Start/End: Complemental strand, 10929907 - 10929865
Alignment:
Q  407 tctctccaatccactat-aatgagttcttacaaagagatacaa 448  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  10929907 tctctccaatccactatcaatgagttcttacaaagagttacaa 10929865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 144 - 477
Target Start/End: Complemental strand, 46860857 - 46860523
Alignment:
Q  144 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 242  Q
    |||||||||||||  ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  46860857 tgttgtgaattcgatctcaaattccaaacatcacatcaatgaaatttagattcgtggagcaaatatcaatggcaaccaataaccaaatgtaaataaccac 46860758  T
Q  243 aagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagat 342  Q
    || ||| ||||||||| |||| ||| |||| ||| ||||||||||| |||||||||||||||||||||||||||||||||       ||| |||||||||    
T  46860757 aaacaacaacaacaatatagacctaatctataaaccaagtgcatagcaaaaccacaatctaaccaaaggataaacaagataaagagagtaaagaaaagat 46860658  T
Q  343 aacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaaga 441  Q
    ||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  46860657 aacaacaccaaaaaatgttcatccaattcggtccaacaatgacctactctggaggaaagattgatctctccaatccactatcaatgagttattacaaaga 46860558  T
Q  442 gatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||| ||||  ||||||||||||||||||||||||    
T  46860557 gatac-aaatgggttacaagaaattagcttcaacaa 46860523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 144 - 471
Target Start/End: Original strand, 41819310 - 41819636
Alignment:
Q  144 tgttgtgaattcggactcaaatt-caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 242  Q
    ||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||   |||    
T  41819310 tgttgtgaattgggtctcaaatttcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaacaaccaaaagtaaat---cac 41819406  T
Q  243 aagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaaga- 341  Q
    |||||| ||||||||| |||| |||||| | ||| ||||||||||| |||||||||||||||||||||||||||||||||       |||||||||| |     
T  41819407 aagcaacaacaacaatatagacctagtccataaaccaagtgcatagcaaaaccacaatctaaccaaaggataaacaagataaagaaagtagagaaaaaaa 41819506  T
Q  342 taacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaaaga 441  Q
    |||||||||||| ||||||||| | |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41819507 taacaacaccaataaatgttcacccagtttggtccaacaatgacctactctggaggagagattgatgtctccaatccactataatgagttcttacaaaga 41819606  T
Q  442 gatacaaaattagttacaagaaattagctt 471  Q
    ||||||||||  ||||||||||||||||||    
T  41819607 gatacaaaatgggttacaagaaattagctt 41819636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 143 - 477
Target Start/End: Complemental strand, 36019233 - 36018901
Alignment:
Q  143 atgttgtgaattc-ggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattacc 240  Q
    ||||||||||||| |||||||||| | |||| ||| ||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||    
T  36019233 atgttgtgaattccggactcaaatcccaaacttcatatcaatgaaatttagattcgtggagcaagtatcaatcacaaccaataatcaaatgtaaattacc 36019134  T
Q  241 acaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaag 340  Q
    |||||||| || ||||||||||||||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||       ||||| |||||    
T  36019133 acaagcaacaataacaatctagatctaatctagaaaacaagtgtttaacaaaaccacaatctaaccaaaggataaacaagataaagagagtagaaaaaag 36019034  T
Q  341 ataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaaag 440  Q
    ||||||||||||| ||||||||||| |||||||||||||||  || ||  |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  36019033 ataacaacaccaaaaaatgttcatccagttcggtccaacaa--acata--ctgggggagagattgacctctccaatccactataatgagttcttacaaag 36018938  T
Q  441 agatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  36018937 agatacaaaatgagttacaagaaattaacttcaacaa 36018901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 49199303 - 49199589
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  49199303 gtggagcaagtatcaatggcaaccaataaccaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaacc 49199402  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaa---agataacaacaccaaga-aatgttcatctagttcggtccaacaatgacctactc 391  Q
    |||||||||||||||||||||||||||       |||||||||   ||| ||||||||||||| | |||||| | ||||||||||||| |||||||| ||    
T  49199403 acaatctaaccaaaggataaacaagataaagagagtagagaaaaatagacaacaacaccaagagattgttcacccagttcggtccaaccatgacctagtc 49199502  T
Q  392 tggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  49199503 tggaggagagattaatctctccaatccactatcaatgagttcttacaaagagatacaaaatgggttacaagaaattagcttcaacaa 49199589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 43401635 - 43401921
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |    
T  43401635 gtggagcaagtatcaatggcaaccaataaccaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaatc 43401734  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaa---agataacaacaccaaga-aatgttcatctagttcggtccaacaatgacctactc 391  Q
    |||||||||||||||||||||||||||       |||||||||   ||| ||||||||||||| | |||||| | ||||||||||||| |||||||||||    
T  43401735 acaatctaaccaaaggataaacaagataaagagagtagagaaaaatagacaacaacaccaagagattgttcacccagttcggtccaaccatgacctactc 43401834  T
Q  392 tggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||| || ||||||||||||||| |||||||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  43401835 tggaggagagattaatttctccaatccactatcaatgagttcttacaaagagataaaaaatgcgttacaagaaattagcttcaacaa 43401921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 43403578 - 43403864
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  43403578 gtggagcaagtatcaatggcaaccaataaccaaatgtaaataaccacaagcaataataacaatctagatctaatctagaaaacaagtgcatagcaaaacc 43403677  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaa---agataacaacaccaaga-aatgttcatctagttcggtccaacaatgacctactc 391  Q
    |||||||||||||||||||||||||||       || ||||||   | | ||||||| ||||| | |||||| | ||||||||||||| |||||||||||    
T  43403678 acaatctaaccaaaggataaacaagataaagagagtggagaaaaataaacaacaacatcaagagattgttcacccagttcggtccaaccatgacctactc 43403777  T
Q  392 tggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| || || ||||||||||||| |||||||||||    
T  43403778 tggaggagagattaatctctccaatccactatcaatgagttcttacaaagagataaaacatgagttacaagaaatgagcttcaacaa 43403864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 196 - 474
Target Start/End: Original strand, 6095438 - 6095715
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||| |||||||| |||  ||||| |||| ||||||    
T  6095438 gtggagcaagtatcaatggcaaccaataatcaaatgtaaataaccacaagcaataacaacaatatagacctagtctataaacgaagtgtatagcaaaacc 6095537  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgga 395  Q
    |||||| |||||| | |||||||||||       ||| ||||||||||||||||||||||||||||||   |||||||||||||  ||||||||||||||    
T  6095538 acaatccaaccaaggcataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacacagttcggtccaac-ttgacctactctgga 6095636  T
Q  396 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 474  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||| ||||||    
T  6095637 ggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattaacttcaa 6095715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 196 - 449
Target Start/End: Original strand, 55301808 - 55302064
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaac-aagtgcatagaaaaa 293  Q
    |||||||||||||||||| |||||||||||||||||| ||| | ||||||||||||| ||||||||||||||| |||||||||| |||||||||| |||     
T  55301808 gtggagcaagtatcaatgacaaccaataaccaaatgtgaataaaccacaagcaataaaaacaatctagatctaatctagaaaaccaagtgcatagcaaag 55301907  T
Q  294 ccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctg 393  Q
    |||||||  ||||||||||||||||||||       ||| ||||||||||||||||| |||||||||||| | |||||||||||||||||||||||| ||    
T  55301908 ccacaattcaaccaaaggataaacaagataaagagagtaaagaaaagataacaacactaagaaatgttcaccaagttcggtccaacaatgacctactatg 55302007  T
Q  394 gaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaa 449  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  55302008 gaggagagattgatctctccaatccactatcaatgaattcttacaaagagatacaaa 55302064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 196 - 477
Target Start/End: Complemental strand, 30236456 - 30236174
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaac 294  Q
    |||||||||||||||||| ||||||| |||||||  |  |||| |||||||||| ||||||||| |||| |||||||| ||| ||||||||||  ||||     
T  30236456 gtggagcaagtatcaatgtcaaccaacaaccaaaaattgattaaccacaagcaacaacaacaatatagacctagtctataaaccaagtgcataacaaaaa 30236357  T
Q  295 cacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaa-tgttcatctagttcggtccaacaatgacctactctg 393  Q
    ||||||| |||||| | |||||||||||       ||| |||||||||||||||||||||||| |||| | |||||||||||||||  ||||||| ||||    
T  30236356 cacaatccaaccaaggtataaacaagataaagagagtaaagaaaagataacaacaccaagaaattgttgacctagttcggtccaac-ttgacctaatctg 30236258  T
Q  394 gaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  30236257 ggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaataggttacaagaaattagcttcaacaa 30236174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 199 - 477
Target Start/End: Complemental strand, 54594033 - 54593753
Alignment:
Q  199 gagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccaca 298  Q
    ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||| ||| ||||  ||||||| ||| || |||||||| |||||||||    
T  54594033 gagcaagtatcaatgacaaccaataaccaaatataaataaccacaagcaataacaagaatatagacatagtctataaaccatgtgcatagcaaaaccaca 54593934  T
Q  299 atctaaccaaagga-taaacaagatnnnnnnng--tagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgga 395  Q
    ||| ||   ||||| ||||||||||       |  || |||||||||||||||||||||||||||||| | |||| ||||||||  |||| |||||||||    
T  54593933 atccaaagcaaggaataaacaagataaagagagactaaagaaaagataacaacaccaagaaatgttcacccagtttggtccaact-tgacatactctgga 54593835  T
Q  396 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||    
T  54593834 ggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaataaattagcttcaacaa 54593753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 144 - 477
Target Start/End: Complemental strand, 46173738 - 46173406
Alignment:
Q  144 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtg--gagcaagtatcaatggcaaccaataaccaaatgtaaattacca 241  Q
    ||||||||||||||  |||| | ||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||| |||||   |||    
T  46173738 tgttgtgaattcgg--tcaattccaaacttcacatcaatgaaatttagattcgtgtggagcaagtatcaatggcaaccaacaaccaaa-gtaaa---cca 46173645  T
Q  242 caagcaataacaacaatctagat--ctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtaga-gaaa 338  Q
    ||||||| | ||| ||| || |   ||| |||| ||| ||||||||||| |||||||||||| ||| ||   |||||||||||       | | | ||||    
T  46173644 caagcaacagcaataatatataaacctattctataaaccaagtgcatagcaaaaccacaatccaactaagaaataaacaagataaagaaagcaaaagaaa 46173545  T
Q  339 agataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac 436  Q
    |||||||||||||||||||| ||| |||||||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  46173544 agataacaacaccaagaaattgttgatctagttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgaattcttac 46173446  T
Q  437 aaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||| ||||  ||||||||||||||||||||||||    
T  46173445 aaagagatac-aaatgggttacaagaaattagcttcaacaa 46173406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 334 - 474
Target Start/End: Complemental strand, 4570144 - 4570004
Alignment:
Q  334 agaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc 432  Q
    |||||| ||||||||||||||||||||| | | ||||||||||||   | ||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  4570144 agaaaatataacaacaccaagaaatgttgacccagttcggtccaaacttcacctactctggagtagagattgatctctccaatccactatcaatgagttc 4570045  T
Q  433 ttacaaagagatacaaaattagttacaagaaattagcttcaa 474  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  4570044 ttacaaagagatac-aaatgagttacaagaaattagcttcaa 4570004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 358 - 477
Target Start/End: Complemental strand, 7762433 - 7762314
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||    
T  7762433 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagtt 7762335  T
Q  457 acaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||    
T  7762334 acaagaaattagcttcaacaa 7762314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 358 - 477
Target Start/End: Complemental strand, 34491379 - 34491261
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  34491379 tgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagtt 34491282  T
Q  457 acaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||    
T  34491281 acaagaaattagcttcaacaa 34491261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 276 - 467
Target Start/End: Complemental strand, 40913546 - 40913352
Alignment:
Q  276 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa---gataacaacaccaagaaat-gttcatctagttc 371  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||        |||||||||   || || |||||||||| || ||| | | |||||    
T  40913546 aacaagtgcatagcaaaaccacaatctaaccaaaggataaacaagataaagagattagagaaaaatagacaataacaccaagagattgttgacccagttc 40913447  T
Q  372 ggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaatta 467  Q
    ||||||||  ||||||| ||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  40913446 ggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcgatgagttcttacaaagagatac-aaatgagttacaagaaatta 40913352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 347 - 477
Target Start/End: Complemental strand, 32891282 - 32891153
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    ||||||||||||| | ||| |||||||||||||| |||||||||| || ||||||||| |||||||||||||||||| || |||||||||||||||||||    
T  32891282 acaccaagaaatgattatccagttcggtccaaca-tgacctactccgggggagagatttatctctccaatccactatcaacgagttcttacaaagagata 32891184  T
Q  446 caaaattagttacaagaaattagcttcaacaa 477  Q
    | |||| |||||||||||||||||||||||||    
T  32891183 c-aaatgagttacaagaaattagcttcaacaa 32891153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 196 - 477
Target Start/End: Complemental strand, 47304583 - 47304300
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    |||||||||||||||||| ||||||| ||||||| ||||||   ||||||||| ||||| ||| |||| |||||||| ||| ||||||||||| ||||||    
T  47304583 gtggagcaagtatcaatgacaaccaacaaccaaa-gtaaat---cacaagcaacaacaataatatagacctagtctataaaccaagtgcatagcaaaacc 47304488  T
Q  296 acaatctaaccaaaggataaacaagatnnnnnnngtaga------gaaaagataacaacaccaagaaat-gttcatctagttcggtccaacaatgaccta 388  Q
    |||||| ||| || | |||||||||||       | | |      ||||||||||||||||||| |||| ||| | | ||||||||| |||  |||||||    
T  47304487 acaatccaactaaggaataaacaagataaagaaagcaaaagaaaagaaaagataacaacaccaataaattgttgacccagttcggtcaaact-tgaccta 47304389  T
Q  389 ctctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
     ||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||||| | ||  ||||||||| |||| |||||||||    
T  47304388 atcttggggagagattgatctctccaatccactatcaatgagttcttacgaagagatac-agatgggttacaagatattaacttcaacaa 47304300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 382 - 477
Target Start/End: Complemental strand, 7764608 - 7764513
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  7764608 tgacctactctggaggagagattcatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagttacaagaaattagctttaacaa 7764513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 19683889 - 19684002
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  19683889 tgttcacccagttcggtccaaacttgacctactatggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 19683987  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  19683988 acaagaaattagctt 19684002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 45095331 - 45095218
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  45095331 tgttcacccagttcggtccaaacttgacctactctagaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 45095233  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  45095232 acaagaaattagctt 45095218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 358 - 477
Target Start/End: Complemental strand, 9581450 - 9581331
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  |||    
T  9581450 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggtt 9581352  T
Q  457 acaagaaattagcttcaacaa 477  Q
    | ||||||||||||| |||||    
T  9581351 aaaagaaattagcttaaacaa 9581331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 382 - 477
Target Start/End: Complemental strand, 29811012 - 29810917
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  29811012 tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaa 29810917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 29813221 - 29813112
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||| ||||| | ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||  ||||||||||||    
T  29813221 agttcggtccaaca-tgaccaaatctgggggagagattgatctctccaatccactataaatgagttcttacaaagagatgc-aaatgggttacaagaaat 29813124  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  29813123 tagcttcaacaa 29813112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 40735541 - 40735432
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| | ||||||| ||||    
T  40735541 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaactggttacaataaat 40735444  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  40735443 tagcttcaacaa 40735432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 51398972 - 51398863
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| ||||||||  |||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||    
T  51398972 agttcggtccaact-tgacctaatctgggggagagataaatctctccaatccactatcaatgagttcttacaaagagatacaaa-tgagttacaagaaat 51398875  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  51398874 tagcttcaacaa 51398863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 382 - 471
Target Start/End: Complemental strand, 37408602 - 37408513
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 471  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||    
T  37408602 tgacctactctggaggagagattgatctcttcaatccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaattagctt 37408513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 358 - 468
Target Start/End: Complemental strand, 801260 - 801148
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  801260 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaatgagttcttacaaaagagatacaaaaagagt 801161  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  801160 tacaagaaattag 801148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 16499187 - 16499078
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||  || |||||||||    
T  16499187 agttcggtccaact-taacctactctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagata-taaatgggtaacaagaaat 16499090  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  16499089 tagcttcaacaa 16499078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 44331703 - 44331594
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||   |||||||||||    
T  44331703 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaataagttcttacaaagagatac-aaatggcttacaagaaat 44331606  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  44331605 tagcttcaacaa 44331594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 347 - 477
Target Start/End: Original strand, 53921493 - 53921622
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    |||| |||||||||| ||| ||||||||| |||  ||| |||||| || |||||||||||||||||||||||||||| ||||||||||||||||  ||||    
T  53921493 acactaagaaatgtttatccagttcggtcaaact-tgatctactccgggggagagattgatctctccaatccactatcaatgagttcttacaaaatgata 53921591  T
Q  446 caaaattagttacaagaaattagcttcaacaa 477  Q
    | |||| ||||||||||||||||||| |||||    
T  53921592 c-aaatgagttacaagaaattagctttaacaa 53921622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 5258144 - 5258257
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   |||    
T  5258144 tgttcaccaagttcggtccaaacttgacctactctggagaagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaa-gggtt 5258242  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  5258243 acaagaaattagctt 5258257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 23197939 - 23198052
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||| ||||||||||   |||    
T  23197939 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaattcactatcaatgagttcttacaaaaagatacaaaa-gggtt 23198037  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  23198038 acaagaaattagctt 23198052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 23200138 - 23200251
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||| ||||||||||   |||    
T  23200138 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaattcactatcaatgagttcttacaaaaagatacaaaa-gggtt 23200236  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  23200237 acaagaaattagctt 23200251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 365 - 477
Target Start/End: Original strand, 44700487 - 44700597
Alignment:
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 463  Q
    |||||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||    
T  44700487 ctagttcggtccaact-tgacctaatgtgg-ggagagattgatctctccaatccactatcaaagagttcttacaaagagatac-aaataggttacaagaa 44700583  T
Q  464 attagcttcaacaa 477  Q
    ||||||||||||||    
T  44700584 attagcttcaacaa 44700597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 382 - 477
Target Start/End: Complemental strand, 760991 - 760896
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  |||||||||||||||||| |||||    
T  760991 tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaattagcttaaacaa 760896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 22835012 - 22835121
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||    
T  22835012 agttcggtccaact-tgacctaatatggcggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaat 22835109  T
Q  466 tagcttcaacaa 477  Q
    |||||| |||||    
T  22835110 tagcttaaacaa 22835121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 40734656 - 40734547
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||    
T  40734656 agttcggtccaact-tgacctaatttgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgtgttacaagaaat 40734559  T
Q  466 tagcttcaacaa 477  Q
    ||| ||||||||    
T  40734558 taggttcaacaa 40734547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 5260323 - 5260436
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||| ||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   |||    
T  5260323 tgttcaccaagttcggtccaaacttgacctactttggagaagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaa-gggtt 5260421  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  5260422 acaagaaattagctt 5260436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 144 - 477
Target Start/End: Complemental strand, 20938032 - 20937705
Alignment:
Q  144 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 243  Q
    |||||||||||||||| |   | |||| ||||||||| | ||||||||||| ||||  |||||||||||| |||| ||||| ||||     || || |||    
T  20938032 tgttgtgaattcggacac---tccaaatctcacatcagtaaaatttagatttgtgggacaagtatcaatgacaactaataagcaaa-----ataactaca 20937941  T
Q  244 agcaataacaacaa-tctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagat 342  Q
    ||||  |||||||| |||||||||| ||||  || |||||| | || |||| ||||||| |||||||  |||||||||||       ||||||||||||     
T  20937940 agcagcaacaacaaatctagatctaatctattaatcaagtgtaaagtaaaatcacaatcgaaccaaataataaacaagataaagagagtagagaaaagag 20937841  T
Q  343 aacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaa 439  Q
    ||| |||| ||  ||| ||| | ||||||| ||||||| ||||| |||| ||| |||  ||||||||||||||||| | ||| ||||||||| || ||||    
T  20937840 aaccacacaaaataattgtttacctagttctgtccaactatgacatactttgggggaacgattgatctctccaatcta-tatcaatgagttcttttcaaa 20937742  T
Q  440 gagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||   |||||||||||||| |||||||||    
T  20937741 gagatacaaaa-gggttacaagaaattaacttcaacaa 20937705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 382 - 468
Target Start/End: Original strand, 7780028 - 7780114
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagttacaagaaattag 468  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||   |||||||||||||||    
T  7780028 tgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa--ggttacaagaaattag 7780114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 29196396 - 29196499
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||| ||||||||    
T  29196396 agttcggtccaact-tgacctaatttgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttccaagaaat 29196493  T
Q  466 tagctt 471  Q
    ||||||    
T  29196494 tagctt 29196499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 5433774 - 5433905
Alignment:
Q  184 aaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtc-tagaaaacaagt 282  Q
    |||||||||||||||||||||||||||||| |||||||||||||||     || ||||||||||| |||||||||||||  ||| || || ||  ||| |    
T  5433774 aaatttagattcgtggagcaagtatcaatgacaaccaataaccaaa-----ataaccacaagcaacaacaacaatctagtcctaatcatataagtcaaat 5433868  T
Q  283 gcatagaaaaaccacaatctaaccaaaggataaacaa 319  Q
    | |||| |||||||||||| |||||||| ||||||||    
T  5433869 gtatagcaaaaccacaatcgaaccaaagaataaacaa 5433905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 31340064 - 31340186
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    |||||||| ||||||||||||||||| ||||||| |||||   |||||||||| ||||| ||| |||| |||||||| ||| ||||||||||| ||||||    
T  31340064 gtggagcatgtatcaatggcaaccaacaaccaaa-gtaaa---ccacaagcaacaacaataatatagacctagtctataaaccaagtgcatagcaaaacc 31340159  T
Q  296 acaatctaaccaaaggataaacaagat 322  Q
    |||||| ||| || | |||||||||||    
T  31340160 acaatccaactaaggaataaacaagat 31340186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 382 - 477
Target Start/End: Original strand, 39153385 - 39153480
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| ||||| |||||||||| ||||||||||||||||| |||||||||||| |||| ||||| |||| ||||||||||||||||||| |||||    
T  39153385 tgacctaatctgggggagagattgttctctccaatccactatcaatgagttcttataaagggatac-aaatgagttacaagaaattagcttaaacaa 39153480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 382 - 468
Target Start/End: Original strand, 9636150 - 9636236
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattag 468  Q
    ||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||   |||||||||||||||    
T  9636150 tgacctactttggaggagagattgaactctccaatccactatcaatgagttcttacaaaaagatacaaaa-gggttacaagaaattag 9636236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 31314603 - 31314494
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| ||||| |||||||||||||||||||||| || ||||||||||||| |||||| ||||  ||||||||||||    
T  31314603 agttcggtccaact-tgacctaatatgggggagatattgatctctccaatccactatcaaagagttcttacaaaaagatac-aaatgggttacaagaaat 31314506  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  31314505 tagcttcaacaa 31314494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 382 - 477
Target Start/End: Original strand, 5236481 - 5236575
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| ||||| ||| ||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  5236481 tgacctaatctgg-ggaaagattgatctctcgaatccattatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaa 5236575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 29682517 - 29682408
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||| ||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  || |||||||||    
T  29682517 agttcggtccaact-tgatctaatctaggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggtgacaagaaat 29682420  T
Q  466 tagcttcaacaa 477  Q
    |||||| |||||    
T  29682419 tagcttaaacaa 29682408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 32744446 - 32744555
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| ||| ||||| |||||| ||||||||||| || |||||||||||||| ||||| |||| |||||||||||||    
T  32744446 agttcggtccaact-tgacctaatctgggggatagatttatctcttcaatccactatcaaagagttcttacaaagtgatac-aaatgagttacaagaaat 32744543  T
Q  466 tagcttcaacaa 477  Q
    |||||| |||||    
T  32744544 tagcttaaacaa 32744555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 347 - 477
Target Start/End: Complemental strand, 33192009 - 33191881
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagat 444  Q
    ||||||| ||||||| | | ||||  ||||||||||||||| |||||||| ||||||||||||||| |||||||||| ||||||||| ||||||||| ||    
T  33192009 acaccaaaaaatgtttaccaagttttgtccaacaatgacctcctctggag-agagattgatctctctaatccactatcaatgagttctttacaaagacat 33191911  T
Q  445 acaaaattagttacaagaaattagcttcaacaa 477  Q
       ||| | |||||||||| |||||||||||||    
T  33191910 ---aaaatggttacaagaacttagcttcaacaa 33191881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 346 - 477
Target Start/End: Original strand, 35138694 - 35138825
Alignment:
Q  346 aacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagaga 443  Q
    |||||||||||||||| |||   |||||| ||||||||||||||| | | || ||||||| ||||| | ||||||||| ||||||||| |||||||||||    
T  35138694 aacaccaagaaatgtttatccgattcggttcaacaatgacctacttttg-ggggagattgttctcttccatccactatcaatgagttctttacaaagaga 35138792  T
Q  444 tacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||  |||| |||||||||| |||||||||    
T  35138793 tacaaaa-gagttgcaagaaattaacttcaacaa 35138825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 467
Target Start/End: Original strand, 4055773 - 4055874
Alignment:
Q  367 agttcggtccaacaatgacctac-tctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaaaattagttacaagaa 463  Q
    ||||||| ||||||||||||||| ||||| |||||||  ||||||| ||||||||||| |||||||| |||||||||||||||||||   ||||||||||    
T  4055773 agttcggcccaacaatgacctacatctgggggagaga--gatctcttcaatccactatcaatgagtttcttacaaagagatacaaaagaggttacaagaa 4055870  T
Q  464 atta 467  Q
    ||||    
T  4055871 atta 4055874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 6716667 - 6716554
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  6716667 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 6716570  T
Q  456 tacaagaaattagctt 471  Q
    ||||||||||||||||    
T  6716569 tacaagaaattagctt 6716554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 54635292 - 54635179
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  54635292 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 54635195  T
Q  456 tacaagaaattagctt 471  Q
    ||||||||||||||||    
T  54635194 tacaagaaattagctt 54635179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 9666476 - 9666585
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  | ||||| ||||| ||||||||  |||||||||||||||||| || || ||||||||||||| || ||| | |||||||||||||    
T  9666476 agttcggtccaacttt-acctaatctgggggagagatcaatctctccaatccactatcaaagaattcttacaaagaggtataaa-tgagttacaagaaat 9666573  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  9666574 tagcttcaacaa 9666585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 367 - 439
Target Start/End: Complemental strand, 45283145 - 45283071
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttacaaa 439  Q
    ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||||||    
T  45283145 agttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaa 45283071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 172 - 318
Target Start/End: Complemental strand, 5270723 - 5270580
Alignment:
Q  172 ctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaaca-atctagatctagtc 270  Q
    ||||||||||||||||||| |||| ||| | || |||||||| ||||||||||| |||    ||  ||||||||||| ||||| | ||||||||||| ||    
T  5270723 ctcacatcaatgaaatttatattcatggtgaaaatatcaatgacaaccaataacaaaa----aaaaaccacaagcaacaacaatagatctagatctaatc 5270628  T
Q  271 tagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaaca 318  Q
    ||| || |||||| |  | |||||||||||| |||||||| |||||||    
T  5270627 tagcaaccaagtgtaatgcaaaaccacaatcgaaccaaagaataaaca 5270580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 467
Target Start/End: Original strand, 4075480 - 4075581
Alignment:
Q  367 agttcggtccaacaatgacctac-tctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaaaattagttacaagaa 463  Q
    ||||||| ||||||||||||||| ||||| ||||||  |||||||||||||||||||| || ||||| ||||||||| |||||||||   ||||||||||    
T  4075480 agttcggcccaacaatgacctacatctgggggagag--tgatctctccaatccactatcaaagagtttcttacaaagtgatacaaaagaggttacaagaa 4075577  T
Q  464 atta 467  Q
    ||||    
T  4075578 atta 4075581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 423
Target Start/End: Original strand, 27305720 - 27305775
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat 423  Q
    |||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  27305720 agttcggtccaa-attgacctactttggaggagagattgatctctccaatccactat 27305775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 3617618 - 3617540
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  3617618 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 3617540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 377 - 420
Target Start/End: Original strand, 5433901 - 5433944
Alignment:
Q  377 aacaatgacctactctggaggagagattgatctctccaatccac 420  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  5433901 aacaatgacctactatggaggagagattgatctctccaatccac 5433944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 25637586 - 25637517
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  25637586 agttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 25637517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 31340268 - 31340320
Alignment:
Q  424 aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||||||||| |||| ||||||| |||||||||||||||||    
T  31340268 aatgagttcttacaaagagatac-aaatgagttacatgaaattagcttcaacaa 31340320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 419
Target Start/End: Complemental strand, 39127745 - 39127656
Alignment:
Q  330 gtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatcca 419  Q
    |||||||||| | || || | ||||||| ||| ||  ||||| ||||||||||||||| ||||||||||||||||||||| || ||||||    
T  39127745 gtagagaaaaaagaataatatcaagaaaagtttattaagttcagtccaacaatgacctgctctggaggagagattgatctttcaaatcca 39127656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 23391919 - 23392028
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| ||||||||| |||||| ||||||||||| || |||||||| ||||| ||||| ||||  ||||||||||||    
T  23391919 agttcggtccaact-tgacctaatttgggggagagatttatctctacaatccactatcaaagagttcttgcaaagtgatac-aaatgggttacaagaaat 23392016  T
Q  466 tagcttcaacaa 477  Q
    || ||| |||||    
T  23392017 tatcttaaacaa 23392028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Original strand, 4598532 - 4598601
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  4598532 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 4598601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 10056378 - 10056309
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10056378 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10056309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 10058600 - 10058531
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10058600 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10058531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 10060822 - 10060753
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10060822 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10060753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 10063044 - 10062975
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10063044 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10062975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 10065266 - 10065197
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10065266 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10065197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 10211554 - 10211485
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10211554 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10211485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 423
Target Start/End: Original strand, 2075065 - 2075140
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat 423  Q
    ||||| ||||||||| | | |||||| ||||||  ||||||||||| | ||||||||||||||||| ||||||||||    
T  2075065 acacccagaaatgtttacccagttcgatccaact-tgacctactctcggggagagattgatctctcaaatccactat 2075140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 467
Target Start/End: Original strand, 51352150 - 51352219
Alignment:
Q  397 gagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaatta 467  Q
    |||||||||||||||| |||||||| | |||||||| ||||||||| |||||||  | ||||||||||||||    
T  51352150 gagagattgatctctcaaatccactctcaatgagttattacaaagaaatacaaa--tggttacaagaaatta 51352219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 434
Target Start/End: Complemental strand, 10209319 - 10209265
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10209319 tgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10209265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 434
Target Start/End: Original strand, 4600753 - 4600822
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   ||||||||||| |||||||| |||  ||||||||||||||||  |||||||||||    
T  4600753 agttcggtccaaacttgacctactctagaggagagtttgtactctccaatccactatcaaatgagttctt 4600822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 1683824 - 1683768
Alignment:
Q  172 ctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaa 228  Q
    ||||||||||||||||||||||  ||||  |||  ||||||| ||||||||||||||    
T  1683824 ctcacatcaatgaaatttagatgtgtgggacaaacatcaatgacaaccaataaccaa 1683768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 449
Target Start/End: Original strand, 23410353 - 23410421
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaa 449  Q
    ||||||| | ||| ||||||||| |||||||||||||| |||  | |||||||||||||| ||||||||    
T  23410353 tgacctaatttgggggagagatttatctctccaatccattatctaagagttcttacaaagtgatacaaa 23410421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 437 - 477
Target Start/End: Complemental strand, 24635345 - 24635306
Alignment:
Q  437 aaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  24635345 aaagagatacaaaat-agttacaaaaaattagcttcaacaa 24635306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 186; Significance: 1e-100; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 146 - 477
Target Start/End: Original strand, 27637403 - 27637732
Alignment:
Q  146 ttgtgaattcggactcaaatt-caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaa 244  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| || ||| ||||||| ||||||   |||||    
T  27637403 ttgtgaattcggtctcaaatttcaaacctcacatcaatgaaatttaaattcgtggagcaagtattaatggtaatcaacaaccaaaagtaaat---cacaa 27637499  T
Q  245 gcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataa 344  Q
    |||| ||||||||| |||| |||||||| ||| ||||||||||| |||||||||||| ||| || | |||||||||||       ||| |||||||||||    
T  27637500 gcaacaacaacaatatagacctagtctataaaccaagtgcatagcaaaaccacaatccaactaaggaataaacaagataaagagagtaaagaaaagataa 27637599  T
Q  345 caacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaaagagat 444  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27637600 caacaccaagaaatattcacccagttcggtccaacaatgacctactctgcaggagagattgatctctccaatccactataatgagttcttacaaagagat 27637699  T
Q  445 acaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||  ||||||||||||||| || |||||    
T  27637700 acaaaatgggttacaagaaattagtttaaacaa 27637732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 199 - 477
Target Start/End: Complemental strand, 213795 - 213514
Alignment:
Q  199 gagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccaca 298  Q
    |||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||||| |||| ||||||||  ||  |||||||||| |||||||||    
T  213795 gagcaagtatcaatagcaatcaataaccaaatgtaaaaaaccacaagcaataacaacaatatagacctagtctattaactaagtgcatagcaaaaccaca 213696  T
Q  299 atctaaccaaagga-taaacaagatnnnnnnng--tagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgga 395  Q
    ||| ||   ||||| ||||||||||       |  || || ||||||||||||||||||||||||||| | ||||||||||||   ||||||||| ||||    
T  213695 atcaaaagcaaggaataaacaagataaagagagagtaaaggaaagataacaacaccaagaaatgttcacccagttcggtccaaacttgacctactatgga 213596  T
Q  396 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||    
T  213595 ggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagctttaacaa 213514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 276 - 477
Target Start/End: Complemental strand, 40147510 - 40147310
Alignment:
Q  276 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtc 375  Q
    ||||||||||||  |||||||||||  ||||||||||||||||||||       ||| ||||||||||| ||||| || ||||||||| | |||||||||    
T  40147510 aacaagtgcataacaaaaccacaattcaaccaaaggataaacaagataaatagagtaaagaaaagataaaaacacaaaaaaatgttcacccagttcggtc 40147411  T
Q  376 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 474  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  40147410 caact-tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaa 40147313  T
Q  475 caa 477  Q
    |||    
T  40147312 caa 40147310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 167 - 477
Target Start/End: Complemental strand, 317121 - 316811
Alignment:
Q  167 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaa----tctag 262  Q
    |||| ||||||||||||||||||||||||||||  ||||||||| || |||||||||||||||     || ||||||||||| |||||| |    |||||    
T  317121 caaatctcacatcaatgaaatttagattcgtgggacaagtatcagtgacaaccaataaccaaa-----ataaccacaagcaacaacaacgacagatctag 317027  T
Q  263 atctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttc 362  Q
    ||||  ||||| || |||||| | || |||||||||||  |||||||| |||||||| ||       |||| ||||||| |||||||| ||||| ||||     
T  317026 atcttatctagcaaccaagtgtaaagcaaaaccacaattgaaccaaagaataaacaaaataaagagagtagggaaaagagaacaacacaaagaattgttt 316927  T
Q  363 atctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaa 460  Q
    | | |||||||||||||||||||||||||| | ||||||||||||| |||| ||||| ||| ||||||||| ||||||||||||||||||  | ||||||    
T  316926 accaagttcggtccaacaatgacctactctaggggagagattgatccctccgatccattatcaatgagttctttacaaagagatacaaaagga-ttacaa 316828  T
Q  461 gaaattagcttcaacaa 477  Q
    |||||||||||||||||    
T  316827 gaaattagcttcaacaa 316811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 196 - 477
Target Start/End: Complemental strand, 5058375 - 5058094
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaa--tgtaaattaccacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaa 291  Q
    ||||| |||||||||||||||||||| |||||||  ||| ||   |||||||||| ||||||||| ||  || |||||||| ||  ||||||||||| ||    
T  5058375 gtggaacaagtatcaatggcaaccaacaaccaaaaatgttaa---ccacaagcaacaacaacaatatatagacctagtctataat-caagtgcatagtaa 5058280  T
Q  292 aaccacaatctaaccaaagga-taaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctact 390  Q
    ||||| |||| ||   ||||| ||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||  |||||||||    
T  5058279 aaccataatccaaagcaaggaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctact 5058181  T
Q  391 ctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  | ||||||||| ||||||||||||    
T  5058180 ctagaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggatacaagaaaatagcttcaacaa 5058094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 144 - 477
Target Start/End: Original strand, 16640737 - 16641056
Alignment:
Q  144 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 242  Q
    ||||||||||||||||   ||||| |||| |||| ||||| || ||||||||||||||||||||||||||  ||||||          | |||| |||||    
T  16640737 tgttgtgaattcggac---aattctaaacttcacgtcaataaattttagattcgtggagcaagtatcaataacaacca----------gaaaataaccac 16640823  T
Q  243 aagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngt--agagaaaag 340  Q
    |||||| ||||| ||||||||| || |||||||| ||| ||||||  ||||||||||| |||| |||| |||| ||||||       |   | |||||||    
T  16640824 aagcaacaacaaaaatctagatttaatctagaaatcaaatgcataacaaaaccacaatttaactaaagaataagcaagataaatagagagcaaagaaaag 16640923  T
Q  341 ataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaaag 440  Q
    ||||||||||||||||||||| | | ||||||| || ||  |||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  16640924 ataacaacaccaagaaatgtttacccagttcggccctact-tgacctactctggaggagagattgatctctccaatccactatca--agttcttacaaag 16641020  T
Q  441 agatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||  |||||  |||||| |||||||||||    
T  16641021 agatacaaaa-gagttatcagaaatcagcttcaacaa 16641056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 347 - 477
Target Start/End: Complemental strand, 13239930 - 13239800
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    ||||||| || |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13239930 acaccaaaaattgttcacccagttcggtccaaatttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagata 13239831  T
Q  446 caaaattagttacaagaaattagcttcaacaa 477  Q
    |||||  |||||||||||||||||||||||||    
T  13239830 caaaa-gagttacaagaaattagcttcaacaa 13239800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 347 - 477
Target Start/End: Complemental strand, 28278494 - 28278365
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    |||||||||| |||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  28278494 acaccaagaattgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatgagtttttacaaagagata 28278396  T
Q  446 caaaattagttacaagaaattagcttcaacaa 477  Q
    | ||||  ||||||||||||||||||||||||    
T  28278395 c-aaatgggttacaagaaattagcttcaacaa 28278365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 196 - 449
Target Start/End: Complemental strand, 27015848 - 27015599
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagat--ctagtctagaaaacaagtgcatagaaaaa 293  Q
    ||||||||||||| |||||||| ||| ||||||| ||||||   ||||||||| ||||||||| || ||  |||||||| ||  ||||||||||  ||||    
T  27015848 gtggagcaagtattaatggcaatcaacaaccaaa-gtaaat---cacaagcaacaacaacaatatatatacctagtctataat-caagtgcatatcaaaa 27015754  T
Q  294 ccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctg 393  Q
    |||||||  |||||||| |||||||||||       ||| |||||| |||||| |||||| ||||||||| | |||||||||||||  ||||||| | ||    
T  27015753 ccacaattcaaccaaagcataaacaagataaagagagtaaagaaaaaataaca-caccaaaaaatgttcacccagttcggtccaact-tgacctattttg 27015656  T
Q  394 gaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaa 449  Q
    |||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||    
T  27015655 gaggagagattgatctgtacaatccactatcaatgagttcttacaaagagatacaaa 27015599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 347 - 477
Target Start/End: Complemental strand, 16452258 - 16452129
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    ||||||||||||||| | | |||||||||||||  ||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  16452258 acaccaagaaatgtttacccagttcggtccaact-tgacctactctgggggagagatttatctctccaatccactatgaatgagttcttacaaagagata 16452160  T
Q  446 caaaattagttacaagaaattagcttcaacaa 477  Q
    | ||||  ||||||||||||||||||||||||    
T  16452159 c-aaatgggttacaagaaattagcttcaacaa 16452129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 358 - 467
Target Start/End: Complemental strand, 37439309 - 37439200
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||    
T  37439309 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagtt 37439211  T
Q  457 acaagaaatta 467  Q
    |||||||||||    
T  37439210 acaagaaatta 37439200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 382 - 471
Target Start/End: Complemental strand, 25412904 - 25412815
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 471  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||    
T  25412904 tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaattagctt 25412815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 347 - 477
Target Start/End: Original strand, 9049332 - 9049461
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    ||||||| ||||||| ||| | |||||||||||  | ||||||| ||| ||||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  9049332 acaccaaaaaatgtttatccatttcggtccaact-tcacctactttgggggagatattgatctctccaatccactgtcaatgagttcttacaaagagata 9049430  T
Q  446 caaaattagttacaagaaattagcttcaacaa 477  Q
    ||||| | ||||||||||||||||||||||||    
T  9049431 caaaa-tggttacaagaaattagcttcaacaa 9049461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 13488361 - 13488252
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  13488361 agttcggtccaact-tgacctaatctcggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 13488264  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  13488263 tagcttcaacaa 13488252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 42428440 - 42428549
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  42428440 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 42428537  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  42428538 tagcttcaacaa 42428549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 334 - 424
Target Start/End: Complemental strand, 4160791 - 4160701
Alignment:
Q  334 agaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactata 424  Q
    ||||||||||||||||| || |||| || | | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4160791 agaaaagataacaacactaataaatatttacccagtttggtccaacaatgacctactctggaggagagattgatctctccaatccactata 4160701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 13343228 - 13343116
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||  |||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||  | ||    
T  13343228 tgttcacccagttcggtccaaacatgacctactctggaggagagattgaactctccaatccactatcaatgagttctt-caaagagatacaaaagga-tt 13343131  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  13343130 acaagaaattagctt 13343116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 36074043 - 36074155
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||||| ||||||||||||   ||||||||| ||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||  ||||    
T  36074043 tgttcatccagttcggtccaaacttgacctactttggaggagagattgaactctccaatccactatcaatgagttctt-caaagagatacaaaa-gagtt 36074140  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  36074141 acaagaaattagctt 36074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 191 - 307
Target Start/End: Complemental strand, 40751308 - 40751195
Alignment:
Q  191 gattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaa 290  Q
    |||| |||||| ||||||||||| |||||||||||||||||||||   |||||||||||||||||||| |||| ||| |||| ||| ||||||||||| |    
T  40751308 gatttgtggagtaagtatcaatgacaaccaataaccaaatgtaaa---ccacaagcaataacaacaatatagacctaatctataaaccaagtgcatagca 40751212  T
Q  291 aaaccacaatctaacca 307  Q
    |||||||||| ||||||    
T  40751211 aaaccacaatttaacca 40751195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 358 - 477
Target Start/End: Complemental strand, 538192 - 538074
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||| ||| |||||||||||||  ||||||| | ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||  |||    
T  538192 tgttgatccagttcggtccaact-tgacctaatatgggggagagattgatctctccaatctactatcaatgagttcttacaaagagatac-aaatgggtt 538095  T
Q  457 acaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||    
T  538094 acaagaaattagcttcaacaa 538074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 358 - 468
Target Start/End: Original strand, 9789224 - 9789335
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  9789224 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gagt 9789322  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  9789323 tacaagaaattag 9789335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 358 - 468
Target Start/End: Complemental strand, 16409643 - 16409532
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  16409643 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gagt 16409545  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  16409544 tacaagaaattag 16409532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 358 - 468
Target Start/End: Complemental strand, 26178050 - 26177939
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  26178050 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gagt 26177952  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  26177951 tacaagaaattag 26177939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 30182756 - 30182643
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||||| ||||||||||||   |||| |||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||| ||||   |||    
T  30182756 tgttcatccagttcggtccaaacttgacatactctggaggagagattgaactctccaatccactatcaatgagttcttccaaagagatagaaaa-gggtt 30182658  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  30182657 acaagaaattagctt 30182643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 32636982 - 32636879
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||||    
T  32636982 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaaagagttcttacaaagagatac-aaatgggttacaagaaat 32636885  T
Q  466 tagctt 471  Q
    ||||||    
T  32636884 tagctt 32636879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 365 - 477
Target Start/End: Original strand, 42426243 - 42426354
Alignment:
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 463  Q
    ||||||| |||||||  ||||||| || || |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||| ||||||    
T  42426243 ctagttcagtccaact-tgacctaatcagggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttgcaagaa 42426340  T
Q  464 attagcttcaacaa 477  Q
    ||||||||||||||    
T  42426341 attagcttcaacaa 42426354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 358 - 468
Target Start/End: Original strand, 18441648 - 18441759
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  18441648 tgttcacccagttcggtccaaacttgacctactctagaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gagt 18441746  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  18441747 tacaagaaattag 18441759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 533927 - 533818
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||  ||||||| ||||    
T  533927 agttcggtccaact-tgacctaatatgggggagagattgatctttccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaaaaaat 533830  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  533829 tagcttcaacaa 533818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 30682932 - 30683043
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgag--ttcttacaaagagatacaaaattagttacaagaa 463  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||  |||||||||||| ||||||||   ||||||||||    
T  30682932 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagtattcttacaaagaaatacaaaa-gggttacaagaa 30683029  T
Q  464 attagcttcaacaa 477  Q
    ||||||||||||||    
T  30683030 attagcttcaacaa 30683043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 396 - 477
Target Start/End: Original strand, 39468587 - 39468668
Alignment:
Q  396 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  39468587 ggagagattgatctctctaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaa 39468668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 365 - 477
Target Start/End: Original strand, 8565954 - 8566065
Alignment:
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 463  Q
    |||||||||||||||  ||||||| |||||  ||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||  ||||||||||    
T  8565954 ctagttcggtccaact-tgacctaatctgggtgagagattgatctctccaatccactatcaatgagttcttacagagggatac-aaatgggttacaagaa 8566051  T
Q  464 attagcttcaacaa 477  Q
    |||||||| |||||    
T  8566052 attagcttaaacaa 8566065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 172 - 477
Target Start/End: Original strand, 10054633 - 10054935
Alignment:
Q  172 ctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaa-tctagatctagtc 270  Q
    |||| |||||||||||||||||| || |  |||||||||||| |||| ||||| ||||     || |||||| |||| | |||||| |||||||||| ||    
T  10054633 ctcatatcaatgaaatttagatttgtaggacaagtatcaatgacaactaataatcaaa-----ataaccacatgcaacatcaacaaatctagatctaatc 10054727  T
Q  271 tagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaat-gttcatctagt 369  Q
    ||| || |||||| | || ||||  |||||| || ||||  |||||||||||       ||| ||||||   |||||||||||  | | ||| | |||||    
T  10054728 tagcaaccaagtgtaaagcaaaattacaatcgaagcaaaaaataaacaagataaaaagagtacagaaaatggaacaacaccaaagagtcgtttacctagt 10054827  T
Q  370 tcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaatta 467  Q
    | ||||||||||| ||| ||| ||| ||||| |||||| |||||||| |||||| ||||||||| ||||||||||||||||||   |||| |||||||||    
T  10054828 ttggtccaacaattacccactttgggggagatattgatatctccaatacactatcaatgagttcattacaaagagatacaaaa--ggttataagaaatta 10054925  T
Q  468 gcttcaacaa 477  Q
    ||||||||||    
T  10054926 gcttcaacaa 10054935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 369 - 477
Target Start/End: Original strand, 28750667 - 28750774
Alignment:
Q  369 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaatta 467  Q
    |||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||  |||||| |||||||    
T  28750667 ttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaaaagatac-aaatgggttacaggaaatta 28750764  T
Q  468 gcttcaacaa 477  Q
     |||||||||    
T  28750765 acttcaacaa 28750774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 196 - 307
Target Start/End: Complemental strand, 40763308 - 40763200
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 295  Q
    |||||||||||||||||| |||||||||| ||||||||||   ||| |||||||||||||||| |||| ||| |||| ||| ||||||||||| ||||||    
T  40763308 gtggagcaagtatcaatgacaaccaataatcaaatgtaaa---ccataagcaataacaacaatatagacctaatctataaaccaagtgcatagcaaaacc 40763212  T
Q  296 acaatctaacca 307  Q
    | ||| ||||||    
T  40763211 ataatttaacca 40763200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 347 - 477
Target Start/End: Original strand, 13695680 - 13695810
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagttc-ttacaaagagat 444  Q
    ||||||||||||||| | |||||| |||||||   ||||||||| ||||||||||| | ||||||| ||||||||| |||||||||| ||||||||||||    
T  13695680 acaccaagaaatgtttacctagtttggtccaagt-tgacctactatggaggagagaataatctctctaatccactattaatgagttctttacaaagagat 13695778  T
Q  445 acaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||   |||||||||||||||||| |||||    
T  13695779 acaaaa-gggttacaagaaattagctttaacaa 13695810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 382 - 477
Target Start/End: Complemental strand, 33831824 - 33831729
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| | ||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||    
T  33831824 tgacctaatatgggggagagattgatctcttcaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttaaacaa 33831729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 386 - 477
Target Start/End: Original strand, 42309963 - 42310054
Alignment:
Q  386 ctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||| ||| ||||||||||||||| | |||||||||| ||| |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  42309963 ctactatgggggagagattgatctcgctaatccactatcaataagttcttacaaagagatacaaaag-agttacaagaaattagcttcaacaa 42310054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 10593426 - 10593312
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 454  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  10593426 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 10593329  T
Q  455 ttacaagaaattagctt 471  Q
    |||||||||||||||||    
T  10593328 ttacaagaaattagctt 10593312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 26170930 - 26170848
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 439  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  26170930 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaa 26170848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 477
Target Start/End: Complemental strand, 38747135 - 38747054
Alignment:
Q  396 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||||||||| |||| |||||||| || |||||||||||||| |  ||||||||||||||||||||||||    
T  38747135 ggagagattgatctctccaatcctctatcaatgagtttttccaaagagatacaaa-tgggttacaagaaattagcttcaacaa 38747054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 358 - 468
Target Start/End: Complemental strand, 29722692 - 29722582
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  29722692 tgttcacccagttcggtccaaatttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 29722595  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  29722594 tacaagaaattag 29722582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 358 - 468
Target Start/End: Original strand, 29751160 - 29751270
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  29751160 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 29751257  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  29751258 tacaagaaattag 29751270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 370 - 477
Target Start/End: Original strand, 33906042 - 33906150
Alignment:
Q  370 tcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaatta 467  Q
    ||||||||||| ||||||||||| | | |||||||||||| ||||||| ||||| ||||||||| ||||||||||||||||||  | ||||||||| |||    
T  33906042 tcggtccaacattgacctactctagggaagagattgatctttccaatctactatcaatgagttctttacaaagagatacaaaagga-ttacaagaagtta 33906140  T
Q  468 gcttcaacaa 477  Q
    ||||| ||||    
T  33906141 gcttcgacaa 33906150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 22536290 - 22536403
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||| |||||||||||| || |||||||||| |||| |||||||||   ||    
T  22536290 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactccccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 22536387  T
Q  456 tacaagaaattagctt 471  Q
    ||||||||||||||||    
T  22536388 tacaagaaattagctt 22536403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 31183129 - 31183021
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| |||||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||  | ||||||||||||    
T  31183129 agttcggtccaact-tgacctaatatgggggagagatagatctctccaatccagtatcaatgagttcttacaaagggatacaaa--tggttacaagaaat 31183033  T
Q  466 tagcttcaacaa 477  Q
    || ||| |||||    
T  31183032 taacttaaacaa 31183021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 473
Target Start/End: Original strand, 3075648 - 3075773
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    ||||||||||||||||| | | || ||||||||  ||||||||| ||  ||||||||||||||||||||| |||||| || || |||||||||| |||||    
T  3075648 acaccaagaaatgttcacccaatttggtccaact-tgacctactatgagggagagattgatctctccaattcactatcaacgaattcttacaaaaagata 3075746  T
Q  446 caaaattagttacaagaaattagcttca 473  Q
    | ||||  ||||||||||||||| ||||    
T  3075747 c-aaatgggttacaagaaattagattca 3075773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 451
Target Start/End: Complemental strand, 30793314 - 30793210
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagat 444  Q
    ||||||||||||||| | || |||||||||||||||||| |||||| | |||||||  |||||||||| | |||||| ||| ||||| ||||||||||||    
T  30793314 acaccaagaaatgtttaccttgttcggtccaacaatgacttactctaggggagaga--gatctctccacttcactatcaattagttctttacaaagagat 30793217  T
Q  445 acaaaat 451  Q
    |||||||    
T  30793216 acaaaat 30793210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 468
Target Start/End: Complemental strand, 29720532 - 29720422
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||| ||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  29720532 tgttcacccagttcggtccaaacttgacctactctagaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 29720435  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  29720434 tacaagaaattag 29720422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 424 - 477
Target Start/End: Complemental strand, 42926968 - 42926916
Alignment:
Q  424 aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  42926968 aatgagttcttacaaagagatacaaa-tgagttacaagaaattagcttcaacaa 42926916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 25078289 - 25078211
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  25078289 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 25078211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 25136258 - 25136180
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  25136258 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 25136180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 40380259 - 40380181
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||| ||||||||||||||||  |||||||||||    
T  40380259 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgaactctccaatccactatcaaatgagttctt 40380181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 40382470 - 40382392
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||| ||||||||||||||||  |||||||||||    
T  40382470 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgaactctccaatccactatcaaatgagttctt 40382392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 449
Target Start/End: Complemental strand, 42927069 - 42926967
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 445  Q
    ||||||||||||||| | | |||||||||||||  ||||||||| ||   |||||||| || ||| ||||||||| | ||||||||||||||||||||||    
T  42927069 acaccaagaaatgtttacccagttcggtccaact-tgacctactatgagagagagatttatttcttcaatccactgtcaatgagttcttacaaagagata 42926971  T
Q  446 caaa 449  Q
    ||||    
T  42926970 caaa 42926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 377 - 477
Target Start/End: Complemental strand, 3326063 - 3325962
Alignment:
Q  377 aacaatgacctactctggaggagagattgatctctccaatccactataat-gagttctt-acaaagagatacaaaattagttacaagaaattagcttcaa 474  Q
    |||||||||||||| ||   |||| ||||||||||| ||||||| || || |||||||| ||||||||||||| |||  |||||||||||||||||||||    
T  3326063 aacaatgacctactatgtgagagatattgatctctctaatccaccatcattgagttctttacaaagagatacacaatg-gttacaagaaattagcttcaa 3325965  T
Q  475 caa 477  Q
    |||    
T  3325964 caa 3325962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 19806521 - 19806466
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat 423  Q
    |||||||||||||  ||||||| ||||| ||||||||||||||||||||||||||||    
T  19806521 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactat 19806466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 16544568 - 16544499
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  16544568 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 16544499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 16546790 - 16546721
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  16546790 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 16546721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 4160945 - 4160885
Alignment:
Q  167 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataacca 227  Q
    |||| |||||||||||  ||||||||||  ||| ||||||||||||| |||||||||||||    
T  4160945 caaatctcacatcaatataatttagatttatggggcaagtatcaatgacaaccaataacca 4160885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 8446039 - 8445995
Alignment:
Q  174 cacatcaatgaaatttagattcgtggagcaagtatcaatggcaac 218  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||    
T  8446039 cacatcaatgaaatttagatttgtgggacaagtatcaatggcaac 8445995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 30793469 - 30793418
Alignment:
Q  175 acatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataacc 226  Q
    |||||||| | |||||||||||||| ||||| |||||||||| |||||||||    
T  30793469 acatcaataatatttagattcgtggggcaagcatcaatggcacccaataacc 30793418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 477
Target Start/End: Original strand, 10700581 - 10700767
Alignment:
Q  290 aaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaa-gaaatgttcatctagttcggtccaacaatgaccta 388  Q
    |||||||||||| || ||||| |||| ||||||       |||||||||||| |||||||| || ||| | || |   ||||||||  ||||||||||||    
T  10700581 aaaaccacaatcaaatcaaagaataagcaagataaagagcgtagagaaaagagaacaacacgaaagaattatttactcagttcggtgaaacaatgaccta 10700680  T
Q  389 ctctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    || ||| |||||||  |||||||||| | |||||| ||||||||| ||  |||||||||||||| | |||| ||| |||||||||||||||    
T  10700681 ctatgggggagaga--gatctctccacttcactatcaatgagttctttttaaagagatacaaaaat-gttataag-aattagcttcaacaa 10700767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 33905837 - 33905895
Alignment:
Q  167 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataac 225  Q
    |||| |||||| |||| ||||||||||| ||| | |||||||||||| |||||||||||    
T  33905837 caaatctcacaccaattaaatttagatttgtgaaacaagtatcaatgacaaccaataac 33905895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 477
Target Start/End: Original strand, 14689503 - 14689546
Alignment:
Q  433 ttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||| || |||||| ||||||||||||||||    
T  14689503 ttacaaagagatacaaaaata-ttacaaaaaattagcttcaacaa 14689546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 167; Significance: 3e-89; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 200 - 477
Target Start/End: Original strand, 17845 - 18122
Alignment:
Q  200 agcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaa 299  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  17845 agcaagtatcaatagcaaccaataatcaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaaatgcatagcaaaaccacaa 17944  T
Q  300 tctaaccaaagg-ataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggagga 398  Q
    |||||||||||| |||||||||||       ||| |||||||||||||||||||||||||||||| | |||||| |||||   |||||||| ||||||||    
T  17945 tctaaccaaaggaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcgatccaaacttgacctaccctggagga 18044  T
Q  399 gagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| |||| |||||||||||||||||||||||||    
T  18045 gagattgatctctccaatccactatcaatgagtt-ttacaaagagatac-aaatgagttacaagaaattagcttcaacaa 18122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 162; Significance: 3e-86; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 144 - 477
Target Start/End: Complemental strand, 7451500 - 7451167
Alignment:
Q  144 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 243  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||   ||| ||| ||||||    
T  7451500 tgttgtgaattcggactcaaatccaaatctcacatcaatgaaatttagattcgtggagcaagtttcaatgacaaccaataacctcttgtcaataaccaca 7451401  T
Q  244 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagat--nnnnnnngtagagaaaaga 341  Q
    |||||||||||||||||||||||| |||||||||||||||||||  |||||||||||| |||||||| |||||||||||         |||||||||| |    
T  7451400 agcaataacaacaatctagatctaatctagaaaacaagtgcataacaaaaccacaatcgaaccaaagaataaacaagataaagagagagtagagaaaa-a 7451302  T
Q  342 ta-acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 439  Q
    || |||||||||| ||||||||| | ||||| |||||||  ||||||||| | |||||||||||||||||| ||||||||||| |||||||| |||||||    
T  7451301 tagacaacaccaataaatgttcacccagttc-gtccaac-ttgacctactgtagaggagagattgatctctgcaatccactatcaatgagttattacaaa 7451204  T
Q  440 gagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| |||| | |||||||||||||||||||||||    
T  7451203 gagatac-aaatgaattacaagaaattagcttcaacaa 7451167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 143 - 432
Target Start/End: Complemental strand, 17450957 - 17450671
Alignment:
Q  143 atgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattacca 241  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||  ||||||||||||| ||||| ||||||||||||||||   ||    
T  17450957 atgttgtgaattcggtctcaaattctaaacctcacaccaatgaaatttagattcgtgacgcaagtatcaatgacaaccgataaccaaatgtaaat---ca 17450861  T
Q  242 caagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaaga 341  Q
    ||||||| |||||||||||| | ||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||       ||| ||||||||    
T  17450860 caagcaacaacaacaatctaaacctaatctagaaaccaagtgcatagcaaaaccacaatctaaccaaaggataaacaagataaagagagtacagaaaaga 17450761  T
Q  342 taacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc 432  Q
    ||||||||||||  | |||||| |||||||||||||||  ||||||||||| | |||||||||||||||||||||||||||| |||||||||    
T  17450760 taacaacaccaaagattgttcacctagttcggtccaac-ttgacctactct-gtggagagattgatctctccaatccactatcaatgagttc 17450671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 187 - 477
Target Start/End: Original strand, 42287940 - 42288229
Alignment:
Q  187 tttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcat 286  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42287940 tttagattcgtgaagcaaatatcaatggcaaccaataaccaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaagtgcat 42288039  T
Q  287 agaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaa-tgttcatctagttcggtccaacaatgac 385  Q
    ||||||||||||||| |||||| | ||||||||| |       ||| ||||||||||||| |||||||||| | || | | |||||||||||||  ||||    
T  42288040 agaaaaaccacaatccaaccaaggaataaacaagttaaagagggtaaagaaaagataacagcaccaagaaattattgacccagttcggtccaac-ttgac 42288138  T
Q  386 ctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||| ||||| |||||||||||||||||||||||| ||| |||||| ||||||||||| |||| ||||  ||||||| ||||||||||||||||    
T  42288139 ctaatctgg-ggagagattgatctctccaatccattatcaatgagctcttacaaagaaatac-aaatgggttacaataaattagcttcaacaa 42288229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 196 - 477
Target Start/End: Complemental strand, 45727257 - 45726978
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaac 294  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||||| ||||| ||| |||| |||||||| |||  |||||||||| |||||    
T  45727257 gtggagcaagtatcaatggcaactaataaccaaatgtaaataaaccacaagcaacaacaataatatagacctagtctataaactaagtgcatagcaaaac 45727158  T
Q  295 cacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 394  Q
    ||||||| |||||||| |||||  ||||       ||| ||||||||||||||||| || ||||||||| | |||||||||||||  |||||||||||||    
T  45727157 cacaatccaaccaaagaataaa--agataaagagagtaaagaaaagataacaacactaaaaaatgttcacccagttcggtccaact-tgacctactctgg 45727061  T
Q  395 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  45727060 aggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaataggttacaagaaattagcttcaacaa 45726978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 144 - 477
Target Start/End: Complemental strand, 33648548 - 33648220
Alignment:
Q  144 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 243  Q
    |||||||||||||| |  |||| |||| |||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||| |||     || || ||     
T  33648548 tgttgtgaattcggtca-aaatccaaatctcatatcaatgaaatttagattcgtggagtaagaatcaatgacaaccaataacaaaa-----ataactacg 33648455  T
Q  244 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata 343  Q
    ||||| |||||||||||||  ||| |||| ||  ||||||||||| |||| ||||||  ||| |||| |||||||||||       |||||||||||| |    
T  33648454 agcaacaacaacaatctaggcctaatctataagccaagtgcatagcaaaatcacaattaaactaaagaataaacaagataaagagagtagagaaaagaca 33648355  T
Q  344 acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaaga 441  Q
    |||||||||| ||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||    
T  33648354 acaacaccaataaatgtttacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccgctatcaatgagttctttacaaaga 33648255  T
Q  442 gatacaaaattagttacaagaaattagcttcaacaa 477  Q
     ||||||||   |||||| |||||||||||||||||    
T  33648254 aatacaaaa-gggttacaggaaattagcttcaacaa 33648220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 35446726 - 35447003
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaaca--atctagatctagtctagaaaacaagtgcatagaaaaa 293  Q
    |||||||||||||||||  ||||||| ||||||| ||||   ||||||  ||| |||||||  || |||||||||||||  || ||||||||||| ||||    
T  35446726 gtggagcaagtatcaatcccaaccaacaaccaaa-gtaa---accacactcaacaacaacaatatatagatctagtcta-taatcaagtgcatagcaaaa 35446820  T
Q  294 ccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctg 393  Q
    |||||||  |||||||| |||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||  ||||||||||||    
T  35446821 ccacaattcaaccaaagcataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaac-ttgacctactctg 35446919  T
Q  394 gaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||| ||||||||    
T  35446920 gaggagagagtgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagattcaacaa 35447003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 196 - 477
Target Start/End: Original strand, 1631571 - 1631851
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaa 292  Q
    |||||| ||||||||||| ||||||| |||||||| ||||| | |||||||||||||||||||| ||  ||  |||||| | || |||||| |||| |||    
T  1631571 gtggagtaagtatcaatgacaaccaacaaccaaatataaataaaccacaagcaataacaacaatatatagacttagtct-gtaatcaagtgtatagcaaa 1631669  T
Q  293 accacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactct 392  Q
    ||||||||| ||  || | |||||||||||       | |  |||||||||||||||| ||||||| ||||   |||||||||||||  |||||||||||    
T  1631670 accacaatccaa--aaggaataaacaagataaagagagcaaggaaaagataacaacactaagaaatattcactcagttcggtccaact-tgacctactct 1631766  T
Q  393 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||| ||||||||||||||    
T  1631767 ggaggagagattgatttctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagatattagcttcaacaa 1631851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 255 - 477
Target Start/End: Complemental strand, 24398332 - 24398106
Alignment:
Q  255 caatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa---gataacaacacc 351  Q
    ||||||| ||||| ||||||||  |||||||||| |||||| |||||  ||||| |  ||||||||||       ||||||||||   ||||||||||||    
T  24398332 caatctaaatctaatctagaaactaagtgcatagcaaaaccgcaatcggaccaa-gactaaacaagataaagagagtagagaaaaatagataacaacacc 24398234  T
Q  352 aagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaa 448  Q
    ||| ||| ||||| | |||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  24398233 aagtaattgttcagccagttcggtccaacaatgacctactatgggggagagattgatctctccaatccattatcaatgagttctttacaaagagatacaa 24398134  T
Q  449 aattagttacaagaaattagcttcaacaa 477  Q
    ||   ||||||||||||||||||||||||    
T  24398133 aa-gggttacaagaaattagcttcaacaa 24398106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 2334427 - 2334537
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||| ||||||    
T  2334427 agttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagttactagaaat 2334525  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  2334526 tagcttcaacaa 2334537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 358 - 468
Target Start/End: Original strand, 36988076 - 36988186
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||    
T  36988076 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagtt 36988174  T
Q  457 acaagaaattag 468  Q
    ||||||||||||    
T  36988175 acaagaaattag 36988186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 6595015 - 6595125
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||   ||||||||||||    
T  6595015 agttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaacgagttcttacaaagagattcaaaa-gggttacaagaaat 6595113  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  6595114 tagcttcaacaa 6595125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 17057379 - 17057488
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| ||||    
T  17057379 agttcggtccaact-tgacctagtctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaaaaaat 17057476  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  17057477 tagcttcaacaa 17057488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 17085362 - 17085471
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| ||||    
T  17085362 agttcggtccaact-tgacctagtctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaaaaaat 17085459  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  17085460 tagcttcaacaa 17085471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 352 - 477
Target Start/End: Original strand, 17490143 - 17490267
Alignment:
Q  352 aagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaa 450  Q
    |||||||||| | | |||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  17490143 aagaaatgtttacccagttcggtccaa-attgacctactctaggggagagattgatctctacaatccactatcaatgagttcttacaaagagttacaaaa 17490241  T
Q  451 ttagttacaagaaattagcttcaacaa 477  Q
      |||||||||||||||||||||||||    
T  17490242 -gagttacaagaaattagcttcaacaa 17490267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 165 - 474
Target Start/End: Original strand, 30217858 - 30218161
Alignment:
Q  165 ttcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaat-ctaga 263  Q
    |||||| |||||||||||| |||||||||| |||||  || |||||| | |||||||||||||||     |  ||||||||||| || | || | |||||    
T  30217858 ttcaaatctcacatcaatggaatttagatttgtgga--aaatatcaacgacaaccaataaccaaa-----acaaccacaagcaacaaaatcatttctaga 30217950  T
Q  264 tctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttca 363  Q
    || | |||||||| |||||| | |  | |||||||||| |||||||| |||||||||||       |||||||||| | | | ||||||| ||||||| |    
T  30217951 tccaatctagaaaccaagtgtaaaacacaaccacaatcaaaccaaagaataaacaagataaagagagtagagaaaa-agagctacaccaaaaaatgttta 30218049  T
Q  364 tctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaaaattagttacaag 461  Q
     | ||||| ||||||||||||| |||||||| |||| ||||||||| | ||| ||||||| ||||| ||  |||||||||||||||||| | ||||||||    
T  30218050 ccgagttcagtccaacaatgacttactctgggggagtgattgatcttttcaacccactatcaatgaattatttacaaagagatacaaaa-tggttacaag 30218148  T
Q  462 aaattagcttcaa 474  Q
    |||||||||||||    
T  30218149 aaattagcttcaa 30218161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 36773720 - 36773611
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  |||| || ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||| |||| |||||||||||||    
T  36773720 agttcggtccaact-tgacataatctgggggagagattgatctctccaatccactatcaaagagttcttacaaagagatac-aaatgagttacaagaaat 36773623  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  36773622 tagcttcaacaa 36773611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 4503133 - 4503245
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||  ||||    
T  4503133 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttctt-caaagagatacaaaa-gagtt 4503230  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  4503231 acaagaaattagctt 4503245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 5723256 - 5723369
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   | ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  5723256 tgttcacccagttcggtccaaacttaacctactctagaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-aggtt 5723354  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  5723355 acaagaaattagctt 5723369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 45099922 - 45099810
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||  ||||    
T  45099922 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttctt-caaagagatacaaaa-gagtt 45099825  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  45099824 acaagaaattagctt 45099810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 723754 - 723863
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||    
T  723754 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaat 723851  T
Q  466 tagcttcaacaa 477  Q
    |||||| |||||    
T  723852 tagcttaaacaa 723863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 396 - 477
Target Start/End: Original strand, 7815311 - 7815392
Alignment:
Q  396 ggagagattgatctctccaatccactataa-tgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  7815311 ggagagattaatctctccaatccactataaatgagttcttacaaagagatacaaaa-gagttacaagaaattagcttcaacaa 7815392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 365 - 477
Target Start/End: Original strand, 33162458 - 33162569
Alignment:
Q  365 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 463  Q
    |||||||||||||||  ||||||| ||| | ||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||  ||||||||||    
T  33162458 ctagttcggtccaact-tgacctaatctaggggagagattgatctctctaatccactatcaatgagttcttacagagagatac-aaatgggttacaagaa 33162555  T
Q  464 attagcttcaacaa 477  Q
    ||||||||||||||    
T  33162556 attagcttcaacaa 33162569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 382 - 471
Target Start/End: Original strand, 4484354 - 4484444
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagttacaagaaattagctt 471  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||   ||||||||||||||||||    
T  4484354 tgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gggttacaagaaattagctt 4484444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 36318019 - 36318128
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  |||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||| ||||    
T  36318019 agttcggtccaact-tgacctactctaagggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaataaat 36318116  T
Q  466 tagcttcaacaa 477  Q
    ||| ||||||||    
T  36318117 tagtttcaacaa 36318128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 38312398 - 38312289
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  |||| || ||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||  ||||||||||||    
T  38312398 agttcggtccaact-tgacataatctgggggagagattgatctctccaatccactatcaatgagatcttacaaagagatac-aaatgggttacaagaaat 38312301  T
Q  466 tagcttcaacaa 477  Q
    ||| ||||||||    
T  38312300 tagtttcaacaa 38312289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 477
Target Start/End: Complemental strand, 26353341 - 26353233
Alignment:
Q  368 gttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaatt 466  Q
    ||||||||||||  |||||||||||   ||||||| |||||||||||||||||||| ||||||| |||||||| |||||||||| | |||||||||||||    
T  26353341 gttcggtccaact-tgacctactctaagggagagagtgatctctccaatccactatcaatgagtacttacaaaaagatacaaaagt-gttacaagaaatt 26353244  T
Q  467 agcttcaacaa 477  Q
    |||||||||||    
T  26353243 agcttcaacaa 26353233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 11067463 - 11067360
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||| ||||||| ||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  11067463 agttcggtccaact-tgacctaatctgggggagagattgatctcttcaatccattataaatgagttcttacaaagagatac-aaatgggttacaagaaat 11067366  T
Q  466 tagctt 471  Q
    ||||||    
T  11067365 tagctt 11067360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 29868027 - 29867924
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||||    
T  29868027 agttcggtccaact-tgacctaatttgggggagagattgatctctccaatccactatcaaagagttcttacaaagagatac-aaatgggttacaagaaat 29867930  T
Q  466 tagctt 471  Q
    ||||||    
T  29867929 tagctt 29867924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 369 - 421
Target Start/End: Complemental strand, 28672088 - 28672036
Alignment:
Q  369 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccact 421  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28672088 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccact 28672036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 358 - 468
Target Start/End: Complemental strand, 32289732 - 32289621
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||||||||| |||  ||||| ||||||||||||| ||||||||||||||  |||    
T  32289732 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctctaatttactatcaatgagttcttacaaaagagatacaaaa-gagt 32289634  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  32289633 tacaagaaattag 32289621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 382 - 477
Target Start/End: Complemental strand, 42362496 - 42362401
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||  |||||||||||||||||| |||||    
T  42362496 tgacctaatctgggggagagatagatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaattagcttaaacaa 42362401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 382 - 467
Target Start/End: Complemental strand, 30833490 - 30833404
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagttacaagaaatta 467  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||   ||||||||||||||    
T  30833490 tgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gggttacaagaaatta 30833404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 358 - 471
Target Start/End: Original strand, 36205665 - 36205777
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||||||||| ||||||| ||||||||||| || | ||||||||||| |||||||||||||||  ||||    
T  36205665 tgttcacccagttcggtccaaacttgacctactctggaggatagattgaactctccaatccgctgtcaatgagttctt-caaagagatacaaaa-gagtt 36205762  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  36205763 acaagaaattagctt 36205777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 14633835 - 14633945
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagttacaagaaa 464  Q
    |||||||||||||  ||||||| ||||| ||||||||||||||||||||||||||||  |||||||||||| |||| ||||| ||||  |||||||||||    
T  14633835 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatctatgagttcttacaaaagggatac-aaatgggttacaagaaa 14633932  T
Q  465 ttagcttcaacaa 477  Q
    ||||||| |||||    
T  14633933 ttagcttaaacaa 14633945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 34139780 - 34139890
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa-gagatacaaaattagttacaagaaa 464  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| | |||||| | |  |||||||||||    
T  34139780 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaaagggatacata-tgggttacaagaaa 34139877  T
Q  465 ttagcttcaacaa 477  Q
    ||||||| |||||    
T  34139878 ttagcttaaacaa 34139890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 347 - 477
Target Start/End: Original strand, 42019859 - 42019992
Alignment:
Q  347 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgag---ttcttacaaagag 442  Q
    |||||||||| |||| ||| | || ||||||||||| ||||||| ||| | ||||||||||||||| ||| |||||| ||||||   || ||||||||||    
T  42019859 acaccaagaagtgtttatccaatttggtccaacaataacctactatggggaagagattgatctctcaaattcactatcaatgagttttttttacaaagag 42019958  T
Q  443 atacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||  |||||||||||||||||||| ||||    
T  42019959 atacaaaa-gagttacaagaaattagcttctacaa 42019992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 11151601 - 11151710
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||| |||||||||||||||||||||  | |||||||||||||| ||||| ||||  ||||||||||||    
T  11151601 agttcggtccaact-tgacctaatctgggggagaggttgatctctccaatccactatctaagagttcttacaaagtgatac-aaatgggttacaagaaat 11151698  T
Q  466 tagcttcaacaa 477  Q
    |||||| |||||    
T  11151699 tagcttaaacaa 11151710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 358 - 468
Target Start/End: Complemental strand, 6266859 - 6266749
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  6266859 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 6266762  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  6266761 tacaagaaattag 6266749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 13656041 - 13656146
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttacaaa-gagatacaaaattagttacaagaa 463  Q
    ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||||||| | ||||||| |   ||||||||||    
T  13656041 agttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaagag--gttacaagaa 13656138  T
Q  464 attagctt 471  Q
    ||||||||    
T  13656139 attagctt 13656146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 477
Target Start/End: Complemental strand, 11049698 - 11049602
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||| | || ||||||||||||||| | ||||| ||||| ||||||||||||||||||||||| |||   |||| |||||||||||||||||||    
T  11049698 tgacctattatgaaggagagattgatcttttcaatctactatcaatgagttcttacaaagagatactaaaagggttataagaaattagcttcaacaa 11049602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 24398435 - 24398377
Alignment:
Q  167 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataac 225  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||| |||||||||||    
T  24398435 caaaccgcacattaatgaaatttagattcgtagagcaagtatcaatgacaaccaataac 24398377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 42261310 - 42261359
Alignment:
Q  172 ctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaa 221  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  42261310 ctcacgtcaatgaaatttagatttgtggagcaagtatcaatggcaaccaa 42261359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 358 - 477
Target Start/End: Complemental strand, 11690668 - 11690550
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||| ||| |||||||||||||  |||| || | ||| |||||| ||||||||||||||||||||| || || ||||||||||| ||||| ||||  |||    
T  11690668 tgttgatccagttcggtccaact-tgacgtaatatgggggagaggttgatctctccaatccactatcaacgatttcttacaaagggatac-aaatgggtt 11690571  T
Q  457 acaagaaattagcttcaacaa 477  Q
    ||||||||||||||| |||||    
T  11690570 acaagaaattagcttaaacaa 11690550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 392 - 477
Target Start/End: Complemental strand, 13121901 - 13121818
Alignment:
Q  392 tggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||| ||| ||||||||||| ||||||||  ||||||||||||||||    |||||||||||||| |||||||||    
T  13121901 tggaggagagattgatttcttcaatccactatcaatgagtttctacaaagagatacaaa---ggttacaagaaattatcttcaacaa 13121818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 434
Target Start/End: Original strand, 12647386 - 12647464
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  12647386 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 12647464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 431
Target Start/End: Complemental strand, 39284994 - 39284930
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt 431  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||    
T  39284994 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagtt 39284930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 477
Target Start/End: Original strand, 7597020 - 7597130
Alignment:
Q  366 tagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaa 463  Q
    |||||||||| ||||||||||||||||| ||||||||  |||||||||  || || || ||||||||| ||||||| ||||||||||  | |||||||||    
T  7597020 tagttcggtctaacaatgacctactctgaaggagaga--gatctctccgttctacaatcaatgagttctttacaaaaagatacaaaa-gacttacaagaa 7597116  T
Q  464 attagcttcaacaa 477  Q
    ||||| ||| ||||    
T  7597117 attagtttcgacaa 7597130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 14202450 - 14202495
Alignment:
Q  396 ggagagattgatctctccaatccactat-aatgagttcttacaaag 440  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||    
T  14202450 ggagagattgatctctccaatctactatcaatgagttcttacaaag 14202495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 42412161 - 42412121
Alignment:
Q  382 tgacctactctggaggagagattgatctctccaatccactat 423  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  42412161 tgacctactctgg-ggagagattgatctctccaatccactat 42412121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 477
Target Start/End: Complemental strand, 4561180 - 4561137
Alignment:
Q  433 ttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  4561180 ttacaaagagatacaaaaat-gttacaagaaattagcttcaacaa 4561137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 160; Significance: 4e-85; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 144 - 469
Target Start/End: Complemental strand, 10869 - 10546
Alignment:
Q  144 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 243  Q
    ||||||||||||||  |||| |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||||||| | |||| ||||||    
T  10869 tgttgtgaattcgg--tcaatttcaaacctcacatcaatgaaatttagatttgtggagaaagtatcaatgacaaccgataaccaaaagaaaataaccaca 10772  T
Q  244 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagat-nnnnnnngtagagaaaagat 342  Q
    ||||| ||||||||||||||| || |||||||| |||||| |||| ||||| ||||||||| ||||| |||||||||||        |||||| ||||||    
T  10771 agcaacaacaacaatctagatttaatctagaaatcaagtgtatagtaaaactacaatctaatcaaagaataaacaagataaaagagagtagaggaaagat 10672  T
Q  343 aacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaaga 441  Q
    ||||||||||||||||||| | | |||||||||||||  |||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  10671 aacaacaccaagaaatgtttacccagttcggtccaac-ttgacctactctggaggagagattgatctcttcaatccactatcaacgagttcttacaaaga 10573  T
Q  442 gatacaaaattagttacaagaaattagc 469  Q
    ||||||||| | ||||||| ||||||||    
T  10572 gatacaaaa-tggttacaataaattagc 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 131; Significance: 9e-68; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 196 - 477
Target Start/End: Complemental strand, 7654 - 7376
Alignment:
Q  196 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaaa 293  Q
    |||||||||||||||||||||||||| ||||||| |||||   |||||||||| ||||| ||| ||  || |||||||| ||| ||||||||||| ||||    
T  7654 gtggagcaagtatcaatggcaaccaacaaccaaa-gtaaa---ccacaagcaacaacaataatatatagacctagtctataaaccaagtgcatagcaaaa 7559  T
Q  294 ccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctg 393  Q
    |||||||  ||||||||||||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||  | |||||||||     
T  7558 ccacaattcaaccaaaggataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaac-ttaacctactcta 7460  T
Q  394 gaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  7459 gaggagagattgatctttccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaa 7376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0927 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 3377 - 3482
Alignment:
Q  144 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 242  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||    
T  3377 tgttgtgaattcggtctcaaattccaaacctcacatcaatgaaatttagattcatggagcaagtatcaatggcaaccaataactaaatgtaaataaccac 3476  T
Q  243 aagcaa 248  Q
    ||||||    
T  3477 aagcaa 3482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 11725 - 11612
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  11725 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaagagatac-aaatgagtt 11627  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  11626 acaagaaattagctt 11612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 355 - 477
Target Start/End: Original strand, 27439 - 27562
Alignment:
Q  355 aaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaaaatt 452  Q
    ||||||| | ||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||  |||||||||||||| ||||     
T  27439 aaatgtttacctaattcggtccaacaatgacctactatgggggagagattgatctctccaatccactatcaataagttatttacaaagagatac-aaatg 27537  T
Q  453 agttacaagaaattagcttcaacaa 477  Q
    |||||||||||||||||||||||||    
T  27538 agttacaagaaattagcttcaacaa 27562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 114770 - 114657
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||||| ||||||||| ||   | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  114770 tgttcatccagttcggtctaaacttaacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gcgtt 114672  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  114671 acaagaaattagctt 114657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 434701 - 434588
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||   |||    
T  434701 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 434603  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  434602 acaagaaattagctt 434588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 490145 - 490194
Alignment:
Q  172 ctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaa 221  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  490145 ctcacgtcaatgaaatttagatttgtggagcaagtatcaatggcaaccaa 490194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 20425 - 20534
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||  ||||||||||||    
T  20425 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccaatatcaaagagttcttacaaagagatac-aaatgggttacaagaaat 20522  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  20523 tagcttcaacaa 20534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Original strand, 149107 - 149216
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 465  Q
    |||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||  || |||||||||    
T  149107 agttcggtccaact-taacctactctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagata-taaatgggtaacaagaaat 149204  T
Q  466 tagcttcaacaa 477  Q
    ||||||||||||    
T  149205 tagcttcaacaa 149216  T

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Target: scaffold1519 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 1083 - 971
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 456  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| |||||||| || |||||||||||||||   |||    
T  1083 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttgtt-caaagagatacaaaa-gggtt 986  T
Q  457 acaagaaattagctt 471  Q
    |||||||||||||||    
T  985 acaagaaattagctt 971  T

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Target: scaffold0491 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 358 - 468
Target Start/End: Original strand, 8735 - 8846
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| || |||||||||| ||||||||||||||   ||    
T  8735 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaacgagttcttacaaaagagatacaaaa-gggt 8833  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  8834 tacaagaaattag 8846  T

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Target: scaffold0491; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 358 - 468
Target Start/End: Original strand, 11161 - 11272
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 455  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| || |||||||||| ||||||||||||||   ||    
T  11161 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaacgagttcttacaaaagagatacaaaa-gggt 11259  T
Q  456 tacaagaaattag 468  Q
    |||||||||||||    
T  11260 tacaagaaattag 11272  T

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Target: scaffold0674 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 434
Target Start/End: Original strand, 3735 - 3804
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  3735 agttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaaatgagttctt 3804  T

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Target: scaffold0565 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 434
Target Start/End: Original strand, 2604 - 2682
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  2604 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 2682  T

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Target: scaffold0349 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 4929 - 5002
Alignment:
Q  72 tgggaatccatttccatatcaactccatgcaaacaactaaaatatggact--aagaattatcccacatcatgta 143  Q
    ||||||||||||||||||||||||||||| |||  ||||| | || | ||  ||||||||||||||||||||||    
T  4929 tgggaatccatttccatatcaactccatgaaaaacactaataaataggctaaaagaattatcccacatcatgta 5002  T

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Target: scaffold0197 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 1291 - 1360
Alignment:
Q  253 aacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagat 322  Q
    ||||||||||||||| |||||||| |||||| | || |||||||||||| |||||||  ||||| |||||    
T  1291 aacaatctagatctaatctagaaaccaagtgtaaagtaaaaccacaatcaaaccaaaaaataaataagat 1360  T

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Target: scaffold0137 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 6432 - 6363
Alignment:
Q  367 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 434  Q
    ||||||||||||   | |||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  6432 agttcggtccaaacttaacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 6363  T

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Target: scaffold0477 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 402
Target Start/End: Original strand, 6981 - 7025
Alignment:
Q  358 tgttcatctagttcggtccaacaatgacctactctggaggagaga 402  Q
    |||| ||| |||||||||||| ||||||||||||| |||||||||    
T  6981 tgtttatccagttcggtccaataatgacctactctagaggagaga 7025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 477
Target Start/End: Original strand, 80351 - 80402
Alignment:
Q  425 atgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 477  Q
    ||||||||||||||| |||||| ||||  ||| ||||||||||||||||||||    
T  80351 atgagttcttacaaaaagatac-aaatgggttgcaagaaattagcttcaacaa 80402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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