View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10429_high_17 (Length: 221)

Name: NF10429_high_17
Description: NF10429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10429_high_17
NF10429_high_17
[»] chr1 (67 HSPs)
chr1 (13-204)||(23531705-23531902)
chr1 (101-190)||(5927355-5927444)
chr1 (46-184)||(48040418-48040560)
chr1 (42-171)||(48450550-48450672)
chr1 (99-171)||(398778-398850)
chr1 (98-186)||(1486721-1486809)
chr1 (101-165)||(18556471-18556535)
chr1 (101-193)||(21378531-21378622)
chr1 (42-120)||(2218264-2218347)
chr1 (101-180)||(14359537-14359614)
chr1 (42-193)||(35702542-35702689)
chr1 (42-159)||(22881567-22881689)
chr1 (99-171)||(6427324-6427396)
chr1 (101-165)||(46348398-46348462)
chr1 (99-186)||(10577748-10577835)
chr1 (42-144)||(13436459-13436562)
chr1 (40-90)||(5944365-5944415)
chr1 (42-88)||(21365992-21366038)
chr1 (42-88)||(22515827-22515873)
chr1 (101-163)||(22515902-22515964)
chr1 (41-164)||(35919225-35919359)
chr1 (42-92)||(37598900-37598950)
chr1 (99-193)||(39130780-39130874)
chr1 (42-92)||(46940748-46940798)
chr1 (112-181)||(1262848-1262917)
chr1 (47-193)||(3490352-3490497)
chr1 (44-172)||(25452108-25452234)
chr1 (40-137)||(28460776-28460873)
chr1 (40-92)||(1704933-1704985)
chr1 (105-169)||(21366039-21366103)
chr1 (101-193)||(31014995-31015087)
chr1 (43-170)||(9103615-9103741)
chr1 (42-77)||(9630561-9630596)
chr1 (99-170)||(34298411-34298482)
chr1 (101-193)||(38078676-38078769)
chr1 (44-91)||(42359391-42359438)
chr1 (105-171)||(2896140-2896206)
chr1 (101-171)||(5376515-5376585)
chr1 (42-92)||(6427544-6427594)
chr1 (42-92)||(9828124-9828174)
chr1 (101-187)||(10572604-10572690)
chr1 (42-92)||(18337398-18337448)
chr1 (42-88)||(18556385-18556431)
chr1 (78-180)||(22794071-22794172)
chr1 (155-193)||(24577249-24577287)
chr1 (99-193)||(34315665-34315758)
chr1 (102-144)||(39953162-39953204)
chr1 (42-92)||(40917829-40917879)
chr1 (42-92)||(46348323-46348373)
chr1 (42-88)||(51410098-51410144)
chr1 (101-162)||(1705007-1705068)
chr1 (81-162)||(1815240-1815321)
chr1 (99-180)||(5898279-5898359)
chr1 (94-163)||(7353501-7353570)
chr1 (42-91)||(15765828-15765877)
chr1 (99-144)||(40181872-40181917)
chr1 (101-153)||(113291-113343)
chr1 (44-92)||(1486646-1486694)
chr1 (98-171)||(5944255-5944330)
chr1 (47-163)||(12443422-12443537)
chr1 (99-171)||(15641043-15641115)
chr1 (87-139)||(16927186-16927238)
chr1 (44-92)||(17778622-17778670)
chr1 (99-143)||(34712396-34712440)
chr1 (99-159)||(36878447-36878507)
chr1 (41-77)||(38078600-38078636)
chr1 (101-180)||(40917716-40917793)
[»] chr6 (61 HSPs)
chr6 (42-186)||(7938075-7938219)
chr6 (101-193)||(8365534-8365626)
chr6 (101-193)||(12696277-12696368)
chr6 (42-170)||(7086770-7086904)
chr6 (42-171)||(9027152-9027286)
chr6 (99-193)||(9658832-9658925)
chr6 (36-90)||(10339048-10339102)
chr6 (99-193)||(30866157-30866251)
chr6 (42-180)||(426478-426608)
chr6 (101-186)||(16766656-16766741)
chr6 (45-144)||(9025448-9025552)
chr6 (43-91)||(17841530-17841578)
chr6 (101-165)||(17841604-17841668)
chr6 (98-193)||(3398571-3398665)
chr6 (101-180)||(10770689-10770767)
chr6 (43-193)||(31959112-31959268)
chr6 (81-171)||(8776968-8777058)
chr6 (100-170)||(8805586-8805656)
chr6 (58-144)||(21924907-21924993)
chr6 (99-180)||(5732523-5732604)
chr6 (99-180)||(34073360-34073441)
chr6 (101-193)||(853874-853966)
chr6 (42-90)||(13360313-13360361)
chr6 (101-180)||(7977845-7977924)
chr6 (101-180)||(9107385-9107464)
chr6 (101-180)||(34595099-34595178)
chr6 (99-161)||(7265606-7265668)
chr6 (42-92)||(8365448-8365498)
chr6 (42-92)||(8776908-8776958)
chr6 (42-92)||(28152167-28152217)
chr6 (42-91)||(9629464-9629513)
chr6 (103-159)||(10842518-10842574)
chr6 (131-171)||(21068199-21068239)
chr6 (101-165)||(21395323-21395386)
chr6 (99-171)||(33001302-33001374)
chr6 (100-171)||(31579239-31579310)
chr6 (155-190)||(35123625-35123660)
chr6 (103-193)||(6389695-6389785)
chr6 (42-92)||(6898221-6898271)
chr6 (99-193)||(7996391-7996485)
chr6 (99-193)||(8022316-8022410)
chr6 (99-165)||(10888987-10889053)
chr6 (101-171)||(16833282-16833352)
chr6 (42-92)||(17327590-17327640)
chr6 (98-168)||(17341676-17341746)
chr6 (82-147)||(32298603-32298668)
chr6 (42-75)||(32511606-32511639)
chr6 (87-144)||(32511667-32511724)
chr6 (101-180)||(3209347-3209426)
chr6 (41-77)||(3209483-3209519)
chr6 (42-90)||(4878014-4878061)
chr6 (99-147)||(7151410-7151458)
chr6 (40-92)||(7625185-7625237)
chr6 (42-90)||(7977770-7977818)
chr6 (39-91)||(9107296-9107348)
chr6 (41-77)||(9911481-9911517)
chr6 (99-167)||(19044442-19044510)
chr6 (99-163)||(26562671-26562735)
chr6 (101-165)||(28152079-28152142)
chr6 (99-135)||(32248938-32248974)
chr6 (40-92)||(34595203-34595255)
[»] chr2 (51 HSPs)
chr2 (42-193)||(20539632-20539781)
chr2 (100-193)||(21782832-21782925)
chr2 (85-170)||(21616737-21616822)
chr2 (39-92)||(26769591-26769644)
chr2 (99-193)||(23717979-23718072)
chr2 (99-193)||(24105651-24105744)
chr2 (101-193)||(19536412-19536505)
chr2 (44-165)||(42832234-42832355)
chr2 (99-167)||(31018568-31018636)
chr2 (101-193)||(21374714-21374807)
chr2 (101-180)||(30404865-30404943)
chr2 (99-170)||(34784995-34785066)
chr2 (101-167)||(6940233-6940299)
chr2 (101-167)||(18421941-18422007)
chr2 (42-92)||(35056948-35056998)
chr2 (42-92)||(37419823-37419873)
chr2 (124-193)||(21624218-21624287)
chr2 (42-91)||(34993922-34993971)
chr2 (81-186)||(40361749-40361854)
chr2 (41-77)||(10535684-10535720)
chr2 (94-170)||(30335392-30335468)
chr2 (42-86)||(44635568-44635612)
chr2 (99-138)||(2665901-2665940)
chr2 (101-164)||(24894370-24894433)
chr2 (40-91)||(29367281-29367332)
chr2 (44-90)||(2438661-2438707)
chr2 (99-193)||(20242740-20242833)
chr2 (42-92)||(27084338-27084388)
chr2 (100-170)||(28412325-28412395)
chr2 (99-165)||(30527608-30527674)
chr2 (131-193)||(33519738-33519800)
chr2 (100-170)||(36409641-36409711)
chr2 (42-92)||(38117099-38117149)
chr2 (42-92)||(42511322-42511372)
chr2 (41-90)||(11223792-11223841)
chr2 (47-92)||(12224292-12224337)
chr2 (101-193)||(14996238-14996330)
chr2 (94-171)||(15657838-15657915)
chr2 (42-91)||(15909570-15909619)
chr2 (100-165)||(16069268-16069333)
chr2 (33-90)||(18840944-18841001)
chr2 (43-92)||(28596538-28596587)
chr2 (99-144)||(28677910-28677955)
chr2 (101-166)||(30717545-30717610)
chr2 (38-91)||(32749750-32749803)
chr2 (42-90)||(6180790-6180838)
chr2 (94-170)||(12940943-12941019)
chr2 (39-91)||(24975252-24975304)
chr2 (99-131)||(28602361-28602393)
chr2 (99-159)||(31808063-31808123)
chr2 (101-165)||(37558957-37559021)
[»] chr5 (35 HSPs)
chr5 (98-193)||(22013366-22013461)
chr5 (129-193)||(19820437-19820501)
chr5 (101-171)||(21522724-21522794)
chr5 (101-171)||(21533290-21533360)
chr5 (42-193)||(2436880-2437030)
chr5 (40-165)||(14674249-14674370)
chr5 (42-180)||(6326253-6326391)
chr5 (101-171)||(21191071-21191141)
chr5 (98-180)||(25888305-25888389)
chr5 (101-193)||(6247574-6247666)
chr5 (101-193)||(21576760-21576847)
chr5 (42-92)||(21576685-21576735)
chr5 (101-171)||(24906316-24906386)
chr5 (45-91)||(39268541-39268587)
chr5 (42-88)||(39698625-39698671)
chr5 (41-90)||(19820327-19820376)
chr5 (105-169)||(19552562-19552626)
chr5 (101-193)||(37328859-37328951)
chr5 (106-190)||(40000555-40000639)
chr5 (39-169)||(22423761-22423895)
chr5 (41-92)||(31084397-31084448)
chr5 (104-186)||(13287417-13287499)
chr5 (98-171)||(14422878-14422949)
chr5 (42-92)||(14873591-14873641)
chr5 (99-165)||(16203808-16203874)
chr5 (99-165)||(27144443-27144509)
chr5 (101-138)||(33178032-33178069)
chr5 (98-171)||(36642774-36642847)
chr5 (101-162)||(39698524-39698585)
chr5 (94-171)||(41633709-41633786)
chr5 (101-186)||(41995430-41995515)
chr5 (94-174)||(12927625-12927705)
chr5 (42-90)||(17123119-17123166)
chr5 (44-92)||(21190998-21191046)
chr5 (101-165)||(43001780-43001844)
[»] scaffold0020 (1 HSPs)
scaffold0020 (42-193)||(135263-135419)
[»] chr3 (53 HSPs)
chr3 (40-170)||(11610496-11610630)
chr3 (81-189)||(8383213-8383321)
chr3 (46-180)||(10335249-10335380)
chr3 (101-193)||(55401027-55401119)
chr3 (98-177)||(14840303-14840382)
chr3 (87-193)||(14216845-14216950)
chr3 (87-193)||(14222974-14223079)
chr3 (81-198)||(8842277-8842393)
chr3 (101-193)||(8587036-8587128)
chr3 (42-193)||(32429331-32429487)
chr3 (42-92)||(25074864-25074914)
chr3 (42-92)||(40052381-40052431)
chr3 (42-92)||(55401144-55401194)
chr3 (82-147)||(4201394-4201459)
chr3 (46-165)||(10317998-10318113)
chr3 (100-193)||(25064861-25064954)
chr3 (101-193)||(14747513-14747606)
chr3 (68-167)||(10268468-10268567)
chr3 (101-180)||(28917966-28918045)
chr3 (42-92)||(21211363-21211413)
chr3 (78-180)||(24205034-24205135)
chr3 (87-165)||(25948888-25948966)
chr3 (42-92)||(41961579-41961629)
chr3 (99-144)||(11313813-11313858)
chr3 (44-93)||(25775575-25775624)
chr3 (42-91)||(34185052-34185101)
chr3 (40-80)||(8842410-8842450)
chr3 (100-144)||(27277852-27277896)
chr3 (101-144)||(1509540-1509583)
chr3 (42-93)||(3163971-3164022)
chr3 (43-90)||(8789489-8789536)
chr3 (101-180)||(15796309-15796388)
chr3 (99-162)||(49505167-49505230)
chr3 (101-171)||(3610607-3610677)
chr3 (42-92)||(8101892-8101942)
chr3 (102-180)||(14979147-14979224)
chr3 (40-90)||(20503536-20503586)
chr3 (101-171)||(26492220-26492290)
chr3 (42-92)||(27505320-27505370)
chr3 (101-158)||(4987306-4987363)
chr3 (101-186)||(4990982-4991067)
chr3 (99-144)||(7928451-7928496)
chr3 (99-180)||(10455755-10455836)
chr3 (101-138)||(14209120-14209157)
chr3 (47-91)||(1509637-1509681)
chr3 (104-180)||(3164043-3164119)
chr3 (44-92)||(4987222-4987270)
chr3 (103-191)||(10954911-10954994)
chr3 (94-162)||(18426932-18427000)
chr3 (44-92)||(28918072-28918120)
chr3 (99-139)||(38731224-38731264)
chr3 (42-90)||(40993275-40993323)
chr3 (101-137)||(55212971-55213007)
[»] scaffold0223 (1 HSPs)
scaffold0223 (101-193)||(20124-20216)
[»] chr8 (41 HSPs)
chr8 (101-186)||(2572071-2572156)
chr8 (41-138)||(4948659-4948755)
chr8 (101-171)||(8343290-8343360)
chr8 (101-180)||(22197757-22197836)
chr8 (99-186)||(24362215-24362302)
chr8 (67-144)||(14731713-14731791)
chr8 (101-171)||(20873043-20873113)
chr8 (42-171)||(27213521-27213644)
chr8 (98-162)||(15816141-15816205)
chr8 (99-159)||(39954292-39954352)
chr8 (41-88)||(11944749-11944796)
chr8 (112-171)||(22651950-22652009)
chr8 (98-193)||(25192359-25192454)
chr8 (98-180)||(926800-926882)
chr8 (101-171)||(29510319-29510389)
chr8 (112-193)||(13436990-13437071)
chr8 (87-160)||(30077388-30077461)
chr8 (101-193)||(4298901-4298992)
chr8 (99-159)||(13844609-13844669)
chr8 (42-90)||(18407790-18407838)
chr8 (101-193)||(31556949-31557040)
chr8 (99-171)||(34222922-34222993)
chr8 (107-191)||(41838144-41838228)
chr8 (42-93)||(22204711-22204762)
chr8 (40-91)||(29447525-29447576)
chr8 (99-194)||(34451050-34451144)
chr8 (42-88)||(949205-949251)
chr8 (46-92)||(5813661-5813707)
chr8 (101-139)||(8342978-8343016)
chr8 (99-193)||(13203593-13203687)
chr8 (42-92)||(29510233-29510283)
chr8 (99-181)||(33405397-33405479)
chr8 (155-193)||(40332157-40332195)
chr8 (101-186)||(4673440-4673525)
chr8 (99-172)||(12570521-12570594)
chr8 (42-91)||(22652057-22652106)
chr8 (99-180)||(28385007-28385088)
chr8 (42-91)||(30067968-30068017)
chr8 (129-193)||(126392-126455)
chr8 (42-90)||(13397622-13397670)
chr8 (101-165)||(36450769-36450833)
[»] scaffold0003 (2 HSPs)
scaffold0003 (100-180)||(241559-241639)
scaffold0003 (40-92)||(241674-241726)
[»] chr7 (47 HSPs)
chr7 (101-193)||(24105631-24105722)
chr7 (101-193)||(27944993-27945085)
chr7 (101-186)||(24339601-24339686)
chr7 (104-193)||(43027487-43027576)
chr7 (101-167)||(11061091-11061157)
chr7 (42-169)||(30813788-30813916)
chr7 (105-193)||(2034394-2034481)
chr7 (42-92)||(5409771-5409821)
chr7 (99-193)||(7328704-7328798)
chr7 (101-171)||(13770665-13770735)
chr7 (81-171)||(25481876-25481966)
chr7 (99-180)||(17851396-17851477)
chr7 (49-165)||(18215144-18215265)
chr7 (99-180)||(19206015-19206096)
chr7 (98-174)||(4017806-4017882)
chr7 (112-180)||(11722124-11722192)
chr7 (81-165)||(15680789-15680873)
chr7 (99-167)||(18013087-18013155)
chr7 (101-193)||(33994164-33994256)
chr7 (99-182)||(5235949-5236032)
chr7 (43-90)||(20549862-20549909)
chr7 (101-193)||(21864758-21864852)
chr7 (42-77)||(32093954-32093989)
chr7 (112-159)||(45056927-45056974)
chr7 (42-92)||(598277-598327)
chr7 (99-169)||(3721070-3721139)
chr7 (42-92)||(7133212-7133262)
chr7 (42-92)||(9778574-9778624)
chr7 (42-84)||(11738151-11738193)
chr7 (42-92)||(15680878-15680928)
chr7 (42-92)||(17852069-17852119)
chr7 (42-137)||(38143231-38143318)
chr7 (42-92)||(43027404-43027454)
chr7 (42-91)||(6490786-6490835)
chr7 (42-91)||(24105748-24105797)
chr7 (101-170)||(26733279-26733348)
chr7 (99-144)||(27093426-27093471)
chr7 (99-144)||(27184830-27184875)
chr7 (42-90)||(2334331-2334379)
chr7 (41-77)||(7328638-7328674)
chr7 (101-137)||(9408349-9408385)
chr7 (99-171)||(15902796-15902868)
chr7 (104-144)||(19213804-19213844)
chr7 (40-88)||(24339726-24339774)
chr7 (94-189)||(32094028-32094124)
chr7 (43-91)||(32287404-32287452)
chr7 (42-90)||(33994283-33994331)
[»] chr4 (44 HSPs)
chr4 (44-170)||(22440559-22440684)
chr4 (40-90)||(29205539-29205589)
chr4 (41-92)||(34306743-34306794)
chr4 (88-171)||(36635298-36635381)
chr4 (40-144)||(37203265-37203373)
chr4 (42-92)||(19482748-19482798)
chr4 (99-144)||(15029766-15029811)
chr4 (101-186)||(23293001-23293086)
chr4 (81-186)||(35157980-35158085)
chr4 (42-90)||(3064868-3064916)
chr4 (42-90)||(16184902-16184950)
chr4 (101-193)||(31800493-31800585)
chr4 (87-170)||(19482643-19482726)
chr4 (45-92)||(28084593-28084640)
chr4 (40-90)||(715543-715593)
chr4 (40-90)||(752869-752919)
chr4 (40-122)||(10499225-10499306)
chr4 (42-92)||(23292926-23292976)
chr4 (81-186)||(12895269-12895374)
chr4 (99-180)||(24343472-24343553)
chr4 (107-191)||(11651155-11651239)
chr4 (42-90)||(16073465-16073513)
chr4 (40-92)||(24343582-24343634)
chr4 (81-144)||(8423713-8423776)
chr4 (42-77)||(12895214-12895249)
chr4 (39-93)||(2361912-2361966)
chr4 (98-172)||(14126123-14126197)
chr4 (42-88)||(28964188-28964234)
chr4 (101-147)||(29205442-29205488)
chr4 (99-144)||(13134451-13134496)
chr4 (43-92)||(14465006-14465055)
chr4 (42-91)||(18513175-18513224)
chr4 (42-91)||(20633541-20633590)
chr4 (101-170)||(27706192-27706261)
chr4 (43-92)||(44081508-44081557)
chr4 (81-138)||(54580018-54580075)
chr4 (101-153)||(2361990-2362042)
chr4 (101-193)||(3947781-3947872)
chr4 (99-171)||(5414185-5414257)
chr4 (101-137)||(6485626-6485662)
chr4 (42-90)||(8423658-8423706)
chr4 (42-90)||(11596297-11596345)
chr4 (101-165)||(14465090-14465154)
chr4 (43-91)||(40965341-40965389)
[»] scaffold0053 (2 HSPs)
scaffold0053 (101-186)||(8757-8842)
scaffold0053 (40-92)||(8867-8919)
[»] scaffold0027 (1 HSPs)
scaffold0027 (42-171)||(46656-46776)
[»] scaffold0022 (1 HSPs)
scaffold0022 (94-182)||(90806-90894)
[»] scaffold0008 (1 HSPs)
scaffold0008 (98-186)||(263384-263472)
[»] scaffold0361 (1 HSPs)
scaffold0361 (41-92)||(14596-14647)
[»] scaffold0171 (1 HSPs)
scaffold0171 (98-193)||(23373-23467)
[»] scaffold0306 (1 HSPs)
scaffold0306 (101-193)||(13352-13444)
[»] scaffold0152 (1 HSPs)
scaffold0152 (101-193)||(21883-21975)
[»] scaffold0103 (1 HSPs)
scaffold0103 (101-165)||(51791-51855)
[»] scaffold0018 (1 HSPs)
scaffold0018 (101-192)||(178833-178925)
[»] scaffold0793 (1 HSPs)
scaffold0793 (40-90)||(4819-4869)
[»] scaffold0652 (2 HSPs)
scaffold0652 (101-186)||(477-562)
scaffold0652 (43-92)||(403-452)
[»] scaffold0450 (1 HSPs)
scaffold0450 (40-92)||(8562-8614)
[»] scaffold0279 (1 HSPs)
scaffold0279 (129-193)||(17913-17977)
[»] scaffold0475 (1 HSPs)
scaffold0475 (42-85)||(3384-3427)
[»] scaffold0512 (1 HSPs)
scaffold0512 (42-92)||(4976-5026)
[»] scaffold0380 (1 HSPs)
scaffold0380 (42-92)||(8670-8720)
[»] scaffold0227 (1 HSPs)
scaffold0227 (93-138)||(7318-7363)
[»] scaffold0057 (1 HSPs)
scaffold0057 (42-91)||(24107-24155)
[»] scaffold0021 (2 HSPs)
scaffold0021 (101-186)||(130441-130526)
scaffold0021 (42-90)||(2978-3026)
[»] scaffold0011 (1 HSPs)
scaffold0011 (101-138)||(17764-17801)
[»] scaffold0136 (1 HSPs)
scaffold0136 (42-90)||(3778-3826)


Alignment Details
Target: chr1 (Bit Score: 131; Significance: 4e-68; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 204
Target Start/End: Original strand, 23531705 - 23531902
Alignment:
Q  13 aaagggagagaaaatttaataggttgcatctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||| | |    
T  23531705 aaagggagagaaaatttaataggttgcatctatgaagcacgaacactcctccgattaagcgtgtttcagtgtcggacgcgaacatttataattacattga 23531804  T
Q  113 attatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcca------gtatccgtatccgtgcttcatggggttgcata 204  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||||||| |||||||||      || ||||||||||||||||| |||||||||||    
T  23531805 attatgtgatattttcaaattattagcagtattgaagtgtcggtgtccgtatcgtgtccagtgtccgtgtccgtatccgtgcttcacggggttgcata 23531902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 190
Target Start/End: Original strand, 5927355 - 5927444
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgctt 190  Q
    |||||||| |||||||| |||| |||| ||||||||||||||||| | ||||| ||||||||||||||||| || |||||||||||||||    
T  5927355 taattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgctt 5927444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 46 - 184
Target Start/End: Original strand, 48040418 - 48040560
Alignment:
Q  46 gaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacga---acatttataattacactaaattatgtga-tattttaaaattattagcag 141  Q
    |||||||| |||||||||| |||||||||||| |||||||||||||||   ||| || || |||||||||| |||||||   |||| ||||||||| | |    
T  48040418 gaagcacggacactcctccaattaggcgtgtcccagtgtcggacacgaccgacacttgtatttacactaaaatatgtgacctttttcaaattattatctg 48040517  T
Q  142 tgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatcc 184  Q
    ||| || ||||| ||||||||||||||||| || |||||||||    
T  48040518 tgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatcc 48040560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 171
Target Start/End: Original strand, 48450550 - 48450672
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcag 141  Q
    |||||||||||| ||||||||| |||||| |||||| | ||||| |||||      || ||||||||||||||||||| || |||| ||||||||||| |    
T  48450550 ctatgaagcacggacactcctcggattagacgtgtc-ctgtgtccgacac------ttgtaattacactaaattatgttattttttcaaattattagctg 48450642  T
Q  142 tgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||| ||||| |||||||||||||||||    
T  48450643 tgttggcgtgtcagtgtccgtgtcgtgtcc 48450672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 398778 - 398850
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||||| ||||||||||| |||| ||||||||||| |||| || ||||| |||||||||||||||||    
T  398778 tataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtcc 398850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 186
Target Start/End: Original strand, 1486721 - 1486809
Alignment:
Q  98 ttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    ||||||||||||| ||||||||||| |||| ||||||||||| ||||  | ||||| || |||||||||| ||| |||||||| |||||    
T  1486721 ttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgtgtccgt 1486809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 18556471 - 18556535
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    |||||||| |||||||||||||||||| ||||||||||| |||| || ||||| |||||||||||    
T  18556471 taattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 21378622 - 21378531
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||| |||||||| || |||| || |||||||| |||| || |||||  ||||||||||||||||| |||| |||||||||||||||    
T  21378622 taattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgtgtcgtgtcca-tatctgtatccgtgcttcat 21378531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 2218347 - 2218264
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacga-----acatttataattacactaaattatgtg 120  Q
    |||||||||||| ||||||||| |||||||||||||  ||||||||||||||     ||| || ||||||||||||||||||||    
T  2218347 ctatgaagcacggacactcctcagattaggcgtgtcctagtgtcggacacgacaccgacacttgtaattacactaaattatgtg 2218264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 14359537 - 14359614
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||||||||||||||||| |||| ||||||||||| |||| || ||||| ||||| ||||||||||| ||||||||    
T  14359537 taattacactaaattatgtgat-ttttcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtcc-gtatccgt 14359614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 35702542 - 35702689
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctca--gtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagc 139  Q
    |||||||||||| ||||||||| ||||||||||||| ||  ||||| |||||  ||| || |||||||||| |||||| |||  |||| |||||||||||    
T  35702542 ctatgaagcacggacactcctcggattaggcgtgtcccatcgtgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagc 35702641  T
Q  140 agtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
     |||| ||        |||| ||||||||||| || ||||||||||||||||||    
T  35702642 tgtgtcgg------catgtcagtgtcgtgtccggtgtccgtatccgtgcttcat 35702689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 159
Target Start/End: Original strand, 22881567 - 22881689
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcg-----gacacgaacatttataattacactaaattatgtgatattttaaaattatt 136  Q
    |||||||||||| ||||||||| |||||| |||||| | ||||||     |||||  ||| || |||||||||||||||||||||| |||| ||||||||    
T  22881567 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatt 22881666  T
Q  137 agcagtgttggagtgtcggtgtc 159  Q
    ||  |||| || ||||| |||||    
T  22881667 agttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 6427396 - 6427324
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||| | ||||||||||| || | ||||||||||| ||||||| ||||| ||||||||| |||||||    
T  6427396 tataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtcc 6427324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 46348398 - 46348462
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    ||||||||||||||||| |||| |||| ||||||||||| |||| || ||||| |||||||||||    
T  46348398 taattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 46348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 186
Target Start/End: Original strand, 10577748 - 10577835
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    ||||||||||||  ||| |||||| || |||||  |||||| |||| || ||||||||||||||||||||||| || ||||| |||||    
T  10577748 tataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgtgtccgt 10577835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 13436562 - 13436459
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgt-ctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagca 140  Q
    |||||||||||| ||||| ||| |||||| ||||| ||  ||||| ||||| ||||  |||||||||||| ||||||||||| |  | ||||||||||||    
T  13436562 ctatgaagcacggacacttctcggattagtcgtgttctacgtgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattagca 13436463  T
Q  141 gtgt 144  Q
    ||||    
T  13436462 gtgt 13436459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 5944415 - 5944365
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||||||||||||||| |||||||||| || | ||||||||||    
T  5944415 atctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggaca 5944365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 21365992 - 21366038
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcgga 88  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  21365992 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 21366038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 22515827 - 22515873
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcgga 88  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 22515873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 22515902 - 22515964
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtg 163  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||  | ||||| |||||||||    
T  22515902 taattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtccgtg 22515964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 164
Target Start/End: Original strand, 35919225 - 35919359
Alignment:
Q  41 tctatgaagcacgaacactcctccgattaggcgtgtctc-agtgtcggacacga-----acatttataattacactaaattatgtgatatt-----ttaa 129  Q
    ||||||||||||| ||| ||||||||||||||||||| |  ||||| |||||||     ||| ||||||||||||| ||||||||||| ||     || |    
T  35919225 tctatgaagcacggacagtcctccgattaggcgtgtcccgcgtgtccgacacgacacggacacttataattacactgaattatgtgattttttttcttca 35919324  T
Q  130 aattattagcagtgttggagtgtcggtgtccgtgt 164  Q
    |||||||||  |||| ||||||| |||||||||||    
T  35919325 aattattagatgtgtcggagtgttggtgtccgtgt 35919359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 37598950 - 37598900
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||| ||||||||||||| || |||||||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacg 37598900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 39130780 - 39130874
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||||||||||| | || || |||||||||||  |||||  | |||||  | ||| |||||||||| || ||||||||||||||||||    
T  39130780 tataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgtatccgtgcttcat 39130874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 46940748 - 46940798
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||||||||||||| ||||||||||||  | ||||||||||||    
T  46940748 ctatgaagcacgaacactcctcggattaggcgtgttccggtgtcggacacg 46940798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 1262917 - 1262848
Alignment:
Q  112 aattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgta 181  Q
    ||||||||||| || | ||||||||||| |||| || ||||| |||| |||||||||||| |||||||||    
T  1262917 aattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccggtatccgta 1262848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 3490352 - 3490497
Alignment:
Q  47 aagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttg 146  Q
    ||||||| ||||| ||| ||||||  ||||| || |||||||||||| || || |||||||||| ||| ||||  | || | |||||||||||||||| |    
T  3490352 aagcacggacacttctcggattagatgtgtcccaatgtcggacacga-cacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcg 3490450  T
Q  147 gagtgtcggtgtccgtgtc--gtgtccagtatccgtatccgtgcttcat 193  Q
    | ||||| ||||| |||||  |||||  |||||||||||||||||||||    
T  3490451 gcgtgtcagtgtc-gtgtccggtgtct-gtatccgtatccgtgcttcat 3490497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 25452108 - 25452234
Alignment:
Q  44 atgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtg 143  Q
    |||||||||| ||||| |||  |||||||||||  | ||||| |||||  |||   ||||||||||| ||||||| ||| || | |||||||||||||||    
T  25452108 atgaagcacggacactgctcgaattaggcgtgttccggtgtctgacaccgacac--ataattacactgaattatgagattttctcaaattattagcagtg 25452205  T
Q  144 ttggagtgtcggtgtccgtgtcgtgtcca 172  Q
    ||||  ||||||||||  |||| ||||||    
T  25452206 ttggcatgtcggtgtctttgtcatgtcca 25452234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 28460873 - 28460776
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattatta 137  Q
    |||||||||||||||| |||  |   ||||||||||| || |||||||||||| |||| |||||||||| | |||||| |||| || | |||||||||    
T  28460873 atctatgaagcacgaatacttttaaaattaggcgtgtttcggtgtcggacacgtacatatataattacatttaattatttgattttctgaaattatta 28460776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 1704933 - 1704985
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| | ||||||||  ||||||||||||||| ||||||||||||    
T  1704933 atctatgaagcatggacactccttggattaggcgtgtctcggtgtcggacacg 1704985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 21366039 - 21366103
Alignment:
Q  105 tacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgt 169  Q
    |||||| |||||||| || |||||||||||||||| |||  || |||||||||| ||||||||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtgccggcgtgtcggtgttcgtgtcgtgt 21366103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 31015087 - 31014995
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||| ||||||||||| || | ||||||||||| |||| || | ||| ||| |||||||||| || || || || ||||||||||||    
T  31015087 taattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgtgtccgtgcttcat 31014995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 9103741 - 9103615
Alignment:
Q  43 tatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagt 142  Q
    ||||||||||| |||||| |  |||||||||| | || ||||| |||||  ||| || || ||| ||||||||||||||| |||| ||||||||| | ||    
T  9103741 tatgaagcacggacactcttaagattaggcgtttttcggtgtccgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgt 9103643  T
Q  143 gttggagtgtcggtgtccgtgtcgtgtc 170  Q
    || || ||||| ||||||| ||| ||||    
T  9103642 gtcggcgtgtcagtgtccgagtcctgtc 9103615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 77
Target Start/End: Original strand, 9630561 - 9630596
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtc 77  Q
    |||||||||||||||||||||| |||||||||||||    
T  9630561 ctatgaagcacgaacactcctcggattaggcgtgtc 9630596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 34298482 - 34298411
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtc 170  Q
    |||||||||||| ||||||||||| || | ||||||||||  |||| || ||||| || |||||||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 38078676 - 38078769
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc--gtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||| | ||||||||||| |||| ||||||||||| |||| |  ||||| |||| ||||||  |||||| || ||||||||||||||||||    
T  38078676 taattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccggtgtcc-gtgtccgtatccgtgcttcat 38078769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 42359391 - 42359438
Alignment:
Q  44 atgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    |||||||||| ||||||||| ||||||||||||| | |||||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 42359438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 2896140 - 2896206
Alignment:
Q  105 tacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||| ||||||||||| || | ||||||||||| |||| || ||||| |||||||||| ||||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtcc 2896206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 5376515 - 5376585
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||| |||||||| || || | ||||||||||| |||| || ||||  |||||||||||||||||    
T  5376515 taattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtcc 5376585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 6427594 - 6427544
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| |||||| || ||||||||||||| | ||||||||||||    
T  6427594 ctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacg 6427544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 9828174 - 9828124
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||| |||||| |||||| | ||||||||||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacg 9828124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 187
Target Start/End: Original strand, 10572604 - 10572690
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtg 187  Q
    |||||||||  ||||||||||| || | ||||||||||  |||| || ||||| |||| | |||||||||| || ||||||||||||    
T  10572604 taattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatccgtg 10572690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 18337448 - 18337398
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||| ||| |||| |||| ||||||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacg 18337398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 18556385 - 18556431
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcgga 88  Q
    |||||||||||| ||||| ||| ||||||||||||| ||||||||||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcgga 18556431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 180
Target Start/End: Original strand, 22794071 - 22794172
Alignment:
Q  78 tcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatc 177  Q
    |||||||||||||||| ||  ||||||||||||  ||||||| || |||| ||||||||| | ||||||  ||||| |||||  |||||| ||| |||||    
T  22794071 tcagtgtcggacacga-cacctataattacactgtattatgtcattttttcaaattattatccgtgttgacgtgtcagtgtctatgtcgtatccggtatc 22794169  T
Q  178 cgt 180  Q
    |||    
T  22794170 cgt 22794172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 24577249 - 24577287
Alignment:
Q  155 gtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  24577249 gtgtccgtgtcgtgttcagtgtccgtatccgtgcttcat 24577287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 34315758 - 34315665
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||||  ||||||||  | ||||||||   ||||| |||| ||  |||| || ||||||||||||||| ||||||||||||||||||||    
T  34315758 tataattacaccgaattatgtagttttttaaaaaatttagctgtgtcggcatgtcagtatccgtgtcgtgtcca-tatccgtatccgtgcttcat 34315665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 144
Target Start/End: Original strand, 39953162 - 39953204
Alignment:
Q  102 aattacactaaattatgtgatattttaaaattattagcagtgt 144  Q
    ||||||||||||||||||||| || ||||||||||||| ||||    
T  39953162 aattacactaaattatgtgattttctaaaattattagcggtgt 39953204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 40917879 - 40917829
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||| ||||| ||||||||||||| | ||||||||||||    
T  40917879 ctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacg 40917829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 46348323 - 46348373
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| |||| |||| ||| ||||||||||| ||||||||||||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacg 46348373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 51410144 - 51410098
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcgga 88  Q
    |||||||||||||| ||||||  ||||||||||||||| ||||||||    
T  51410144 ctatgaagcacgaatactccttggattaggcgtgtctcggtgtcgga 51410098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 1705007 - 1705068
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgt 162  Q
    ||||||| || ||||||||||| |||| ||||||||||  |||| || ||||||||||||||    
T  1705007 taattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccgt 1705068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 1815321 - 1815240
Alignment:
Q  81 gtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgt 162  Q
    |||||||||||  ||| || |||||||||| ||||||||||| ||||||||| ||||   |||| || ||||| ||||||||    
T  1815321 gtgtcggacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 1815240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 5898279 - 5898359
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||||||| ||||||||||| |||| | ||||||||| |||| || || || ||||| ||||| ||||| ||||||||    
T  5898279 tataattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtcatgtcc-gtatccgt 5898359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 7353501 - 7353570
Alignment:
Q  94 acatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtg 163  Q
    |||| ||||||||||||||||||||| || ||||  ||||| |||||| || || |||||||||| ||||    
T  7353501 acatatataattacactaaattatgtaattttttcgaattaatagcagcgtcggtgtgtcggtgtacgtg 7353570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 15765877 - 15765828
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    |||||||||||| |||||| || ||||||||||||| ||||||| |||||    
T  15765877 ctatgaagcacggacactcttcggattaggcgtgtcccagtgtcagacac 15765828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 40181917 - 40181872
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgt 144  Q
    |||||||||||| ||||||||||| || | ||||||||||||||||    
T  40181917 tataattacactgaattatgtgattttctcaaattattagcagtgt 40181872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 113343 - 113291
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtc 153  Q
    |||||||||| ||||||||||| |||| ||||||||||| |||| || |||||    
T  113343 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 113291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 1486646 - 1486694
Alignment:
Q  44 atgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||  ||||||||| ||||||||||||| | ||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacg 1486694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 5944330 - 5944255
Alignment:
Q  98 ttataattacactaaattatgtga--tattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    ||||||||||||| ||||||||||  | |||| ||||||||||| |||  || ||||| ||||| |||||||||||    
T  5944330 ttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtcc 5944255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 163
Target Start/End: Original strand, 12443422 - 12443537
Alignment:
Q  47 aagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttg 146  Q
    ||||||| | || |||| ||||||| ||||||| ||||| ||||||  ||  || ||||||||| ||||||||||| || | ||||||||||| |||| |    
T  12443422 aagcacggatacccctcggattaggtgtgtctcggtgtccgacacgt-cacatacaattacactgaattatgtgattttctcaaattattagctgtgtcg 12443520  T
Q  147 gagtgtcggtgtccgtg 163  Q
    | ||||| || ||||||    
T  12443521 gcgtgtccgtatccgtg 12443537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 15641043 - 15641115
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||| ||||||| ||| ||||||| || | |||||||||||||||| ||  |||| ||||||||||| |||||    
T  15641043 tatagttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtcc 15641115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 16927186 - 16927238
Alignment:
Q  87 gacacgaacatttataattacactaaattatgtgatattttaaaattattagc 139  Q
    ||||| ||||| |||||||||||| |||||| |||| |||| |||||||||||    
T  16927186 gacaccaacatatataattacactgaattatatgattttttcaaattattagc 16927238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 17778670 - 17778622
Alignment:
Q  44 atgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||||||| ||| |||||||| |||| | ||||||||||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacg 17778622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 34712396 - 34712440
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtg 143  Q
    ||||||||||||||||||||| || || | |||||||||||||||    
T  34712396 tataattacactaaattatgttattttctcaaattattagcagtg 34712440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 36878507 - 36878447
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtc 159  Q
    |||||||||||| ||||||||||| || | ||||||||||| |||| || ||||| |||||    
T  36878507 tataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 38078600 - 38078636
Alignment:
Q  41 tctatgaagcacgaacactcctccgattaggcgtgtc 77  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  38078600 tctatgaagcacgaatactcctcggattaggcgtgtc 38078636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 40917793 - 40917716
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||||| ||||  ||||| |||| ||||||||||| |||| || ||||| || |||||||||||||| || |||||    
T  40917793 taattacacttaatt--gtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgt 40917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 7938219 - 7938075
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcag 141  Q
    |||||||||||| ||||||||| ||| ||||||||||| |||||||||||  ||| |||||||||||||||||||| |||| |||| ||||||||||| |    
T  7938219 ctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctg 7938120  T
Q  142 tgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    ||| || ||||| |||||| |||||||||| || ||||| |||||    
T  7938119 tgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgt 7938075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 8365534 - 8365626
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||  |||||||||||||||| ||||||||||  |||| || ||||| ||||||||||||||||  || ||||||||||||||||||    
T  8365534 taattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccgtgcttcat 8365626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 12696368 - 12696277
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||| |||||||| || |||| ||||||||||| |||| || ||||| ||||||||||||||||| || ||||||||||||||||||    
T  12696368 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc-gtgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 170
Target Start/End: Complemental strand, 7086904 - 7086770
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctca-gtgtcggacacga-----acatttataattacactaaattatgtgatattttaaaattat 135  Q
    |||||||||||| | ||||||| |||||||| ||||||| ||||| ||||| |     |||  |||||||||||||||||||||||| || | |||||||    
T  7086904 ctatgaagcacggaaactcctcggattaggcatgtctcacgtgtctgacactacaccgacacatataattacactaaattatgtgattttctcaaattat 7086805  T
Q  136 tagcagtgttggagtgtcggtgtccgtgtcgtgtc 170  Q
    ||||||||  |  ||||||||||| ||||||||||    
T  7086804 tagcagtgccgacgtgtcggtgtctgtgtcgtgtc 7086770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 9027286 - 9027152
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacga-----acatttataattacactaaattatgtgatattttaaaattatt 136  Q
    ||||||||||| |||||||||  |||||| |||||| | |||||||||||||     |||  |||||||||||  |||||||||||  | | ||||||||    
T  9027286 ctatgaagcacaaacactccttggattagccgtgtcccggtgtcggacacgacaccgacacatataattacacggaattatgtgattatctcaaattatt 9027187  T
Q  137 agcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    ||| |||| || ||||| |||||||||||||||||    
T  9027186 agcggtgtcggcgtgtcagtgtccgtgtcgtgtcc 9027152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 9658925 - 9658832
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||||| ||||||||||| || | ||||||||||| |||| || ||||| ||||||||||||||| | || || |||||||||||||||    
T  9658925 tataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt-ctgtgtctgtatccgtgcttcat 9658832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 10339048 - 10339102
Alignment:
Q  36 ttgcatctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    ||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  10339048 ttgcacctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 10339102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 30866157 - 30866251
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||| | ||||||||||| || | ||||||||||| ||||||| ||||||||||| ||||| ||||| || ||||||| ||| ||||||    
T  30866157 tataattacattgaattatgtgattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtattcgtacttcat 30866251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 426478 - 426608
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcag 141  Q
    |||||||||||| ||||||||| |||||||||||||         |||||  ||| || |||||||| | ||||||||||| |||| ||||||||| | |    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtcc--------gacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactg 426569  T
Q  142 tgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    ||| || ||||| ||||||||||||||||| ||||||||    
T  426570 tgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgt 426608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 16766741 - 16766656
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    |||||||||| ||||||||||| |||| ||||||||||| |||| || ||||| |||||| |||||||||| || ||||| |||||    
T  16766741 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgt 16766656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 9025448 - 9025552
Alignment:
Q  45 tgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacga-----acatttataattacactaaattatgtgatattttaaaattattagc 139  Q
    ||||||||| ||||| ||| ||||||||||||| | |||||||||||||     |||  |||||||||||| ||||||||||| || | |||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagc 9025547  T
Q  140 agtgt 144  Q
    |||||    
T  9025548 agtgt 9025552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 17841530 - 17841578
Alignment:
Q  43 tatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacac 17841578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 17841604 - 17841668
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    |||||||||||||||||||||| |||| ||||||||||| |||| || ||||| |||||||||||    
T  17841604 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 3398665 - 3398571
Alignment:
Q  98 ttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||||| |||||| |||| |||| ||||||||||| |||| || ||||| ||||||||||||||| |  | ||||||||| ||||||||    
T  3398665 ttataattacactgaattatatgat-ttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatccatgcttcat 3398571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 10770689 - 10770767
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||||| ||||||||||| |||| ||||||||||  ||||||| ||||| |||||| |||||||||| ||||||||    
T  10770689 taattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtcc-gtatccgt 10770767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 193
Target Start/End: Complemental strand, 31959268 - 31959112
Alignment:
Q  43 tatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacga-------acatttataattacactaaattatgtgatattttaaaattat 135  Q
    ||||||||||| ||||||||| ||||||| ||||| | |||||||||||         ||| || ||||||||||  |||||||||| |||| |||||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtcgccgacacttgtaattacactgcattatgtgattttttcaaattat 31959169  T
Q  136 tagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||| |||  || ||||| |||| |||||| ||||| || ||||||||||||||||||    
T  31959168 tagctgtgacggcgtgtcagtgttcgtgtcatgtcc-gtgtccgtatccgtgcttcat 31959112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 171
Target Start/End: Original strand, 8776968 - 8777058
Alignment:
Q  81 gtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    ||||| ||||| |||| || |||||||||| |||| |||||| |||| ||||||||||  |||| || ||||| |||||||||||||||||    
T  8776968 gtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtcc 8777058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 8805586 - 8805656
Alignment:
Q  100 ataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtc 170  Q
    ||||||||||||||||||||||| || | |||||||||||||||  |  ||||||||||| ||||||||||    
T  8805586 ataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtc 8805656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 21924907 - 21924993
Alignment:
Q  58 ctcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgt 144  Q
    |||||| ||||||||||||| | ||||| |||||  |||  |||||||||||| |||||| ||||||| | ||||||||||||||||    
T  21924907 ctcctcggattaggcgtgtcccggtgtccgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgt 21924993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 5732523 - 5732604
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    ||||||||||||||| |||||||| || | ||||||||| | |||| || ||||| |||||| ||||||||||||| |||||    
T  5732523 tataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgt 5732604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 34073360 - 34073441
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||||||| ||||||| ||| || | |||||||||||  ||||||  |||| |||||||||||||||||||| |||||    
T  34073360 tataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagtgtccgt 34073441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 853874 - 853966
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||| |||| ||||||||||| |||| ||||||||||  |||| || ||||| |  |||||||||||||| || |||||||||||| |||||    
T  853874 taattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatccgtgattcat 853966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 13360313 - 13360361
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||||    
T  13360313 ctatgaagcacggacactcttcggattaggcgtgtctcagtgtcggaca 13360361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 7977845 - 7977924
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||||| |||||||| || |||| ||||||||||| |||| || ||||| || ||| ||||||||||||| |||||    
T  7977845 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgt 7977924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 9107385 - 9107464
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||||| |||| |||||| |||| ||||||||||| |||| || ||||  ||||||||||||||||| || |||||    
T  9107385 taattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgt 9107464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 34595178 - 34595099
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||||| ||||||||||| |||| ||||||||||  |||| || |||||  |||||||||||||||| || |||||    
T  34595178 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 34595099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 7265606 - 7265668
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccg 161  Q
    |||||||||||| ||||||||||| || | ||||||||||| ||||||| ||||| |||||||    
T  7265606 tataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 8365448 - 8365498
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| | ||||||| ||||||||||||| ||||||||||||||    
T  8365448 ctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacg 8365498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 8776908 - 8776958
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||| ||||||| ||||||| ||||||||||||    
T  8776908 ctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacg 8776958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 28152217 - 28152167
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||||||||||||| |||||||| |||| | ||||||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacg 28152167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 9629513 - 9629464
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    |||||||||| | ||||||||| |||||| ||||||||||||||||||||    
T  9629513 ctatgaagcatggacactcctcggattagacgtgtctcagtgtcggacac 9629464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 10842574 - 10842518
Alignment:
Q  103 attacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtc 159  Q
    |||||||||||||||||||| |||| ||||||||||| |||| || ||||| |||||    
T  10842574 attacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtccgtgtc 10842518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 21068199 - 21068239
Alignment:
Q  131 attattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  21068199 attattagcagtgttggcgtgtcggtgtctgtgtcgtgtcc 21068239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 21395323 - 21395386
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    ||||||||||||||||||| || || | ||||||||||| ||||||| |||||||||||| ||||    
T  21395323 taattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtcggtgtccatgtc 21395386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 33001302 - 33001374
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||| | ||||||||||| |||| |||||||||||||||| || |||||  || |||||| ||||||    
T  33001302 tataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtcattgaccgtgttgtgtcc 33001374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 31579239 - 31579310
Alignment:
Q  100 ataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    ||||||||||| ||||||||||| || | ||||||||| | ||||||| ||| | |||||| ||||||||||    
T  31579239 ataattacactgaattatgtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtgtcc 31579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 35123625 - 35123660
Alignment:
Q  155 gtgtccgtgtcgtgtccagtatccgtatccgtgctt 190  Q
    |||||||||||||||||||||||||| |||||||||    
T  35123625 gtgtccgtgtcgtgtccagtatccgtgtccgtgctt 35123660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 6389785 - 6389695
Alignment:
Q  103 attacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||||||| | || || | ||||||||| | |||| || ||||  ||||||||||||||||| || || || ||||||||||||    
T  6389785 attacactaaattatatcattttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgtgcttcat 6389695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 6898221 - 6898271
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    ||||||||||||||||||| || |||||||||||| || |||| |||||||    
T  6898221 ctatgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacg 6898271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 7996391 - 7996485
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||||| |||||| |||| || | |||||||||||||||| ||  |||| |||||| |||| ||| | || || ||||| |||||||||    
T  7996391 tataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtccttgtcatgtactgtgtctgtatctgtgcttcat 7996485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 8022410 - 8022316
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||||| |||||| |||| || | |||||||||||||||| ||  |||| |||||| |||| ||| | || || ||||| |||||||||    
T  8022410 tataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtccttgtcatgtactgtgtctgtatctgtgcttcat 8022316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 10888987 - 10889053
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    |||||| ||||||||||||||||| || | ||||||||||| ||||    |||||||||||||||||    
T  10888987 tataatcacactaaattatgtgattttatcaaattattagcggtgtctatgtgtcggtgtccgtgtc 10889053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 16833352 - 16833282
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||| || |||||||| |||| ||||||||||  |||| || ||||| ||||| |||||||||||    
T  16833352 taattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtcc 16833282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 17327590 - 17327640
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||| ||||||||||||| | ||||| ||||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacg 17327640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 17341676 - 17341746
Alignment:
Q  98 ttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtg 168  Q
    ||||||||||||| ||||||||||| || | ||||||||| | |||| || ||||| ||| ||||||||||    
T  17341676 ttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgtgtcgtg 17341746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 32298603 - 32298668
Alignment:
Q  82 tgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttgg 147  Q
    |||| ||||| ||||  ||||||||||||||||||||||||  | | ||||||||||| |||||||    
T  32298603 tgtctgacaccaacacatataattacactaaattatgtgatgatcttaaattattagcggtgttgg 32298668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 75
Target Start/End: Original strand, 32511606 - 32511639
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtg 75  Q
    |||||||||||| |||||||||||||||||||||    
T  32511606 ctatgaagcacggacactcctccgattaggcgtg 32511639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 32511667 - 32511724
Alignment:
Q  87 gacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgt 144  Q
    ||||| |||| ||||||||||||| ||||||||||| || | ||||||||||| ||||    
T  32511667 gacaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgt 32511724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 3209426 - 3209347
Alignment:
Q  101 taattacactaaattatgtga-tattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||| |||||||||||||||| | |||| ||||||||||| |||| || ||||| |||| |||||||||||| || |||||    
T  3209426 taataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtctgtgt-cgtgtcgtgtccggtgtccgt 3209347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 3209519 - 3209483
Alignment:
Q  41 tctatgaagcacgaacactcctccgattaggcgtgtc 77  Q
    |||||||||||| |||||||||| |||||||||||||    
T  3209519 tctatgaagcacaaacactcctcggattaggcgtgtc 3209483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 4878061 - 4878014
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||| ||||||||| ||||||||||||| | ||||||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgtc-ctgtgtcggaca 4878014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 7151458 - 7151410
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttgg 147  Q
    |||||||||||| ||||||||||| |||| ||||||||||  |||||||    
T  7151458 tataattacacttaattatgtgattttttcaaattattagaggtgttgg 7151410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 7625237 - 7625185
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||||||||||||||  ||||| ||||||  | ||||||||||||    
T  7625237 atctatgaagcacgaacactccttggattaagcgtgttccggtgtcggacacg 7625185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 7977770 - 7977818
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||||||||||||  |||||||||||| ||  |||||||||    
T  7977770 ctatgaagcacgaacactccttagattaggcgtgtttcgttgtcggaca 7977818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 9107296 - 9107348
Alignment:
Q  39 catctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    |||||||||||||||  |||||||| ||||||| ||||| | |||||||||||    
T  9107296 catctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacac 9107348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 9911481 - 9911517
Alignment:
Q  41 tctatgaagcacgaacactcctccgattaggcgtgtc 77  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  9911481 tctatgaagcatgaacactcctcggattaggcgtgtc 9911517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 19044510 - 19044442
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgt 167  Q
    |||||| ||||| |||||||||||||| | ||||||||||  |||| || ||||| |||||| ||||||    
T  19044510 tataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtccatgtcgt 19044442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 26562735 - 26562671
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtg 163  Q
    |||||||||||| ||||||||||| || | ||||| |||||||||| || ||||| |||| ||||    
T  26562735 tataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcgtg 26562671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 28152142 - 28152079
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    |||||||||| ||||||||||| |||| |||||||||||  ||| || ||||| |||||||||||    
T  28152142 taattacactgaattatgtgat-ttttcaaattattagctttgtcggcgtgtcagtgtccgtgtc 28152079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 32248938 - 32248974
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattat 135  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  32248938 tataattaccctaaattatgtgattttttaaaattat 32248974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 34595255 - 34595203
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||||| ||||||||| ||||||| ||||| | ||||| ||||||    
T  34595255 atctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacg 34595203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 9e-26; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 20539632 - 20539781
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcag 141  Q
    |||||||||||| ||||||||| ||| ||||||||||| |   || ||||  ||| || ||||||||||||||||| |||| |||| ||||||||||| |    
T  20539632 ctatgaagcacggacactcctcggatcaggcgtgtctc-gccacg-acaccgacacttgtaattacactaaattatatgattttttcaaattattagctg 20539729  T
Q  142 tgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||| |  ||||| |||||||||||||||||||| ||||||||||||||||||    
T  20539730 tgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatccgtgcttcat 20539781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 193
Target Start/End: Original strand, 21782832 - 21782925
Alignment:
Q  100 ataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||| ||||||||||| || | |||||||||||||||| || ||||| ||||  |||||||||||||| || |||| ||||||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtattcgtgcttcat 21782925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 21616822 - 21616737
Alignment:
Q  85 cggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtc 170  Q
    |||||||| |||  |||||||||||| ||||||||||| || | ||||||||||| |||| || ||||| ||||||||||||||||    
T  21616822 cggacacgtacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 26769644 - 26769591
Alignment:
Q  39 catctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  26769644 catctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacg 26769591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 23718072 - 23717979
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||||| ||||||||||  || | ||||||||||| |||| || ||||| ||||||||||| ||||| || || |||||||||||||||    
T  23718072 tataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcat 23717979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 24105744 - 24105651
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||||| ||||||||||  || | ||||||||||| |||| || ||||| ||||||||||| ||||| || || |||||||||||||||    
T  24105744 tataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcat 24105651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 19536412 - 19536505
Alignment:
Q  101 taattacactaaattatgtgatatttta-aaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||| ||||||||||| ||||  ||||||||||  |||| || |||||  |||||||||||||||| || |||||||| |||||||||    
T  19536412 taattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcat 19536505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 165
Target Start/End: Original strand, 42832234 - 42832355
Alignment:
Q  44 atgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtg 143  Q
    |||||||| | ||||||||  ||||||||||||| | | |||||||||  ||| ||||||||||||| || ||||| || || | ||||||||||| |||    
T  42832234 atgaagcaaggacactccttggattaggcgtgtcccggagtcggacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtg 42832333  T
Q  144 ttggagtgtcggtgtccgtgtc 165  Q
    | || ||||| | |||||||||    
T  42832334 tcggtgtgtctgagtccgtgtc 42832355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 31018636 - 31018568
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgt 167  Q
    |||||||||||||||| ||||||| || | ||||||||||| ||||||| ||||| |||||| ||||||    
T  31018636 tataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgt 31018568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 21374714 - 21374807
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc--gtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||| |||||||| || |||| ||||||||||| |||| || ||||  |||||||||||  |||||| || ||||||||||||||||||    
T  21374714 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtcc-gtgtccgtatccgtgcttcat 21374807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 30404865 - 30404943
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||||| ||||||||||| |||| ||||||||| | |||| || ||||| ||||||||||| ||||| ||||||||    
T  30404865 taattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtcc-gtatccgt 30404943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 34784995 - 34785066
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtc 170  Q
    |||||||||||||||||||||||| || |||||  |||||  |||| || ||||| ||||||||||||||||    
T  34784995 tataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtc 34785066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 6940299 - 6940233
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgt 167  Q
    |||||||||| |||||||| |  |||||||||||||||| |||| || ||||| |||||||||||||    
T  6940299 taattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgt 6940233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 18422007 - 18421941
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgt 167  Q
    |||||||||| |||||||||||||||| |||||||||   |||| || ||||| |||||||||||||    
T  18422007 taattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtcgt 18421941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 35056998 - 35056948
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||| |||||||||||| || ||||||||||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacg 35056948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 37419873 - 37419823
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||| ||||||||||||| | ||||||||||||    
T  37419873 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacg 37419823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 21624287 - 21624218
Alignment:
Q  124 ttttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||||||||| |||| || ||||| ||||| ||||||||| | || |||||||||| |||||||    
T  21624287 ttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatccgggcttcat 21624218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 34993922 - 34993971
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    |||||||||||||||||||||   |||||||||||| |||||||||||||    
T  34993922 ctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacac 34993971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 40361749 - 40361854
Alignment:
Q  81 gtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    ||||| ||||| ||||  ||||||||||||||||||||| || |||| |||||||||  |||||   |||||| || || ||||||||| | ||||||||    
T  40361749 gtgtctgacaccaacagatataattacactaaattatgtaattttttcaaattattaatagtgtcatagtgtccgtatctgtgtcgtgttcggtatccgt 40361848  T
Q  181 atccgt 186  Q
     |||||    
T  40361849 gtccgt 40361854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 10535684 - 10535720
Alignment:
Q  41 tctatgaagcacgaacactcctccgattaggcgtgtc 77  Q
    ||||||||||||||||||||||| |||||||||||||    
T  10535684 tctatgaagcacgaacactcctcggattaggcgtgtc 10535720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 30335468 - 30335392
Alignment:
Q  94 acatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtc 170  Q
    |||||| ||||||||||||||||||| || |||| ||||||||||  |||| || |||   ||||||||||||||||    
T  30335468 acatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtc 30335392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 44635612 - 44635568
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcg 86  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||||    
T  44635612 ctatgaagcacggacactcctcagattaggcgtgtctcggtgtcg 44635568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 2665901 - 2665940
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattag 138  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  2665901 tataattacactaaattatgtgattttctaaaattattag 2665940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 24894433 - 24894370
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgt 164  Q
    ||||| |||| ||||||||||| |||| ||||||||||| |||| || ||||| ||||||||||    
T  24894433 taattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtgt 24894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 29367281 - 29367332
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    ||||||||||||| |||| ||||| |||||||| |||||| |||||||||||    
T  29367281 atctatgaagcacaaacattcctcggattaggcatgtctcggtgtcggacac 29367332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 2438661 - 2438707
Alignment:
Q  44 atgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||| ||||||||| ||||||||||||| | ||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggaca 2438707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 20242740 - 20242833
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||||| ||||||||||| || |||||  |||||  |||| || ||||| |||||| |||||||| | ||  |||||||||||||||||    
T  20242740 tataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtccatgtcgtgt-ctgtgcccgtatccgtgcttcat 20242833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 27084388 - 27084338
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    ||||||||||   ||||||||||||||||||||||||| |||| |||||||    
T  27084388 ctatgaagcagagacactcctccgattaggcgtgtctcggtgttggacacg 27084338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 28412395 - 28412325
Alignment:
Q  100 ataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtc 170  Q
    ||||||||||| ||||||||||| || | ||||||||| | ||||||  ||||  ||||||||||||||||    
T  28412395 ataattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtc 28412325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 30527608 - 30527674
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    ||||||||||||||||||| |||| || | ||||||||| |||||| || ||||| ||||| |||||    
T  30527608 tataattacactaaattatatgattttctcaaattattaacagtgtgggtgtgtcagtgtcagtgtc 30527674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 33519800 - 33519738
Alignment:
Q  131 attattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||| |||| || ||||| || |||| ||||||||| || ||||||||||||||||||    
T  33519800 attattagcggtgtcggtgtgtcagtatccgcgtcgtgtccggtgtccgtatccgtgcttcat 33519738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 36409641 - 36409711
Alignment:
Q  100 ataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtc 170  Q
    ||||||||||||||||||||||| |||| ||||||| ||| |||| ||  |||  || |||||||||||||    
T  36409641 ataattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 38117099 - 38117149
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| |||| |||| ||||||||||||| | ||||||||||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacg 38117149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 42511322 - 42511372
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||| |||||| |||||| | ||||||||||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacg 42511372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 11223792 - 11223841
Alignment:
Q  41 tctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    ||||||||||||| ||||||||| ||||||||||||| | ||||| ||||    
T  11223792 tctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca 11223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 12224337 - 12224292
Alignment:
Q  47 aagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||| |||||||||  ||||||||||||| ||||||||||||||    
T  12224337 aagcacaaacactccttggattaggcgtgtcccagtgtcggacacg 12224292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 14996238 - 14996330
Alignment:
Q  101 taattacactaaattatgtga-tattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||||||||| ||| | |||| ||||||||||| |||| ||  |||| ||||||||||| ||| | |  ||||||||||||||||||    
T  14996238 taattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtcatgt-ctgcgtccgtatccgtgcttcat 14996330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 15657915 - 15657838
Alignment:
Q  94 acatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||| |||||||||| ||||||||||| |||  ||||||||||  | || || ||||  |||||||||||||||||    
T  15657915 acatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtcc 15657838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 15909570 - 15909619
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    ||||||||||||||||||| ||  |||||||||||| | |||||||||||    
T  15909570 ctatgaagcacgaacactcttcgaattaggcgtgtccctgtgtcggacac 15909619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 16069268 - 16069333
Alignment:
Q  100 ataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    ||||||||||| |||||| |||| |||| ||||||||| | |||| || ||||| |||||||||||    
T  16069268 ataattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 18840944 - 18841001
Alignment:
Q  33 aggttgcatctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||| ||| |||||||||||| ||||||||| ||||||| ||||| | ||||||||||    
T  18840944 aggtggcaactatgaagcacggacactcctcggattaggtgtgtcccggtgtcggaca 18841001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 28596587 - 28596538
Alignment:
Q  43 tatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    ||||||||||| ||||||||| ||||||| |||||  |||||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacg 28596538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 28677955 - 28677910
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgt 144  Q
    |||||||||||| ||||||||||| |||| ||||||||||| ||||    
T  28677955 tataattacactgaattatgtgattttttcaaattattagcggtgt 28677910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 30717545 - 30717610
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcg 166  Q
    |||||||||| ||||||||||| |||| |||||||||||  ||| ||  |||| ||||||||||||    
T  30717545 taattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgtgtcg 30717610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 32749750 - 32749803
Alignment:
Q  38 gcatctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    ||||||||||||| || ||||||||  ||| ||||||||| |||||||||||||    
T  32749750 gcatctatgaagcgcggacactccttagataaggcgtgtcccagtgtcggacac 32749803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 6180790 - 6180838
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||| | ||||||| ||||||| |||||||||| |||||||    
T  6180790 ctatgaagcacggaaactcctcagattaggtgtgtctcagtatcggaca 6180838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 12940943 - 12941019
Alignment:
Q  94 acatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtc 170  Q
    |||||| |||||||||| |||||| |||| |||| ||||||||||  ||||    ||||| ||||||||||||||||    
T  12940943 acatttgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtc 12941019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 24975252 - 24975304
Alignment:
Q  39 catctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    ||||||||||||||| ||||||||| ||||||   |||| |||||||||||||    
T  24975252 catctatgaagcacggacactcctcagattagatttgtcccagtgtcggacac 24975304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 28602361 - 28602393
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaa 131  Q
    |||||||||| ||||||||||||||||||||||    
T  28602361 tataattacattaaattatgtgatattttaaaa 28602393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 31808123 - 31808063
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtc 159  Q
    |||||||||||| ||||||||||| || | ||||||||||| |||| || ||||| |||||    
T  31808123 tataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgtc 31808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 37559021 - 37558957
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    |||||||| | ||||||||||| |||  ||||||||||| |||| || ||||| |||||||||||    
T  37559021 taattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtc 37558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 22013461 - 22013366
Alignment:
Q  98 ttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||||||||||||||| || |||  ||||||||||| |||| || ||||| ||||||||||||||||| || ||||||||||||||||||    
T  22013461 ttataattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcat 22013366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 19820437 - 19820501
Alignment:
Q  129 aaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||| |||| |||||||| ||||||||||||||||| || ||||||||||||||||||    
T  19820437 aaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcat 19820501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 21522794 - 21522724
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||| |||||||| || |||||||||||||||| |||| || ||||| |||||||||||||||||    
T  21522794 taattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 21522724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 21533360 - 21533290
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||| |||||||| || |||||||||||||||| |||| || ||||| |||||||||||||||||    
T  21533360 taattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 21533290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 193
Target Start/End: Complemental strand, 2437030 - 2436880
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacga-----acatttataattacactaaattatgtgatattttaaaattatt 136  Q
    |||||||||||||||||||||| ||||||||||||||  |||||||||||||     |||  |||||| |||   ||||||||||| |||  ||||||||    
T  2437030 ctatgaagcacgaacactcctcggattaggcgtgtcttggtgtcggacacgacaccgacacatataatcacaacgaattatgtgatttttgcaaattatt 2436931  T
Q  137 agcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||| |||| ||       ||||| ||||||||||| || ||||||||||||||||||    
T  2436930 agcggtgtcgg------cgtgtcagtgtcgtgtccggtgtccgtatccgtgcttcat 2436880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 165
Target Start/End: Complemental strand, 14674370 - 14674249
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcag--tgtcggacacgaacatttataattacactaaattatgtgatattttaaaattatta 137  Q
    |||||||||||||  ||||||||| ||||||| ||||||| |  |||| |||||      || |||||||||||||||||||||| |||| |||||||||    
T  14674370 atctatgaagcacagacactcctcggattaggtgtgtctcggcctgtccgacac------ttgtaattacactaaattatgtgattttttcaaattatta 14674277  T
Q  138 gcagtgttggagtgtcggtgtccgtgtc 165  Q
    || |||| || ||||| |||||||||||    
T  14674276 gctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 6326253 - 6326391
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcag 141  Q
    |||||||||||| ||||| |||  |||||||||||  | ||||| ||| |  ||| || |||||||||| |||||||| || || | |||||| ||||      
T  6326253 ctatgaagcacggacacttctcgaattaggcgtgttccggtgtccgacgctgacacttgtaattacactgaattatgtaattttctcaaattactagcga 6326352  T
Q  142 tgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    ||| || ||||| ||||||||||||||||| ||||||||    
T  6326353 tgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgt 6326391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 21191071 - 21191141
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||| ||||||||||| |||| ||||||||||| |||| ||  |||| |||||||||||||||||    
T  21191071 taattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtcc 21191141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 25888305 - 25888389
Alignment:
Q  98 ttataattacactaaattatgtgatatttt--aaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    ||||||||||||| |||||| |||| ||||  ||||||||||| |||||||| ||||| || |||||||||||||| || |||||    
T  25888305 ttataattacactgaattatatgattttttttaaaattattagtagtgttggtgtgtctgtatccgtgtcgtgtcctgtgtccgt 25888389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 6247666 - 6247574
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||| ||||||||||| |||| ||||||||||  |||| || ||||| |||| ||| |||||||| || |||| ||||||| |||||    
T  6247666 taattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccgcatccgtgtttcat 6247574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 21576760 - 21576847
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||| ||||||||||| |||| ||||||||||| ||||||| || || ||||     ||||||||||| || |||||||||||||||    
T  21576760 taattacactgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgt-----tcgtgtccagtgtctgtatccgtgcttcat 21576847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 21576685 - 21576735
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||| ||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacg 21576735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 24906316 - 24906386
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||| |||||||| || |||| ||||||||| | ||||||| ||||| |||| ||||||||||||    
T  24906316 taattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtcc 24906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 39268541 - 39268587
Alignment:
Q  45 tgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    ||||||||| ||||||||| ||||||||||||| |||||||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacac 39268587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 39698671 - 39698625
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcgga 88  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 39698625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 19820327 - 19820376
Alignment:
Q  41 tctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    ||||||||||||| ||||||||| ||||||||||||| | ||||||||||    
T  19820327 tctatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 19552562 - 19552626
Alignment:
Q  105 tacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgt 169  Q
    |||||| ||||||||||| |||| ||||||||| | |||| || ||||| |||||||||||||||    
T  19552562 tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 37328859 - 37328951
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||| |||| |||||| |||  |||||||| || |||| || || || ||||||||||||||| | || ||||| ||||||||||||    
T  37328859 taattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgttcggtgtccgtgtccgtgcttcat 37328951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 40000555 - 40000639
Alignment:
Q  106 acactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgctt 190  Q
    ||||| ||||||||||| |||| |||||||||  ||||| |   |||| |||||||||||||  ||| |||||||||||||||||    
T  40000555 acactgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgtgtcgtacccaatatccgtatccgtgctt 40000639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 169
Target Start/End: Original strand, 22423761 - 22423895
Alignment:
Q  39 catctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacga-----acatttataattacactaaattatgtgatattttaaaatt 133  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||   | |||||||     |||| |||||||| | | ||||||||||| || | |||||    
T  22423761 catctatgaagcacggacactcctcggattaggcgtgtc-cagacaccgacacgacaccgacatatataattatattgaattatgtgattttctcaaatt 22423859  T
Q  134 attagcagtgttggagtgtcggtgtccgtgtcgtgt 169  Q
    ||||| |||||  | ||||| || ||||||||||||    
T  22423860 attagtagtgtcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 31084448 - 31084397
Alignment:
Q  41 tctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||| |||| ||||||||| |||||||| |||| ||||||||||||||    
T  31084448 tctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacg 31084397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 186
Target Start/End: Original strand, 13287417 - 13287499
Alignment:
Q  104 ttacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    ||||||| ||||||||||| |||| ||||||||| | |||| |  ||||  ||||||||||||||||| || ||||| |||||    
T  13287417 ttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgtgtccgt 13287499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 14422949 - 14422878
Alignment:
Q  98 ttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    ||||||||||||| ||||||||||| |||  ||||||||||| || | || ||||| |||||| ||||||||||    
T  14422949 ttataattacactgaattatgtgattttt--aaattattagctgtatcggtgtgtcagtgtccttgtcgtgtcc 14422878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 14873641 - 14873591
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||| ||||||||||||| | |||| |||||||    
T  14873641 ctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacg 14873591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 16203808 - 16203874
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    |||||||||||||||||||| ||| || | |||||||||||||||| ||  |||  |||||||||||    
T  16203808 tataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtc 16203874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 27144509 - 27144443
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    |||||||||||||||||||||||| |  | ||||||||||| |||| || ||||| ||||| |||||    
T  27144509 tataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtc 27144443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 33178069 - 33178032
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattag 138  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  33178069 taattacactaaattatgtgatttttttaaattattag 33178032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 36642774 - 36642847
Alignment:
Q  98 ttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    ||||| |||||||||| ||||| |  |||| ||||||||| | |||| || ||||| |||||||||||||||||    
T  36642774 ttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtcc 36642847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 39698585 - 39698524
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgt 162  Q
    |||||||||| ||||||||||| |||| ||||||||||| ||||  | ||||| ||||||||    
T  39698585 taattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgt 39698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 41633786 - 41633709
Alignment:
Q  94 acatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||| |||||||||| |||||||| |  |||| ||||||||||| |||| |||||||| || || |||| ||||||    
T  41633786 acatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgtcagtatctgtgtggtgtcc 41633709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 41995515 - 41995430
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    |||||||| | ||||||||||| ||||  |||||||||  |||| || ||||| ||||| ||||||| |||||| ||||| |||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccgtgtccgt 41995430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 12927705 - 12927625
Alignment:
Q  94 acatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagt 174  Q
    |||| ||||||||||||||||||| |||| || | |||||||||||  ||| || ||||| ||||| || || ||||||||    
T  12927705 acatatataattacactaaattatatgattttctcaaattattagcgatgtcggtgtgtccgtgtctgtatcatgtccagt 12927625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 17123166 - 17123119
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||| ||||||||| ||||||||||||| | ||||||||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgtc-ccgtgtcggaca 17123119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 21190998 - 21191046
Alignment:
Q  44 atgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||| ||||||||| ||||||||||||| | | ||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacg 21191046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 43001844 - 43001780
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    |||||||||| |||||||| || |||| |||||||||||||||| |   |||| |||||||||||    
T  43001844 taattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtc 43001780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 135263 - 135419
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacga-----acatttataattacactaaattatgtgatattttaaaattatt 136  Q
    ||||||||||||||||| |||| |||||||||||||   |||||||||||||     |||  |||||||||||  ||||||||||| || | ||||||||    
T  135263 ctatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggacacgacaccgacacatataattacacagaattatgtgattttctcaaattatt 135362  T
Q  137 agcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||| || |||| |||||| ||||||| | | || ||||||||| ||||||||    
T  135363 agcagtgtcggtgtgttggtgtctgtgtcgtattcggtgtccgtatccatgcttcat 135419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 9e-20; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 40 - 170
Target Start/End: Complemental strand, 11610630 - 11610496
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacga----acatttataattacactaaattatgtgatattttaaaattat 135  Q
    |||||||||||||| ||||||||| ||||||||||||| |  ||||||||||||    ||| || ||| |||||| ||||||||||| |||| |||||||    
T  11610630 atctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacacgacttgacacttgtaactacactgaattatgtgatttttttaaattat 11610531  T
Q  136 tagcagtgttggagtgtcggtgtccgtgtcgtgtc 170  Q
    |||| ||||||| ||||| || || |||| |||||    
T  11610530 tagcggtgttggcgtgtcagtatctgtgttgtgtc 11610496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 8383321 - 8383213
Alignment:
Q  81 gtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    ||||| |||||  ||| ||||||||||||| |||||| |||| || | ||||||||||| |||| || |||||  ||||||||||||||||||| |||||    
T  8383321 gtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgt 8383222  T
Q  181 atccgtgct 189  Q
     ||||||||    
T  8383221 gtccgtgct 8383213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 10335249 - 10335380
Alignment:
Q  46 gaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgtt 145  Q
    ||||||||||||||||||| ||||||||||||   ||| | |||||  ||| || || |||||||||| |||||||  |||| ||||||||||  ||||     
T  10335249 gaagcacgaacactcctccaattaggcgtgtc---gtgcccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtc 10335345  T
Q  146 ggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    || ||||| ||||||||||||||||| || |||||    
T  10335346 ggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 10335380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 55401119 - 55401027
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||||||||||||||| |||| ||||||||||  |||| || || || ||||||||||||| ||| || |||||||| |||||||||    
T  55401119 taattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgtatctgtgcttcat 55401027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 14840303 - 14840382
Alignment:
Q  98 ttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatc 177  Q
    ||||||||||||| ||||||||||| || | |||||||||   ||||||| |||||||| ||||||||||||||||||||    
T  14840303 ttataattacactgaattatgtgattttctgaaattattaatggtgttggcgtgtcggtatccgtgtcgtgtccagtatc 14840382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 14216950 - 14216845
Alignment:
Q  87 gacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    |||||| ||| || |||||||||| |||||| ||||||||||||||||||||  |||| |  ||||| ||||||||||||||| | || |||| ||||||    
T  14216950 gacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgt-ctgtgtccgcatccgt 14216852  T
Q  187 gcttcat 193  Q
    |||||||    
T  14216851 gcttcat 14216845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 14223079 - 14222974
Alignment:
Q  87 gacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    |||||| ||| || |||||||||| |||||| ||||||||||||||||||||  |||| |  ||||| ||||||||||||||| | || |||| ||||||    
T  14223079 gacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgt-ctgtgtccgcatccgt 14222981  T
Q  187 gcttcat 193  Q
    |||||||    
T  14222980 gcttcat 14222974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 198
Target Start/End: Complemental strand, 8842393 - 8842277
Alignment:
Q  81 gtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    ||||| |||||  |||| ||||||||||| |||||||||||| ||| |||||||||||| |||| ||  ||||  | |||||||||| ||| || |||||    
T  8842393 gtgtctgacaccgacatatataattacaccaaattatgtgat-tttcaaaattattagcggtgtcggcatgtcaatttccgtgtcgtatccggtgtccgt 8842295  T
Q  181 atccgtgcttcatggggt 198  Q
    ||||||||||||| ||||    
T  8842294 atccgtgcttcatagggt 8842277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 8587036 - 8587128
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||| ||||||||||| |||| |||||| |||  |||| || ||||| ||||||||||| ||||| || |||||||| |||||||||    
T  8587036 taattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgtatctgtgcttcat 8587128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 32429331 - 32429487
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacga-----acatttataattacactaaattatgtgatattttaaaattatt 136  Q
    |||||||| |||||||||||||||||||| |||||||  || |  |||| ||     | |||||||||| |||| ||||||||||| || | ||||||||    
T  32429331 ctatgaagtacgaacactcctccgattagacgtgtcttggtattcgacatgacaccgatatttataattgcactgaattatgtgattttcttaaattatt 32429430  T
Q  137 agcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||  ||| ||||||||  ||| ||||| |||||| || ||||||| ||||||||||    
T  32429431 agcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgtatacgtgcttcat 32429487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 25074914 - 25074864
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  25074914 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacg 25074864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 40052431 - 40052381
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||||||||||||| ||||||||||||| | ||||||||||||    
T  40052431 ctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacg 40052381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 55401194 - 55401144
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacg 55401144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 4201459 - 4201394
Alignment:
Q  82 tgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttgg 147  Q
    |||||||||| ||||| |||||||||||| ||||||||||| |||| ||||||||| | |||||||    
T  4201459 tgtcggacaccaacatatataattacacttaattatgtgattttttcaaattattaacggtgttgg 4201394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 10317998 - 10318113
Alignment:
Q  46 gaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgtt 145  Q
    ||||||||||||||||||| ||||||||||||   ||| | |||||  ||| ||||| ||||||||||  ||||||  |||| ||||||||||| ||||     
T  10317998 gaagcacgaacactcctccaattaggcgtgtc---gtgcccgacaccgacacttatatttacactaaa-aatgtgactttttcaaattattagctgtgtc 10318093  T
Q  146 ggagtgtcggtgtccgtgtc 165  Q
    || ||||| |||||||||||    
T  10318094 ggcgtgtcagtgtccgtgtc 10318113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 193
Target Start/End: Complemental strand, 25064954 - 25064861
Alignment:
Q  100 ataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||||||||||||||| |||| |||| |||||| |||| || |||||  |||| ||||||||||| || || ||| ||||| |||||    
T  25064954 ataattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccggtgtctgtacccgtgtttcat 25064861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 14747606 - 14747513
Alignment:
Q  101 taattacactaaattatgtga-tattttaaaattattagcagtgttggagtgtcggtgtccgtgtc--gtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||||||||||||| | |||| ||||||||||| |||| || ||||| |||| ||||||  |||||| |||||||||||||||||||||    
T  14747606 taattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgt-cgtgtccggtgtcc-gtatccgtatccgtgcttcat 14747513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 10268468 - 10268567
Alignment:
Q  68 taggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgt 167  Q
    |||||||||  | ||||| |||||  ||| || |||||||||||||||||||||| |||| ||||||||| | |||| || ||||| |||||| ||||||    
T  10268468 taggcgtgttccggtgtctgacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgt 10268567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 28918045 - 28917966
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||||| ||||||||||| |||| |||||||||||  ||| || ||||| || |||||||||||||| || |||||    
T  28918045 taattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgt 28917966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 21211413 - 21211363
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    ||||||||||| |||||||||| ||||||| ||||| ||||||||||||||    
T  21211413 ctatgaagcacaaacactcctcggattaggagtgtcccagtgtcggacacg 21211363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 180
Target Start/End: Original strand, 24205034 - 24205135
Alignment:
Q  78 tcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatc 177  Q
    |||||||| ||||||| || |||||||||||||  ||||||| || || | ||||||||| | |||| || ||||| ||||||||||||||||| || ||    
T  24205034 tcagtgtccgacacga-cacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 24205132  T
Q  178 cgt 180  Q
    |||    
T  24205133 cgt 24205135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 25948888 - 25948966
Alignment:
Q  87 gacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    ||||| |||| ||||||||||||| ||||||||||| |||| ||||||||||| || | ||  |||| |||||||||||    
T  25948888 gacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtc 25948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 41961579 - 41961629
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||| ||| ||||||||||||| ||||||||||||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacg 41961629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 11313813 - 11313858
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgt 144  Q
    |||||||||||||||||||||||| || | ||||||||||||||||    
T  11313813 tataattacactaaattatgtgattttctcaaattattagcagtgt 11313858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 25775624 - 25775575
Alignment:
Q  44 atgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacga 93  Q
    |||||||||||||||||||| |||||||||||||   |||||||||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacacga 25775575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 34185052 - 34185101
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    |||||||||||| ||||||||| ||||||||||||| | |||||||||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 34185101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 8842450 - 8842410
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctca 80  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  8842450 atctatgaagcacggacactcctcggattaggcgtgtctca 8842410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 27277852 - 27277896
Alignment:
Q  100 ataattacactaaattatgtgatattttaaaattattagcagtgt 144  Q
    ||||||||||||||||||||||| || | ||||||||||||||||    
T  27277852 ataattacactaaattatgtgattttctcaaattattagcagtgt 27277896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 1509583 - 1509540
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgt 144  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||    
T  1509583 taattacactaaattatgtgattttttcaaattattagctgtgt 1509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 3163971 - 3164022
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacga 93  Q
    |||||||||| | |||||||||  |||||||||||||| |||||||||||||    
T  3163971 ctatgaagcatggacactcctcgaattaggcgtgtctcggtgtcggacacga 3164022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 8789489 - 8789536
Alignment:
Q  43 tatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||| ||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgaca 8789536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 15796309 - 15796388
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||||| |||||| |||| |||| ||||||||| | |||| || |||||  |||||||||||||||| || |||||    
T  15796309 taattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15796388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 49505167 - 49505230
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgt 162  Q
    |||||||||||||||||||||||| || | ||||||||||| || |  | ||||||||||||||    
T  49505167 tataattacactaaattatgtgattttctcaaattattagcggtctctgcgtgtcggtgtccgt 49505230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 3610677 - 3610607
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||| | |||||| || |||| ||||||||| | ||||||| ||||| ||||| |||||||||||    
T  3610677 taattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtcgtgtcc 3610607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 8101892 - 8101942
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||||||||||||| |||||| |||||  ||||||| ||||||    
T  8101892 ctatgaagcacgaacactcctcagattagacgtgtaccagtgtccgacacg 8101942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 14979224 - 14979147
Alignment:
Q  102 aattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    ||||||||| ||||||||||| |||| ||||||||||| |||| || ||| |  ||||| |||||||||| ||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtgtcc-gtatccgt 14979147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 20503586 - 20503536
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||||| ||||||||| ||||||||||||| | ||||| ||||    
T  20503586 atctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagaca 20503536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 26492220 - 26492290
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||| |||| | |||| |||| |||||||||||  ||| || ||||| |||||||||||||||||    
T  26492220 taattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtcc 26492290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 27505370 - 27505320
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||| |||||||| |||| | ||||||||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacg 27505320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 4987306 - 4987363
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgt 158  Q
    |||||||||| ||||||||||| |||| ||||||||||| |||| || ||||| ||||    
T  4987306 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 4990982 - 4991067
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    |||||||||| |||||||| || || | ||| ||||||| |||| |||||||| || |||||||||||| | || ||||| |||||    
T  4990982 taattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgtgtccgt 4991067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 7928496 - 7928451
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgt 144  Q
    |||||||||||| ||||||||||| |||| ||||||||||| ||||    
T  7928496 tataattacactgaattatgtgattttttcaaattattagcggtgt 7928451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 10455836 - 10455755
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||||||| | |||| |||| || | | ||||||||||||||||| |||||  || | |||||||||||||| |||||    
T  10455836 tataattacacttagttatatgattttctcatattattagcagtgttggcgtgtcaatgcctgtgtcgtgtccagtgtccgt 10455755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 14209157 - 14209120
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattag 138  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  14209157 taattacactgaattatgtgattttttaaaattattag 14209120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 1509681 - 1509637
Alignment:
Q  47 aagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    ||||||| ||||||||||||||||||||||  | |||||||||||    
T  1509681 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 1509637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 3164043 - 3164119
Alignment:
Q  104 ttacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    ||||||| ||||||||||| |||| ||||||||||| |||| |  ||| |  |||||||||||||||| || |||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgt 3164119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 4987222 - 4987270
Alignment:
Q  44 atgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||| ||| ||||||||| ||||||||||||| | ||||||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacg 4987270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 10954994 - 10954911
Alignment:
Q  103 attacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttc 191  Q
    |||||||| ||||||||||| |||| ||||||||||  |||| || ||||| ||||     |||||||| || ||||||||||||||||    
T  10954994 attacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt-----tcgtgtccggtgtccgtatccgtgcttc 10954911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 18427000 - 18426932
Alignment:
Q  94 acatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgt 162  Q
    |||| |||||||||||  ||||||||||| |||| ||||||||||  |||| || ||||| ||||||||    
T  18427000 acatatataattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgtccgtgtccgt 18426932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 28918120 - 28918072
Alignment:
Q  44 atgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||| | ||||||||  ||||||||||||| ||||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacg 28918072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 38731264 - 38731224
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagc 139  Q
    ||||| |||||| ||||||||||| ||||||||||||||||    
T  38731264 tataactacactgaattatgtgattttttaaaattattagc 38731224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 40993275 - 40993323
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||| | ||||||||| ||||||||||||| | ||||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggaca 40993323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 55213007 - 55212971
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattatta 137  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  55213007 taattgcactaaattatgtgattttttaaaattatta 55212971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 20216 - 20124
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||| ||||||||||| |||| ||||||||||| |||| || |||||  |||||||||||||||| || |||||||| |||||||||    
T  20216 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcat 20124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 2572071 - 2572156
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    |||||||||||||||||||||| |||| ||||||||||  |||| |  |||||||| ||||||||||||||||| ||||| |||||    
T  2572071 taattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtgtccgtgtccgt 2572156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 138
Target Start/End: Complemental strand, 4948755 - 4948659
Alignment:
Q  41 tctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattag 138  Q
    ||||||||||||| |||||| | |||||||||||||||| ||||| |||||  ||| || |||||||||| ||||||||||| |||| ||||||||||    
T  4948755 tctatgaagcacgtacactcattcgattaggcgtgtctc-gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 8343360 - 8343290
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||||||||||||||| |||| |||||||||||  ||| || ||||||||||| |||||||||||    
T  8343360 taattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcgtgtcc 8343290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 22197757 - 22197836
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||||||||||||||||  |||| ||||||||||| ||||||| ||||  ||||| ||||||||||| || |||||    
T  22197757 taattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgtccgt 22197836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 186
Target Start/End: Original strand, 24362215 - 24362302
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    |||||||||||| |||||||||||  | | ||||||||||| |||| || ||||||||||| ||||||| ||| || |||||||||||    
T  24362215 tataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtatccgt 24362302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 14731791 - 14731713
Alignment:
Q  67 ttaggcgtgtctcagtgtcggacacga-acatttataattacactaaattatgtgatattttaaaattattagcagtgt 144  Q
    |||||||||||   ||||||||||||| |||  |||||||||||||||||||||||| || | ||||||||||||||||    
T  14731791 ttaggcgtgtcctggtgtcggacacgacacacatataattacactaaattatgtgattttctcaaattattagcagtgt 14731713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 20873113 - 20873043
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||||||||||||||| |||| ||||||||| |  ||| || ||||| |||||||||||||||||    
T  20873113 taattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtcc 20873043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 27213644 - 27213521
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcag 141  Q
    |||||||||||| ||||| ||| |||||| |||||| | ||||| |||||       |||||||||| | ||||||||||| || | |||||||||||||    
T  27213644 ctatgaagcacggacacttctcggattagccgtgtcccggtgtccgacaca------tataattacagtgaattatgtgattttctgaaattattagcag 27213551  T
Q  142 tgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    ||| || ||||| || ||||||||||||||    
T  27213550 tgtcggcgtgtctgtatccgtgtcgtgtcc 27213521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 15816141 - 15816205
Alignment:
Q  98 ttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgt 162  Q
    ||||||||||||||||||||||||| |||| ||||||||||  |||| || ||||| ||||||||    
T  15816141 ttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 39954292 - 39954352
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtc 159  Q
    |||||||||||||||||||||||| || | ||||||||||| |||| || |||||||||||    
T  39954292 tataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcggtgtc 39954352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 11944796 - 11944749
Alignment:
Q  41 tctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcgga 88  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||    
T  11944796 tctatgaagcacgaacactcatcggattaggcgtgtctcggtgtcgga 11944749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 22652009 - 22651950
Alignment:
Q  112 aattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    ||||||||||| |||| ||||||||||| |||| || ||||| |||||||||||||||||    
T  22652009 aattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 22651950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 25192359 - 25192454
Alignment:
Q  98 ttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||| ||| |||||||| |  |||| ||||||||||| |||| || ||||| |||||||| ||||||||  | ||||||| ||||||||||    
T  25192359 ttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgtattcgtgcttcat 25192454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 926800 - 926882
Alignment:
Q  98 ttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    ||||||||||||| ||  ||| ||| || | |||||||||| |||||||| ||||| ||||||||||||||||| || |||||    
T  926800 ttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 926882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 29510319 - 29510389
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||| ||| |||| |||||| |||| ||||||||||| |||| || ||||| |||||||||||||||||    
T  29510319 taattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 29510389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 13436990 - 13437071
Alignment:
Q  112 aattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||| |||| ||||||||||| |||| || ||||| |||||| |||| ||||| || ||| | ||||||||||||    
T  13436990 aattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccatgtccgtgcttcat 13437071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 30077388 - 30077461
Alignment:
Q  87 gacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtcc 160  Q
    |||||| ||| || |||||||||| ||||||||||| |||| ||||||||||| | ||||| ||||| ||||||    
T  30077388 gacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtccgtgtcc 30077461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 4298901 - 4298992
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||| ||||||||||||| |||| ||||||||| | |||| || ||||  || || ||||||||||| || ||| ||||||||||||||    
T  4298901 taattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtcc-gtgtccatatccgtgcttcat 4298992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 13844609 - 13844669
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtc 159  Q
    |||||||||||| ||||||||||| || | |||||||||||||||| || ||||| |||||    
T  13844609 tataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtc 13844669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 18407838 - 18407790
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||| |||||||||| ||||||||||||  |||||||||||    
T  18407838 ctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggaca 18407790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 31557040 - 31556949
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||| ||||||||||| |||| ||||||||| | |||| || ||||| ||| || |||| ||||| || ||||||||||| ||||||    
T  31557040 taattacactgaattatgtgat-ttttcaaattattaactgtgtcggcgtgtcagtgaccatgtcatgtccggtgtccgtatccgtacttcat 31556949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 34222993 - 34222922
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||||| ||||||||||| || | |||||||||||  ||||||  ||||||||| ||||||||||||    
T  34222993 tataattacacttaattatgtgattttattaaattattagcgatgttgg-ctgtcggtgttcgtgtcgtgtcc 34222922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 191
Target Start/End: Original strand, 41838144 - 41838228
Alignment:
Q  107 cactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttc 191  Q
    |||| ||||||||||| |||| ||||||||||| |||| |  ||||| |||||||| |||||||   | ||||||||||||||||    
T  41838144 cactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtcttatgtccgtatccgtgcttc 41838228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 22204762 - 22204711
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacga 93  Q
    |||| ||||| ||||||||||  |||||| ||||||||||||||||||||||    
T  22204762 ctataaagcatgaacactccttggattagacgtgtctcagtgtcggacacga 22204711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 29447576 - 29447525
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    |||||||||||||| |||||||||||||||| | |||| | |||||||||||    
T  29447576 atctatgaagcacggacactcctccgattagacctgtcccggtgtcggacac 29447525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 34451050 - 34451144
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcatg 194  Q
    ||||||||||||  ||| |||||| ||  ||||  |||||| ||||  | ||||||||| ||||||||||||| || |||||||||||||||||||    
T  34451050 tataattacactgcattttgtgattttcaaaaaaaattagctgtgtcagtgtgtcggtgcccgtgtcgtgtcc-gtgtccgtatccgtgcttcatg 34451144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 949205 - 949251
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcgga 88  Q
    |||||||||||||||| ||||| ||||||| ||||||| ||||||||    
T  949205 ctatgaagcacgaacattcctcagattaggagtgtctcggtgtcgga 949251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 5813707 - 5813661
Alignment:
Q  46 gaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||| |||||||||| |||||||||||| | ||||||||||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacg 5813661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 8343016 - 8342978
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagc 139  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  8343016 taattacactaaattatgtgattttttcaaattattagc 8342978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 13203687 - 13203593
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||||| |||||||| || || | ||||||||||   |||||  || || ||||  ||||||||||  |||||||||||||||||||||    
T  13203687 tataattacactgaattatgtaattttctcaaattattagtgttgttgacgtatcagtgtttgtgtcgtgtcgggtatccgtatccgtgcttcat 13203593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 29510233 - 29510283
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||| ||||||| ||||| | ||||||||||||    
T  29510233 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacg 29510283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 33405397 - 33405479
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgta 181  Q
    |||||||||||||||||||||| | || | ||||||||| ||| |   | ||||| |||||| ||||||||||||| ||||||    
T  33405397 tataattacactaaattatgtgtttttctcaaattattaacagggccagtgtgtcagtgtccatgtcgtgtccagtgtccgta 33405479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 40332195 - 40332157
Alignment:
Q  155 gtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  40332195 gtgtccgtgtcgtgtccggtgtccgtatccgtgcttcat 40332157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 4673440 - 4673525
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    |||||||||| |||| | |||| |||| ||||||||| | |||| || ||||| ||||| |||||||||||  | |||||||||||    
T  4673440 taattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtatccgt 4673525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 12570521 - 12570594
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcca 172  Q
    |||||||||||| ||||||||| | || | ||||||||||||||||    ||||||||||| || |||||||||    
T  12570521 tataattacacttaattatgtgtttttcttaaattattagcagtgtcaacgtgtcggtgtctgtatcgtgtcca 12570594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 22652106 - 22652057
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    |||||||||||| ||||||||| |||||| |||||| | |||||||||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacac 22652057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 28385007 - 28385088
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||||||| ||||||| ||| | || | ||||||| | |||| ||  |||| ||||||||||||||| ||||||||||    
T  28385007 tataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgtgtcgtgttcagtatccgt 28385088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 30067968 - 30068017
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    |||||||||||| |||||| || ||||||| ||||| |||||||||||||    
T  30067968 ctatgaagcacggacactcatcggattaggtgtgtcccagtgtcggacac 30068017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 126392 - 126455
Alignment:
Q  129 aaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||| ||||||| ||||| || ||||| |||||||| || | ||||||||||||||||    
T  126392 aaattattagcggtgttggcgtgtcagtatccgtatcgtgtcc-gtgtgcgtatccgtgcttcat 126455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 13397670 - 13397622
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||| ||||||||   |||||||||||||| ||||||||||    
T  13397670 ctatgaagcacggacactccttgaattaggcgtgtctcggtgtcggaca 13397622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 36450769 - 36450833
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    |||||||||| |||| |||||| |||| ||||||||||  |||| || ||||| |||||||||||    
T  36450769 taattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 36450833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 241639 - 241559
Alignment:
Q  100 ataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    ||||||||||||||||||||||| |||  ||||||||||| |||| || ||||| ||||||||||||||||| || |||||    
T  241639 ataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 241559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 241726 - 241674
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||||| ||||| ||| ||||||||||||| | ||||||||||||    
T  241726 atctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacg 241674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 8e-17; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 24105722 - 24105631
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||| ||| |||  || |||| ||||||||||| |||| || ||||| ||||||||||||||||| |||||||||||||||||||||    
T  24105722 taattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc-gtatccgtatccgtgcttcat 24105631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 27945085 - 27944993
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||| |||||||| || || | ||||||||||  |||| || ||||| ||||||||||||||||| || ||||||||||||||||||    
T  27945085 taattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcat 27944993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 24339686 - 24339601
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    |||||||||| ||||||||||| |||| ||||||||||| |||| || |||||  ||||| |||||||||| || |||||||||||    
T  24339686 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccggtgtccgtatccgt 24339601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 43027487 - 43027576
Alignment:
Q  104 ttacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||  |||||||||| |||| ||||||||||| | || |  ||||| |||||||||||||||||||| |||| |||||||||||||    
T  43027487 ttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccgcatccgtgcttcat 43027576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 11061091 - 11061157
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgt 167  Q
    |||||| ||||||||||||||| |||| ||||||||||| |||| || ||||| |||||||||||||    
T  11061091 taattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgt 11061157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 30813916 - 30813788
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtg-tctcagtgtcggacacg-aacatttataattacactaaattatgtgatattttaaaattattagc 139  Q
    |||||||||||| ||||||||| ||||||||||| ||| | ||||||||||| ||||  | |||||||||| |||||||| || || | |||||||||||    
T  30813916 ctatgaagcacggacactcctcggattaggcgtgttctga-tgtcggacacgcaacacctgtaattacactgaattatgtaattttctcaaattattagc 30813818  T
Q  140 agtgttggagtgtcggtgtccgtgtcgtgt 169  Q
    | ||| ||||| || ||||| || ||||||    
T  30813817 aatgtcggagtatcagtgtctgtctcgtgt 30813788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 2034481 - 2034394
Alignment:
Q  105 tacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||||| ||||||| | ||||||||||  |||| |  ||||  || ||||||||||||| ||||||||||||||||||||||    
T  2034481 tacactaaattatatgatattctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtc-agtatccgtatccgtgcttcat 2034394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 5409771 - 5409821
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||| ||||||||||||| | ||||||||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacg 5409821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 7328704 - 7328798
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||||||||||||| || || | |||||||||||||| | |  ||||   |||| ||||||||| | || ||||||||||||||||||    
T  7328704 tataattacactaaattatgttattttctcaaattattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtatccgtgcttcat 7328798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 13770735 - 13770665
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||| |||||||| || |||| ||||||||||| |||| || || || |||||||||||||||||    
T  13770735 taattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 13770665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 171
Target Start/End: Complemental strand, 25481966 - 25481876
Alignment:
Q  81 gtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    ||||| ||||| |||| || |||||||||| ||||||||||| |||| ||||||||||| |||| || |||||  ||||| ||| ||||||    
T  25481966 gtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtcc 25481876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 17851477 - 17851396
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||||||| ||||||||||| || ||||||||||||| || | |  |||||||| ||| |||||||||| || |||||    
T  17851477 tataattacactgaattatgtgattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtccgt 17851396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 165
Target Start/End: Original strand, 18215144 - 18215265
Alignment:
Q  49 gcacgaacactcctccgattaggcgtgtctcagtgtcggacacga-----acatttataattacactaaattatgtgatattttaaaattattagcagtg 143  Q
    ||||| ||||||||| ||||||||||||| | |||||||||||||     ||| || ||| ||||||  |||||||||| |||| ||||||||||| | |    
T  18215144 gcacggacactcctcagattaggcgtgtcccggtgtcggacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcg 18215243  T
Q  144 ttggagtgtcggtgtccgtgtc 165  Q
    | || ||||  |||||||||||    
T  18215244 tcggcgtgttagtgtccgtgtc 18215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 19206096 - 19206015
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||| | | ||||||||||| || | ||||||||||| |||| || |||| |||||||||||||||||  ||||||||    
T  19206096 tataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtctggtatccgt 19206015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 4017806 - 4017882
Alignment:
Q  98 ttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagt 174  Q
    |||| ||||||||||||||| |  | || | ||||||||| | |||| || ||||||||||||||||||||||||||    
T  4017806 ttatgattacactaaattatatcgttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtccagt 4017882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 11722124 - 11722192
Alignment:
Q  112 aattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    ||||||||||| || | ||||| ||||| |||| || ||||| ||||||||||||||||| ||||||||    
T  11722124 aattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgt 11722192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 165
Target Start/End: Complemental strand, 15680873 - 15680789
Alignment:
Q  81 gtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    ||||| |||||  ||| ||||||||||||||||||||||||| ||||  ||||||||||  ||| || ||||| |||||| ||||    
T  15680873 gtgtccgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagtgtccatgtc 15680789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 18013087 - 18013155
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgt 167  Q
    |||||||||||| |||||||| || |||| |||||||||| |||||  || |||| |||||||||||||    
T  18013087 tataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgtgtcgt 18013155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 33994256 - 33994164
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||| |||| ||||||||||  |||| |||||| |||  | || || ||||| |||| ||||||||||| ||| ||||||||||||||||||    
T  33994256 taattgcactgaattatgtgaccttttcaaattagtagttgcgtcggcgtgtcagtgttcgtgtcgtgtcaagtgtccgtatccgtgcttcat 33994164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 5236032 - 5235949
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtat 182  Q
    ||||||||||||||||||| | || || | ||||||||||| |||| |  ||||| ||||| |||||||||||| | |||||||    
T  5236032 tataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtccaatgtccgtat 5235949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 20549909 - 20549862
Alignment:
Q  43 tatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||  |||||||| |||||||||||||||| |||||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggaca 20549862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 21864852 - 21864758
Alignment:
Q  101 taattacactaaattatgtgatatttta--aaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||||||||| |||| ||||   ||||||||||| ||||  | ||||| |||||||||||||||||  | |  |||||||||||||||    
T  21864852 taattacactaaattatatgattttttttcaaattattagctgtgtccgtgtgtccgtgtccgtgtcgtgtccgatgtgtgtatccgtgcttcat 21864758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 77
Target Start/End: Original strand, 32093954 - 32093989
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtc 77  Q
    |||||||||||||||||||||| |||||||||||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtc 32093989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 45056927 - 45056974
Alignment:
Q  112 aattatgtgatattttaaaattattagcagtgttggagtgtcggtgtc 159  Q
    ||||||||||| || | ||||||||||||||||||||||||| |||||    
T  45056927 aattatgtgattttctcaaattattagcagtgttggagtgtccgtgtc 45056974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 598327 - 598277
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||| ||| ||||||||||||| | ||||||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacg 598277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 3721139 - 3721070
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgt 169  Q
    |||||||| ||||||||||||||| || | |||||||||||| ||| | | |||| |||||||||||||||    
T  3721139 tataattatactaaattatgtgattttctcaaattattagca-tgtcgaaatgtcagtgtccgtgtcgtgt 3721070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 7133212 - 7133262
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| || |||||| ||||||| ||||| ||||||||||||||    
T  7133212 ctatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacg 7133262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 9778624 - 9778574
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||  ||||||||||||| | ||||||||||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacg 9778574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 11738151 - 11738193
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgt 84  Q
    ||||||| |||| ||||||||| ||||||||||||||||||||    
T  11738151 ctatgaaacacggacactcctctgattaggcgtgtctcagtgt 11738193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 15680928 - 15680878
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| |||||||||  ||||| |||||||| ||||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacg 15680878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 17852119 - 17852069
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| |||||||||  |||||| ||||||| ||||||||||||    
T  17852119 ctatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacg 17852069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 38143318 - 38143231
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattatta 137  Q
    ||||||| |||||||||||||| ||||||| ||||||        ||||| ||||  |||||||||| ||||||||||||| |||| |||||||||    
T  38143318 ctatgaaacacgaacactcctcggattaggtgtgtct--------gacaccaacacatataattacattaaattatgtgattttttcaaattatta 38143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 43027404 - 43027454
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| |||||| || ||||||||||||| | ||||||||||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacg 43027454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 6490835 - 6490786
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    |||||||||||| ||||||||| ||||| ||||||| | |||||||||||    
T  6490835 ctatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 24105797 - 24105748
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    ||||||||||| |||||||||| | ||||||||||| | |||||||||||    
T  24105797 ctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacac 24105748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 26733348 - 26733279
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtc 170  Q
    |||||| ||| ||||||||||| || | ||||||||||| |||| |  ||||| ||||||||||||||||    
T  26733348 taattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 27093426 - 27093471
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgt 144  Q
    |||||||||||||||||||||||| || | ||||||||||| ||||    
T  27093426 tataattacactaaattatgtgattttcttaaattattagcggtgt 27093471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 27184875 - 27184830
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgt 144  Q
    |||||||||||||||||||||||| || | ||||||||||| ||||    
T  27184875 tataattacactaaattatgtgattttcttaaattattagcggtgt 27184830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 2334379 - 2334331
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    ||||||| |||| ||||||||| |||||| ||||| |||||||||||||    
T  2334379 ctatgaaacacggacactcctcggattagacgtgtttcagtgtcggaca 2334331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 7328638 - 7328674
Alignment:
Q  41 tctatgaagcacgaacactcctccgattaggcgtgtc 77  Q
    |||||||||||||||||||| || |||||||||||||    
T  7328638 tctatgaagcacgaacactcatcggattaggcgtgtc 7328674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 9408349 - 9408385
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattatta 137  Q
    |||||||||||||||||||||| |||| |||||||||    
T  9408349 taattacactaaattatgtgattttttcaaattatta 9408385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 15902868 - 15902796
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||||||||||||||||| || | |||||||||   |||| ||  |||| ||||| |||||||||||    
T  15902868 tataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtcc 15902796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 19213844 - 19213804
Alignment:
Q  104 ttacactaaattatgtgatattttaaaattattagcagtgt 144  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  19213844 ttacactgcattatgtgattttttaaaattattagcagtgt 19213804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 24339774 - 24339726
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcgga 88  Q
    ||||||||||||||  |||||||| ||||||||||||| | ||||||||    
T  24339774 atctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcgga 24339726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 32094028 - 32094124
Alignment:
Q  94 acatttataattacactaaattatgtga-tattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgct 189  Q
    |||||| |||||||||| |||||||||| | |||| ||||||||||  |||||||  |||  ||||  ||||||||||  || ||||||||||||||    
T  32094028 acatttgtaattacactgaattatgtgatttttttcaaattattagttgtgttggcatgttagtgtttgtgtcgtgtcttgtgtccgtatccgtgct 32094124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 32287404 - 32287452
Alignment:
Q  43 tatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    ||||||||||| ||||||||| ||||||| ||||| | |||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 32287452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 33994331 - 33994283
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    ||||||| |||||||||||||  ||||||||||||||| |||| |||||    
T  33994331 ctatgaaacacgaacactccttggattaggcgtgtctcggtgttggaca 33994283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 22440559 - 22440684
Alignment:
Q  44 atgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtg 143  Q
    |||||||||| ||||||||| |||||||||||||  |||||||||||||  ||  |||||||||||| ||||||||||| || | ||||||||| | |||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacacg-tcacatataattacactgaattatgtgattttctcaaattattaacggtg 22440657  T
Q  144 ttggagtgtcggtgtccgtgtcgtgtc 170  Q
    | |  || || |||||| |||||||||    
T  22440658 tcgatgtatcagtgtccatgtcgtgtc 22440684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 29205589 - 29205539
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  29205589 atctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggaca 29205539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 34306743 - 34306794
Alignment:
Q  41 tctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  34306743 tctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacg 34306794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 36635381 - 36635298
Alignment:
Q  88 acacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    |||||||||  |||||||||||| ||||||||||| || | ||||||||||  ||||||| ||||| ||||||| |||||||||    
T  36635381 acacgaacacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtcc 36635298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 37203373 - 37203265
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacga----acatttataattacactaaattatgtgatattttaaaattat 135  Q
    |||||||||||||| ||||| ||| |||||| |||||| | ||||||||| |||    ||| || ||||||||||||||||||| || |||| |||||||    
T  37203373 atctatgaagcacggacacttctcggattagacgtgtcccggtgtcggacccgacactacacttgtaattacactaaattatgtcattttttcaaattat 37203274  T
Q  136 tagcagtgt 144  Q
    |||| ||||    
T  37203273 tagccgtgt 37203265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 19482798 - 19482748
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacg 19482748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 15029811 - 15029766
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgt 144  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||    
T  15029811 tataattacactgaattatgtgatattttcaaattattagcagtgt 15029766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 23293001 - 23293086
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    |||||| ||| ||||||||||| |||| ||||||||||| |||| || |||||  |||||||||||||||| || ||||| |||||    
T  23293001 taattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgt 23293086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 35157980 - 35158085
Alignment:
Q  81 gtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    ||||| |||||  ||| ||||||||||||||||||||||||| |||  ||||||||||  | || || ||||| |||||||||| |||||| || |||||    
T  35157980 gtgtcagacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgt 35158079  T
Q  181 atccgt 186  Q
     |||||    
T  35158080 gtccgt 35158085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 3064868 - 3064916
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||||||||    
T  3064868 ctatgaagcacggacactcctcggattaggcgtgtctcagagtcggaca 3064916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 16184950 - 16184902
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||||||    
T  16184950 ctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcggaca 16184902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 31800493 - 31800585
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||| |||||||| | || |||||||||||||||| |||| || |||||||||| |||||| |||||| | ||  |||||||| |||||    
T  31800493 taattacattaaattatttaattttttaaaattattagctgtgtcggtgtgtcggtgttcgtgtcatgtccaatgtctatatccgtgtttcat 31800585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 19482726 - 19482643
Alignment:
Q  87 gacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtc 170  Q
    ||||| |||| || |||||||||  |||||||||||||||| ||||||||||  |||| || ||||| ||||| ||||||||||    
T  19482726 gacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtc 19482643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 28084640 - 28084593
Alignment:
Q  45 tgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacg 28084593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 715543 - 715593
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||||| ||||||||| ||||||||||||| | ||||||||||    
T  715543 atctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 715593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 752869 - 752919
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||||| ||||||||| ||||||||||||| | ||||||||||    
T  752869 atctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 752919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 10499225 - 10499306
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgat 122  Q
    |||||||||||||| ||| ||||| |||||||||||| || | ||| |||||  |||  ||||||||||||||||||||||||    
T  10499225 atctatgaagcacggacaatcctcggattaggcgtgtgtc-gggtccgacactgacacatataattacactaaattatgtgat 10499306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 23292926 - 23292976
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||| ||||||||||||| | ||||||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacg 23292976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 12895269 - 12895374
Alignment:
Q  81 gtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    ||||| |||||  ||| |||||||||||| |||||||||||| |||| |||||||||   |||| || |||||  ||| |||||||| ||| || |||||    
T  12895269 gtgtccgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtcgtatccggtgtccgt 12895368  T
Q  181 atccgt 186  Q
    ||||||    
T  12895369 atccgt 12895374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 24343553 - 24343472
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgt 180  Q
    |||||||||||| |||||||| || || | ||||||||| | |||| || ||||||| ||||||||||||||| || |||||    
T  24343553 tataattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgt 24343472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 191
Target Start/End: Original strand, 11651155 - 11651239
Alignment:
Q  107 cactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttc 191  Q
    |||| ||||||||||| |||| ||||||||||| |||| |  ||||| |||||||| |||||||   | ||||||||||||||||    
T  11651155 cactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtcttatgtccgtatccgtgcttc 11651239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 16073513 - 16073465
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||| | ||||||||| |||||||||||||| |||||||||||    
T  16073513 ctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggaca 16073465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 24343634 - 24343582
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||||| ||||||||| || |||||||||| | ||||||||||||    
T  24343634 atctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacg 24343582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 8423713 - 8423776
Alignment:
Q  81 gtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcagtgt 144  Q
    ||||| |||||  ||||||||||||||||| ||||||||||| || | ||||||||||| ||||    
T  8423713 gtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgt 8423776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 77
Target Start/End: Original strand, 12895214 - 12895249
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtc 77  Q
    |||||||||||||||||||||| |||||||||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtc 12895249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 2361912 - 2361966
Alignment:
Q  39 catctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacga 93  Q
    ||||||||||||||| |||||| || ||||||| ||||||| ||||| |||||||    
T  2361912 catctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacga 2361966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 14126123 - 14126197
Alignment:
Q  98 ttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcca 172  Q
    ||||||||||||| ||||||||||  || | ||||||||| |||||| || ||||  ||||| ||||||||||||    
T  14126123 ttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgtcca 14126197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 28964188 - 28964234
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcgga 88  Q
    |||||||||| | ||||||||| ||||||||||||| ||||||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcgga 28964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 29205488 - 29205442
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttgg 147  Q
    |||||||||| ||||||||||| |||| ||||||||||| |||||||    
T  29205488 taattacactgaattatgtgattttttcaaattattagccgtgttgg 29205442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 13134496 - 13134451
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgt 144  Q
    |||||||||||||||||||||||| || | ||||||| ||||||||    
T  13134496 tataattacactaaattatgtgattttcttaaattataagcagtgt 13134451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 14465006 - 14465055
Alignment:
Q  43 tatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    ||||||||||| ||||||||| |||||| |||||| |||||||| |||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacg 14465055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 18513175 - 18513224
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    |||||||||||| ||||||||| |||||||||||||   |||||||||||    
T  18513175 ctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacac 18513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 20633590 - 20633541
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    |||||||||||||||||||||  ||||||||||||||  ||||| |||||    
T  20633590 ctatgaagcacgaacactccttggattaggcgtgtcttggtgtccgacac 20633541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 27706192 - 27706261
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtc 170  Q
    |||||||||||||||||||||| |||| |||||||||   |||| |  ||||| |||||| |||||||||    
T  27706192 taattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtc 27706261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 44081508 - 44081557
Alignment:
Q  43 tatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||||||||| || |||||| | ||||||||||||| |||||    
T  44081508 tatgaagcacgaacactcttcagattagacatgtctcagtgtcgaacacg 44081557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 54580018 - 54580075
Alignment:
Q  81 gtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattag 138  Q
    ||||| |||||  ||| ||||||||||||| ||||||||||| |||| ||||||||||    
T  54580018 gtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 2361990 - 2362042
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtc 153  Q
    ||||||||||||||||||| || |||| ||||||||||| |||| || |||||    
T  2361990 taattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtc 2362042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 3947781 - 3947872
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    |||||||||| ||||||| ||| |||| ||||||||||| |||| ||  |||| ||||| |||| |||||| || |||||||| | |||||||    
T  3947781 taattacactgaattatgcgattttttcaaattattagctgtgtcggcatgtccgtgtctgtgtggtgtcc-gtgtccgtatctgagcttcat 3947872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 5414185 - 5414257
Alignment:
Q  99 tataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    ||||||||||||  ||| |||||| || |||||  |||||| |||| || ||||| |||||||||||||||||    
T  5414185 tataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtcgtgtcc 5414257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 6485626 - 6485662
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattatta 137  Q
    |||||||||||||||||||||| |||| |||||||||    
T  6485626 taattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 8423658 - 8423706
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||| ||||| ||||| ||||||||||||||||| | ||||||||||    
T  8423658 ctatgacgcacggacacttctccgattaggcgtgtcccggtgtcggaca 8423706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 11596297 - 11596345
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||| ||||||||| ||||||||||||| |  |||||||||    
T  11596297 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca 11596345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 14465090 - 14465154
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    |||||||| | ||||||||||| |||| ||||||||||  ||||| ||||||| ||||| |||||    
T  14465090 taattacattgaattatgtgattttttcaaattattaggtgtgttagagtgtcagtgtctgtgtc 14465154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 40965389 - 40965341
Alignment:
Q  43 tatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    ||||||||||  ||||||||| ||||||||||||||  |||||||||||    
T  40965389 tatgaagcaccgacactcctcagattaggcgtgtcttggtgtcggacac 40965341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 8842 - 8757
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    |||||||||||||| || |||| |||| ||||||||||| |||| || ||||| ||||||||||||||||| || ||||| |||||    
T  8842 taattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgt 8757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 8919 - 8867
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||||| | ||||||| ||||||||||||||| ||||||||||||    
T  8919 atctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacg 8867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 46776 - 46656
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacgaacatttataattacactaaattatgtgatattttaaaattattagcag 141  Q
    |||||||||||| ||||||||| |||||||||||||         |||||  |||||| |||||||||| ||||||||||| |||| ||||||||| | |    
T  46776 ctatgaagcacggacactcctcggattaggcgtgtc---------gacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactg 46686  T
Q  142 tgttggagtgtcggtgtccgtgtcgtgtcc 171  Q
    ||| || |||||  ||||||||||||||||    
T  46685 tgtcggcgtgtcattgtccgtgtcgtgtcc 46656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 90894 - 90806
Alignment:
Q  94 acatttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtat 182  Q
    |||| |||||||||||| |||||| |||| || | |||||||||   ||||||| ||||| ||||| ||||||||||||||||||||||    
T  90894 acatatataattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtcgtgtccagtatccgtat 90806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 186
Target Start/End: Original strand, 263384 - 263472
Alignment:
Q  98 ttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    ||||||||||||| ||||||||| | || | ||||||||||||||||||   |||| ||||||||||||| |||||| ||||| |||||    
T  263384 ttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgtatccagtgtccgtgtccgt 263472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 14647 - 14596
Alignment:
Q  41 tctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  14647 tctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacg 14596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 23467 - 23373
Alignment:
Q  98 ttataattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||||| ||||||||||| ||||  | |||||| | |||| || ||||| ||||| ||||||||||| || ||||||||||||||||||    
T  23467 ttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtcc-gtgtccgtatccgtgcttcat 23373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 13444 - 13352
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||| |||| ||||||||||| || | ||||||||||  |||| || ||||| ||||||||||| | ||| || ||||||||||||||||||    
T  13444 taattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcat 13352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 21883 - 21975
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||| |||| ||||||||||| || | ||||||||||  |||| || ||||| ||||||||||| | ||| || ||||||||||||||||||    
T  21883 taattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcat 21975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 51855 - 51791
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtc 165  Q
    |||||||||| ||||||||||| |||| ||||||||||| |||| || ||||| |||||||||||    
T  51855 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 51791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 178833 - 178925
Alignment:
Q  101 taattacactaaattatg-tgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttca 192  Q
    |||||||||| ||||||| |||| |||| ||||||||||  |||| || ||||| ||||||||||||||||| || ||  |||||||||||||    
T  178833 taattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcaatatccgtgcttca 178925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 4819 - 4869
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||||| ||||||||| ||||||||||||| | ||||||||||    
T  4819 atctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 4869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 477 - 562
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    |||||||||| |||| |||||| |||| |||||||||||||||| || || || ||||||||| ||||| | || ||||| |||||    
T  477 taattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgtgtccgt 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 403 - 452
Alignment:
Q  43 tatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    ||||||||||| ||||||||| ||||||| ||||| | ||||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacg 452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 8562 - 8614
Alignment:
Q  40 atctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||||| |||||||||  |||||||||||  ||||||||||||||    
T  8562 atctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacg 8614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 17913 - 17977
Alignment:
Q  129 aaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgtgcttcat 193  Q
    ||||||||||| |||| || |||| |||||  || ||||||||||| ||||||||||||||||||    
T  17913 aaattattagcggtgtaggcgtgttggtgtttgtatcgtgtccagtgtccgtatccgtgcttcat 17977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 3427 - 3384
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtc 85  Q
    |||||||||||| ||||||||| ||||||||||||| |||||||    
T  3427 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtc 3384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 4976 - 5026
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||  ||||||||| |||||||| ||||||| |||||||||||    
T  4976 ctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacg 5026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 8720 - 8670
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacacg 92  Q
    |||||||||||| ||||||||  |||||||||| || ||||||||||||||    
T  8720 ctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacg 8670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 7318 - 7363
Alignment:
Q  93 aacatttataattacactaaattatgtgatattttaaaattattag 138  Q
    |||| ||||||||||||||||||||||||| |||  ||||||||||    
T  7318 aacacttataattacactaaattatgtgatttttccaaattattag 7363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 24155 - 24107
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggacac 91  Q
    |||||||||||| |||||| || ||||||||||||| |||||||||||||    
T  24155 ctatgaagcacggacactcatcggattaggcgtgtc-cagtgtcggacac 24107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 130526 - 130441
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattagcagtgttggagtgtcggtgtccgtgtcgtgtccagtatccgtatccgt 186  Q
    |||||||||| ||||||||||| |||| ||| ||||| | |||| ||  ||||  |||||||||||||||| || ||||| |||||    
T  130526 taattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgt 130441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 2978 - 3026
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||||| ||||||| |  ||||||||||| |||||||||||||    
T  2978 ctatgaagcacggacactccccatattaggcgtgtttcagtgtcggaca 3026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 17764 - 17801
Alignment:
Q  101 taattacactaaattatgtgatattttaaaattattag 138  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  17764 taattacactaaattatgtgattttttcaaattattag 17801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 3778 - 3826
Alignment:
Q  42 ctatgaagcacgaacactcctccgattaggcgtgtctcagtgtcggaca 90  Q
    |||||||||| | ||||||||| |||||||||||||||  |||||||||    
T  3778 ctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggaca 3826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University