View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10429_low_18 (Length: 239)
Name: NF10429_low_18
Description: NF10429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10429_low_18 |
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Alignment Details
Target: chr5 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 37308300 - 37308523
Alignment:
| Q |
1 |
agggaagtcaacgaagtacatatgcattgacttggattataattaaaaatggaaattatggtgtttgttgtagttatggagtggcacaatgcgaaatggt |
100 |
Q |
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| T |
37308300 |
agggaagtcaacgaagcacatatgcattgacttggattataatttaaaatggaaattatggtgtttgttgtagttatggagtggcacaatgcgaaatggt |
37308399 |
T |
|
| Q |
101 |
ttcacagctgccgacaggattggcgttgcaaggtgtattaagcaatttctaacatcaaaataaatatacaattttttctagaaaaataaacttttgtgct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37308400 |
ttcacagctgccgacaggattggcgttgcaaggtgtattaagcaatttctaacatcaaaataaatatacaattttttctagaaaaataaacttttgtgct |
37308499 |
T |
|
| Q |
201 |
atcattagcaataacgtgtataat |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
37308500 |
atcattagcaataacgtgtataat |
37308523 |
T |
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