View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10431_high_1 (Length: 426)
Name: NF10431_high_1
Description: NF10431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10431_high_1 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 374; Significance: 0; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 11 - 412
Target Start/End: Original strand, 9835498 - 9835899
Alignment:
| Q |
11 |
caaagggcaacatactgcatacacgtctctattccaaatgatggcggaaatttatttctggtttaattacttacgaggcatgaacacctgaaattagaga |
110 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9835498 |
caaagtgcaacatactgcatacacgtctctattccaaatgatggcggaaatttatttctggtttaattactcgcgaggcatgaacacctgaaattagaga |
9835597 |
T |
 |
| Q |
111 |
agtagctcattactttgtatatttcagttcaggaaatttgaaatttataggaagataaatgaaaagataaatgtaaaaccttagtttgtctcaccttcaa |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9835598 |
agtagctcattactttgtatatttcagttcaggaaatttgaaatttataggaggataaatgaaaagataaatgtaaaaccttagtttgtctcaccttcaa |
9835697 |
T |
 |
| Q |
211 |
gaaagattgttcggattaaatttagctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaac |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9835698 |
gaaagattgttcggattaaatttagctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagtccaatccttaaaac |
9835797 |
T |
 |
| Q |
311 |
tgaaactaagcaattctttacagctggaataagattctcactatttccatcttctattgctgcttcttcatctcttggtataagatgttggtccaaaatc |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
9835798 |
tgaaactaagcaattctttacagctggaataagattctcactatttccatcttctattgctgcttcttcatctcttggtacaaaatgttggtccaaaatc |
9835897 |
T |
 |
| Q |
411 |
tg |
412 |
Q |
| |
|
|| |
|
|
| T |
9835898 |
tg |
9835899 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 11 - 412
Target Start/End: Original strand, 9827129 - 9827530
Alignment:
| Q |
11 |
caaagggcaacatactgcatacacgtctctattccaaatgatggcggaaatttatttctggtttaattacttacgaggcatgaacacctgaaattagaga |
110 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9827129 |
caaagtgcaacatactgcatacacgtctctattccaaatgatggcggaaatttatttctggtttaattactcgcgaggcatgaacacctgaaattagaga |
9827228 |
T |
 |
| Q |
111 |
agtagctcattactttgtatatttcagttcaggaaatttgaaatttataggaagataaatgaaaagataaatgtaaaaccttagtttgtctcaccttcaa |
210 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9827229 |
agtagcccattactttgtatatttcagttcaggaaatttgaaatttataggaagataaatgaaaagataaatgtaaaaccttagtttgtctcaccttcaa |
9827328 |
T |
 |
| Q |
211 |
gaaagattgttcggattaaatttagctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaac |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9827329 |
gaaagattgttcggattaaatttagctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagtccaatccttaaaac |
9827428 |
T |
 |
| Q |
311 |
tgaaactaagcaattctttacagctggaataagattctcactatttccatcttctattgctgcttcttcatctcttggtataagatgttggtccaaaatc |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||| |
|
|
| T |
9827429 |
tgaaactaagcaattctttacagctggaataagattctcactatttccatcttctattgctgcttcttcatctcttggtacaaaatgttggttcaaaatc |
9827528 |
T |
 |
| Q |
411 |
tg |
412 |
Q |
| |
|
|| |
|
|
| T |
9827529 |
tg |
9827530 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 191 - 369
Target Start/End: Original strand, 10587827 - 10588005
Alignment:
| Q |
191 |
ttagtttgtctcaccttcaagaaagattgttcggattaaatttagctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacag |
290 |
Q |
| |
|
|||||||||||| || |||| ||||| |||| ||||| |||||||||||| |||||||||| |||| |||||||||||||||||||||| ||||||| |
|
|
| T |
10587827 |
ttagtttgtctcgccatcaacaaagaccgttctgattatatttagctctcttgtaacatctattatgctcattctttcttttggtgattccattgaacaa |
10587926 |
T |
 |
| Q |
291 |
gcaagaccaatccttaaaactgaaactaagcaattctttacagctggaataagattctcactatttccatcttctattg |
369 |
Q |
| |
|
||||| |||||||||| || |||||||||||| |||| ||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
10587927 |
gcaagtccaatccttagaagtgaaactaagcacttctccttagctggaataagattctcattatgtccatcttctattg |
10588005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 237 - 411
Target Start/End: Complemental strand, 10612524 - 10612350
Alignment:
| Q |
237 |
tctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaactgaaactaagcaattctttacagctg |
336 |
Q |
| |
|
|||||||||||||| || || |||||||||||||| |||||||| ||||||| ||| |||||||| |||| |||||||||||| | ||||| | || |
|
|
| T |
10612524 |
tctctagtaacatccacaatattcattctttctttgggtgattccattgaacaaagaagtccaatcctaaaaagtgaaactaagcactcctttaaacttg |
10612425 |
T |
 |
| Q |
337 |
gaataagattctcactatttccatcttctattgctgcttcttcatctcttggtataagatgttggtccaaaatct |
411 |
Q |
| |
|
|||||||||||||||| |||||||||| |||| || ||||| ||| | ||| | ||||||| ||||||| |||| |
|
|
| T |
10612424 |
gaataagattctcactctttccatcttgtatttctacttctgcatattttgacacaagatgtgggtccaagatct |
10612350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 10651613 - 10651773
Alignment:
| Q |
252 |
actatgttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaactgaaactaagcaattctttacagctggaataagattctcac |
351 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| ||||| |||||||| |||| ||||||||| || |||| ||||| |||| | | ||| ||| |
|
|
| T |
10651613 |
actatgttcattctttcttttggtgatttcactgaacaagcaagtccaatcctgaaaagtgaaactaaacacttctctacagttggagtgaaatttccac |
10651712 |
T |
 |
| Q |
352 |
tatttccatcttctattgctgcttcttcatctcttggtataagatgttggtccaaaatctg |
412 |
Q |
| |
|
||||| ||||||||| || ||||||||| |||||||| ||||||| | ||||||||||| |
|
|
| T |
10651713 |
agtttccttcttctatttcttcttcttcatttcttggtacaagatgtggatccaaaatctg |
10651773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 246 - 409
Target Start/End: Complemental strand, 7193811 - 7193648
Alignment:
| Q |
246 |
acatctactatgttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaactgaaactaagcaattctttacagctggaataagat |
345 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||| |||||| ||||| |||||||| |||| |||||||| ||| |||| |||| |||| | | || |
|
|
| T |
7193811 |
acatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatttggagtgaaat |
7193712 |
T |
 |
| Q |
346 |
tctcactatttccatcttctattgctgcttcttcatctcttggtataagatgttggtccaaaat |
409 |
Q |
| |
|
| |||| |||||||||||||||| ||||||| || |||||||| ||||| | |||||||||| |
|
|
| T |
7193711 |
ttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaat |
7193648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 258 - 409
Target Start/End: Complemental strand, 10581788 - 10581637
Alignment:
| Q |
258 |
ttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaactgaaactaagcaattctttacagctggaataagattctcactatttc |
357 |
Q |
| |
|
|||| ||||||||||||||| || ||||||| ||| |||||||| |||| |||||||||||| | |||| |||||||||||||||||||| ||||| |
|
|
| T |
10581788 |
ttcagtctttcttttggtgactccattgaacacataagtccaatcctaaaaagtgaaactaagcactcctttgcagctggaataagattctcaagatttc |
10581689 |
T |
 |
| Q |
358 |
catcttctattgctgcttcttcatctcttggtataagatgttggtccaaaat |
409 |
Q |
| |
|
||||||| ||| || ||||| | || |||| || ||||||| |||||||||| |
|
|
| T |
10581688 |
catcttccatttctacttctgcgtcccttgataaaagatgtgggtccaaaat |
10581637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 255 - 411
Target Start/End: Complemental strand, 10565799 - 10565643
Alignment:
| Q |
255 |
atgttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaactgaaactaagcaattctttacagctggaataagattctcactat |
354 |
Q |
| |
|
||||| ||||||||||||||||| || ||||||| ||| |||||||| |||| |||||||||||| | |||| ||| |||||||||||||||| || |
|
|
| T |
10565799 |
atgttgattctttcttttggtgactccattgaacacataagtccaatcctaaaaagtgaaactaagcactcctttgcaggtggaataagattctcatgat |
10565700 |
T |
 |
| Q |
355 |
ttccatcttctattgctgcttcttcatctcttggtataagatgttggtccaaaatct |
411 |
Q |
| |
|
||||||||| ||| | ||||| |||| ||| || ||||||| |||||||||||| |
|
|
| T |
10565699 |
ttccatctttcatttcaacttctgcatccattgataaaagatgtgggtccaaaatct |
10565643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 236 - 412
Target Start/End: Original strand, 10659480 - 10659656
Alignment:
| Q |
236 |
ctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaactgaaactaagcaattctttacagct |
335 |
Q |
| |
|
|||||| || ||||| ||||| |||||||||||||||||||||| |||||| ||||| ||||||| |||| |||||||||||| |||| ||| | |
|
|
| T |
10659480 |
ctctctggtgacatcaactatattcattctttcttttggtgatttcactgaacatgcaagtccaatccgaaaaagtgaaactaagcacttctctacgatt |
10659579 |
T |
 |
| Q |
336 |
ggaataagattctcactatttccatcttctattgctgcttcttcatctcttggtataagatgttggtccaaaatctg |
412 |
Q |
| |
|
||| | ||| |||| ||||| ||||||||| |||||||||| |||||||| ||||||| ||||||||||||| |
|
|
| T |
10659580 |
ggagggaaatttccactctttccttcttctattttggcttcttcatttcttggtacaagatgtgggtccaaaatctg |
10659656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 234 - 366
Target Start/End: Original strand, 10746424 - 10746556
Alignment:
| Q |
234 |
agctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaactgaaactaagcaattctttacag |
333 |
Q |
| |
|
||||||||||| ||||| || | ||||||||||||||||||||||| ||| ||| ||| |||||||| |||| ||||||||| || | ||||||| |
|
|
| T |
10746424 |
agctctctagtgacatccacagtattcattctttcttttggtgattcaattgtacaaataagtccaatcctaaaaagtgaaactaaacactcttttacag |
10746523 |
T |
 |
| Q |
334 |
ctggaataagattctcactatttccatcttcta |
366 |
Q |
| |
|
|||||||||||||||| | ||||||||||||| |
|
|
| T |
10746524 |
ttggaataagattctcattgtttccatcttcta |
10746556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 234 - 411
Target Start/End: Complemental strand, 10605569 - 10605392
Alignment:
| Q |
234 |
agctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaactgaaactaagcaattctttacag |
333 |
Q |
| |
|
|||||| |||||||||| | || |||||||||||||| |||||||| ||||||| ||| ||||| || |||| |||||||||| | | || ||| |
|
|
| T |
10605569 |
agctctttagtaacatccataatattcattctttctttcggtgattccattgaacaaataagtccaattctaaaaagtgaaactaaggattcctctaccc |
10605470 |
T |
 |
| Q |
334 |
ctggaataagattctcactatttccatcttctattgctgcttcttcatctcttggtataagatgttggtccaaaatct |
411 |
Q |
| |
|
||||||||||||| | ||||||| |||||||||| ||||| ||||||||| || ||| ||| |||||||||||| |
|
|
| T |
10605469 |
ttggaataagattcgtatggtttccattttctattgctacttctacatctcttgttacaaggtgtgggtccaaaatct |
10605392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 322
Target Start/End: Original strand, 19605256 - 19605347
Alignment:
| Q |
231 |
tttagctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaactgaaactaagca |
322 |
Q |
| |
|
|||||||||||||| ||||| |||| |||||||||||||| || ||||| | ||||||||||| |||||||| |||| ||||| ||||| |
|
|
| T |
19605256 |
tttagctctctagtggcatcttctatattcattctttctttgggagattccatcgaacaggcaagtccaatcctaaaaatggaaacaaagca |
19605347 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 359 - 412
Target Start/End: Complemental strand, 10559590 - 10559537
Alignment:
| Q |
359 |
atcttctattgctgcttcttcatctcttggtataagatgttggtccaaaatctg |
412 |
Q |
| |
|
|||||||||||||||||| || |||||||||| || |||| ||||||||||||| |
|
|
| T |
10559590 |
atcttctattgctgcttcctcttctcttggtacaatatgtgggtccaaaatctg |
10559537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 365
Target Start/End: Original strand, 10716381 - 10716512
Alignment:
| Q |
234 |
agctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaactgaaactaagcaattctttacag |
333 |
Q |
| |
|
||||||||||| ||||| | || |||||||||||| | |||||||| ||| ||| |||| |||||||| |||| ||||||||||| | ||||| | |
|
|
| T |
10716381 |
agctctctagtgacatccataatattcattctttctatcggtgattccattgtacaaacaagtccaatcctgaaaagagaaactaagcattcatttaccg |
10716480 |
T |
 |
| Q |
334 |
ctggaataagattctcactatttccatcttct |
365 |
Q |
| |
|
| |||||||||||||| | ||||||||||| |
|
|
| T |
10716481 |
caggaataagattctctatgcttccatcttct |
10716512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 10760808 - 10760895
Alignment:
| Q |
311 |
tgaaactaagcaattctttacagctggaataagattctcactatttccatcttctattgctgcttcttcatctcttggtataagatgt |
398 |
Q |
| |
|
|||||||||||| |||| |||| ||||||||||||| || | |||||||||| |||| || ||| | ||||||||| || ||||||| |
|
|
| T |
10760808 |
tgaaactaagcacttctctacacttggaataagattcccattgtttccatcttgtatttctacttttacatctcttgatacaagatgt |
10760895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 234 - 411
Target Start/End: Complemental strand, 12958874 - 12958697
Alignment:
| Q |
234 |
agctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaactgaaactaagcaattctttacag |
333 |
Q |
| |
|
||||||||||| ||||| || || ||||||||||||||||||||||| |||||| ||| |||||||| |||| |||||||||||| | || ||||| |
|
|
| T |
12958874 |
agctctctagtgacatcgacaatattcattctttcttttggtgattccaatgaacataaaagtccaatcctaaaaagtgaaactaagcactcctctacag |
12958775 |
T |
 |
| Q |
334 |
ctggaataagattctcactatttccatcttctattgctgcttcttcatctcttggtataagatgttggtccaaaatct |
411 |
Q |
| |
|
|||||||||| ||||| ||||||||||||| ||||| | |||||| ||||||||| ||||||| | ||||| |||| |
|
|
| T |
12958774 |
ttggaataagaatctcatgatttccatcttctcttgctccatcttcagctcttggtaaaagatgtggatccaacatct |
12958697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 234 - 411
Target Start/End: Complemental strand, 12907986 - 12907809
Alignment:
| Q |
234 |
agctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaactgaaactaagcaattctttacag |
333 |
Q |
| |
|
||||||||| | |||||||| || |||||||||||||||| |||||| |||||| ||| |||||||| |||| |||| |||||| | || |||| |
|
|
| T |
12907986 |
agctctctattgacatctacaatattcattctttcttttgttgattccaatgaacataaaagtccaatcctaaaaagtgaagttaagcactcctctacat |
12907887 |
T |
 |
| Q |
334 |
ctggaataagattctcactatttccatcttctattgctgcttcttcatctcttggtataagatgttggtccaaaatct |
411 |
Q |
| |
|
|||||||||| ||||| | |||||||||||||| || |||||||| ||||||||| ||||||| | |||||||||| |
|
|
| T |
12907886 |
ttggaataagaatctcatgaattccatcttctattcctccttcttcagctcttggtaaaagatgtggatccaaaatct |
12907809 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 234 - 411
Target Start/End: Complemental strand, 12933075 - 12932898
Alignment:
| Q |
234 |
agctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaactgaaactaagcaattctttacag |
333 |
Q |
| |
|
||||||||||| ||||| || || ||||||||||||||||||||||| ||||| ||| ||||||| | || |||||| ||||||| | || || |
|
|
| T |
12933075 |
agctctctagtgacatccacaatattcattctttcttttggtgattccaaagaacataaaagtgcaatcctaagaagtgaaacaaagcaatcttctatag |
12932976 |
T |
 |
| Q |
334 |
ctggaataagattctcactatttccatcttctattgctgcttcttcatctcttggtataagatgttggtccaaaatct |
411 |
Q |
| |
|
||||||| || ||||| ||||||||||||||||||| |||||||| ||||||||| ||||||| | |||||||||| |
|
|
| T |
12932975 |
ttggaatatgaatctcatgatttccatcttctattgctccttcttcagctcttggtaaaagatgtggatccaaaatct |
12932898 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 411
Target Start/End: Complemental strand, 12900369 - 12900189
Alignment:
| Q |
234 |
agctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaactgaaactaagcaattctttacag |
333 |
Q |
| |
|
||||||||||| ||||| || || ||||||||||||||||||||||| ||||| ||| ||||||| | || |||||||||||| | | || || |
|
|
| T |
12900369 |
agctctctagtgacatccacaatattcattctttcttttggtgattccaaagaacataaaagtgcaatcctaagaagtgaaactaagcactcttctatag |
12900270 |
T |
 |
| Q |
334 |
ctggaataagattctcactatttccatcttctattgctgc---ttcttcatctcttggtataagatgttggtccaaaatct |
411 |
Q |
| |
|
||||||| || ||||| ||||||||||||||||||| | ||||||| ||||||||| ||||||| | |||||||||| |
|
|
| T |
12900269 |
ttggaatatgaatctcatgatttccatcttctattgctcctaattcttcagctcttggtaaaagatgtggatccaaaatct |
12900189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 234 - 411
Target Start/End: Original strand, 17922810 - 17922987
Alignment:
| Q |
234 |
agctctctagtaacatctactatgttcattctttcttttggtgattctcttgaacaggcaagaccaatccttaaaactgaaactaagcaattctttacag |
333 |
Q |
| |
|
||||||||||| ||||| || || ||||||||||||||||||||||| |||||| ||| |||||||| |||| ||||||||||| | || ||||| |
|
|
| T |
17922810 |
agctctctagtgacatccacaatattcattctttcttttggtgattccaatgaacaaaaaagtccaatcctaaaaagggaaactaagcactcctctacag |
17922909 |
T |
 |
| Q |
334 |
ctggaataagattctcactatttccatcttctattgctgcttcttcatctcttggtataagatgttggtccaaaatct |
411 |
Q |
| |
|
||||| |||| ||||| ||||||||||||| |||| | |||||| ||||||||| ||||||| | |||||||||| |
|
|
| T |
17922910 |
ttggaagaagaatctcatgatttccatcttctcgtgctccatcttcagctcttggtaaaagatgtggatccaaaatct |
17922987 |
T |
 |
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