View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10432_low_1 (Length: 513)

Name: NF10432_low_1
Description: NF10432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10432_low_1
NF10432_low_1
[»] chr2 (66 HSPs)
chr2 (18-497)||(1633350-1633829)
chr2 (337-415)||(41407170-41407248)
chr2 (359-417)||(15757811-15757869)
chr2 (359-412)||(12795664-12795717)
chr2 (87-209)||(20952376-20952506)
chr2 (350-415)||(39659644-39659709)
chr2 (86-209)||(42868399-42868515)
chr2 (86-161)||(2142731-2142806)
chr2 (359-410)||(10619350-10619401)
chr2 (359-413)||(43570297-43570351)
chr2 (87-159)||(30331830-30331902)
chr2 (361-413)||(38010283-38010335)
chr2 (350-413)||(2416194-2416257)
chr2 (364-415)||(4606860-4606911)
chr2 (360-411)||(26626759-26626810)
chr2 (90-161)||(31561664-31561735)
chr2 (359-414)||(36534668-36534723)
chr2 (87-161)||(2416390-2416464)
chr2 (86-132)||(18179055-18179101)
chr2 (368-418)||(41812228-41812278)
chr2 (350-411)||(16451021-16451082)
chr2 (337-415)||(41293354-41293434)
chr2 (325-418)||(42659262-42659355)
chr2 (326-406)||(3311922-3312002)
chr2 (359-407)||(5599195-5599243)
chr2 (86-207)||(10619138-10619267)
chr2 (161-209)||(20926524-20926572)
chr2 (87-135)||(20933829-20933877)
chr2 (161-209)||(26202049-26202097)
chr2 (161-209)||(40835549-40835597)
chr2 (364-415)||(41880642-41880694)
chr2 (89-161)||(42419870-42419942)
chr2 (87-130)||(449955-449998)
chr2 (364-415)||(5745560-5745611)
chr2 (379-418)||(15305522-15305561)
chr2 (86-161)||(27317456-27317531)
chr2 (364-411)||(41851408-41851455)
chr2 (386-416)||(2195848-2195878)
chr2 (379-413)||(14220963-14220997)
chr2 (379-413)||(40835435-40835469)
chr2 (379-417)||(43036507-43036545)
chr2 (388-418)||(43279703-43279733)
chr2 (165-203)||(45229538-45229576)
chr2 (103-132)||(5365514-5365543)
chr2 (382-415)||(7043880-7043913)
chr2 (360-413)||(9395011-9395064)
chr2 (350-415)||(19608751-19608816)
chr2 (324-417)||(23974600-23974693)
chr2 (180-209)||(24347743-24347772)
chr2 (161-210)||(32592606-32592655)
chr2 (177-206)||(33319829-33319858)
chr2 (350-415)||(40682499-40682564)
chr2 (359-415)||(41702320-41702377)
chr2 (110-209)||(43279469-43279578)
chr2 (178-206)||(7928317-7928345)
chr2 (89-141)||(9174912-9174964)
chr2 (367-415)||(12194821-12194869)
chr2 (161-209)||(12194973-12195021)
chr2 (177-209)||(12289818-12289850)
chr2 (166-206)||(12464479-12464519)
chr2 (86-126)||(15370241-15370281)
chr2 (178-206)||(16398138-16398166)
chr2 (178-206)||(26143658-26143686)
chr2 (359-411)||(27695732-27695784)
chr2 (379-415)||(28792365-28792401)
chr2 (373-413)||(40279082-40279122)
[»] chr7 (52 HSPs)
chr7 (324-414)||(21568738-21568828)
chr7 (360-418)||(27863843-27863901)
chr7 (352-413)||(33678663-33678724)
chr7 (350-418)||(38500054-38500122)
chr7 (360-413)||(47795838-47795891)
chr7 (359-418)||(33128623-33128682)
chr7 (380-418)||(9210494-9210532)
chr7 (359-413)||(18865195-18865249)
chr7 (337-414)||(3308375-3308452)
chr7 (379-418)||(30571088-30571127)
chr7 (360-418)||(40252242-40252300)
chr7 (350-415)||(23989620-23989685)
chr7 (89-150)||(45338541-45338602)
chr7 (173-209)||(420381-420417)
chr7 (359-415)||(39393710-39393766)
chr7 (359-415)||(46139821-46139877)
chr7 (359-415)||(46280404-46280460)
chr7 (379-418)||(119775-119814)
chr7 (86-161)||(4970710-4970785)
chr7 (324-411)||(4970898-4970985)
chr7 (379-418)||(5947027-5947066)
chr7 (86-161)||(25596109-25596184)
chr7 (161-208)||(28614455-28614502)
chr7 (350-421)||(33672951-33673022)
chr7 (86-161)||(36517654-36517729)
chr7 (383-418)||(40377997-40378032)
chr7 (363-418)||(45263959-45264014)
chr7 (87-161)||(20526523-20526597)
chr7 (343-413)||(20881755-20881825)
chr7 (384-414)||(28341234-28341264)
chr7 (86-132)||(44822064-44822110)
chr7 (324-418)||(46078013-46078107)
chr7 (349-418)||(19131159-19131228)
chr7 (379-416)||(19131238-19131275)
chr7 (350-411)||(20526646-20526707)
chr7 (89-126)||(39542221-39542258)
chr7 (176-209)||(45790441-45790474)
chr7 (86-143)||(47134676-47134733)
chr7 (359-407)||(17248434-17248482)
chr7 (86-158)||(18962501-18962573)
chr7 (359-407)||(20189153-20189201)
chr7 (87-127)||(24048651-24048691)
chr7 (86-126)||(24363518-24363558)
chr7 (383-415)||(28210324-28210356)
chr7 (86-126)||(28691754-28691794)
chr7 (350-410)||(33552947-33553007)
chr7 (161-209)||(34744049-34744097)
chr7 (358-414)||(38138623-38138679)
chr7 (382-414)||(39630109-39630141)
chr7 (87-123)||(40598404-40598440)
chr7 (177-209)||(46280289-46280321)
chr7 (359-415)||(46407429-46407485)
[»] chr8 (56 HSPs)
chr8 (324-418)||(1058184-1058278)
chr8 (325-418)||(14956406-14956499)
chr8 (359-415)||(40980999-40981055)
chr8 (360-423)||(29819026-29819089)
chr8 (99-209)||(18133677-18133795)
chr8 (100-209)||(26771286-26771403)
chr8 (359-413)||(2833465-2833520)
chr8 (98-209)||(35534543-35534662)
chr8 (86-209)||(43045643-43045774)
chr8 (80-161)||(42893402-42893483)
chr8 (359-413)||(2840239-2840294)
chr8 (359-413)||(2844926-2844981)
chr8 (365-415)||(4389822-4389873)
chr8 (379-418)||(35534774-35534813)
chr8 (324-418)||(41821425-41821517)
chr8 (360-410)||(9130456-9130506)
chr8 (324-418)||(28763239-28763333)
chr8 (360-414)||(36963491-36963545)
chr8 (85-130)||(14280338-14280383)
chr8 (350-414)||(37353374-37353439)
chr8 (381-421)||(11861686-11861726)
chr8 (86-126)||(31891923-31891963)
chr8 (359-415)||(34236041-34236097)
chr8 (86-150)||(36963272-36963336)
chr8 (86-150)||(38602415-38602479)
chr8 (359-407)||(40637438-40637486)
chr8 (360-411)||(5404500-5404551)
chr8 (86-125)||(9700114-9700153)
chr8 (343-410)||(9956931-9956998)
chr8 (178-209)||(10120777-10120808)
chr8 (86-125)||(16162873-16162912)
chr8 (379-418)||(18133552-18133591)
chr8 (360-407)||(21119072-21119119)
chr8 (86-161)||(27493014-27493089)
chr8 (86-161)||(30251372-30251447)
chr8 (99-206)||(1058008-1058122)
chr8 (368-414)||(29169030-29169076)
chr8 (372-414)||(29205676-29205718)
chr8 (86-209)||(35643906-35644037)
chr8 (382-420)||(38602233-38602271)
chr8 (86-159)||(44236741-44236815)
chr8 (86-132)||(44843393-44843439)
chr8 (99-132)||(6525923-6525956)
chr8 (87-132)||(9130238-9130283)
chr8 (86-127)||(10727455-10727496)
chr8 (350-415)||(26215375-26215440)
chr8 (350-391)||(40859844-40859885)
chr8 (121-161)||(6882004-6882044)
chr8 (86-126)||(7008710-7008750)
chr8 (178-206)||(9956832-9956860)
chr8 (359-403)||(10120648-10120692)
chr8 (386-414)||(12976086-12976114)
chr8 (362-402)||(15179034-15179074)
chr8 (86-130)||(15180647-15180691)
chr8 (100-132)||(38750463-38750495)
chr8 (89-161)||(43717855-43717927)
[»] chr1 (77 HSPs)
chr1 (350-420)||(5894289-5894359)
chr1 (324-418)||(37473265-37473359)
chr1 (359-414)||(47498978-47499033)
chr1 (350-427)||(33541844-33541921)
chr1 (324-417)||(41505554-41505647)
chr1 (359-415)||(27820475-27820531)
chr1 (363-414)||(24562452-24562503)
chr1 (323-418)||(38247320-38247414)
chr1 (361-427)||(33546597-33546663)
chr1 (86-209)||(37631477-37631608)
chr1 (87-161)||(50644174-50644248)
chr1 (359-413)||(51688576-51688630)
chr1 (86-161)||(2295173-2295248)
chr1 (86-161)||(3233933-3234008)
chr1 (359-413)||(6556889-6556943)
chr1 (337-415)||(14331658-14331736)
chr1 (360-418)||(41195340-41195398)
chr1 (359-412)||(27146383-27146436)
chr1 (359-412)||(30191863-30191916)
chr1 (379-424)||(34795569-34795614)
chr1 (98-159)||(36514606-36514667)
chr1 (359-415)||(1510454-1510510)
chr1 (89-161)||(5721002-5721074)
chr1 (323-427)||(5741519-5741623)
chr1 (89-161)||(5741683-5741755)
chr1 (359-418)||(14576798-14576857)
chr1 (351-418)||(22343954-22344021)
chr1 (93-209)||(49938768-49938892)
chr1 (368-413)||(4920894-4920940)
chr1 (368-418)||(17603525-17603575)
chr1 (99-202)||(29904779-29904890)
chr1 (86-124)||(30013997-30014035)
chr1 (359-413)||(30581683-30581737)
chr1 (99-161)||(38001672-38001734)
chr1 (368-418)||(49938614-49938664)
chr1 (349-414)||(473036-473101)
chr1 (357-413)||(8081769-8081825)
chr1 (360-411)||(24417817-24417869)
chr1 (375-411)||(27970424-27970460)
chr1 (87-123)||(29045852-29045888)
chr1 (161-208)||(473186-473233)
chr1 (178-209)||(10809366-10809397)
chr1 (359-418)||(17727240-17727299)
chr1 (368-414)||(34619506-34619553)
chr1 (361-415)||(35058893-35058948)
chr1 (86-161)||(38247404-38247479)
chr1 (88-159)||(39976130-39976201)
chr1 (98-156)||(33204324-33204382)
chr1 (87-161)||(37617384-37617458)
chr1 (99-161)||(38116189-38116251)
chr1 (364-418)||(43230894-43230948)
chr1 (379-421)||(45661260-45661302)
chr1 (163-209)||(47432116-47432162)
chr1 (361-411)||(51695631-51695681)
chr1 (173-206)||(2777916-2777949)
chr1 (362-415)||(9572246-9572299)
chr1 (178-207)||(10799485-10799514)
chr1 (359-392)||(27976372-27976405)
chr1 (89-118)||(30257804-30257833)
chr1 (177-206)||(41195210-41195239)
chr1 (350-415)||(45975569-45975634)
chr1 (323-427)||(5720838-5720942)
chr1 (379-411)||(7069183-7069215)
chr1 (178-206)||(7137016-7137044)
chr1 (381-413)||(8382621-8382653)
chr1 (363-414)||(10665960-10666014)
chr1 (161-209)||(15477586-15477634)
chr1 (87-123)||(28467548-28467584)
chr1 (351-411)||(29904633-29904693)
chr1 (359-414)||(31517872-31517928)
chr1 (368-415)||(33527275-33527323)
chr1 (178-206)||(38503483-38503511)
chr1 (88-132)||(42575389-42575433)
chr1 (379-415)||(45855730-45855766)
chr1 (362-413)||(48064189-48064241)
chr1 (379-415)||(51190726-51190762)
chr1 (161-209)||(51929540-51929588)
[»] chr3 (66 HSPs)
chr3 (87-209)||(20880497-20880627)
chr3 (359-413)||(30956771-30956825)
chr3 (359-413)||(30972583-30972637)
chr3 (337-415)||(31365395-31365473)
chr3 (324-418)||(35959566-35959660)
chr3 (362-415)||(46886835-46886888)
chr3 (337-412)||(1508704-1508779)
chr3 (324-418)||(20880343-20880437)
chr3 (89-206)||(21367691-21367816)
chr3 (161-209)||(30443914-30443962)
chr3 (359-418)||(42800058-42800117)
chr3 (88-161)||(584123-584196)
chr3 (359-419)||(944358-944419)
chr3 (87-161)||(32582817-32582888)
chr3 (359-411)||(39442321-39442373)
chr3 (86-161)||(402460-402535)
chr3 (350-413)||(402667-402730)
chr3 (86-141)||(25447163-25447218)
chr3 (359-418)||(34034037-34034096)
chr3 (350-413)||(34235202-34235265)
chr3 (86-161)||(39980806-39980881)
chr3 (162-209)||(43062712-43062759)
chr3 (359-412)||(2719341-2719394)
chr3 (360-413)||(20003430-20003483)
chr3 (359-424)||(24684968-24685033)
chr3 (379-415)||(849551-849587)
chr3 (379-415)||(3846046-3846082)
chr3 (384-416)||(10704713-10704745)
chr3 (350-406)||(23815941-23815997)
chr3 (359-407)||(28240213-28240261)
chr3 (359-415)||(31403237-31403293)
chr3 (379-415)||(38901965-38902001)
chr3 (379-415)||(42747916-42747952)
chr3 (359-415)||(47132246-47132302)
chr3 (87-130)||(24684741-24684784)
chr3 (99-158)||(31365119-31365178)
chr3 (360-411)||(34610942-34610993)
chr3 (350-413)||(35328289-35328351)
chr3 (86-161)||(42747700-42747775)
chr3 (86-125)||(44014716-44014755)
chr3 (178-209)||(50600196-50600227)
chr3 (324-415)||(53789571-53789662)
chr3 (99-157)||(31365240-31365298)
chr3 (177-206)||(3845579-3845608)
chr3 (381-414)||(18405985-18406018)
chr3 (88-161)||(24085258-24085331)
chr3 (89-130)||(26911699-26911740)
chr3 (337-390)||(30443658-30443711)
chr3 (90-131)||(33405114-33405155)
chr3 (164-209)||(36631055-36631100)
chr3 (360-409)||(47249604-47249653)
chr3 (177-209)||(901945-901977)
chr3 (359-395)||(5435731-5435767)
chr3 (86-126)||(11253613-11253653)
chr3 (359-407)||(12833871-12833919)
chr3 (86-138)||(16072959-16073011)
chr3 (350-418)||(20170389-20170457)
chr3 (86-118)||(24887218-24887250)
chr3 (359-414)||(27896317-27896373)
chr3 (350-409)||(35127497-35127557)
chr3 (98-150)||(36783282-36783334)
chr3 (87-115)||(36878693-36878721)
chr3 (383-423)||(39602337-39602377)
chr3 (177-209)||(39980750-39980782)
chr3 (177-209)||(46478710-46478742)
chr3 (77-125)||(51929854-51929901)
[»] chr5 (65 HSPs)
chr5 (86-209)||(16937801-16937932)
chr5 (324-421)||(3735601-3735698)
chr5 (359-415)||(9202883-9202939)
chr5 (350-410)||(19460512-19460572)
chr5 (86-161)||(10640030-10640105)
chr5 (86-209)||(7705916-7706047)
chr5 (359-413)||(24030547-24030601)
chr5 (361-418)||(7706126-7706183)
chr5 (88-209)||(9107111-9107240)
chr5 (350-418)||(32372490-32372558)
chr5 (337-412)||(7319134-7319209)
chr5 (86-164)||(32010019-32010097)
chr5 (361-418)||(39477827-39477884)
chr5 (161-209)||(12857706-12857754)
chr5 (350-414)||(28776855-28776919)
chr5 (350-398)||(39105360-39105408)
chr5 (350-417)||(16938003-16938070)
chr5 (359-418)||(25461900-25461959)
chr5 (333-416)||(32941339-32941421)
chr5 (359-414)||(40426632-40426687)
chr5 (350-416)||(42573905-42573972)
chr5 (352-418)||(25460958-25461024)
chr5 (87-161)||(39594884-39594958)
chr5 (350-411)||(1465145-1465206)
chr5 (379-416)||(36145200-36145237)
chr5 (380-417)||(37954580-37954617)
chr5 (379-420)||(42500374-42500415)
chr5 (161-209)||(12857339-12857387)
chr5 (86-158)||(15246913-15246985)
chr5 (359-415)||(24029937-24029993)
chr5 (350-409)||(39247984-39248044)
chr5 (86-161)||(1464938-1465013)
chr5 (362-397)||(3569097-3569132)
chr5 (87-126)||(8820872-8820911)
chr5 (350-413)||(10639825-10639887)
chr5 (360-395)||(10772014-10772049)
chr5 (359-414)||(13697904-13697959)
chr5 (360-415)||(31051767-31051822)
chr5 (110-161)||(41981645-41981696)
chr5 (87-141)||(11700259-11700313)
chr5 (359-413)||(12554334-12554388)
chr5 (349-415)||(32703573-32703639)
chr5 (163-209)||(37954707-37954753)
chr5 (85-161)||(1773023-1773097)
chr5 (360-413)||(3520302-3520355)
chr5 (343-404)||(7984868-7984929)
chr5 (90-159)||(11064745-11064814)
chr5 (365-414)||(12433521-12433570)
chr5 (176-209)||(42500257-42500290)
chr5 (89-125)||(2092472-2092508)
chr5 (178-206)||(4014442-4014470)
chr5 (89-125)||(12334279-12334315)
chr5 (98-150)||(12425661-12425713)
chr5 (90-130)||(22209746-22209786)
chr5 (86-161)||(24030096-24030169)
chr5 (86-126)||(26004915-26004955)
chr5 (177-209)||(29925862-29925894)
chr5 (178-206)||(34160755-34160783)
chr5 (177-205)||(35446080-35446108)
chr5 (86-118)||(40335791-40335823)
chr5 (361-413)||(40439102-40439153)
chr5 (368-412)||(40452189-40452233)
chr5 (100-132)||(42569544-42569576)
chr5 (379-415)||(42583493-42583529)
chr5 (359-391)||(42646548-42646580)
[»] chr6 (37 HSPs)
chr6 (359-415)||(264250-264306)
chr6 (337-418)||(6538383-6538464)
chr6 (361-418)||(34430582-34430639)
chr6 (324-415)||(24626164-24626255)
chr6 (359-415)||(35069431-35069487)
chr6 (85-132)||(34404643-34404690)
chr6 (86-132)||(835179-835225)
chr6 (87-161)||(4163230-4163304)
chr6 (87-161)||(4224851-4224925)
chr6 (360-410)||(9632785-9632835)
chr6 (365-411)||(10645470-10645516)
chr6 (365-414)||(14929604-14929653)
chr6 (363-407)||(8365113-8365157)
chr6 (381-413)||(13907491-13907523)
chr6 (383-418)||(31623446-31623481)
chr6 (178-209)||(31624959-31624990)
chr6 (359-414)||(32014097-32014152)
chr6 (86-132)||(103536-103582)
chr6 (86-160)||(848067-848140)
chr6 (92-126)||(3738213-3738247)
chr6 (379-413)||(9604741-9604775)
chr6 (87-161)||(10645304-10645378)
chr6 (177-206)||(835041-835070)
chr6 (177-210)||(3153508-3153541)
chr6 (89-126)||(12111079-12111116)
chr6 (324-397)||(18076083-18076156)
chr6 (89-161)||(26559160-26559233)
chr6 (86-127)||(30536883-30536924)
chr6 (86-127)||(32205931-32205972)
chr6 (86-159)||(34882339-34882412)
chr6 (177-209)||(160969-161001)
chr6 (359-415)||(658580-658636)
chr6 (178-206)||(835267-835295)
chr6 (178-206)||(837234-837262)
chr6 (100-160)||(2455066-2455126)
chr6 (359-415)||(23063663-23063719)
chr6 (359-418)||(30926406-30926463)
[»] scaffold0018 (1 HSPs)
scaffold0018 (324-418)||(157973-158067)
[»] chr4 (63 HSPs)
chr4 (324-414)||(17204008-17204098)
chr4 (86-209)||(54426064-54426195)
chr4 (359-414)||(27028-27083)
chr4 (323-416)||(18814960-18815052)
chr4 (325-418)||(24169127-24169220)
chr4 (100-161)||(40174634-40174695)
chr4 (366-418)||(45935365-45935417)
chr4 (85-161)||(49940084-49940160)
chr4 (362-418)||(50662870-50662926)
chr4 (350-413)||(11389407-11389470)
chr4 (86-206)||(17822783-17822911)
chr4 (360-415)||(35571763-35571818)
chr4 (379-418)||(39603596-39603635)
chr4 (86-141)||(39691067-39691122)
chr4 (358-417)||(44797759-44797818)
chr4 (86-209)||(26783-26913)
chr4 (86-132)||(35571549-35571595)
chr4 (87-161)||(41336837-41336911)
chr4 (359-413)||(44863097-44863151)
chr4 (324-418)||(50681199-50681293)
chr4 (350-415)||(35571958-35572022)
chr4 (359-411)||(3155486-3155538)
chr4 (86-150)||(18815111-18815175)
chr4 (86-126)||(22662169-22662209)
chr4 (86-126)||(22666648-22666688)
chr4 (161-209)||(46588074-46588122)
chr4 (161-209)||(46592210-46592258)
chr4 (365-420)||(47771869-47771925)
chr4 (86-161)||(1374494-1374569)
chr4 (87-126)||(22796767-22796806)
chr4 (359-414)||(25904359-25904414)
chr4 (86-141)||(27043748-27043803)
chr4 (86-125)||(28615447-28615486)
chr4 (324-418)||(43505824-43505916)
chr4 (86-161)||(55437153-55437228)
chr4 (379-417)||(2243944-2243982)
chr4 (87-148)||(6987660-6987722)
chr4 (89-123)||(25896899-25896933)
chr4 (350-415)||(26520355-26520421)
chr4 (87-125)||(37575855-37575893)
chr4 (361-411)||(44138442-44138492)
chr4 (89-159)||(49003963-49004033)
chr4 (365-413)||(17823019-17823068)
chr4 (89-203)||(22030230-22030352)
chr4 (87-132)||(24169369-24169414)
chr4 (87-124)||(44638145-44638182)
chr4 (359-418)||(53294235-53294293)
chr4 (165-206)||(55064859-55064900)
chr4 (86-159)||(55414331-55414404)
chr4 (161-209)||(437245-437293)
chr4 (178-206)||(825508-825536)
chr4 (177-209)||(2244072-2244104)
chr4 (379-415)||(4212811-4212847)
chr4 (86-126)||(9720572-9720612)
chr4 (88-148)||(15173223-15173283)
chr4 (86-161)||(23319930-23320003)
chr4 (379-415)||(27330190-27330226)
chr4 (86-150)||(29388702-29388766)
chr4 (178-206)||(44138583-44138611)
chr4 (365-413)||(47119086-47119134)
chr4 (381-413)||(49202527-49202559)
chr4 (178-206)||(50004162-50004190)
chr4 (89-161)||(52315118-52315190)
[»] scaffold0050 (1 HSPs)
scaffold0050 (350-413)||(58475-58538)


Alignment Details
Target: chr2 (Bit Score: 394; Significance: 0; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 18 - 497
Target Start/End: Original strand, 1633350 - 1633829
Alignment:
Q  18 atgcttatttatgaggtattttgtttttagatatactaattgaaatcgagtgaagttgtacttgggcgctgtttggatttacttatttgagtttatctac 117  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1633350 atgcttatttatgaggtattttgtttttagatatgctaactgaaatcgagtgaagttgtacttgggcgctatttggatttacttatttgagtttatctac 1633449  T
Q  118 tagcataagttttgttatactgttagggagaacctatgaaaacacaattttcactagcctttttcagcttattttcataagttctccaatatttcacaag 217  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1633450 tagcataagttttgttatactgttagggagaacttatgaaaacacaattttcactagcctttttcagcttattttcataagttctccaatatttcacaag 1633549  T
Q  218 nnnnnnncggcttattttcctaagttctacaatatactagcttttaaaatcggcttatagcatatnnnnnnnntctaactttattttatctttgnnnnnn 317  Q
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||          
T  1633550 tttttttcggcttattttcctaagttctacaatatactagcttttaaaatcggcttatagcatataaaaaaaatctaactttattttatctttgtttttt 1633649  T
Q  318 naaatttataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggcc 417  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1633650 taaatttataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggcc 1633749  T
Q  418 ccaactcaactgacaattggcgatattgttaggttggacactttcattgaggtttgaaatttgaacccaggacctcacag 497  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1633750 ccaactcaactgacaattggcgatattgttaggttggacactttcactgaggtttgaaatttgaacccaggacctcacag 1633829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 337 - 415
Target Start/End: Complemental strand, 41407248 - 41407170
Alignment:
Q  337 tatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||||| | |||||||  ||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  41407248 tatgtaagcttatacataagtgcttatcatgataagcgcttgtgctataagctgcaaacaagctgtttatccaaacagg 41407170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 417
Target Start/End: Original strand, 15757811 - 15757869
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggcc 417  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||    
T  15757811 cttatcatgataagcgcttgtgctataagctgaaaataagctgtttatccaaacaggcc 15757869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 412
Target Start/End: Complemental strand, 12795717 - 12795664
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaac 412  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  12795717 cttatcatgataagcacttatgctataaactgcaaataaactgtttatccaaac 12795664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 209
Target Start/End: Complemental strand, 20952506 - 20952376
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca--------caattttcactagcctt 178  Q
    |||||||||| ||||||||||| |||| |||| ||| ||||||||||| ||| ||   |||||| ||||||||||        ||||||||| || | ||    
T  20952506 tgtttggattgacttatttgagcttatatactggcaaaagttttgttagactatttaagagaacttatgaaaacagtttatgccaattttcattaacttt 20952407  T
Q  179 tttcagcttattttcataagttctccaatat 209  Q
    ||||| |||||||||||||||||||||||||    
T  20952406 tttcaacttattttcataagttctccaatat 20952376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 415
Target Start/End: Original strand, 39659644 - 39659709
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||  |||||||||||||||| || |||| ||||||||||||||| ||||||||||||||||    
T  39659644 acataagcgcttatcatgataagcatttgtgctctaagctgcaaataagttgtttatccaaacagg 39659709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 86 - 209
Target Start/End: Original strand, 42868399 - 42868515
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaacacaattttcactagcctttttcagc 185  Q
    |||||||||||  |||||||||| ||||||| | ||||| |||| || | |||||| |||||||| ||||| ||      |||||| ||| |||||||||    
T  42868399 ctgtttggattgccttatttgagcttatctattggcatacgtttcgtgacactgtttgggagaacttatgacaa------tttcac-agcttttttcagc 42868491  T
Q  186 ttattttcataagttctccaatat 209  Q
    ||||||||||||||||||||||||    
T  42868492 ttattttcataagttctccaatat 42868515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 2142806 - 2142731
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||| || ||||||||||||||||||||  ||||||||||| | | |||||| |||||||| ||||||||||    
T  2142806 ctgtttggtttgacttatttgagtttatctacatgcataagttttatgagactgtttgggagaacttatgaaaaca 2142731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 410
Target Start/End: Original strand, 10619350 - 10619401
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaa 410  Q
    ||||||||||||||||||||| |||||| || ||||||||||||||||||||    
T  10619350 cttatcatgataagcacttctactataaactacaaataagctgtttatccaa 10619401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 43570351 - 43570297
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||||| |||||||    
T  43570351 cttatcatgataagtgcttgtgctataagctgcaaataagctgtttacccaaaca 43570297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 30331902 - 30331830
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaa 159  Q
    |||||||||| |||||||| || |||||||||  |||||||||||| | |||||| |||||||| ||||||||    
T  30331902 tgtttggattgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaa 30331830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 38010335 - 38010283
Alignment:
Q  361 tatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||| |||||    
T  38010335 tatcatgataagcacttgtgatataagctgcaaataagttgtttatctaaaca 38010283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 2416257 - 2416194
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||  |||| ||||||||| |||| |||||||||||| ||||||| ||||||||||||||    
T  2416257 acataagcacttaacatgataagaacttgtgctataagctgaaaataagttgtttatccaaaca 2416194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 415
Target Start/End: Complemental strand, 4606911 - 4606860
Alignment:
Q  364 catgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||||||||| || |||||||||| |||||| ||||||||||||||||    
T  4606911 catgataagcacttgtgttataagctgcgaataagttgtttatccaaacagg 4606860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 360 - 411
Target Start/End: Complemental strand, 26626810 - 26626759
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaa 411  Q
    |||||||||||||  ||| |||||||||||||||||||| ||||||||||||    
T  26626810 ttatcatgataagagcttatgctataagctgcaaataagttgtttatccaaa 26626759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 31561664 - 31561735
Alignment:
Q  90 ttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||| ||||||||||| |||||||||| |||||||||||| | |||||| |||| ||| | ||||||||    
T  31561664 ttggattgacttatttgagattatctactaacataagttttgtaaaactgtttgggaaaacttttgaaaaca 31561735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 414
Target Start/End: Complemental strand, 36534723 - 36534668
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    ||||||||||||||||||| || ||||| ||| ||||||| |||||||||||||||    
T  36534723 cttatcatgataagcacttatgttataaactgaaaataagttgtttatccaaacag 36534668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 2416464 - 2416390
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||| |||| |||||||||||||||||||||| |||||||||||| | |||| | || ||||| ||| ||||||    
T  2416464 tgtttagattgacttatttgagtttatctactaacataagttttgtgaaactgcttggaagaacttattaaaaca 2416390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 18179101 - 18179055
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgt 132  Q
    ||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  18179101 ctgtttggattgacttatttgagcttatctactaacataagttttgt 18179055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 41812228 - 41812278
Alignment:
Q  368 ataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||| ||||| |||||||| ||||||||||| |||||||||||||||||||    
T  41812228 ataatcacttgtgctataaactgcaaataagttgtttatccaaacaggccc 41812278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 411
Target Start/End: Complemental strand, 16451082 - 16451021
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaa 411  Q
    ||||||| |||||||||||| ||  ||| |||| ||||||||||||||| ||||||||||||    
T  16451082 acataagctcttatcatgatcagtgcttatgctgtaagctgcaaataagatgtttatccaaa 16451021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 337 - 415
Target Start/End: Original strand, 41293354 - 41293434
Alignment:
Q  337 tatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgc--aaataagctgtttatccaaacagg 415  Q
    |||||||||| | ||||| |  |||| ||||||| |||||| |||||||||||||  ||||||| ||||||||||||||||    
T  41293354 tatgtaagcttacacatacgcgcttaccatgatacgcacttgtgctataagctgcaaaaataagttgtttatccaaacagg 41293434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 42659262 - 42659355
Alignment:
Q  325 ataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||| ||| |||||||||| | |||||||  ||||||||||||||    | |||||| ||||||||||||| |  ||||||||||||||||    
T  42659262 ataaaaatagcttatgtaagcttatacataagcgcttatcatgataagtgtgtgtgctattagctgcaaataagtttcttatccaaacaggccc 42659355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 406
Target Start/End: Complemental strand, 3312002 - 3311922
Alignment:
Q  326 taaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttat 406  Q
    |||||||||| |||||| ||| | |||||||  ||| ||||||||| ||||| |||||||||||| ||||||  |||||||    
T  3312002 taaaaacagcttatgtatgcttatacataagcacttttcatgataatcacttgtgctataagctgaaaataatttgtttat 3311922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 407
Target Start/End: Original strand, 5599195 - 5599243
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatc 407  Q
    ||||| ||||||||||||| |||||||||||||||||||| | ||||||    
T  5599195 cttattatgataagcacttatgctataagctgcaaataagttttttatc 5599243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 10619138 - 10619267
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca--------caattttcactagcct 177  Q
    ||||||||||| ||| |||||||||||||||||  || ||||||||| | ||   | ||||||||  |||||||||        |||||||| | ||| |    
T  10619138 ctgtttggattgactcatttgagtttatctactgacacaagttttgtgagaccccttgggagaactcatgaaaacagcttatgtcaattttctcgagcat 10619237  T
Q  178 ttttcagcttattttcataagttctccaat 207  Q
    |||||||||||||||||||||| |||||||    
T  10619238 ttttcagcttattttcataagtactccaat 10619267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 20926572 - 20926524
Alignment:
Q  161 acaattttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    |||||||||| |||| ||||||| ||||||||||||||||||| |||||    
T  20926572 acaattttcattagcttttttcaacttattttcataagttctctaatat 20926524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 20933877 - 20933829
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgttat 135  Q
    ||||||||||| |||||||||| ||||||| ||||| ||||||||||||    
T  20933877 tgtttggattttcttatttgagcttatctattagcagaagttttgttat 20933829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 26202097 - 26202049
Alignment:
Q  161 acaattttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||||||    
T  26202097 acaattttcataagcttttttcaacttattttcataagttctccaatat 26202049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 40835597 - 40835549
Alignment:
Q  161 acaattttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||| ||| |||||  ||||||||||||||||||||||||||    
T  40835597 acaattttcacaagctttttttggcttattttcataagttctccaatat 40835549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 415
Target Start/End: Original strand, 41880642 - 41880694
Alignment:
Q  364 catgataagcacttctgctataagctgcaaa-taagctgtttatccaaacagg 415  Q
    |||||||||| ||| |||||||||||||||| |||| ||||||||||||||||    
T  41880642 catgataagcgcttgtgctataagctgcaaagtaagttgtttatccaaacagg 41880694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 42419942 - 42419870
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||| |||||||||||||||||| ||  |||||||||| | | |||||| |||||||| || |||||||    
T  42419942 tttggattgacttatttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaaca 42419870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 130
Target Start/End: Complemental strand, 449998 - 449955
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagtttt 130  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||    
T  449998 tgtttgcattaacttatttgagcttatctactagcataagtttt 449955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 415
Target Start/End: Original strand, 5745560 - 5745611
Alignment:
Q  364 catgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||| | ||| || ||||||||||||||||||| ||||||||||||||    
T  5745560 catgataaacgcttgtgatataagctgcaaataagctctttatccaaacagg 5745611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 15305561 - 15305522
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  15305561 tgctaaaagttgcaaataagctgtttatccaaacaggccc 15305522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 27317531 - 27317456
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||||||| ||||||||||| ||||||||   |||||||||| | | |||||| | |||||| ||||||||||    
T  27317531 ctgtttggattgacttatttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaaca 27317456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 411
Target Start/End: Complemental strand, 41851455 - 41851408
Alignment:
Q  364 catgataagcacttctgctataagctgcaaataagctgtttatccaaa 411  Q
    |||||||||| ||| ||||||| |||||||||||| ||||||||||||    
T  41851455 catgataagcgcttgtgctatatgctgcaaataagatgtttatccaaa 41851408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 416
Target Start/End: Complemental strand, 2195878 - 2195848
Alignment:
Q  386 agctgcaaataagctgtttatccaaacaggc 416  Q
    |||||||||||||||||||||||||||||||    
T  2195878 agctgcaaataagctgtttatccaaacaggc 2195848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 413
Target Start/End: Original strand, 14220963 - 14220997
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaaca 413  Q
    ||||||||||| |||||||||||||||||||||||    
T  14220963 tgctataagctacaaataagctgtttatccaaaca 14220997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 413
Target Start/End: Complemental strand, 40835469 - 40835435
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||||||||||||||| ||||||||||||||    
T  40835469 tgctataagctgcaaataagttgtttatccaaaca 40835435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 417
Target Start/End: Complemental strand, 43036545 - 43036507
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacaggcc 417  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  43036545 tgctataagcggcaaataagttgtttatccaaacaggcc 43036507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 418
Target Start/End: Original strand, 43279703 - 43279733
Alignment:
Q  388 ctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||||||||||||||||||||||||||    
T  43279703 ctgcaaataagctgtttatccaaacaggccc 43279733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 45229576 - 45229538
Alignment:
Q  165 ttttcactagcctttttcagcttattttcataagttctc 203  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  45229576 ttttcattagcttttttcagcttattttcataagttctc 45229538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 132
Target Start/End: Original strand, 5365514 - 5365543
Alignment:
Q  103 tttgagtttatctactagcataagttttgt 132  Q
    ||||||||||||||||||||||||||||||    
T  5365514 tttgagtttatctactagcataagttttgt 5365543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 415
Target Start/End: Original strand, 7043880 - 7043913
Alignment:
Q  382 tataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||||||||| ||||||||||||||||    
T  7043880 tataagctgcaaataagttgtttatccaaacagg 7043913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 413
Target Start/End: Complemental strand, 9395064 - 9395011
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||||||||  ||| |||||||||| ||||||||||| | ||||||||||    
T  9395064 ttatcatgataagagcttgtgctataagccgcaaataagctatgtatccaaaca 9395011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 415
Target Start/End: Original strand, 19608751 - 19608816
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||  ||||||||| || |  ||| |||||||||||||||||| ||||| ||||||||||||    
T  19608751 acataagtgcttatcatggtatgtgcttgtgctataagctgcaaatatgctgtatatccaaacagg 19608816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 417
Target Start/End: Original strand, 23974600 - 23974693
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggcc 417  Q
    |||||||| ||| || ||||||| |  ||||||  |||||| || | | ||||| || |||||||| ||||||||||| |||||||||||||||    
T  23974600 tataaaaatagcttaagtaagcttatgcataagtgcttatcttgcttatcacttgtgatataagctccaaataagctgcttatccaaacaggcc 23974693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 209
Target Start/End: Complemental strand, 24347772 - 24347743
Alignment:
Q  180 ttcagcttattttcataagttctccaatat 209  Q
    ||||||||||||||||||||||||||||||    
T  24347772 ttcagcttattttcataagttctccaatat 24347743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 32592655 - 32592606
Alignment:
Q  161 acaattttcactagcctttttcagcttattttcataagttctccaatatt 210  Q
    ||||||||||  ||| ||| ||| ||||||||||||||||||||||||||    
T  32592655 acaattttcataagcttttctcaacttattttcataagttctccaatatt 32592606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 33319829 - 33319858
Alignment:
Q  177 tttttcagcttattttcataagttctccaa 206  Q
    ||||||||||||||||||||||||||||||    
T  33319829 tttttcagcttattttcataagttctccaa 33319858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 415
Target Start/End: Original strand, 40682499 - 40682564
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||  |||| |||||||||| |||  ||||| || |||||||||| ||||||||||||||||    
T  40682499 acataagcgcttaccatgataagcgcttgcgctatgagttgcaaataagatgtttatccaaacagg 40682564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 41702320 - 41702377
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaat-aagctgtttatccaaacagg 415  Q
    ||||||||||||||   || |||||||||||| |||| ||||||||||||||||||||    
T  41702320 cttatcatgataagtgtttttgctataagctgaaaattaagctgtttatccaaacagg 41702377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 209
Target Start/End: Original strand, 43279469 - 43279578
Alignment:
Q  110 ttatctactagcataagttttgttatactgttagggaga--acctatgaaaaca--------caattttcactagcctttttcagcttattttcataagt 199  Q
    ||||||||||||||||||||||| | |||||| ||||||  |  ||||||||||        |||||||||  ||| ||||||| |||||||||| ||||    
T  43279469 ttatctactagcataagttttgtgagactgtttgggagagaatttatgaaaacagcttatgacaattttcataagcttttttcaacttattttcacaagt 43279568  T
Q  200 tctccaatat 209  Q
    ||||||||||    
T  43279569 tctccaatat 43279578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 7928317 - 7928345
Alignment:
Q  178 ttttcagcttattttcataagttctccaa 206  Q
    |||||||||||||||||||||||||||||    
T  7928317 ttttcagcttattttcataagttctccaa 7928345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 9174964 - 9174912
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcataagttttgttatactgtt 141  Q
    |||||||||||||||||||| ||||||| | ||||||||| ||| | ||||||    
T  9174964 tttggatttacttatttgagcttatctattggcataagttatgtgagactgtt 9174912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 415
Target Start/End: Complemental strand, 12194869 - 12194821
Alignment:
Q  367 gataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||| |||||||||||  ||||||| |||||| |||||||||    
T  12194869 gataagcacttgtgctataagctataaataagttgtttaaccaaacagg 12194821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 12195021 - 12194973
Alignment:
Q  161 acaattttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||  ||| ||||||| |||||||||| ||||||||||||||    
T  12195021 acaattttcataagcttttttcaacttattttcacaagttctccaatat 12194973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 12289850 - 12289818
Alignment:
Q  177 tttttcagcttattttcataagttctccaatat 209  Q
    ||||||| |||||||||||||||||||||||||    
T  12289850 tttttcaacttattttcataagttctccaatat 12289818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 12464479 - 12464519
Alignment:
Q  166 tttcactagcctttttcagcttattttcataagttctccaa 206  Q
    |||||| ||| |||||||||||||||||| |||||||||||    
T  12464479 tttcacaagcttttttcagcttattttcacaagttctccaa 12464519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 15370241 - 15370281
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataag 126  Q
    ||||||||||| ||||||||||| ||||||||| |||||||    
T  15370241 ctgtttggattgacttatttgagcttatctactggcataag 15370281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 206
Target Start/End: Complemental strand, 16398166 - 16398138
Alignment:
Q  178 ttttcagcttattttcataagttctccaa 206  Q
    |||||||||||||||||||||||||||||    
T  16398166 ttttcagcttattttcataagttctccaa 16398138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 26143658 - 26143686
Alignment:
Q  178 ttttcagcttattttcataagttctccaa 206  Q
    |||||||||||||||||||||||||||||    
T  26143658 ttttcagcttattttcataagttctccaa 26143686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 411
Target Start/End: Original strand, 27695732 - 27695784
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaa 411  Q
    ||||||||||||||   || ||||||||||| |||||||| ||||||||||||    
T  27695732 cttatcatgataagtgtttgtgctataagctacaaataagttgtttatccaaa 27695784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 28792365 - 28792401
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  28792365 tgctataagctgcaagtaagctttttatccaaacagg 28792401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 413
Target Start/End: Complemental strand, 40279122 - 40279082
Alignment:
Q  373 cacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    ||||| ||||||||||| |||||||| ||||||||||||||    
T  40279122 cacttgtgctataagctacaaataagttgtttatccaaaca 40279082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 414
Target Start/End: Original strand, 21568738 - 21568828
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    |||||||| ||| |||| ||||| | |||||||  ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  21568738 tataaaaatagcttatgcaagcttatacataagtgcttatcatgataagcacttatgctataagctgcaaacaagctgtttatccaaacag 21568828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 360 - 418
Target Start/End: Original strand, 27863843 - 27863901
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||    
T  27863843 ttatcatgataagcacttgtgctataagctacaaataagttgtttatccaaacaggccc 27863901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 413
Target Start/End: Complemental strand, 33678724 - 33678663
Alignment:
Q  352 ataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    ||||| |||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  33678724 ataagctcttatcatgataagcacttgtgctataagatgcaaataagctgtttgtccaaaca 33678663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 418
Target Start/End: Original strand, 38500054 - 38500122
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||  ||||||||||||||| ||| |||||||| |||||||||||||||||||| ||||||||||    
T  38500054 acataagcgcttatcatgataagcgcttgtgctataaactgcaaataagctgtttatctaaacaggccc 38500122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 413
Target Start/End: Complemental strand, 47795891 - 47795838
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||| |||||    
T  47795891 ttatcatgataagcgcttatgctataagctgcaaataagctgtttatctaaaca 47795838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 418
Target Start/End: Complemental strand, 33128682 - 33128623
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||||||||||   || |||| |||||||||||||||||||||||||||||||||||    
T  33128682 cttatcatgataagtgtttgtgctgtaagctgcaaataagctgtttatccaaacaggccc 33128623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 380 - 418
Target Start/End: Complemental strand, 9210532 - 9210494
Alignment:
Q  380 gctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9210532 gctataagctgcaaataagctgtttatccaaacaggccc 9210494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 359 - 413
Target Start/End: Original strand, 18865195 - 18865249
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||||||||||  || |||||||||||||||||||| ||||||||||||||    
T  18865195 cttatcatgataagcgtttgtgctataagctgcaaataagttgtttatccaaaca 18865249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 414
Target Start/End: Original strand, 3308375 - 3308452
Alignment:
Q  337 tatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    ||||||| || | |||||||  |||||||||| ||| |||| ||||||||||| ||||||||||||||||| ||||||    
T  3308375 tatgtaaccttatacataagcacttatcatgaaaagtacttgtgctataagctccaaataagctgtttatctaaacag 3308452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 418
Target Start/End: Original strand, 30571088 - 30571127
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  30571088 tgctataagctgcaaataagctgtttatccaaacacgccc 30571127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 418
Target Start/End: Original strand, 40252242 - 40252300
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||| ||||| || | |||||||||||||| ||||| |||||||||||||||||||    
T  40252242 ttatcataataagaacatgtgctataagctgcatataaggtgtttatccaaacaggccc 40252300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 415
Target Start/End: Original strand, 23989620 - 23989685
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||| ||||||||||||||| | | | |||||||||||||||||| ||||  ||||||||||    
T  23989620 acataagaacttatcatgataagcgcgtgtactataagctgcaaataagttgttactccaaacagg 23989685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 45338602 - 45338541
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaac 150  Q
    ||||||||  |||||||||||||||| ||||||||||||||| | | |||||| ||||||||    
T  45338602 tttggattggcttatttgagtttatccactagcataagttttttgagactgtttgggagaac 45338541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 420417 - 420381
Alignment:
Q  173 agcctttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||| |||||||||||||||||||||||||    
T  420417 agcctttttcaacttattttcataagttctccaatat 420381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 39393710 - 39393766
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||| |   ||| ||||||||||||||||||||||||| |||||||||||    
T  39393710 cttatcatgatcaaagcttgtgctataagctgcaaataagctgttcatccaaacagg 39393766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 415
Target Start/End: Complemental strand, 46139877 - 46139821
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||||||  ||| || ||||||||||||||||| |||||| |||||||||    
T  46139877 cttatcatgataagtgcttgtgttataagctgcaaataagttgtttaaccaaacagg 46139821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 46280404 - 46280460
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||||| | ||| |||||||||||  |||||| |||||||||||||||||    
T  46280404 cttatcatgataaacgcttgtgctataagctataaataaactgtttatccaaacagg 46280460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 119814 - 119775
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  119814 tgctataagctgcagataagctttttatccaaacaggccc 119775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 4970710 - 4970785
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||||||| ||||||||||| ||||||  |  ||||||| |||| | |||||| |||||||| ||||||||||    
T  4970710 ctgtttggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgggagaacttatgaaaaca 4970785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 411
Target Start/End: Original strand, 4970898 - 4970985
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaa 411  Q
    |||| ||| ||| |||||||||| | ||||||   ||||||||| || | |||| | ||||||||||||||||||| |||||||||||    
T  4970898 tatagaaatagcttatgtaagcttatacataaccgcttatcatggtagggactttttctataagctgcaaataagccgtttatccaaa 4970985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 5947066 - 5947027
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  5947066 tgctataagcttcaaataagctatttatccaaacaggccc 5947027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 25596184 - 25596109
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||||| | ||||||||||| |||||||| ||||||||  |||| | | ||||||||| ||||||| ||||||    
T  25596184 ctgtttggactgacttatttgagcttatctaccagcataagcattgtgagattgttagggaaaacctataaaaaca 25596109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 28614502 - 28614455
Alignment:
Q  161 acaattttcactagcctttttcagcttattttcataagttctccaata 208  Q
    ||||||||||| ||| |||||||| ||| |||||||||||||||||||    
T  28614502 acaattttcacaagcttttttcagtttaatttcataagttctccaata 28614455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 421
Target Start/End: Complemental strand, 33673022 - 33672951
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccccaa 421  Q
    |||||||  |||||||| ||||  |||| |||||||||||||||||||   ||||||||||||||| |||||    
T  33673022 acataagcgcttatcataataaatacttgtgctataagctgcaaataaatagtttatccaaacagggcccaa 33672951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 36517729 - 36517654
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||||||| | ||||||||| ||| ||||| ||||||||||| | | |||||| |||||||| ||| ||||||    
T  36517729 ctgtttggattcatttatttgagcttagctactggcataagttttctaagactgtttgggagaacttattaaaaca 36517654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 418
Target Start/End: Original strand, 40377997 - 40378032
Alignment:
Q  383 ataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||||||||||| |||||||||||||||||||    
T  40377997 ataagctgcaaataagttgtttatccaaacaggccc 40378032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 45264014 - 45263959
Alignment:
Q  363 tcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||||||| ||| ||  |||||| ||||||||| |||||||||||||||||||    
T  45264014 tcatgataagcgcttgtgtgataagccgcaaataagttgtttatccaaacaggccc 45263959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 20526597 - 20526523
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||| ||||||||||||||||||| | | | || |||||| | |||||| | |||||| ||||||||||    
T  20526597 tgtttggattgacttatttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaaca 20526523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 413
Target Start/End: Original strand, 20881755 - 20881825
Alignment:
Q  343 agctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||| |||||||| ||||||||||||||  ||| |||||||| || |||||||| |||| ||| |||||    
T  20881755 agctcatacataagagcttatcatgataagtgcttgtgctataaactacaaataagttgttcatctaaaca 20881825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 414
Target Start/End: Original strand, 28341234 - 28341264
Alignment:
Q  384 taagctgcaaataagctgtttatccaaacag 414  Q
    |||||||||||||||||||||||||||||||    
T  28341234 taagctgcaaataagctgtttatccaaacag 28341264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 44822110 - 44822064
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgt 132  Q
    ||||||||||| |||||||||||||||||| ||  ||||||||||||    
T  44822110 ctgtttggattgacttatttgagtttatctgctgacataagttttgt 44822064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 418
Target Start/End: Complemental strand, 46078107 - 46078013
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||| | | |||||||||| | |||||||  |||||||||||| |   || |||| |||| |||| ||||||||||| |||||||||||||    
T  46078107 tataaaaataacttatgtaagcttatacataagcgcttatcatgatatgtgtttgtgctttaagttgcatataagctgtttgtccaaacaggccc 46078013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 418
Target Start/End: Complemental strand, 19131228 - 19131159
Alignment:
Q  349 aacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||||  |||||||| | |||| |||  ||| ||||||||||| |||||||||||| ||||||||||    
T  19131228 aacataagcacttatcataagaagcgcttgagctgtaagctgcaaacaagctgtttatcgaaacaggccc 19131159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 416
Target Start/End: Complemental strand, 19131275 - 19131238
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacaggc 416  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  19131275 tgctataagcttcaaacaagctgtttatccaaacaggc 19131238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 411
Target Start/End: Original strand, 20526646 - 20526707
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaa 411  Q
    |||||||| || ||||| ||||||| || ||||||||| |||||||||  ||||||||||||    
T  20526646 acataagagctaatcattataagcatttgtgctataaggtgcaaataatgtgtttatccaaa 20526707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 39542221 - 39542258
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcataag 126  Q
    ||||| || |||||||||||||||||||||||||||||    
T  39542221 tttgggttgacttatttgagtttatctactagcataag 39542258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 45790441 - 45790474
Alignment:
Q  176 ctttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||||||||||||||||| ||||||||    
T  45790441 ctttttcagcttattttcataagttatccaatat 45790474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 47134676 - 47134733
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttag 143  Q
    ||||||||||| |||||||||||||||| ||| | ||||||| || ||| ||||||||    
T  47134676 ctgtttggattgacttatttgagtttatttaccaccataagtatttttagactgttag 47134733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 407
Target Start/End: Complemental strand, 17248482 - 17248434
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatc 407  Q
    |||||||||||||| |||| ||||||||| || ||||||| ||||||||    
T  17248482 cttatcatgataagaacttgtgctataagttgtaaataaggtgtttatc 17248434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 18962501 - 18962573
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaa 158  Q
    ||||||||||| | ||||| ||  |||||||||  |||||||||||||| ||||||  ||||||| |||||||    
T  18962501 ctgtttggattgagttattcgatcttatctactgacataagttttgttagactgttttggagaacttatgaaa 18962573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 407
Target Start/End: Original strand, 20189153 - 20189201
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatc 407  Q
    ||||||||||||||||||| ||  |||||||||||||||| ||| ||||    
T  20189153 cttatcatgataagcacttatgtcataagctgcaaataagttgtgtatc 20189201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 24048691 - 24048651
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagt 127  Q
    |||||| |||||||||||||||||||||||||  |||||||    
T  24048691 tgtttgaatttacttatttgagtttatctactgacataagt 24048651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 24363518 - 24363558
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataag 126  Q
    |||||||||||   |||||||||||||||||||||||||||    
T  24363518 ctgtttggattgttttatttgagtttatctactagcataag 24363558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 28210356 - 28210324
Alignment:
Q  383 ataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||||||||||| ||||||||||||||||    
T  28210356 ataagctgcaaataagttgtttatccaaacagg 28210324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 28691754 - 28691794
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataag 126  Q
    ||||||||||| |||||||||||||||||| ||| ||||||    
T  28691754 ctgtttggattgacttatttgagtttatctgctaacataag 28691794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 410
Target Start/End: Original strand, 33552947 - 33553007
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaa 410  Q
    |||||||  ||||||||| ||||  ||| ||| |||||||||||||||| |||||||||||    
T  33552947 acataagcgcttatcatggtaagtgcttgtgcaataagctgcaaataagttgtttatccaa 33553007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 34744097 - 34744049
Alignment:
Q  161 acaattttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||| ||| ||||||  |||||||| ||||||||||||||||    
T  34744097 acaattttcacaagcttttttcgccttatttttataagttctccaatat 34744049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 414
Target Start/End: Original strand, 38138623 - 38138679
Alignment:
Q  358 tcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    ||||||||||| |||   || |||||||||  |||||||||||||||||||||||||    
T  38138623 tcttatcatgacaagtgattgtgctataagacgcaaataagctgtttatccaaacag 38138679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 414
Target Start/End: Original strand, 39630109 - 39630141
Alignment:
Q  382 tataagctgcaaataagctgtttatccaaacag 414  Q
    |||| ||||||||||||||||||||||||||||    
T  39630109 tataggctgcaaataagctgtttatccaaacag 39630141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 40598404 - 40598440
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcat 123  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  40598404 tgtttggattgacttatttgagcttatctactagcat 40598440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 46280289 - 46280321
Alignment:
Q  177 tttttcagcttattttcataagttctccaatat 209  Q
    ||||||||| |||||||||||||||||||||||    
T  46280289 tttttcagcctattttcataagttctccaatat 46280321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 46407429 - 46407485
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||||||  |||   |||||||||||||||||||||| ||||| ||||||    
T  46407429 cttatcatgataagtgcttacactataagctgcaaataagctgtctatcctaacagg 46407485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 418
Target Start/End: Original strand, 1058184 - 1058278
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||| ||| |||||||||| | |||||||  ||||||||  ||||| ||| |||||||||||||||||||||||||||| |||||||||||    
T  1058184 tataaaaatagcttatgtaagcttatacataagcgcttatcatagtaagcgcttgtgctataagctgcaaataagctgtttattcaaacaggccc 1058278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 14956406 - 14956499
Alignment:
Q  325 ataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||| ||| |||| ||||| | |||||||  |||||||||||||||  || |||||||||||||||||||| |||||||||||||| ||||    
T  14956406 ataaaaatagcttatgcaagcttatacataagtgcttatcatgataagcgattgtgctataagctgcaaataagttgtttatccaaacaagccc 14956499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 415
Target Start/End: Complemental strand, 40981055 - 40980999
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  40981055 cttatcaagataagcgcttgtgctataagctgcaaataagctgtttatccaaacagg 40980999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 29819026 - 29819089
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccccaact 423  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||| ||| ||||    
T  29819026 ttatcatgataagcccttttgctataagctgcaaataagttgtttatccaaacagaccctaact 29819089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 18133795 - 18133677
Alignment:
Q  99 cttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca--------caattttcactagcctttttcagcttatt 190  Q
    ||||||| || ||||||||||| ||||||||||| | |||||| |||||| | | ||||| ||        |||||||||| ||| ||||||||||||||    
T  18133795 cttatttaagcttatctactagtataagttttgtgagactgtttgggagagcttgtgaaatcagcttataacaattttcacaagcttttttcagcttatt 18133696  T
Q  191 ttcataagttctccaatat 209  Q
    |||||||||||||||||||    
T  18133695 ttcataagttctccaatat 18133677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 100 - 209
Target Start/End: Complemental strand, 26771403 - 26771286
Alignment:
Q  100 ttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca--------caattttcactagcctttttcagcttattt 191  Q
    |||| |||| ||||||||  ||||||||||||| | |||||| |||||||| ||||||||||        |||||||||  ||||||||||| |||||||    
T  26771403 ttatctgagcttatctacgggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcctttttcaacttattt 26771304  T
Q  192 tcataagttctccaatat 209  Q
    |||||||||||| |||||    
T  26771303 tcataagttctctaatat 26771286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 413
Target Start/End: Original strand, 2833465 - 2833520
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgc-aaataagctgtttatccaaaca 413  Q
    ||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  2833465 cttatcatgataagcacttatgctataagctgcaaaataagcagtttatccaaaca 2833520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 98 - 209
Target Start/End: Original strand, 35534543 - 35534662
Alignment:
Q  98 acttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaac--------acaattttcactagcctttttcagcttat 189  Q
    ||||||||||| |||||||||| |||||||||||| | |||||| | |||||| | |||||||        |||||||| || ||| |||||| |||||     
T  35534543 acttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatgacaattttaacaagcttttttcggcttac 35534642  T
Q  190 tttcataagttctccaatat 209  Q
    ||||||||||||||||||||    
T  35534643 tttcataagttctccaatat 35534662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 86 - 209
Target Start/End: Original strand, 43045643 - 43045774
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaac--------acaattttcactagcct 177  Q
    |||||||||||  ||||||| || ||||||||||||||||| ||||| | ||||||  ||||| | |||||||||        |||||||| |  ||| |    
T  43045643 ctgtttggattggcttatttaagcttatctactagcataagatttgtgagactgttttggagatcttatgaaaacagcttacaacaattttaataagctt 43045742  T
Q  178 ttttcagcttattttcataagttctccaatat 209  Q
    |||||| |||||||||||||||||||||||||    
T  43045743 ttttcaacttattttcataagttctccaatat 43045774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 42893402 - 42893483
Alignment:
Q  80 tgggcgctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||| ||||||||||| ||||||||||||||||||||  |||||| ||||||  || |||| |||||||| ||| ||||||    
T  42893402 tgggctctgtttggattaacttatttgagtttatctaccggcataatttttgtgctagtgtttgggagaacttataaaaaca 42893483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 2840294 - 2840239
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgc-aaataagctgtttatccaaaca 413  Q
    ||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||||    
T  2840294 cttatcatgataagcacttatgctataagctgcaaaataagttgtttatacaaaca 2840239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 2844981 - 2844926
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgc-aaataagctgtttatccaaaca 413  Q
    ||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||||    
T  2844981 cttatcatgataagcacttatgctataagctgcaaaataagttgtttatacaaaca 2844926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 415
Target Start/End: Complemental strand, 4389873 - 4389822
Alignment:
Q  365 atgataagcacttctgctataagctgc-aaataagctgtttatccaaacagg 415  Q
    ||||||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  4389873 atgataagcacttctgctataagctgcaaaataagttatttatccaaacagg 4389822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 418
Target Start/End: Original strand, 35534774 - 35534813
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  35534774 tgctataagctgcaaataagctgtttttccaaacaggccc 35534813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 418
Target Start/End: Complemental strand, 41821517 - 41821425
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||| |||||| || | ||||| | |||||||  ||||||||||||||||||| |||  |||||||||||||||||||| |  |||||||||||    
T  41821517 tataataacagcgtacgcaagcttatacataagtgcttatcatgataagcacttgtgc--taagctgcaaataagctgttaagtcaaacaggccc 41821425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 410
Target Start/End: Original strand, 9130456 - 9130506
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatccaa 410  Q
    |||||||||| | ||||| |||||||||||||||||||||| |||||||||    
T  9130456 ttatcatgatgaccacttgtgctataagctgcaaataagctatttatccaa 9130506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 418
Target Start/End: Complemental strand, 28763333 - 28763239
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||| ||||||||  |||  | ||||||  |||||||||||||||   || ||||||||| | |||||||||||||||| |||||||||||    
T  28763333 tataaaaatagcctatgccagcatatacataaattcttatcatgataagtgtttatgctataagttacaaataagctgtttatacaaacaggccc 28763239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 414
Target Start/End: Original strand, 36963491 - 36963545
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    |||||||||||||| ||| |||||||||||||||||||  |||||| ||||||||    
T  36963491 ttatcatgataagcgcttgtgctataagctgcaaataaattgtttacccaaacag 36963545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 14280338 - 14280383
Alignment:
Q  85 gctgtttggatttacttatttgagtttatctactagcataagtttt 130  Q
    |||||||||||| |||||||||| |||||||||| |||||||||||    
T  14280338 gctgtttggattgacttatttgattttatctactggcataagtttt 14280383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 414
Target Start/End: Original strand, 37353374 - 37353439
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaat-aagctgtttatccaaacag 414  Q
    |||||||  |||||||| ||||||| || ||||||||||||||||| ||| |||||||||||||||    
T  37353374 acataagcgcttatcatcataagcatttatgctataagctgcaaatcaagttgtttatccaaacag 37353439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 421
Target Start/End: Complemental strand, 11861726 - 11861686
Alignment:
Q  381 ctataagctgcaaataagctgtttatccaaacaggccccaa 421  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  11861726 ctataagctgcaaataagcagtttatccaaataggccccaa 11861686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 31891963 - 31891923
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataag 126  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  31891963 ctgtttggattaatttatttgagtttatctactagcataag 31891923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 415
Target Start/End: Complemental strand, 34236097 - 34236041
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||||| |  || || ||||||||||||||||| ||||||||||||||||    
T  34236097 cttatcatgataaccgtttgtgttataagctgcaaataagttgtttatccaaacagg 34236041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 36963272 - 36963336
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaac 150  Q
    |||||||||||  |||||||||| | ||||||| ||||||||||||| | |||||| ||||||||    
T  36963272 ctgtttggattggcttatttgagctaatctactggcataagttttgtgagactgtttgggagaac 36963336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 38602479 - 38602415
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaac 150  Q
    ||||||||||| ||||||||||| |||||||||  |||||||||||| |  ||||| ||||||||    
T  38602479 ctgtttggattgacttatttgagcttatctactgacataagttttgtgaggctgtttgggagaac 38602415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 407
Target Start/End: Original strand, 40637438 - 40637486
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatc 407  Q
    ||||| ||||||||||||| |||||||||||||||||||| | ||||||    
T  40637438 cttattatgataagcacttatgctataagctgcaaataagttttttatc 40637486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 411
Target Start/End: Complemental strand, 5404551 - 5404500
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaa 411  Q
    |||||||||||||||||| | || ||| ||||||||||| ||||||||||||    
T  5404551 ttatcatgataagcacttattctttaatctgcaaataagttgtttatccaaa 5404500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 9700153 - 9700114
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataa 125  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  9700153 ctgtttggattaacttatttgagcttatctactagcataa 9700114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 410
Target Start/End: Original strand, 9956931 - 9956998
Alignment:
Q  343 agctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaa 410  Q
    ||||||||||||||    ||||||||||||  ||| ||||||||||| |||||||| |||||||||||    
T  9956931 agctcaaacataagcgtgtatcatgataagtgcttgtgctataagctacaaataagttgtttatccaa 9956998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 209
Target Start/End: Complemental strand, 10120808 - 10120777
Alignment:
Q  178 ttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||||||||||||||||||||||||    
T  10120808 ttttcagcttattttcataagttctccaatat 10120777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 16162912 - 16162873
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataa 125  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  16162912 ctgtttggattggcttatttgagtttatctactagcataa 16162873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 18133591 - 18133552
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  18133591 tgctgtaagctgcaaataagttgtttatccaaacaggccc 18133552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 407
Target Start/End: Original strand, 21119072 - 21119119
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatc 407  Q
    |||| ||||||||||||| |||||||||||||||||||| | ||||||    
T  21119072 ttattatgataagcacttatgctataagctgcaaataagttttttatc 21119119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 27493089 - 27493014
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||||||| ||||||||||| |||||| || | ||||||||||| ||| | || |||||| | ||||||||||    
T  27493089 ctgtttggattaacttatttgagcttatctgctggtataagttttgtcatattatttgggagagcttatgaaaaca 27493014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 30251372 - 30251447
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||||  |||||||||| |||||||||  ||||||||| || | |||||| |||||||| || |||||||    
T  30251372 ctgtttggattggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaaca 30251447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 1058008 - 1058122
Alignment:
Q  99 cttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaac--------acaattttcactagcctttttcagcttatt 190  Q
    |||||||||| |||||||||  |||||||||||| | |||||| |||||||| | |||||||        ||| |||||| |||  |||||| |||||||    
T  1058008 cttatttgagcttatctacttacataagttttgtgagactgtttgggagaacttttgaaaactgcttatgacatttttcattag-ttttttccgcttatt 1058106  T
Q  191 ttcataagttctccaa 206  Q
    ||||||||||||||||    
T  1058107 ttcataagttctccaa 1058122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 368 - 414
Target Start/End: Original strand, 29169030 - 29169076
Alignment:
Q  368 ataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    |||||| ||| |||||||||||||| ||||||| |||||||||||||    
T  29169030 ataagcgcttgtgctataagctgcagataagctctttatccaaacag 29169076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 414
Target Start/End: Complemental strand, 29205718 - 29205676
Alignment:
Q  372 gcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    |||||| ||||||||||||||||||| |||||||||| |||||    
T  29205718 gcacttatgctataagctgcaaataatctgtttatcccaacag 29205676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 209
Target Start/End: Original strand, 35643906 - 35644037
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca--------caattttcactagcct 177  Q
    ||||| |||||  |||||||| | ||||||||| |||||| |||||| | |||||| |||| ||| |||||||| |        |||||||||  ||| |    
T  35643906 ctgttgggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt 35644005  T
Q  178 ttttcagcttattttcataagttctccaatat 209  Q
    |||||| |||||||||||||| ||||||||||    
T  35644006 ttttcaacttattttcataagctctccaatat 35644037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 382 - 420
Target Start/End: Complemental strand, 38602271 - 38602233
Alignment:
Q  382 tataagctgcaaataagctgtttatccaaacaggcccca 420  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  38602271 tataagctgcaaataagatgtttatccaaacagtcccca 38602233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 44236741 - 44236815
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataag-ttttgttatactgttagggagaacctatgaaaa 159  Q
    |||||||||||  |||||||||||||||||||| |||||||   |||| | |||||| ||||||| |||||||||    
T  44236741 ctgtttggattaccttatttgagtttatctactggcataagcacttgtgagactgttcgggagaatctatgaaaa 44236815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 44843439 - 44843393
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgt 132  Q
    ||||||||||| ||||||| ||||||||| ||| |||||||||||||    
T  44843439 ctgtttggattgacttattggagtttatccacttgcataagttttgt 44843393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 6525956 - 6525923
Alignment:
Q  99 cttatttgagtttatctactagcataagttttgt 132  Q
    ||||||||||||||||||||| ||||||||||||    
T  6525956 cttatttgagtttatctactaacataagttttgt 6525923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 9130238 - 9130283
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgt 132  Q
    ||||||||||  |||||||||| ||||||||| |||||||||||||    
T  9130238 tgtttggattagcttatttgagcttatctactggcataagttttgt 9130283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 10727496 - 10727455
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagt 127  Q
    ||||||||||| ||||||||||||||||||||| | ||||||    
T  10727496 ctgtttggattgacttatttgagtttatctacttgtataagt 10727455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 415
Target Start/End: Complemental strand, 26215440 - 26215375
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||  |||||||| |||||| ||  |||||||||||| ||||||| ||||||| ||||||||    
T  26215440 acataagcgcttatcattataagcgctcgtgctataagctgaaaataagttgtttatacaaacagg 26215375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 40859844 - 40859885
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgc 391  Q
    |||||||  ||||||||||||||||||| |||||||||||||    
T  40859844 acataagcgcttatcatgataagcacttgtgctataagctgc 40859885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 6882044 - 6882004
Alignment:
Q  121 cataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||||| | |||||| |||||||||||||||||||    
T  6882044 cataagttttgtgagactgtttgggagaacctatgaaaaca 6882004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 7008750 - 7008710
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataag 126  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  7008750 ctgtttgaattgacttatttgagtttatctactggcataag 7008710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 9956832 - 9956860
Alignment:
Q  178 ttttcagcttattttcataagttctccaa 206  Q
    |||||||||||||||||||||||||||||    
T  9956832 ttttcagcttattttcataagttctccaa 9956860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 403
Target Start/End: Complemental strand, 10120692 - 10120648
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtt 403  Q
    |||||||||| || | ||| |||||||||||||||||||||||||    
T  10120692 cttatcatgagaaacgcttatgctataagctgcaaataagctgtt 10120648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 414
Target Start/End: Complemental strand, 12976114 - 12976086
Alignment:
Q  386 agctgcaaataagctgtttatccaaacag 414  Q
    |||||||||||||||||||||||||||||    
T  12976114 agctgcaaataagctgtttatccaaacag 12976086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 362 - 402
Target Start/End: Complemental strand, 15179074 - 15179034
Alignment:
Q  362 atcatgataagcacttctgctataagctgcaaataagctgt 402  Q
    ||||||||| |||||| ||||||||| ||||||||||||||    
T  15179074 atcatgatatgcacttgtgctataagttgcaaataagctgt 15179034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 15180691 - 15180647
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagtttt 130  Q
    |||||||||||  ||||||||||||||||||||  ||||||||||    
T  15180691 ctgtttggattggcttatttgagtttatctactgccataagtttt 15180647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 38750495 - 38750463
Alignment:
Q  100 ttatttgagtttatctactagcataagttttgt 132  Q
    ||||||||||||||||||| |||||||||||||    
T  38750495 ttatttgagtttatctacttgcataagttttgt 38750463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 43717855 - 43717927
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||||  |||||||||| ||||||| |  |||||||||||| | ||| || |||||||| ||||||||||    
T  43717855 tttggattggcttatttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaaca 43717927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 5e-20; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 350 - 420
Target Start/End: Original strand, 5894289 - 5894359
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggcccca 420  Q
    |||||||  ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  5894289 acataagcgcttatcatgataagcacttgtgctataagcttcaaataagctgtttatccaaacaggaccca 5894359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 418
Target Start/End: Complemental strand, 37473359 - 37473265
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||| ||| |||||||||| | |||||||  ||| |||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||    
T  37473359 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 37473265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 47498978 - 47499033
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  47498978 cttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 47499033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 427
Target Start/End: Original strand, 33541844 - 33541921
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccccaactcaac 427  Q
    |||||||  ||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||| |||||||| |||||    
T  33541844 acataagcgcttatcatgataaacacttgtgctataaactgcaaataagttgtttatccaaactggccccaaatcaac 33541921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 324 - 417
Target Start/End: Complemental strand, 41505647 - 41505554
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggcc 417  Q
    |||||||| ||| |||||||||  |  ||||||  |||||||| ||||||  || |||||||||||||||||||||||||||||||||||||||    
T  41505647 tataaaaatagcttatgtaagccaatgcataagcacttatcatcataagcgtttgtgctataagctgcaaataagctgtttatccaaacaggcc 41505554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 27820475 - 27820531
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  27820475 cttatcatgataagcgcttatgctataagctgcaaataagttgtttatccaaacagg 27820531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 363 - 414
Target Start/End: Original strand, 24562452 - 24562503
Alignment:
Q  363 tcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  24562452 tcatgataagcacatgtgctataagctgcaaataagctgtttatccaaacag 24562503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 323 - 418
Target Start/End: Complemental strand, 38247414 - 38247320
Alignment:
Q  323 ttataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||| |||||||| ||||| |||| | |||||||  | ||||||||||||  ||| ||||||||||||||||| ||||||||||||||||||||||    
T  38247414 ttatgaaaacagcttatgtgagcttatacataagtgcatatcatgataagtgcttgtgctataagctgcaaat-agctgtttatccaaacaggccc 38247320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 427
Target Start/End: Original strand, 33546597 - 33546663
Alignment:
Q  361 tatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccccaactcaac 427  Q
    ||||||||||| ||||| |||| |||||||| |||||||||||||||||||||||||| || |||||    
T  33546597 tatcatgataaacacttgtgctttaagctgcgaataagctgtttatccaaacaggcccaaaatcaac 33546663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 209
Target Start/End: Original strand, 37631477 - 37631608
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca--------caattttcactagcct 177  Q
    |||||||||||  |||||||||| | ||||| |||||||||||| || | || || | ||| ||| ||||||||||        |||||||||| ||| |    
T  37631477 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctt 37631576  T
Q  178 ttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||||||||||||||||||||||||    
T  37631577 ttttcagcttattttcataagttctccaatat 37631608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 50644174 - 50644248
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||| ||||||||||| |||||||||| |||| ||||||| | |||||| |||||||| ||||||||||    
T  50644174 tgtttggattgacttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaaca 50644248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 51688630 - 51688576
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    ||||||||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  51688630 cttatcatgataagcacttgtactataagctgcaaataagttgtttatccaaaca 51688576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 2295248 - 2295173
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||| |||  |||||||||| ||||||||| ||||||||||||| | |||||| |||||||| ||||||||||    
T  2295248 ctgtttgaattggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaaca 2295173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 3233933 - 3234008
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||||||| ||||||||||| ||||||| |  | |||||||||| | ||||||||||||||| ||||||||||    
T  3233933 ctgtttggattgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaaca 3234008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 6556943 - 6556889
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    ||||||||||||||||||| |||||||| || |||| ||||||||||||||||||    
T  6556943 cttatcatgataagcacttgtgctataaactacaaagaagctgtttatccaaaca 6556889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 337 - 415
Target Start/End: Complemental strand, 14331736 - 14331658
Alignment:
Q  337 tatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||| |||| | |||||||  |||||||||| |||| ||| ||||||||||| ||||||||||||||||| |||||||    
T  14331736 tatgttagcttatacataagtgcttatcatgagaagcgcttgtgctataagcttcaaataagctgtttatctaaacagg 14331658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 360 - 418
Target Start/End: Original strand, 41195340 - 41195398
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||| ||||||| ||| |||||||||||||||||||| | |||||||||||||||||    
T  41195340 ttatcaggataagcgcttgtgctataagctgcaaataagttatttatccaaacaggccc 41195398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 412
Target Start/End: Original strand, 27146383 - 27146436
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaac 412  Q
    |||||||||||| | |||| |||||||||||||||||||||| |||||||||||    
T  27146383 cttatcatgatatgtacttatgctataagctgcaaataagctatttatccaaac 27146436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 412
Target Start/End: Complemental strand, 30191916 - 30191863
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaac 412  Q
    |||||||| |||||||||||||||||||| || ||||||||| |||||||||||    
T  30191916 cttatcataataagcacttctgctataagttgtaaataagctatttatccaaac 30191863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 424
Target Start/End: Original strand, 34795569 - 34795614
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacaggccccaactc 424  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||    
T  34795569 tgctataagatgcaaataagctgtttatccaaacaggccctaactc 34795614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 36514606 - 36514667
Alignment:
Q  98 acttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaa 159  Q
    |||||||||||||||||||||  |||||||||| | | ||||||||||||||| ||||||||    
T  36514606 acttatttgagtttatctactgccataagttttttgagactgttagggagaacttatgaaaa 36514667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 1510454 - 1510510
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||| ||||||| ||| ||||||||| | |||||||||||||||||||||||||    
T  1510454 cttatcaagataagcgcttgtgctataagatacaaataagctgtttatccaaacagg 1510510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 5721074 - 5721002
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||||  |||||||||| ||| ||||| ||||||||||||||  |||||| |||||||| ||||||||||    
T  5721074 tttggattggcttatttgagcttaactacttgcataagttttgttggactgtttgggagaacttatgaaaaca 5721002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 427
Target Start/End: Complemental strand, 5741623 - 5741519
Alignment:
Q  323 ttataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccccaac 422  Q
    ||||||||| ||| ||||||| || | |||||||  |||||||||||| |  ||| ||||||||||  |||||||| | ||||||||||||||||| ||     
T  5741623 ttataaaaatagcttatgtaaacttatacataagcgcttatcatgataggtgcttgtgctataagccacaaataagatatttatccaaacaggcccaaaa 5741524  T
Q  423 tcaac 427  Q
    |||||    
T  5741523 tcaac 5741519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 5741755 - 5741683
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||||  |||||||||| ||| ||||| ||||||||||||||  |||||| |||||||| ||||||||||    
T  5741755 tttggattggcttatttgagcttaactacttgcataagttttgttgaactgtttgggagaacttatgaaaaca 5741683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 418
Target Start/End: Original strand, 14576798 - 14576857
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||||||||||  ||| |||||||||||| ||||||| ||||||||| |||||||||    
T  14576798 cttatcatgataagagcttgtgctataagctggaaataagatgtttatcccaacaggccc 14576857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 418
Target Start/End: Complemental strand, 22344021 - 22343954
Alignment:
Q  351 cataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||| |||||||||||||||| ||| |||  |||| |||||||||| || ||||||||||||||||    
T  22344021 cataagctcttatcatgataagcgcttgtgcggtaagttgcaaataagttgattatccaaacaggccc 22343954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 209
Target Start/End: Complemental strand, 49938892 - 49938768
Alignment:
Q  93 gatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca--------caattttcactagcctttttcag 184  Q
    |||| |||||||||||||||| |  | ||||||||||||| | | |||| |||||||| ||||||||||        |||||||||  ||| |||||||     
T  49938892 gattgacttatttgagtttatatcgtggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttttcaa 49938793  T
Q  185 cttattttcataagttctccaatat 209  Q
    ||||||||||||||||||| |||||    
T  49938792 cttattttcataagttctctaatat 49938768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 413
Target Start/End: Original strand, 4920894 - 4920940
Alignment:
Q  368 ataagcacttctgctataagctgcaaa-taagctgtttatccaaaca 413  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||    
T  4920894 ataagcacttatgctataagctgcaaattaagctgtttatccaaaca 4920940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 17603525 - 17603575
Alignment:
Q  368 ataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||| ||| ||||||||||| ||||||||| ||||||||||||||||||    
T  17603525 ataagcgcttgtgctataagctacaaataagccgtttatccaaacaggccc 17603575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 29904890 - 29904779
Alignment:
Q  99 cttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca--------caattttcactagcctttttcagcttatt 190  Q
    |||||||||| ||||||||| ||||||||||||| | |||||| | |||||| ||| ||||||        |||||||||  ||| ||||||| ||||||    
T  29904890 cttatttgagcttatctacttgcataagttttgtgagactgtttgagagaacttataaaaacagcttatggcaattttcaaaagcttttttcaccttatt 29904791  T
Q  191 ttcataagttct 202  Q
    ||||||||||||    
T  29904790 ttcataagttct 29904779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 30013997 - 30014035
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcata 124  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  30013997 ctgtttggattgacttatttgagtttatctactagcata 30014035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 30581737 - 30581683
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||||| ||| |||| | ||||||||||||||||| |||||||||||||||    
T  30581737 cttatcatgaaaagtacttgttctataagctgcaaataaactgtttatccaaaca 30581683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 38001734 - 38001672
Alignment:
Q  99 cttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||||||||| |||  |||||||||||| | |||||| |||||||| ||||||||||    
T  38001734 cttatttgagtttatcaactgacataagttttgtgagactgtttgggagaacttatgaaaaca 38001672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 49938664 - 49938614
Alignment:
Q  368 ataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||| ||| |||||||||||||| ||||||| |||||||||||||||||    
T  49938664 ataagcgcttgtgctataagctgcagataagctttttatccaaacaggccc 49938614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 473101 - 473036
Alignment:
Q  349 aacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    ||||||||  |||| |||||||||| ||| || | ||||||||||||||| |||||||||||||||    
T  473101 aacataagcgcttaccatgataagcgcttttgttgtaagctgcaaataagttgtttatccaaacag 473036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 413
Target Start/End: Complemental strand, 8081825 - 8081769
Alignment:
Q  357 atcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||||    
T  8081825 atcttatcatgataatcacttaatctataagctgcagataagttgtttatccaaaca 8081769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 411
Target Start/End: Original strand, 24417817 - 24417869
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaa-taagctgtttatccaaa 411  Q
    |||||||||||||||||| || ||||||||||||| ||| |||||||||||||    
T  24417817 ttatcatgataagcacttgtgttataagctgcaaattaacctgtttatccaaa 24417869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 411
Target Start/End: Original strand, 27970424 - 27970460
Alignment:
Q  375 cttctgctataagctgcaaataagctgtttatccaaa 411  Q
    |||||||||||||||||||||||| ||||||||||||    
T  27970424 cttctgctataagctgcaaataagttgtttatccaaa 27970460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 29045852 - 29045888
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcat 123  Q
    |||||||||| ||||||||||||||||||||||||||    
T  29045852 tgtttggattgacttatttgagtttatctactagcat 29045888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 473233 - 473186
Alignment:
Q  161 acaattttcactagcctttttcagcttattttcataagttctccaata 208  Q
    ||||||||||  ||| ||||||| ||||||||||||||||||||||||    
T  473233 acaattttcataagcttttttcaacttattttcataagttctccaata 473186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 209
Target Start/End: Complemental strand, 10809397 - 10809366
Alignment:
Q  178 ttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||||||||||||||||||||||||    
T  10809397 ttttcagcttattttcataagttctccaatat 10809366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 418
Target Start/End: Original strand, 17727240 - 17727299
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||| |||||||  ||| ||||||||||| || ||||| |||||||||||||||||||    
T  17727240 cttatcttgataagtgcttgtgctataagctacacataagttgtttatccaaacaggccc 17727299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 414
Target Start/End: Original strand, 34619506 - 34619553
Alignment:
Q  368 ataagcacttctgctataagctgcaaa-taagctgtttatccaaacag 414  Q
    ||||||| || |||||||||||||||| ||||||||||||||||||||    
T  34619506 ataagcaattatgctataagctgcaaattaagctgtttatccaaacag 34619553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 415
Target Start/End: Original strand, 35058893 - 35058948
Alignment:
Q  361 tatcatgataagcacttctgctataagctgcaaa-taagctgtttatccaaacagg 415  Q
    ||||||||||||  ||| ||||||||| |||||| |||||||||||||||||||||    
T  35058893 tatcatgataagtgcttatgctataagttgcaaaataagctgtttatccaaacagg 35058948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 38247479 - 38247404
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||||   ||||||||  ||||||||| |||||||||||||   |||||| |||||||| ||||||||||    
T  38247479 ctgtttggattgggttatttgaacttatctactggcataagttttgtgtcactgtttgggagaacttatgaaaaca 38247404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 39976130 - 39976201
Alignment:
Q  88 gtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaa 159  Q
    ||||||| | ||||||||||| |||||||||  |||||||||||| | |||||| | |||||| ||||||||    
T  39976130 gtttggactgacttatttgagattatctactgacataagttttgtgaaactgtttgagagaacttatgaaaa 39976201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 33204324 - 33204382
Alignment:
Q  98 acttatttgagtttatctactagcataagttttgttatactgttagggagaacctatga 156  Q
    ||||||||||| |||||||||  |||||||||||| | |||||| |||||||| |||||    
T  33204324 acttatttgagcttatctactgacataagttttgtgagactgtttgggagaacttatga 33204382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 37617384 - 37617458
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||| ||||||||||||||||||| |  | |||||||||| | |||||| | |||||  ||||||||||    
T  37617384 tgtttggattgacttatttgagtttatctattgccgtaagttttgtgagactgtttgcgagaatttatgaaaaca 37617458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 38116189 - 38116251
Alignment:
Q  99 cttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||| ||||||||||||||| ||||||| | ||| || | |||||||||| ||||||    
T  38116189 cttatttgagcttatctactagcataggttttgtgagactatttgagagaacctatcaaaaca 38116251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 43230894 - 43230948
Alignment:
Q  364 catgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||| ||||||| ||||||||||| |||| ||  |||||||||||||||||||    
T  43230894 catgatgagcacttgtgctataagctccaaacaatttgtttatccaaacaggccc 43230948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 421
Target Start/End: Original strand, 45661260 - 45661302
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacaggccccaa 421  Q
    |||| |||||||||||||| |||||||||| ||||||||||||    
T  45661260 tgctctaagctgcaaataatctgtttatcccaacaggccccaa 45661302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 47432162 - 47432116
Alignment:
Q  163 aattttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    ||||||||| ||| ||||||||||||||||||||| |||| ||||||    
T  47432162 aattttcacaagcttttttcagcttattttcataaattcttcaatat 47432116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 411
Target Start/End: Original strand, 51695631 - 51695681
Alignment:
Q  361 tatcatgataagcacttctgctataagctgcaaataagctgtttatccaaa 411  Q
    |||||| |||||  |||||||| |||||||||| |||||||||||||||||    
T  51695631 tatcataataagtgcttctgctgtaagctgcaattaagctgtttatccaaa 51695681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 2777949 - 2777916
Alignment:
Q  173 agcctttttcagcttattttcataagttctccaa 206  Q
    |||| |||||||||||||||||||||||||||||    
T  2777949 agccgttttcagcttattttcataagttctccaa 2777916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 9572246 - 9572299
Alignment:
Q  362 atcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||| |||||| |||||||||||||||||||| | || || ||||||||    
T  9572246 atcatgataggcacttgtgctataagctgcaaataagttattcattcaaacagg 9572299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 207
Target Start/End: Complemental strand, 10799514 - 10799485
Alignment:
Q  178 ttttcagcttattttcataagttctccaat 207  Q
    ||||||||||||||||||||||||||||||    
T  10799514 ttttcagcttattttcataagttctccaat 10799485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 392
Target Start/End: Complemental strand, 27976405 - 27976372
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgca 392  Q
    ||||||||||||||||||| ||||||||||||||    
T  27976405 cttatcatgataagcacttgtgctataagctgca 27976372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 118
Target Start/End: Complemental strand, 30257833 - 30257804
Alignment:
Q  89 tttggatttacttatttgagtttatctact 118  Q
    ||||||||||||||||||||||||||||||    
T  30257833 tttggatttacttatttgagtttatctact 30257804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 41195210 - 41195239
Alignment:
Q  177 tttttcagcttattttcataagttctccaa 206  Q
    ||||||||||||||||||||||||||||||    
T  41195210 tttttcagcttattttcataagttctccaa 41195239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 415
Target Start/End: Complemental strand, 45975634 - 45975569
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||  ||||||||||||||   || || |||||||| |||||||||| ||||||||||||||    
T  45975634 acataagggcttatcatgataagtgtttgtgttataagctacaaataagctatttatccaaacagg 45975569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 427
Target Start/End: Complemental strand, 5720942 - 5720838
Alignment:
Q  323 ttataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccccaac 422  Q
    ||||||||| ||| || |||| || | |||||||  |||||||||||| |  ||| || |||||||  |||||||| | ||||||||||||||||| ||     
T  5720942 ttataaaaatagcttacgtaaacttatacataagcgcttatcatgataggtgcttgtgttataagccacaaataagatatttatccaaacaggcccaaaa 5720843  T
Q  423 tcaac 427  Q
    |||||    
T  5720842 tcaac 5720838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 411
Target Start/End: Complemental strand, 7069215 - 7069183
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaa 411  Q
    |||||||||||| ||||||||||||||||||||    
T  7069215 tgctataagctggaaataagctgtttatccaaa 7069183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 7137016 - 7137044
Alignment:
Q  178 ttttcagcttattttcataagttctccaa 206  Q
    |||||||||||||||||||||||||||||    
T  7137016 ttttcagcttattttcataagttctccaa 7137044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 413
Target Start/End: Complemental strand, 8382653 - 8382621
Alignment:
Q  381 ctataagctgcaaataagctgtttatccaaaca 413  Q
    ||||||||||||||||||||||||||| |||||    
T  8382653 ctataagctgcaaataagctgtttatctaaaca 8382621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 363 - 414
Target Start/End: Complemental strand, 10666014 - 10665960
Alignment:
Q  363 tcatgataagcacttctgctataagctgc---aaataagctgtttatccaaacag 414  Q
    |||||||||||| || |||||||||||||   ||||||| |||||||||||||||    
T  10666014 tcatgataagcatttgtgctataagctgctgtaaataagttgtttatccaaacag 10665960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 15477634 - 15477586
Alignment:
Q  161 acaattttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||  ||| ||||||||||||| ||||||||||||| |||||    
T  15477634 acaattttcaaaagcttttttcagcttatattcataagttctctaatat 15477586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 28467584 - 28467548
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcat 123  Q
    |||||||||| |||||||||||||||| |||||||||    
T  28467584 tgtttggattgacttatttgagtttatttactagcat 28467548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 29904693 - 29904633
Alignment:
Q  351 cataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaa 411  Q
    |||||| | |||||||||||||| |||   |||||||||||| ||||| ||||||||||||    
T  29904693 cataagcttttatcatgataagcgcttgaactataagctgcatataagttgtttatccaaa 29904633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 31517872 - 31517928
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaa-taagctgtttatccaaacag 414  Q
    |||||||||||||   ||| |||||||||||||||| |||||| |||||||||||||    
T  31517872 cttatcatgataaatgcttatgctataagctgcaaattaagctatttatccaaacag 31517928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 415
Target Start/End: Original strand, 33527275 - 33527323
Alignment:
Q  368 ataagcacttctgctataagctgcaaa-taagctgtttatccaaacagg 415  Q
    |||||| ||| |||| ||||||||||| |||||||||||||||||||||    
T  33527275 ataagcgcttatgctctaagctgcaaaataagctgtttatccaaacagg 33527323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 38503483 - 38503511
Alignment:
Q  178 ttttcagcttattttcataagttctccaa 206  Q
    |||||||||||||||||||||||||||||    
T  38503483 ttttcagcttattttcataagttctccaa 38503511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 42575389 - 42575433
Alignment:
Q  88 gtttggatttacttatttgagtttatctactagcataagttttgt 132  Q
    |||||||||  |||||||||| |||||||||||||||| ||||||    
T  42575389 gtttggattgccttatttgagcttatctactagcataaattttgt 42575433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 415
Target Start/End: Complemental strand, 45855766 - 45855730
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||||||||||||||| || |||||||||||||    
T  45855766 tgctataagctgcaaataagttggttatccaaacagg 45855730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 362 - 413
Target Start/End: Complemental strand, 48064241 - 48064189
Alignment:
Q  362 atcatgataagcacttctgctataagctgcaaa-taagctgtttatccaaaca 413  Q
    |||||||||||  ||| |||||||||||||||| |||| ||||||||||||||    
T  48064241 atcatgataagggcttatgctataagctgcaaattaagttgtttatccaaaca 48064189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 415
Target Start/End: Complemental strand, 51190762 - 51190726
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  51190762 tgctataagctacaaataagttgtttatccaaacagg 51190726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 51929540 - 51929588
Alignment:
Q  161 acaattttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||  ||| ||||||| ||||||| |||||||||||||||||    
T  51929540 acaattttcataagcttttttcaacttatttccataagttctccaatat 51929588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 87 - 209
Target Start/End: Complemental strand, 20880627 - 20880497
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaac--------acaattttcactagcctt 178  Q
    ||||||||||  |||||||||| ||||||||| ||||||||||  ||| ||| || ||||||||||||||||||        ||||||||||  ||| ||    
T  20880627 tgtttggattggcttatttgagcttatctacttgcataagtttccttagactatttgggagaacctatgaaaacagcttatgacaattttcataagcttt 20880528  T
Q  179 tttcagcttattttcataagttctccaatat 209  Q
    ||| |||||||||||||||||||||||||||    
T  20880527 tttgagcttattttcataagttctccaatat 20880497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 413
Target Start/End: Original strand, 30956771 - 30956825
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  30956771 cttatcatgataagcccttgtgctataagctgcaaataagctgtttatccaaaca 30956825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 413
Target Start/End: Original strand, 30972583 - 30972637
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  30972583 cttatcatgataagcccttgtgctataagctgcaaataagctgtttatccaaaca 30972637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 415
Target Start/End: Original strand, 31365395 - 31365473
Alignment:
Q  337 tatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||| ||||| | |||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||    
T  31365395 tatgcaagcttatacataagtgcttatcatgataatcacttgtgctataagctgcaaataagctgtttatccacacagg 31365473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 418
Target Start/End: Original strand, 35959566 - 35959660
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||| ||| ||| ||||| |||| | ||||||| |||||||||||||||  ||| || |||||||||||||||||||||||||||||||| ||||    
T  35959566 tatagaaatagcttatgtgagcttatacataagctcttatcatgataagagcttgtgatataagctgcaaataagctgtttatccaaacaagccc 35959660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 46886835 - 46886888
Alignment:
Q  362 atcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  46886835 atcatgataagcacttatgctataagctgcaaataagttgtttatccaaacagg 46886888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 337 - 412
Target Start/End: Original strand, 1508704 - 1508779
Alignment:
Q  337 tatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaac 412  Q
    |||| ||||| | |||||||  ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||    
T  1508704 tatgcaagcttatacataagcgcttatcatgataagcacttgtgctataagttgcaaataagctgtttttccaaac 1508779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 418
Target Start/End: Complemental strand, 20880437 - 20880343
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||| ||| |||||||||| | |||||||  ||||| ||||||| | ||| |||||||| ||||||||||| ||| |||||||||||||||    
T  20880437 tataaaaatagcttatgtaagcttatacataagcacttattatgataaccgcttgtgctataaactgcaaataagttgtctatccaaacaggccc 20880343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 21367816 - 21367691
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaac--------acaattttcactagcctttt 180  Q
    ||||||||  |||||||||| |||||||| ||||||||||||||   |||||| |||||||| |||||||||        ||| | ||||| |||  |||    
T  21367816 tttggattggcttatttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgttt 21367717  T
Q  181 tcagcttattttcataagttctccaa 206  Q
    ||||||||||||||||||||||||||    
T  21367716 tcagcttattttcataagttctccaa 21367691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 30443962 - 30443914
Alignment:
Q  161 acaattttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  30443962 acaattttcacaagcttttttcagcttattttcataagttctccaatat 30443914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 418
Target Start/End: Original strand, 42800058 - 42800117
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||| ||||    
T  42800058 cttaacatgataagcgcttctgctataagctacaaataagctgttaatccaaacatgccc 42800117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 584196 - 584123
Alignment:
Q  88 gtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||||| ||||||||||| ||||||||||||||||||| ||| | ||||||  ||||||  ||||||||||    
T  584196 gtttggattgacttatttgagcttatctactagcataagttctgtgagactgttttggagaatttatgaaaaca 584123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 944419 - 944358
Alignment:
Q  359 cttatcatgataagcacttc-tgctataagctgcaaataagctgtttatccaaacaggcccc 419  Q
    |||||||||||||||||||  || ||||||||||||||||| ||||||||||||||| ||||    
T  944419 cttatcatgataagcacttagtgttataagctgcaaataagttgtttatccaaacagacccc 944358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 32582888 - 32582817
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||| |||||||||||||||||||||| ||||||||   ||| |||||| ||||||||  |||||||||    
T  32582888 tgtttggattgacttatttgagtttatctactaccataagtt---ttagactgtttgggagaactcatgaaaaca 32582817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 411
Target Start/End: Complemental strand, 39442373 - 39442321
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaa 411  Q
    |||||||| ||||||||||  || |||||||||||||||||||||||||||||    
T  39442373 cttatcataataagcacttaagccataagctgcaaataagctgtttatccaaa 39442321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 402460 - 402535
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||| || || |||||||||||||| |||| |||||||||||  | |||||| |||||||| ||||||||||    
T  402460 ctgtttgggttgacctatttgagtttatcaactaacataagttttgcaagactgtttgggagaacgtatgaaaaca 402535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 413
Target Start/End: Original strand, 402667 - 402730
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||  ||||||||||||||||||| |||||| ||||||||||||| ||||| | ||||||    
T  402667 acataagcccttatcatgataagcacttgtgctatgagctgcaaataagttgtttgttcaaaca 402730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 25447163 - 25447218
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgtt 141  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||| | ||||||    
T  25447163 ctgtttggattgacttatttgagtttatctactgacataagttttgtgagactgtt 25447218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 418
Target Start/End: Complemental strand, 34034096 - 34034037
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||||||||||| | | | |||||||||| ||||||| |||||||||||||||||||    
T  34034096 cttatcatgataagcgcctgttctataagctgaaaataagttgtttatccaaacaggccc 34034037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 413
Target Start/End: Original strand, 34235202 - 34235265
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||  ||||||||||||||||| | | ||||||||| |||||||| ||||||||||||||    
T  34235202 acataagtgcttatcatgataagcacatgtactataagctacaaataagttgtttatccaaaca 34235265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 39980881 - 39980806
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||||  ||| |||||| ||||||||||||||||||||||| | ||||||   |||||| ||||||||||    
T  39980881 ctgtttggattggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaaca 39980806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 209
Target Start/End: Complemental strand, 43062759 - 43062712
Alignment:
Q  162 caattttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    |||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  43062759 caattttcacaagcttttttcagcttcttttcataagttctccaatat 43062712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 412
Target Start/End: Complemental strand, 2719394 - 2719341
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaac 412  Q
    |||||||||||||||  || |||||||||||| ||||||||||||||| |||||    
T  2719394 cttatcatgataagcgtttgtgctataagctgtaaataagctgtttattcaaac 2719341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 413
Target Start/End: Original strand, 20003430 - 20003483
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||||||||||||  ||||||||||| |||||||| ||||| ||||||||    
T  20003430 ttatcatgataagcactcgtgctataagctacaaataagttgtttctccaaaca 20003483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 424
Target Start/End: Original strand, 24684968 - 24685033
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccccaactc 424  Q
    ||||||||||| || | || ||||||||||||||||||| | || ||||||||||||||| |||||    
T  24684968 cttatcatgatgagaatttgtgctataagctgcaaataaaccgtctatccaaacaggccctaactc 24685033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 415
Target Start/End: Complemental strand, 849587 - 849551
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||||||||||||||| ||||||||||||||||    
T  849587 tgctataagctgcaaataagttgtttatccaaacagg 849551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 3846046 - 3846082
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||| |||||||||||||||||||||||||    
T  3846046 tgctataagctacaaataagctgtttatccaaacagg 3846082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 416
Target Start/End: Original strand, 10704713 - 10704745
Alignment:
Q  384 taagctgcaaataagctgtttatccaaacaggc 416  Q
    |||||||||||||||||||||||||||||||||    
T  10704713 taagctgcaaataagctgtttatccaaacaggc 10704745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 406
Target Start/End: Complemental strand, 23815997 - 23815941
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttat 406  Q
    |||||||  |||||||||||||||||||  |||||||| ||||||||||| ||||||    
T  23815997 acataagtgcttatcatgataagcactttggctataagatgcaaataagcagtttat 23815941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 407
Target Start/End: Complemental strand, 28240261 - 28240213
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatc 407  Q
    ||||||||||||||| ||| |||||||||||||| ||||| ||||||||    
T  28240261 cttatcatgataagcgcttgtgctataagctgcagataagttgtttatc 28240213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 415
Target Start/End: Complemental strand, 31403293 - 31403237
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||| |||||||||||||  |||| || |||||||||| |||||||||||||||||    
T  31403293 cttatgatgataagcacttgggctagaaactgcaaataacctgtttatccaaacagg 31403237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 415
Target Start/End: Complemental strand, 38902001 - 38901965
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||| |||||||||||||||||||||||||||    
T  38902001 tgctataagttgcaaataagctgtttatccaaacagg 38901965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 42747916 - 42747952
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||| |||||||||||||||||||||||||||    
T  42747916 tgctataagttgcaaataagctgtttatccaaacagg 42747952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 415
Target Start/End: Complemental strand, 47132302 - 47132246
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||||||  ||| ||||||||| || ||||||| ||||||||||||||||    
T  47132302 cttatcatgataagtgcttgtgctataaggtgaaaataagttgtttatccaaacagg 47132246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 130
Target Start/End: Original strand, 24684741 - 24684784
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagtttt 130  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||    
T  24684741 tgtttggattaacttatttgagcttatctactggcataagtttt 24684784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 31365119 - 31365178
Alignment:
Q  99 cttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaa 158  Q
    |||||||||| ||||||| | ||||||||||||| | |||||| |||||||| |||||||    
T  31365119 cttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaa 31365178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 411
Target Start/End: Original strand, 34610942 - 34610993
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaa 411  Q
    |||||||||||||| ||| || ||||||||||| ||||| ||||||||||||    
T  34610942 ttatcatgataagcgcttgtgttataagctgcagataagttgtttatccaaa 34610993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 413
Target Start/End: Original strand, 35328289 - 35328351
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||  |||||||| |||||| ||| | |||||||||||||||||||| ||||||||||||    
T  35328289 acataagtgcttatcataataagcgcttgt-ctataagctgcaaataagctatttatccaaaca 35328351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 42747700 - 42747775
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||| || |||||||||||||||||||||  ||||||| |||| | ||||||   |||||| ||||||||||    
T  42747700 ctgtttggtttgacttatttgagtttatctacttccataagtattgtgagactgtttttgagaacttatgaaaaca 42747775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 44014716 - 44014755
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataa 125  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  44014716 ctgtttggattggcttatttgagtttatctactagcataa 44014755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 209
Target Start/End: Original strand, 50600196 - 50600227
Alignment:
Q  178 ttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||||||||||||||||||||||||    
T  50600196 ttttcagcttattttcataagttctccaatat 50600227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 415
Target Start/End: Original strand, 53789571 - 53789662
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||| ||| ||| |||||||||| | |||||||  ||||||||||||||| ||| ||  ||||||||||| ||||  ||||| |||||||||    
T  53789571 tatagaaatagcttatgtaagcttacacataagtgcttatcatgataagcgcttgtggcataagctgcaattaagtcgtttacccaaacagg 53789662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 31365240 - 31365298
Alignment:
Q  99 cttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaa 157  Q
    |||||||||||||||||| | |||||| |||||| | |||||| |||||||| ||||||    
T  31365240 cttatttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaa 31365298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 3845579 - 3845608
Alignment:
Q  177 tttttcagcttattttcataagttctccaa 206  Q
    ||||||||||||||||||||||||||||||    
T  3845579 tttttcagcttattttcataagttctccaa 3845608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 414
Target Start/End: Original strand, 18405985 - 18406018
Alignment:
Q  381 ctataagctgcaaataagctgtttatccaaacag 414  Q
    ||||||| ||||||||||||||||||||||||||    
T  18405985 ctataagttgcaaataagctgtttatccaaacag 18406018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 24085258 - 24085331
Alignment:
Q  88 gtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||  |||||||||| ||||||||  ||||||||||||| | |||| |  ||||||| ||||||||||    
T  24085258 gtttggattggcttatttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaaca 24085331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 26911740 - 26911699
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcataagtttt 130  Q
    |||||||| |||||||||||||||||||||  ||||||||||    
T  26911740 tttggattgacttatttgagtttatctactgacataagtttt 26911699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 390
Target Start/End: Complemental strand, 30443711 - 30443658
Alignment:
Q  337 tatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctg 390  Q
    ||||||||||||  |||||   ||||||||||||||||||| ||||||||||||    
T  30443711 tatgtaagctcatgcataattgcttatcatgataagcacttgtgctataagctg 30443658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 33405114 - 33405155
Alignment:
Q  90 ttggatttacttatttgagtttatctactagcataagttttg 131  Q
    ||||||| |||||||||||||||||||||  |||||||||||    
T  33405114 ttggattgacttatttgagtttatctactgacataagttttg 33405155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 36631055 - 36631100
Alignment:
Q  164 attttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    |||||||  ||| |||||| ||||||||||||||||||||||||||    
T  36631055 attttcaaaagcttttttctgcttattttcataagttctccaatat 36631100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 409
Target Start/End: Original strand, 47249604 - 47249653
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatcca 409  Q
    |||||||||||||  ||| || ||||||||||||||||||| ||||||||    
T  47249604 ttatcatgataagtgcttgtgttataagctgcaaataagctatttatcca 47249653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 901977 - 901945
Alignment:
Q  177 tttttcagcttattttcataagttctccaatat 209  Q
    ||||||| |||||||||||||||||||||||||    
T  901977 tttttcaacttattttcataagttctccaatat 901945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 395
Target Start/End: Complemental strand, 5435767 - 5435731
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaat 395  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  5435767 cttatcatgataagcacttatgctataagctgtaaat 5435731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 11253653 - 11253613
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataag 126  Q
    ||||||| ||| ||||||||||| |||||||||||||||||    
T  11253653 ctgtttgaattgacttatttgagattatctactagcataag 11253613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 407
Target Start/End: Complemental strand, 12833919 - 12833871
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatc 407  Q
    ||||| ||||||||||||| |||||||||||||| ||||| | ||||||    
T  12833919 cttattatgataagcacttatgctataagctgcatataagttttttatc 12833871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 16072959 - 16073011
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatact 138  Q
    ||||||||||| ||||||||||| ||||||| |  |||||||||||| |||||    
T  16072959 ctgtttggattgacttatttgagcttatctaatgacataagttttgtgatact 16073011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 418
Target Start/End: Complemental strand, 20170457 - 20170389
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||  |||||||||| ||||| || || ||||| ||||||||||| ||||| ||| |||||||||    
T  20170457 acataagcgcttatcatgaaaagcagttgtgatataaactgcaaataagttgtttctcccaacaggccc 20170389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 24887218 - 24887250
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctact 118  Q
    ||||||||||||||| |||||||||||||||||    
T  24887218 ctgtttggatttactgatttgagtttatctact 24887250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 27896317 - 27896373
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaa-taagctgtttatccaaacag 414  Q
    ||||||||| |||||| || | |||||||||||||| ||||||||||||| ||||||    
T  27896317 cttatcatggtaagcatttatactataagctgcaaattaagctgtttatcaaaacag 27896373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 409
Target Start/End: Original strand, 35127497 - 35127557
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaat-aagctgtttatcca 409  Q
    |||||||  ||||||||||||||  ||| || |||||||||||||| ||||||||||||||    
T  35127497 acataagcacttatcatgataagagcttatggtataagctgcaaatgaagctgtttatcca 35127557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 36783282 - 36783334
Alignment:
Q  98 acttatttgagtttatctactagcataagttttgttatactgttagggagaac 150  Q
    ||||||||||||||||||| ||  ||||||||||| | |||||| ||||||||    
T  36783282 acttatttgagtttatctattaatataagttttgtgagactgtttgggagaac 36783334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 115
Target Start/End: Original strand, 36878693 - 36878721
Alignment:
Q  87 tgtttggatttacttatttgagtttatct 115  Q
    |||||||||||||||||||||||||||||    
T  36878693 tgtttggatttacttatttgagtttatct 36878721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 423
Target Start/End: Original strand, 39602337 - 39602377
Alignment:
Q  383 ataagctgcaaataagctgtttatccaaacaggccccaact 423  Q
    |||||||||||||||| ||||||||||| ||||||| ||||    
T  39602337 ataagctgcaaataagttgtttatccaatcaggccctaact 39602377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 39980782 - 39980750
Alignment:
Q  177 tttttcagcttattttcataagttctccaatat 209  Q
    ||||||| |||||||||||||||||||||||||    
T  39980782 tttttcaacttattttcataagttctccaatat 39980750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 46478742 - 46478710
Alignment:
Q  177 tttttcagcttattttcataagttctccaatat 209  Q
    ||||||| |||||||||||||||||||||||||    
T  46478742 tttttcaacttattttcataagttctccaatat 46478710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 51929901 - 51929854
Alignment:
Q  77 acttgggcgctgtttggatttacttatttgagtttatctactagcataa 125  Q
    |||||||| ||||||||||| ||||||||||| ||||||| ||||||||    
T  51929901 acttgggc-ctgtttggattgacttatttgagcttatctattagcataa 51929854  T

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Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 86 - 209
Target Start/End: Original strand, 16937801 - 16937932
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaac--------acaattttcactagcct 177  Q
    |||||||||||  |||||||||| ||||||||||||||||||||||| | | |||| || ||||| |||||||||        |||| |||||  ||| |    
T  16937801 ctgtttggattggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttcataagctt 16937900  T
Q  178 ttttcagcttattttcataagttctccaatat 209  Q
    |||||||||||||||| |||||||||||||||    
T  16937901 ttttcagcttattttcctaagttctccaatat 16937932  T

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Target: chr5; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 324 - 421
Target Start/End: Original strand, 3735601 - 3735698
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccccaa 421  Q
    |||| ||| ||| |||||||||| |  ||||||  ||||||||||||| | ||| |||||||||||||||||| | ||||||||||||||||||||||    
T  3735601 tatagaaatagcttatgtaagcttatccataagcgcttatcatgataatctcttgtgctataagctgcaaataggttgtttatccaaacaggccccaa 3735698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 9202883 - 9202939
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  9202883 cttatcatgataaacacttgtgctataagctgcaaataagatgtttatccaaacagg 9202939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 410
Target Start/End: Original strand, 19460512 - 19460572
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaa 410  Q
    |||||||  |||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  19460512 acataagtgcttatcatgataagcatttgtgctataagctgcaaataagctgtttatccaa 19460572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 10640105 - 10640030
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||||  ||||||||||||||||||||  |||||||||||| ||| |||| |||||||| ||||||||||    
T  10640105 ctgtttggattagcttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaaca 10640030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 209
Target Start/End: Original strand, 7705916 - 7706047
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaac--------acaattttcactagcct 177  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||| |  || || |||||||| |||||||||        ||| |||||||  || |    
T  7705916 ctgtttggattgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatgacagttttcacctgctt 7706015  T
Q  178 ttttcagcttattttcataagttctccaatat 209  Q
    ||||| ||||||||||| ||||||||||||||    
T  7706016 ttttcggcttattttcacaagttctccaatat 7706047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 413
Target Start/End: Original strand, 24030547 - 24030601
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    ||||||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  24030547 cttatcatgataagtgcttgtgctataagctgcaaataagctgtttatccaaaca 24030601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 418
Target Start/End: Original strand, 7706126 - 7706183
Alignment:
Q  361 tatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||||||||||||| |||||||| ||||||||||| ||||||| |||||||||||    
T  7706126 tatcatgataagcacttgtgctataacctgcaaataagttgtttatacaaacaggccc 7706183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 88 - 209
Target Start/End: Complemental strand, 9107240 - 9107111
Alignment:
Q  88 gtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaac--------acaattttcactagccttt 179  Q
    ||||||||| ||||||||||||||||||| |  |||||||||||| | | |||| ||||||||  ||||||||        ||||||||||| | | |||    
T  9107240 gtttggattgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagcttaggacaattttcacaaactttt 9107141  T
Q  180 ttcagcttattttcataagttctccaatat 209  Q
    ||| ||| ||||||||||||||||||||||    
T  9107140 ttctgctaattttcataagttctccaatat 9107111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 418
Target Start/End: Complemental strand, 32372558 - 32372490
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||  ||||||||||||||  ||| |||||||||||||||||||| |||||||||||||| ||||    
T  32372558 acataagggcttatcatgataagtgcttgtgctataagctgcaaataagttgtttatccaaacatgccc 32372490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 412
Target Start/End: Original strand, 7319134 - 7319209
Alignment:
Q  337 tatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaac 412  Q
    |||||||||| |  ||||||  ||||||||||||||| ||| |||||||||||| ||||||||||||||| |||||    
T  7319134 tatgtaagcttatgcataagtgcttatcatgataagcgcttgtgctataagctgtaaataagctgtttattcaaac 7319209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 32010097 - 32010019
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaacacaa 164  Q
    ||||||||||| |||||||||||||||||||||  |||||||||  | | |||||| | |||||| |||||||||||||    
T  32010097 ctgtttggattgacttatttgagtttatctactcacataagtttcttcagactgtttgagagaacttatgaaaacacaa 32010019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 418
Target Start/End: Complemental strand, 39477884 - 39477827
Alignment:
Q  361 tatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||||||||| ||| | ||||||||||||||||||||| |||||| |||||||||    
T  39477884 tatcatgataagcgcttgtcctataagctgcaaataagctgcttatcccaacaggccc 39477827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 12857706 - 12857754
Alignment:
Q  161 acaattttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||| | | |||||||||||||||||||||||||||||||||    
T  12857706 acaattttcacaaccttttttcagcttattttcataagttctccaatat 12857754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 414
Target Start/End: Complemental strand, 28776919 - 28776855
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    |||||||  ||||||||||||||  |||  ||||||||||||||||||| |||||||||||||||    
T  28776919 acataagcacttatcatgataagtgcttaggctataagctgcaaataagttgtttatccaaacag 28776855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 398
Target Start/End: Complemental strand, 39105408 - 39105360
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataag 398  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  39105408 acataagcgcttatcatgataagcacttatgctataagctgcaaataag 39105360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 417
Target Start/End: Original strand, 16938003 - 16938070
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggcc 417  Q
    |||||||  ||||||||||||| ||||| || |||||||| |||||||| ||||| ||||||||||||    
T  16938003 acataagtgcttatcatgataaacacttgtgttataagcttcaaataagttgtttgtccaaacaggcc 16938070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 418
Target Start/End: Original strand, 25461900 - 25461959
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||||||||||| ||| || |||||||| ||||||| ||| ||||||||||||||||    
T  25461900 cttatcatgataagcgcttgtgttataagctacaaataacctgcttatccaaacaggccc 25461959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 333 - 416
Target Start/End: Complemental strand, 32941421 - 32941339
Alignment:
Q  333 agcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggc 416  Q
    |||||||| ||||| | || ||||  ||||||||| ||||  ||| ||||||||||||| ||||||||||||||||||||||||    
T  32941421 agcctatgcaagcttatacgtaagcgcttatcatggtaagtgctt-tgctataagctgctaataagctgtttatccaaacaggc 32941339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 414
Target Start/End: Complemental strand, 40426687 - 40426632
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    ||||||||||||||  ||| ||||||||||||||||| || |||||||||||||||    
T  40426687 cttatcatgataagtgcttgtgctataagctgcaaatgagttgtttatccaaacag 40426632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 416
Target Start/End: Original strand, 42573905 - 42573972
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaa-taagctgtttatccaaacaggc 416  Q
    |||||||  ||||||||||||||| ||   ||||||||||||||| ||||||||||||||||||||||    
T  42573905 acataagcgcttatcatgataagcgctcaggctataagctgcaaattaagctgtttatccaaacaggc 42573972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 418
Target Start/End: Complemental strand, 25461024 - 25460958
Alignment:
Q  352 ataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||| |||||||||||||||  ||| |||||||||||  | |||||||||||||||||||| ||||    
T  25461024 ataagctcttatcatgataagtgcttatgctataagctaaatataagctgtttatccaaacatgccc 25460958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 39594958 - 39594884
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||| ||||||||||| ||||||||   |||||||||||||| | |||| |||| ||| ||||||||||    
T  39594958 tgtttggattgacttatttgagcttatctaccgacataagttttgttagattgtttgggacaacttatgaaaaca 39594884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 411
Target Start/End: Original strand, 1465145 - 1465206
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaa 411  Q
    |||||||  |||||| |||||||||||| |||||||| |||| ||||| |||||||||||||    
T  1465145 acataagcgcttatcttgataagcacttatgctataaactgcgaataatctgtttatccaaa 1465206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 379 - 416
Target Start/End: Complemental strand, 36145237 - 36145200
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacaggc 416  Q
    |||||||||||||||||||||||||||| |||||||||    
T  36145237 tgctataagctgcaaataagctgtttatacaaacaggc 36145200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 417
Target Start/End: Complemental strand, 37954617 - 37954580
Alignment:
Q  380 gctataagctgcaaataagctgtttatccaaacaggcc 417  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  37954617 gctataagctgcaaataagctatttatccaaacaggcc 37954580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 42500374 - 42500415
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacaggcccca 420  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  42500374 tgctataagctggaaataagctgtttatccaaacagacccca 42500415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 12857339 - 12857387
Alignment:
Q  161 acaattttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||| ||| ||||||||||||||||  |||||||||||||||    
T  12857339 acaattttcacaagcttttttcagcttatttttgtaagttctccaatat 12857387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 15246985 - 15246913
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaa 158  Q
    ||||||||||||  ||||||||| |||||||||  |||||||||| ||| | |||| |||||||| |||||||    
T  15246985 ctgtttggatttgtttatttgagcttatctactgacataagttttattagaatgtttgggagaacttatgaaa 15246913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 415
Target Start/End: Complemental strand, 24029993 - 24029937
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||| ||||||| || || ||||||||  ||||||||||||||||||||||||    
T  24029993 cttatcataataagcatttttgttataagctctaaataagctgtttatccaaacagg 24029937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 409
Target Start/End: Complemental strand, 39248044 - 39247984
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataa-gctgcaaataagctgtttatcca 409  Q
    |||||||  |||||||| ||||||| || |||||||| |||||||||||||||||||||||    
T  39248044 acataagcgcttatcatcataagcaattatgctataaagctgcaaataagctgtttatcca 39247984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 1464938 - 1465013
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||| ||| ||||||||||| ||| || |||||||||||| ||  | |||||| |||||||| ||||||||||    
T  1464938 ctgtttgaattgacttatttgagcttagcttctagcataagttctgcgagactgttcgggagaacttatgaaaaca 1465013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 397
Target Start/End: Original strand, 3569097 - 3569132
Alignment:
Q  362 atcatgataagcacttctgctataagctgcaaataa 397  Q
    |||||||||||||||| |||||||||||||||||||    
T  3569097 atcatgataagcacttgtgctataagctgcaaataa 3569132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 126
Target Start/End: Complemental strand, 8820911 - 8820872
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataag 126  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  8820911 tgtttggatttacttatttgatcttatctactagcataag 8820872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 10639887 - 10639825
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||  |||||| |||||| ||||| |||| |||| |||||||||||||||||||||||||    
T  10639887 acataagtgcttatcgtgataaccacttttgct-taagttgcaaataagctgtttatccaaaca 10639825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 395
Target Start/End: Original strand, 10772014 - 10772049
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaat 395  Q
    |||||||||||||||||| |||||||||||||||||    
T  10772014 ttatcatgataagcacttatgctataagctgcaaat 10772049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 13697904 - 13697959
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    |||||||||||||   ||| || ||||||||||||||||| |||||||||||||||    
T  13697904 cttatcatgataaatgcttatgttataagctgcaaataagttgtttatccaaacag 13697959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 415
Target Start/End: Complemental strand, 31051822 - 31051767
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||||||||||||| ||||||||||||| |||||   |||||| ||||||||    
T  31051822 ttatcatgataagcacttgtgctataagctgcgaataaatggtttattcaaacagg 31051767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 41981645 - 41981696
Alignment:
Q  110 ttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||||||| |||||||| | |||||| |||||||| ||||||||||    
T  41981645 ttatctactagcattagttttgtgagactgtttgggagaacttatgaaaaca 41981696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 11700313 - 11700259
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgttatactgtt 141  Q
    ||||||||||| |||||||||| ||||| ||| ||||||||||||| | ||||||    
T  11700313 tgtttggatttgcttatttgagcttatccactggcataagttttgtgagactgtt 11700259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 12554388 - 12554334
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||| ||||||  || |||| ||||||||||||||| ||||||||||||||    
T  12554388 cttatcataataagcgtttgtgctttaagctgcaaataagttgtttatccaaaca 12554334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 32703573 - 32703639
Alignment:
Q  349 aacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||  |||||||||||||   ||| |||||||||||||||||||| ||||| || |||||||    
T  32703573 aacataagcgcttatcatgataaatgcttgtgctataagctgcaaataagttgtttttctaaacagg 32703639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 37954753 - 37954707
Alignment:
Q  163 aattttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    |||||||| |||| ||||||| |||||||||||| ||||||||||||    
T  37954753 aattttcattagcttttttcaacttattttcatatgttctccaatat 37954707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 1773023 - 1773097
Alignment:
Q  85 gctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||||||||  ||||||| || |||||||||  |||||||||||| | |||||  |||||||| ||||||||||    
T  1773023 gctgtttggattggcttattttagcttatctacttccataagttttgtgagactgt--gggagaacttatgaaaaca 1773097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 413
Target Start/End: Complemental strand, 3520355 - 3520302
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    ||||||||| |||  ||| |||||||||||| ||||||| ||||||||||||||    
T  3520355 ttatcatgacaagtgcttgtgctataagctgaaaataagttgtttatccaaaca 3520302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 404
Target Start/End: Complemental strand, 7984929 - 7984868
Alignment:
Q  343 agctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgttt 404  Q
    |||| |||||||||  ||||||||||||||| | | | |||||||||||||||||| |||||    
T  7984929 agcttaaacataagcgcttatcatgataagcgcatgtactataagctgcaaataagttgttt 7984868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 11064814 - 11064745
Alignment:
Q  90 ttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaa 159  Q
    ||||||| | |||||||||||||||||| | |||||||||||| | | |||| | |||||| ||||||||    
T  11064814 ttggattgatttatttgagtttatctaccaacataagttttgtgagattgtttgagagaacttatgaaaa 11064745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 414
Target Start/End: Original strand, 12433521 - 12433570
Alignment:
Q  365 atgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    ||||||| | ||| || ||||||||||||||||| |||||||||||||||    
T  12433521 atgataaacgcttgtgttataagctgcaaataagttgtttatccaaacag 12433570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 42500257 - 42500290
Alignment:
Q  176 ctttttcagcttattttcataagttctccaatat 209  Q
    |||||||| |||||||||||||||||||||||||    
T  42500257 ctttttcaacttattttcataagttctccaatat 42500290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 2092508 - 2092472
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcataa 125  Q
    |||||||  ||||||||||||||||||||||||||||    
T  2092508 tttggatcgacttatttgagtttatctactagcataa 2092472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 4014442 - 4014470
Alignment:
Q  178 ttttcagcttattttcataagttctccaa 206  Q
    |||||||||||||||||||||||||||||    
T  4014442 ttttcagcttattttcataagttctccaa 4014470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 12334279 - 12334315
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcataa 125  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  12334279 tttggattgacttatttgagtttatctagtagcataa 12334315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 12425713 - 12425661
Alignment:
Q  98 acttatttgagtttatctactagcataagttttgttatactgttagggagaac 150  Q
    ||||||||||| |||||||||  |||||||||||| | |||||| ||||||||    
T  12425713 acttatttgagcttatctactgtcataagttttgtgagactgtttgggagaac 12425661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 22209746 - 22209786
Alignment:
Q  90 ttggatttacttatttgagtttatctactagcataagtttt 130  Q
    ||||||| ||||||||||| ||||||||| |||||||||||    
T  22209746 ttggattgacttatttgagcttatctactggcataagtttt 22209786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 24030096 - 24030169
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||| || |||||||||||||||| |||| |||||| |||  |  ||||||| |||||||| ||||||||||    
T  24030096 ctgtttggtttgacttatttgagtttatttactggcataacttt--tactactgtttgggagaacttatgaaaaca 24030169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 26004915 - 26004955
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataag 126  Q
    ||||||||||| |||||||| || |||||||||||||||||    
T  26004915 ctgtttggattgacttattttagcttatctactagcataag 26004955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 29925894 - 29925862
Alignment:
Q  177 tttttcagcttattttcataagttctccaatat 209  Q
    ||||||| |||||||||||||||||||||||||    
T  29925894 tttttcaacttattttcataagttctccaatat 29925862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 206
Target Start/End: Complemental strand, 34160783 - 34160755
Alignment:
Q  178 ttttcagcttattttcataagttctccaa 206  Q
    |||||||||||||||||||||||||||||    
T  34160783 ttttcagcttattttcataagttctccaa 34160755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 205
Target Start/End: Complemental strand, 35446108 - 35446080
Alignment:
Q  177 tttttcagcttattttcataagttctcca 205  Q
    |||||||||||||||||||||||||||||    
T  35446108 tttttcagcttattttcataagttctcca 35446080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 40335791 - 40335823
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctact 118  Q
    ||||||||||| |||||||||||||||||||||    
T  40335791 ctgtttggattgacttatttgagtttatctact 40335823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 40439102 - 40439153
Alignment:
Q  361 tatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    ||||| ||||||| ||| || |||||| |||||||||||||||||||||||||    
T  40439102 tatcaagataagcgcttgtg-tataaggtgcaaataagctgtttatccaaaca 40439153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 412
Target Start/End: Complemental strand, 40452233 - 40452189
Alignment:
Q  368 ataagcacttctgctataagctgcaaataagctgtttatccaaac 412  Q
    |||||| ||| |||| ||||||||||||||||||||||| |||||    
T  40452233 ataagcccttttgctgtaagctgcaaataagctgtttattcaaac 40452189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 42569544 - 42569576
Alignment:
Q  100 ttatttgagtttatctactagcataagttttgt 132  Q
    |||||||||| ||||||||||||||||||||||    
T  42569544 ttatttgagtgtatctactagcataagttttgt 42569576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 42583493 - 42583529
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  42583493 tgctataagcttcaaagaagctgtttatccaaacagg 42583529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 391
Target Start/End: Complemental strand, 42646580 - 42646548
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgc 391  Q
    ||||||||||||||||||| |||||||||||||    
T  42646580 cttatcatgataagcacttgtgctataagctgc 42646548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 415
Target Start/End: Complemental strand, 264306 - 264250
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  264306 cttatcatgataagcacttgtgctataagctgcaaattagctgttaatccaaacagg 264250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 418
Target Start/End: Complemental strand, 6538464 - 6538383
Alignment:
Q  337 tatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||| ||||| | |||||||  |||||||| |||||  ||| |||||||||||||||||||||| |||||||||||||||||    
T  6538464 tatgcaagcttatacataagcgcttatcattataagtgcttgtgctataagctgcaaataagctatttatccaaacaggccc 6538383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 418
Target Start/End: Complemental strand, 34430639 - 34430582
Alignment:
Q  361 tatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||    
T  34430639 tatcatgataagcacttgtgctataagctgcaaataagatgtttatcgaaacatgccc 34430582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 415
Target Start/End: Complemental strand, 24626255 - 24626164
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||| ||| ||| |||||||||| | |||||||   | ||||||||||||| || |||||||||||| ||||||| ||||||||||||||||    
T  24626255 tatagaaatagcttatgtaagcttatacataagcaatcatcatgataagcatttgtgctataagctgtaaataagttgtttatccaaacagg 24626164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 415
Target Start/End: Complemental strand, 35069487 - 35069431
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||||| | ||| |||||||||||||||||||| |||||||| |||||||    
T  35069487 cttatcatgataaacgcttgtgctataagctgcaaataagttgtttatcaaaacagg 35069431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 34404643 - 34404690
Alignment:
Q  85 gctgtttggatttacttatttgagtttatctactagcataagttttgt 132  Q
    |||||||||||||||||||||||||||||| |||  ||||||||||||    
T  34404643 gctgtttggatttacttatttgagtttatcaactgacataagttttgt 34404690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 835179 - 835225
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgt 132  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||    
T  835179 ctgtttggattgccttatttgagcttatctactagcataagttttgt 835225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 4163304 - 4163230
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||||||  |||||||||| ||||||||| |||||||||||   | |||||| | |||||||||||||||||    
T  4163304 tgtttggattggcttatttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaaca 4163230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 4224925 - 4224851
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||||||  |||||||||| ||||||||| |||||||||||   | |||||| | |||||||||||||||||    
T  4224925 tgtttggattggcttatttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaaca 4224851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 410
Target Start/End: Complemental strand, 9632835 - 9632785
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatccaa 410  Q
    |||| |||||||||| || |||||||||||||||||||| |||||||||||    
T  9632835 ttattatgataagcatttgtgctataagctgcaaataagttgtttatccaa 9632785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 411
Target Start/End: Original strand, 10645470 - 10645516
Alignment:
Q  365 atgataagcacttctgctataagctgcaaataagctgtttatccaaa 411  Q
    |||||||||| || |||||||||||||||||||| ||||||||||||    
T  10645470 atgataagcatttgtgctataagctgcaaataagttgtttatccaaa 10645516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 365 - 414
Target Start/End: Complemental strand, 14929653 - 14929604
Alignment:
Q  365 atgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    ||||||||||||| ||||||||||||||||| || ||||| |||||||||    
T  14929653 atgataagcacttgtgctataagctgcaaatgagttgtttgtccaaacag 14929604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 407
Target Start/End: Original strand, 8365113 - 8365157
Alignment:
Q  363 tcatgataagcacttctgctataagctgcaaataagctgtttatc 407  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||    
T  8365113 tcatgataagcgcttatgctataagctgcgaataagctgtttatc 8365157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 413
Target Start/End: Complemental strand, 13907523 - 13907491
Alignment:
Q  381 ctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||||||||||||||||||||||||||||    
T  13907523 ctataagctgcaaataagctgtttatccaaaca 13907491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 418
Target Start/End: Complemental strand, 31623481 - 31623446
Alignment:
Q  383 ataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||||||||||||||| |||||||||||||||    
T  31623481 ataagctgcaaataagctgtctatccaaacaggccc 31623446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 209
Target Start/End: Original strand, 31624959 - 31624990
Alignment:
Q  178 ttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||||||||||||||||||||||||    
T  31624959 ttttcagcttattttcataagttctccaatat 31624990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 414
Target Start/End: Complemental strand, 32014152 - 32014097
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    ||||| ||||||||||||| | ||||||||||||||||||   |||||||||||||    
T  32014152 cttataatgataagcactttttctataagctgcaaataagtaatttatccaaacag 32014097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 103582 - 103536
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgt 132  Q
    ||||||||||| ||||||||||| |||| || |||||||||||||||    
T  103582 ctgtttggattgacttatttgagcttatatattagcataagttttgt 103536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 848140 - 848067
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaac 160  Q
    |||||||||||  |||||||||| ||||||| ||||||||||||||| | |||||| || ||||| ||| |||||    
T  848140 ctgtttggattgccttatttgagcttatcta-tagcataagttttgtgagactgtttggaagaacttataaaaac 848067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 3738247 - 3738213
Alignment:
Q  92 ggatttacttatttgagtttatctactagcataag 126  Q
    ||||| |||||||||||||||||||||||||||||    
T  3738247 ggattgacttatttgagtttatctactagcataag 3738213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 413
Target Start/End: Complemental strand, 9604775 - 9604741
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||| ||||||||||||||||||||||||||    
T  9604775 tgctataaactgcaaataagctgtttatccaaaca 9604741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 10645304 - 10645378
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||||||||  || ||||||| ||||||| |  |||||||||||| | |||||| |||||||| ||||||||||    
T  10645304 tgtttggattggctaatttgaggttatctaatgacataagttttgtaagactgtttgggagaacttatgaaaaca 10645378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 835041 - 835070
Alignment:
Q  177 tttttcagcttattttcataagttctccaa 206  Q
    ||||||||||||||||||||||||||||||    
T  835041 tttttcagcttattttcataagttctccaa 835070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 3153541 - 3153508
Alignment:
Q  177 tttttcagcttattttcataagttctccaatatt 210  Q
    |||||||||||||||||||||| |||||||||||    
T  3153541 tttttcagcttattttcataagctctccaatatt 3153508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 12111116 - 12111079
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcataag 126  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  12111116 tttggattgacttatttgagcttatctactagcataag 12111079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 397
Target Start/End: Complemental strand, 18076156 - 18076083
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataa 397  Q
    |||||||| | | |||| ||||| | |||||||  ||||| ||||||||| ||| |||||||||||||||||||    
T  18076156 tataaaaataacttatgcaagcttatacataagtgcttattatgataagcgcttgtgctataagctgcaaataa 18076083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 26559160 - 26559233
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcataag-ttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||| ||||||||||||||| ||||| |||||||  ||||| | |||||| || ||||| ||||||||||    
T  26559160 tttggattaacttatttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaaca 26559233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 30536883 - 30536924
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagt 127  Q
    ||||||||||| |||||||||||||||||||||  |||||||    
T  30536883 ctgtttggattgacttatttgagtttatctacttacataagt 30536924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 32205931 - 32205972
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagt 127  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  32205931 ctgtttggattgacttatttgaccttatctactagcataagt 32205972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 34882339 - 34882412
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaa 159  Q
    ||||||||||| |||||||| |  ||||||||||| ||||||||||||  ||||||  ||||||  ||||||||    
T  34882339 ctgtttggattgacttatttcatcttatctactagtataagttttgttggactgtttaggagaatttatgaaaa 34882412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 160969 - 161001
Alignment:
Q  177 tttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||||||||||||||||||| |||||    
T  160969 tttttcagcttattttcataagttctctaatat 161001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 658580 - 658636
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||||||||| |||| ||||||||| || ||||||   |||||||||||||||    
T  658580 cttatcatgataagtacttgtgctataagttgaaaataaatagtttatccaaacagg 658636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 835267 - 835295
Alignment:
Q  178 ttttcagcttattttcataagttctccaa 206  Q
    |||||||||||||||||||||||||||||    
T  835267 ttttcagcttattttcataagttctccaa 835295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 837234 - 837262
Alignment:
Q  178 ttttcagcttattttcataagttctccaa 206  Q
    |||||||||||||||||||||||||||||    
T  837234 ttttcagcttattttcataagttctccaa 837262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 2455126 - 2455066
Alignment:
Q  100 ttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaac 160  Q
    ||||||||  |||||||||| |||||||||||| | |||||| |||||||| | |||||||    
T  2455126 ttatttgaacttatctactaacataagttttgtgagactgtttgggagaacttctgaaaac 2455066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 23063663 - 23063719
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||||| || || ||||||||| |||||||||| || | |||||||||||    
T  23063663 cttatcatgataatcatttgtgctataagatgcaaataagttgataatccaaacagg 23063719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 418
Target Start/End: Complemental strand, 30926463 - 30926406
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||||||||||| ||| ||||||||||||| |  ||| |||||||| ||||||||||    
T  30926463 cttatcatgataagcccttgtgctataagctgcca--aagttgtttatctaaacaggccc 30926406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 418
Target Start/End: Complemental strand, 158067 - 157973
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||| ||| |||||||||| |  ||||||   ||||||| |||||   || ||||||||||||||||||||||||||||||||||||||||    
T  158067 tataaaaatagcttatgtaagctaatgcataagcaattatcatcataagtgtttgtgctataagctgcaaataagctgtttatccaaacaggccc 157973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 414
Target Start/End: Complemental strand, 17204098 - 17204008
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    |||||||||||| |||||||||| | |||||||   ||||| |||||||  ||| | |||||||||||||||||| |||||||||||||||    
T  17204098 tataaaaacagcttatgtaagctaacacataagcggttatcgtgataagtgcttgttctataagctgcaaataagttgtttatccaaacag 17204008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 209
Target Start/End: Complemental strand, 54426195 - 54426064
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaac--------acaattttcactagcct 177  Q
    |||||||||||  |||||||||| ||||||||| ||||||||||||| | |||| | |||||||| || ||||||        ||||||||||  ||| |    
T  54426195 ctgtttggattggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatgacaattttcataagctt 54426096  T
Q  178 ttttcagcttattttcataagttctccaatat 209  Q
    ||||||  ||||||||||||||||||||||||    
T  54426095 ttttcaagttattttcataagttctccaatat 54426064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 27028 - 27083
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    ||||||||||||||| ||| |||||||||||||||| ||| |||||||||||||||    
T  27028 cttatcatgataagcgcttgtgctataagctgcaaacaagatgtttatccaaacag 27083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 18815052 - 18814960
Alignment:
Q  323 ttataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggc 416  Q
    ||||||||||||| |||||||||| |  || |||  ||||| ||||||||||||| ||| ||||||||||||||| |  |||||||||||||||    
T  18815052 ttataaaaacagcttatgtaagcttatgcaaaagtgcttat-atgataagcacttgtgccataagctgcaaataaaccatttatccaaacaggc 18814960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 24169220 - 24169127
Alignment:
Q  325 ataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||| ||| |||||||||||| |||||||  || |||||||||||  ||  || |||||||||||| |||||||||| | |||||||||||    
T  24169220 ataaaaatagcttatgtaagctcatacataagcgctaatcatgataagtgctggtgatataagctgcaagtaagctgtttctgcaaacaggccc 24169127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 40174695 - 40174634
Alignment:
Q  100 ttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||||||||||||| |||||||||||| | |||||| |||| ||| ||||||||||    
T  40174695 ttatttgagtttatctactaacataagttttgtgagactgtttgggataacttatgaaaaca 40174634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 45935365 - 45935417
Alignment:
Q  366 tgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||| |||  ||||||||||||||||||| |||||||||||||||||||    
T  45935365 tgataagcgcttgagctataagctgcaaataagttgtttatccaaacaggccc 45935417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 49940084 - 49940160
Alignment:
Q  85 gctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||||| ||||||||||| ||| || ||| |||||||||||| | |||||| | |||||| ||||||||||    
T  49940084 gctgtttggattgacttatttgagcttacctgctaacataagttttgtgagactgtttgagagaacttatgaaaaca 49940160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 418
Target Start/End: Original strand, 50662870 - 50662926
Alignment:
Q  362 atcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||    
T  50662870 atcatgataagctcttgtgatataagctgcaaataagttgtttatccaaacatgccc 50662926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 11389470 - 11389407
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||  ||||||||||||||||||  || ||||| ||||||||||| ||||||||||||||    
T  11389470 acataagcacttatcatgataagcactcatgatataaactgcaaataagttgtttatccaaaca 11389407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 17822783 - 17822911
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaac--------acaattttcactagcct 177  Q
    ||||||||||| ||||||||||| |||||||||  |||||||| ||| | ||| ||  ||||||| |||||||||        ||| ||||||  ||| |    
T  17822783 ctgtttggattaacttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacatttttcataagctt 17822882  T
Q  178 ttttcagcttattttcataagttctccaa 206  Q
    |||| ||||||||||||||||||||||||    
T  17822883 tttttagcttattttcataagttctccaa 17822911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 360 - 415
Target Start/End: Original strand, 35571763 - 35571818
Alignment:
Q  360 ttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||| ||||||||||| ||||||| | ||||||||| ||||||||||||||||    
T  35571763 ttatcatcataagcacttccgctataaacggcaaataaggtgtttatccaaacagg 35571818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 418
Target Start/End: Original strand, 39603596 - 39603635
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  39603596 tgctataagctgcaaataagctgtttatccaaataggccc 39603635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 39691067 - 39691122
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgtt 141  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||||||| | ||||||    
T  39691067 ctgtttgaattgacttatttgagcttatctactagcataagttttgtgagactgtt 39691122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 417
Target Start/End: Complemental strand, 44797818 - 44797759
Alignment:
Q  358 tcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggcc 417  Q
    ||||| |||||||| | ||| ||||||||| |||||||||| ||||||||||||||||||    
T  44797818 tcttaccatgataatcgcttgtgctataagttgcaaataagttgtttatccaaacaggcc 44797759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 209
Target Start/End: Original strand, 26783 - 26913
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca--------caattttcactagcct 177  Q
    |||||||||||  |||||||||| ||||| ||| ||||||| ||||||| ||||||   |||||  ||||||||||        ||| |||||| ||| |    
T  26783 ctgtttggattggcttatttgagcttatcaactggcataagctttgttagactgtttccgagaaattatgaaaacagcttatgacaaatttcacaagc-t 26881  T
Q  178 ttttcagcttattttcataagttctccaatat 209  Q
    ||||||| ||||||||||||||||||||||||    
T  26882 ttttcagattattttcataagttctccaatat 26913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 35571549 - 35571595
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgt 132  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||    
T  35571549 ctgtttggattggcttatttgagcttatctactagcataagttttgt 35571595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 41336911 - 41336837
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||| |||||||||||||||||||||  |||||||||||| | |  |||||| ||||| || |||||||    
T  41336911 tgtttggattgacttatttgagtttatctactcacataagttttgtgagatagttaggaagaacttaagaaaaca 41336837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 413
Target Start/End: Original strand, 44863097 - 44863151
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||||| |||  ||| |||||||||||||||||||| ||||||||||||||    
T  44863097 cttatcatgacaagtgcttgtgctataagctgcaaataagttgtttatccaaaca 44863151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 418
Target Start/End: Original strand, 50681199 - 50681293
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||| ||| | |||||||| | ||||||   ||||||||||||||  ||| |||||||||||  ||||||| |||||||||||||| ||||    
T  50681199 tataaaaatagcttttgtaagcttatacataaacgcttatcatgataagttcttgtgctataagctataaataagttgtttatccaaacaagccc 50681293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 415
Target Start/End: Original strand, 35571958 - 35572022
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||  ||| ||||||||| ||||| |||||||||||||||||||| |||||||||| |||||    
T  35571958 acataagtgcttgtcatgataaccacttgtgctataagctgcaaataag-tgtttatccatacagg 35572022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 411
Target Start/End: Complemental strand, 3155538 - 3155486
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaa 411  Q
    ||||||||||||||| ||| | |||||||||||| ||||| ||||||||||||    
T  3155538 cttatcatgataagcgcttgtactataagctgcagataagttgtttatccaaa 3155486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 18815175 - 18815111
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaac 150  Q
    |||||||||||  |||||||||| ||| ||||||||||||||||||| | |||||| | ||||||    
T  18815175 ctgtttggattggcttatttgagcttacctactagcataagttttgtgagactgtttgagagaac 18815111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 22662169 - 22662209
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataag 126  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  22662169 ctgtttggattgacttatttgagtttatctactaacataag 22662209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 22666648 - 22666688
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataag 126  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  22666648 ctgtttggattgacttatttgagtttatctactaacataag 22666688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 46588074 - 46588122
Alignment:
Q  161 acaattttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||  |||||||| || |||||||||||||||||||||||||    
T  46588074 acaattttcataagccttttccaacttattttcataagttctccaatat 46588122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 46592210 - 46592258
Alignment:
Q  161 acaattttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    ||||||||||  |||||||| || |||||||||||||||||||||||||    
T  46592210 acaattttcataagccttttccaacttattttcataagttctccaatat 46592258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 420
Target Start/End: Complemental strand, 47771925 - 47771869
Alignment:
Q  365 atgataagcacttctgctataagctgcaaa-taagctgtttatccaaacaggcccca 420  Q
    ||||||||| ||| ||||||||||| |||| ||||||||||||||||||||| ||||    
T  47771925 atgataagcgcttatgctataagctccaaaataagctgtttatccaaacagggccca 47771869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 1374494 - 1374569
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    ||||| |||||  |||| ||||| |||||||||||||||| |||||| || ||||| |||||||  ||||||||||    
T  1374494 ctgttaggattggcttaattgagcttatctactagcataaattttgtgattctgtttgggagaatatatgaaaaca 1374569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 126
Target Start/End: Complemental strand, 22796806 - 22796767
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataag 126  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  22796806 tgtttggattgatttatttgagtttatctactagcataag 22796767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 25904359 - 25904414
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 414  Q
    ||||||||||||||  ||| |||||||| |||||||| || |||||||||||||||    
T  25904359 cttatcatgataagtgcttgtgctataatctgcaaatgagttgtttatccaaacag 25904414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 27043748 - 27043803
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgtt 141  Q
    ||||||||||| ||||||||||| |||||||||  |||||||||||| | ||||||    
T  27043748 ctgtttggattgacttatttgagcttatctactgacataagttttgtgaaactgtt 27043803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 28615486 - 28615447
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataa 125  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  28615486 ctgtttggattgacttatttaagtttatctactagcataa 28615447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 418
Target Start/End: Complemental strand, 43505916 - 43505824
Alignment:
Q  324 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 418  Q
    |||||||| ||| |||| ||||| | |||||||  |||||||||||  ||  || ||||||||| |||||||||| |||||||||||||| ||||    
T  43505916 tataaaaatagcttatgcaagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaacatgccc 43505824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 55437228 - 55437153
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||||  ||||||||||||||||||||  |||||||||||| | | |||| |  ||||| ||||||||||    
T  55437228 ctgtttggattggcttatttgagtttatctactgccataagttttgtgaaattgtttgaaagaacttatgaaaaca 55437153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 417
Target Start/End: Complemental strand, 2243982 - 2243944
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacaggcc 417  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  2243982 tgctataagctgtaaataatctgtttatccaaacaggcc 2243944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 6987660 - 6987722
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagt-tttgttatactgttagggaga 148  Q
    |||||| ||| ||||| |||||||||||||||||||||||| ||||| | |||||| ||||||    
T  6987660 tgtttgtattgacttaattgagtttatctactagcataagtgtttgtgagactgtttgggaga 6987722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 123
Target Start/End: Complemental strand, 25896933 - 25896899
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcat 123  Q
    |||||||| ||||||||||||||||||||||||||    
T  25896933 tttggattcacttatttgagtttatctactagcat 25896899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 350 - 415
Target Start/End: Original strand, 26520355 - 26520421
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaa-taagctgtttatccaaacagg 415  Q
    |||||||  ||||||||||||| ||||| ||||| |||| ||||| |||| ||||||||||||||||    
T  26520355 acataagtgcttatcatgataaacacttatgctagaagcagcaaattaagttgtttatccaaacagg 26520421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 125
Target Start/End: Original strand, 37575855 - 37575893
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataa 125  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  37575855 tgtttggattgacttatttgagtttatctgctagcataa 37575893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 411
Target Start/End: Complemental strand, 44138492 - 44138442
Alignment:
Q  361 tatcatgataagcacttctgctataagctgcaaataagctgtttatccaaa 411  Q
    ||||||||||||  ||| | ||| |||||||||||||||||||||||||||    
T  44138492 tatcatgataagtgcttgtactaaaagctgcaaataagctgtttatccaaa 44138442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 49003963 - 49004033
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaa 159  Q
    |||||| || |||||||||| |||||||||||| |||||||||| | ||| || | |||||| ||||||||    
T  49003963 tttggaattgcttatttgagcttatctactagcttaagttttgtgagactatttgagagaacttatgaaaa 49004033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 413
Target Start/End: Complemental strand, 17823068 - 17823019
Alignment:
Q  365 atgataagcacttctgctataagctgcaaat-aagctgtttatccaaaca 413  Q
    ||||||||| ||| |||||| |||||||||| ||||||||||||||||||    
T  17823068 atgataagcccttatgctatgagctgcaaattaagctgtttatccaaaca 17823019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 22030352 - 22030230
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaac--------acaattttcactagcctttt 180  Q
    |||| ||| ||||||||||| || |||| ||||||||||||||| |  || || |||||||| |||||||||        ||||||||||  ||| |||     
T  22030352 tttgtattgacttatttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttc 22030253  T
Q  181 tcagcttattttcataagttctc 203  Q
    |||| ||||||||||||||||||    
T  22030252 tcaggttattttcataagttctc 22030230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 24169414 - 24169369
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcataagttttgt 132  Q
    ||||||||||  |||||| ||||||||||||| |||||||||||||    
T  24169414 tgtttggattggcttattagagtttatctactggcataagttttgt 24169369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 44638145 - 44638182
Alignment:
Q  87 tgtttggatttacttatttgagtttatctactagcata 124  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  44638145 tgtttggattgacttatttgagtttatttactagcata 44638182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 418
Target Start/End: Original strand, 53294235 - 53294293
Alignment:
Q  359 cttatcatgataagcacttctgctataagctgcaaataagc-tgtttatccaaacaggccc 418  Q
    ||||||||||||||| ||| |||  |||||||||||||||| |||||||||||||| ||||    
T  53294235 cttatcatgataagcgcttgtgc--taagctgcaaataagcttgtttatccaaacatgccc 53294293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 55064900 - 55064859
Alignment:
Q  165 ttttcactagcctttttcagcttattttcataagttctccaa 206  Q
    |||||| |||| ||||||| ||||||||||||||||||||||    
T  55064900 ttttcaatagcttttttcatcttattttcataagttctccaa 55064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 55414331 - 55414404
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaa 159  Q
    ||||||||||| |||||||||||  |||||||| |||||| |||||| || |||||  ||||||  ||||||||    
T  55414331 ctgtttggattgacttatttgagagtatctactggcataatttttgtgatgctgtttaggagaatttatgaaaa 55414404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 437245 - 437293
Alignment:
Q  161 acaattttcactagcctttttcagcttattttcataagttctccaatat 209  Q
    ||||||||| | ||| ||| ||||||||||||||||| |||||||||||    
T  437245 acaattttcccaagcttttctcagcttattttcataaattctccaatat 437293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 825508 - 825536
Alignment:
Q  178 ttttcagcttattttcataagttctccaa 206  Q
    |||||||||||||||||||||||||||||    
T  825508 ttttcagcttattttcataagttctccaa 825536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 2244104 - 2244072
Alignment:
Q  177 tttttcagcttattttcataagttctccaatat 209  Q
    ||||||| |||||||||||||||||||||||||    
T  2244104 tttttcaccttattttcataagttctccaatat 2244072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 415
Target Start/End: Complemental strand, 4212847 - 4212811
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacagg 415  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  4212847 tgctataagctgaaaataagttgtttatccaaacagg 4212811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 9720572 - 9720612
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataag 126  Q
    ||||| ||||| |||||||||||||||||||||| ||||||    
T  9720572 ctgttgggattgacttatttgagtttatctactaacataag 9720612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 15173223 - 15173283
Alignment:
Q  88 gtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggaga 148  Q
    ||||||||| ||||||||||  |||||||||  |||||||||||| | |||||| ||||||    
T  15173223 gtttggattgacttatttgaacttatctactgacataagttttgtgagactgtttgggaga 15173283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 23320003 - 23319930
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||||||  |||||||||| |||||||||||||||  |||||  | |||||| |||||||  ||||||||||    
T  23320003 ctgtttggattggcttatttgagattatctactagcatacattttg--agactgtttgggagaagttatgaaaaca 23319930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 27330190 - 27330226
Alignment:
Q  379 tgctataagctgcaaataagctgtttatccaaacagg 415  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  27330190 tgctataagctacaaataagttgtttatccaaacagg 27330226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 29388766 - 29388702
Alignment:
Q  86 ctgtttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaac 150  Q
    |||||||| || ||||||||||  |||||||||| |||||||||||| | | |||| ||||||||    
T  29388766 ctgtttgggttgacttatttgaccttatctactaacataagttttgtaagattgtttgggagaac 29388702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 206
Target Start/End: Complemental strand, 44138611 - 44138583
Alignment:
Q  178 ttttcagcttattttcataagttctccaa 206  Q
    |||||||||||||||||||||||||||||    
T  44138611 ttttcagcttattttcataagttctccaa 44138583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 47119086 - 47119134
Alignment:
Q  365 atgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    ||||||||  ||| ||||||||| |||||||||| ||||||||||||||    
T  47119086 atgataagtgcttgtgctataagttgcaaataagttgtttatccaaaca 47119134  T

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Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 413
Target Start/End: Complemental strand, 49202559 - 49202527
Alignment:
Q  381 ctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||||||||||||| ||||||||||||||    
T  49202559 ctataagctgcaaataagttgtttatccaaaca 49202527  T

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Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 50004162 - 50004190
Alignment:
Q  178 ttttcagcttattttcataagttctccaa 206  Q
    |||||||||||||||||||||||||||||    
T  50004162 ttttcagcttattttcataagttctccaa 50004190  T

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Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 52315118 - 52315190
Alignment:
Q  89 tttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacctatgaaaaca 161  Q
    |||||||| |||||||||||||||||||||  | |||||||||| | | |||| || ||||| ||| ||||||    
T  52315118 tttggattgacttatttgagtttatctactgacgtaagttttgtgagattgtttggaagaacttatcaaaaca 52315190  T

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Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 58538 - 58475
Alignment:
Q  350 acataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaaca 413  Q
    |||||||  ||||| |||| |||||||| |||| ||||||||||||||| ||||||||||||||    
T  58538 acataagtgcttattatgacaagcacttgtgctctaagctgcaaataagttgtttatccaaaca 58475  T

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