View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10435_high_2 (Length: 293)
Name: NF10435_high_2
Description: NF10435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10435_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 52769614 - 52769895
Alignment:
| Q |
1 |
ttattgagagaatatataattcataagatacgtaccagtgtcgtagccaaagagtaatccaccaatgctagctacagaagtgagacacaaaatgtaaggg |
100 |
Q |
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| T |
52769614 |
ttattgagagaatatataattcataagatacgtaccagtgtcgtagccaaagagtaatccaccaatgctagctacagaagtgagacacaaaatgtaaggg |
52769713 |
T |
|
| Q |
101 |
ttcttaaacacagagactttcctttcagggtgtgtatccaaatacccagagcttcctggaattcgaattgatgttgttatcgtcatctcatcgtaacaaa |
200 |
Q |
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|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
52769714 |
ttcttaaacacagagacttttctttcagggtgtatatccaaatacccagagcttcctggaattcgaattgatgttgttaccgtcatctcatcgtaacaaa |
52769813 |
T |
|
| Q |
201 |
gattaatggattggatgattagttgagttaagtcccaatagatagccaatacaatattacaatacaagacaacgtgcttctt |
282 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
52769814 |
gattaatggattggatgattagttgagttaagtcccaatagatagccaatacaatattacaatacaagacaacatgcttctt |
52769895 |
T |
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