View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10435_high_4 (Length: 240)
Name: NF10435_high_4
Description: NF10435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10435_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 48167956 - 48168180
Alignment:
| Q |
1 |
tacattacctcaaagttcatgaaggtcggtgcgtcataattggctcaatggagaggcactagatcccttgttttacgagtaacccaggagggggtccata |
100 |
Q |
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| T |
48167956 |
tacattacctcaaagttcatgaaggtcggtgcgtcataattggctcaatggagaggcactagatcccttgttttacgagtaacccaggagggggtccata |
48168055 |
T |
|
| Q |
101 |
tttgagaataattgtgattaaattaagagagatcccacacttaaatttattgcagaaatcattgcnnnnnnnnnnnnnnnnnntttacactcatttattt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |
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| T |
48168056 |
tttgagaataattgtgattaaattaagagagatcccacacttaaatttattgcagaaatcattccaaaagaaaaaagagaaaatttacactcatttattt |
48168155 |
T |
|
| Q |
201 |
agaattatattaagcctccagattg |
225 |
Q |
| |
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||||||||||||||||||||||||| |
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| T |
48168156 |
agaattatattaagcctccagattg |
48168180 |
T |
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