View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10436_high_12 (Length: 279)
Name: NF10436_high_12
Description: NF10436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10436_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 52033522 - 52033790
Alignment:
| Q |
1 |
tgggaatccacttgttacccctatctttgcaacggttaacatccttgttggctacattttattaatctacattcttattccaacggcttattggggattt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52033522 |
tgggaatccacttgttacccctatctttgcaacggttaacatccttgttggctacattttattaatctacattcttattccaacggcttattggggattt |
52033621 |
T |
|
| Q |
101 |
aatctctataatgccaaaaacttccccatatactctaatgaactattcactgctcaaggtgtgagatacaatgtgacagctattgtgaacaacaagtttg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52033622 |
aatctctataatgccaaaaacttccccatatactctaatgaactattcagtgctcaaggtgtgagatacaatgtgacagctattgtgaacaacaagtttg |
52033721 |
T |
|
| Q |
201 |
agatagatatggatgcatataataatcaaggtcacattaatatgagtatcttcttttctatttcctatg |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52033722 |
agatagatatggatgcatataataatcaaggtcacattaatatgagtatcttcttttctatttcctatg |
52033790 |
T |
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