View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10436_high_16 (Length: 245)

Name: NF10436_high_16
Description: NF10436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10436_high_16
NF10436_high_16
[»] chr3 (32 HSPs)
chr3 (13-245)||(30261304-30261536)
chr3 (130-245)||(9218217-9218333)
chr3 (124-245)||(39329661-39329785)
chr3 (129-245)||(44218951-44219068)
chr3 (129-241)||(7886157-7886269)
chr3 (138-245)||(47684814-47684922)
chr3 (129-217)||(1923188-1923275)
chr3 (129-187)||(8769355-8769413)
chr3 (129-209)||(39144770-39144851)
chr3 (135-211)||(24618850-24618926)
chr3 (129-245)||(53583477-53583595)
chr3 (129-207)||(36315651-36315729)
chr3 (129-211)||(46194123-46194205)
chr3 (167-245)||(42547061-42547141)
chr3 (162-220)||(45267173-45267231)
chr3 (130-187)||(12745094-12745151)
chr3 (147-211)||(2868683-2868746)
chr3 (129-187)||(8764453-8764512)
chr3 (129-211)||(17776911-17776992)
chr3 (129-211)||(19078212-19078293)
chr3 (129-198)||(26479785-26479854)
chr3 (129-181)||(46627847-46627899)
chr3 (129-245)||(51165024-51165142)
chr3 (129-245)||(53051098-53051216)
chr3 (164-207)||(32172787-32172829)
chr3 (129-187)||(11528993-11529051)
chr3 (135-197)||(34081017-34081079)
chr3 (151-181)||(40614069-40614099)
chr3 (164-245)||(9017873-9017956)
chr3 (130-187)||(14756032-14756089)
chr3 (141-245)||(1334710-1334816)
chr3 (159-187)||(7673146-7673174)
[»] chr4 (46 HSPs)
chr4 (129-245)||(46958794-46958910)
chr4 (129-211)||(5499349-5499431)
chr4 (129-211)||(28330903-28330985)
chr4 (129-245)||(18872571-18872687)
chr4 (129-211)||(20964204-20964286)
chr4 (144-245)||(29990402-29990507)
chr4 (129-237)||(41594764-41594874)
chr4 (135-245)||(35027420-35027532)
chr4 (129-211)||(54217480-54217562)
chr4 (128-204)||(25902377-25902453)
chr4 (158-245)||(13529934-13530023)
chr4 (122-245)||(22872296-22872423)
chr4 (157-245)||(22129033-22129122)
chr4 (126-203)||(47277593-47277672)
chr4 (128-211)||(32949763-32949846)
chr4 (129-211)||(37315838-37315920)
chr4 (164-211)||(42132924-42132971)
chr4 (164-211)||(49218734-49218781)
chr4 (129-211)||(8759888-8759970)
chr4 (153-245)||(38838693-38838791)
chr4 (129-211)||(48400548-48400629)
chr4 (129-245)||(44633228-44633346)
chr4 (140-197)||(47386156-47386217)
chr4 (129-211)||(8295138-8295219)
chr4 (158-203)||(1920845-1920890)
chr4 (166-211)||(38320020-38320065)
chr4 (129-238)||(43125879-43125990)
chr4 (147-187)||(4360343-4360383)
chr4 (154-211)||(10309195-10309254)
chr4 (129-245)||(28279909-28280027)
chr4 (127-211)||(32324369-32324453)
chr4 (128-187)||(11583640-11583699)
chr4 (147-240)||(21240970-21241066)
chr4 (129-184)||(39976311-39976366)
chr4 (132-207)||(53848759-53848834)
chr4 (166-237)||(4485946-4486019)
chr4 (129-186)||(30680355-30680412)
chr4 (18-51)||(35594674-35594707)
chr4 (133-245)||(38614894-38614998)
chr4 (148-211)||(3502993-3503057)
chr4 (130-186)||(9778852-9778908)
chr4 (159-211)||(12619796-12619847)
chr4 (152-188)||(14452064-14452100)
chr4 (159-187)||(27790368-27790396)
chr4 (147-211)||(39258205-39258268)
chr4 (154-245)||(49448913-49449004)
[»] chr5 (37 HSPs)
chr5 (132-245)||(6629316-6629428)
chr5 (128-245)||(25111066-25111184)
chr5 (128-245)||(25170157-25170275)
chr5 (129-245)||(39212472-39212586)
chr5 (129-211)||(15564810-15564892)
chr5 (127-245)||(35988706-35988826)
chr5 (129-211)||(5147413-5147495)
chr5 (128-245)||(25108645-25108763)
chr5 (128-245)||(25167737-25167855)
chr5 (129-245)||(4475318-4475434)
chr5 (129-187)||(15898610-15898668)
chr5 (129-211)||(38979013-38979095)
chr5 (129-187)||(22983076-22983134)
chr5 (129-218)||(72038-72127)
chr5 (129-218)||(13135845-13135933)
chr5 (127-211)||(39060866-39060953)
chr5 (129-245)||(31196391-31196510)
chr5 (164-211)||(13016316-13016363)
chr5 (164-211)||(13087694-13087741)
chr5 (129-211)||(31090413-31090495)
chr5 (129-211)||(42819012-42819094)
chr5 (164-245)||(11099430-11099513)
chr5 (129-245)||(16926006-16926127)
chr5 (148-240)||(42158586-42158678)
chr5 (164-211)||(25344693-25344739)
chr5 (129-187)||(93462-93520)
chr5 (153-238)||(14183990-14184078)
chr5 (129-187)||(42211461-42211519)
chr5 (129-211)||(42575556-42575637)
chr5 (150-187)||(858467-858504)
chr5 (159-244)||(4576358-4576445)
chr5 (158-211)||(16883876-16883929)
chr5 (129-209)||(19817203-19817280)
chr5 (129-245)||(5357735-5357853)
chr5 (166-245)||(17741126-17741205)
chr5 (129-181)||(33012492-33012544)
chr5 (147-187)||(39183563-39183603)
[»] chr7 (33 HSPs)
chr7 (123-245)||(37264385-37264508)
chr7 (131-238)||(33773962-33774071)
chr7 (129-245)||(34064287-34064405)
chr7 (129-245)||(32776055-32776174)
chr7 (142-245)||(32346590-32346695)
chr7 (129-245)||(37496312-37496432)
chr7 (134-211)||(47238326-47238403)
chr7 (129-245)||(29996945-29997064)
chr7 (129-211)||(32971934-32972016)
chr7 (143-245)||(8150031-8150135)
chr7 (158-245)||(9658910-9658999)
chr7 (136-210)||(39143597-39143671)
chr7 (165-245)||(2849327-2849409)
chr7 (148-245)||(6697153-6697252)
chr7 (136-187)||(27234634-27234685)
chr7 (167-245)||(3667832-3667912)
chr7 (125-209)||(1643231-1643314)
chr7 (130-178)||(6591463-6591511)
chr7 (123-245)||(43007966-43008094)
chr7 (129-245)||(11616634-11616751)
chr7 (143-211)||(21446545-21446613)
chr7 (129-245)||(27337788-27337908)
chr7 (132-237)||(40023647-40023754)
chr7 (129-245)||(45218075-45218193)
chr7 (162-245)||(5724658-5724742)
chr7 (129-187)||(45890775-45890833)
chr7 (136-189)||(10355648-10355701)
chr7 (158-203)||(17494463-17494508)
chr7 (158-203)||(17558706-17558751)
chr7 (146-187)||(31549556-31549597)
chr7 (163-207)||(9602974-9603018)
chr7 (163-207)||(9830545-9830589)
chr7 (147-211)||(37490553-37490616)
[»] chr8 (36 HSPs)
chr8 (129-245)||(2195540-2195655)
chr8 (129-245)||(36011909-36012028)
chr8 (129-245)||(14690032-14690151)
chr8 (129-211)||(2797148-2797230)
chr8 (129-237)||(29451429-29451540)
chr8 (129-209)||(14748620-14748700)
chr8 (129-211)||(2875005-2875087)
chr8 (134-205)||(8840442-8840512)
chr8 (129-245)||(10728833-10728957)
chr8 (139-211)||(8566040-8566112)
chr8 (129-212)||(15020875-15020957)
chr8 (129-208)||(32231302-32231381)
chr8 (164-211)||(45420890-45420937)
chr8 (129-212)||(8418221-8418305)
chr8 (129-245)||(28791380-28791498)
chr8 (163-211)||(33743885-33743933)
chr8 (129-177)||(43844673-43844721)
chr8 (129-211)||(26677183-26677265)
chr8 (129-187)||(7042886-7042944)
chr8 (159-245)||(42412330-42412418)
chr8 (128-245)||(5392121-5392240)
chr8 (136-213)||(37219685-37219761)
chr8 (164-208)||(886399-886443)
chr8 (129-240)||(42558500-42558611)
chr8 (158-197)||(11637263-11637302)
chr8 (161-244)||(35150867-35150950)
chr8 (158-241)||(36610870-36610956)
chr8 (137-211)||(1494172-1494246)
chr8 (129-187)||(27973603-27973661)
chr8 (129-187)||(28030872-28030930)
chr8 (154-212)||(36649659-36649716)
chr8 (142-245)||(38201320-38201426)
chr8 (162-211)||(31410558-31410606)
chr8 (147-211)||(4480405-4480468)
chr8 (147-211)||(28802876-28802939)
chr8 (159-211)||(37703096-37703147)
[»] chr6 (14 HSPs)
chr6 (129-245)||(16126283-16126402)
chr6 (128-245)||(15371779-15371898)
chr6 (128-241)||(15325223-15325338)
chr6 (128-227)||(34803620-34803721)
chr6 (135-245)||(15355647-15355759)
chr6 (129-245)||(31075841-31075959)
chr6 (158-245)||(20383917-20384006)
chr6 (129-181)||(29444178-29444230)
chr6 (128-187)||(33921385-33921444)
chr6 (151-245)||(4238493-4238587)
chr6 (128-211)||(15321141-15321224)
chr6 (128-211)||(15351299-15351382)
chr6 (129-187)||(34703735-34703792)
chr6 (148-195)||(8045005-8045052)
[»] chr2 (41 HSPs)
chr2 (134-241)||(5425933-5426044)
chr2 (133-211)||(6972461-6972539)
chr2 (129-241)||(12949881-12949995)
chr2 (128-208)||(314539-314619)
chr2 (159-245)||(32556244-32556330)
chr2 (132-245)||(25604433-25604538)
chr2 (129-245)||(31592622-31592745)
chr2 (129-235)||(13026652-13026761)
chr2 (129-211)||(13222177-13222259)
chr2 (148-205)||(33045854-33045912)
chr2 (125-211)||(36748257-36748342)
chr2 (129-187)||(37528988-37529046)
chr2 (129-245)||(4282934-4283054)
chr2 (129-209)||(9724989-9725068)
chr2 (166-236)||(5007194-5007265)
chr2 (129-207)||(45464132-45464209)
chr2 (129-205)||(928455-928531)
chr2 (158-243)||(6075551-6075638)
chr2 (139-211)||(6213777-6213848)
chr2 (129-245)||(24356183-24356301)
chr2 (129-245)||(43182344-43182462)
chr2 (129-245)||(34235114-34235232)
chr2 (134-220)||(43427008-43427094)
chr2 (129-187)||(27001693-27001750)
chr2 (129-187)||(28527096-28527154)
chr2 (129-187)||(40711044-40711102)
chr2 (192-245)||(44424244-44424298)
chr2 (158-211)||(14384057-14384110)
chr2 (159-211)||(883100-883151)
chr2 (148-237)||(19264597-19264688)
chr2 (132-212)||(33880220-33880299)
chr2 (158-238)||(8385154-8385236)
chr2 (156-187)||(19031896-19031927)
chr2 (129-211)||(2048401-2048482)
chr2 (129-211)||(7213584-7213665)
chr2 (164-245)||(14890389-14890470)
chr2 (129-206)||(33275611-33275686)
chr2 (164-245)||(8550594-8550677)
chr2 (147-207)||(10069520-10069579)
chr2 (145-205)||(38872854-38872914)
chr2 (129-245)||(43077643-43077761)
[»] chr1 (60 HSPs)
chr1 (129-245)||(29225825-29225942)
chr1 (129-245)||(25983551-25983664)
chr1 (129-220)||(24131318-24131410)
chr1 (153-245)||(39420659-39420754)
chr1 (129-211)||(29756059-29756141)
chr1 (167-245)||(2571435-2571514)
chr1 (129-211)||(29225322-29225407)
chr1 (129-211)||(3160604-3160686)
chr1 (129-211)||(26583837-26583919)
chr1 (127-211)||(26924035-26924119)
chr1 (137-245)||(37541038-37541149)
chr1 (129-211)||(10587499-10587581)
chr1 (129-211)||(26760385-26760467)
chr1 (153-211)||(34332219-34332276)
chr1 (127-211)||(28424239-28424324)
chr1 (152-245)||(7224473-7224568)
chr1 (129-209)||(40988461-40988540)
chr1 (129-245)||(50926819-50926938)
chr1 (134-220)||(40754336-40754422)
chr1 (129-195)||(35622671-35622737)
chr1 (131-209)||(46363329-46363407)
chr1 (129-245)||(27831918-27832034)
chr1 (128-245)||(34813989-34814108)
chr1 (129-245)||(37495901-37496017)
chr1 (129-245)||(36326123-36326241)
chr1 (129-187)||(4466072-4466130)
chr1 (129-245)||(21304725-21304842)
chr1 (142-220)||(25418741-25418818)
chr1 (143-209)||(37925173-37925239)
chr1 (129-245)||(50086108-50086222)
chr1 (129-211)||(27932746-27932832)
chr1 (152-237)||(42309511-42309596)
chr1 (129-241)||(49662675-49662788)
chr1 (129-209)||(2886323-2886403)
chr1 (124-237)||(35946931-35947045)
chr1 (129-245)||(3718768-3718885)
chr1 (129-183)||(4933927-4933981)
chr1 (136-218)||(5503520-5503602)
chr1 (135-181)||(30903183-30903229)
chr1 (130-211)||(5040494-5040574)
chr1 (129-245)||(11425787-11425905)
chr1 (164-216)||(14090740-14090792)
chr1 (129-245)||(28706541-28706659)
chr1 (201-245)||(35622771-35622815)
chr1 (158-211)||(36037051-36037108)
chr1 (164-211)||(16956652-16956699)
chr1 (136-245)||(37280926-37281033)
chr1 (129-187)||(4659563-4659621)
chr1 (129-187)||(16040209-16040267)
chr1 (129-187)||(17342966-17343024)
chr1 (131-209)||(18186117-18186195)
chr1 (129-211)||(21304495-21304576)
chr1 (135-245)||(46273232-46273345)
chr1 (147-245)||(49945004-49945104)
chr1 (164-210)||(50773301-50773347)
chr1 (163-220)||(45049089-45049145)
chr1 (147-187)||(7785207-7785247)
chr1 (165-245)||(27209921-27210003)
chr1 (161-209)||(28908200-28908247)
chr1 (129-245)||(50267356-50267474)
[»] scaffold0576 (1 HSPs)
scaffold0576 (135-245)||(637-749)
[»] scaffold0578 (1 HSPs)
scaffold0578 (166-236)||(4413-4484)
[»] scaffold0221 (2 HSPs)
scaffold0221 (129-211)||(10706-10789)
scaffold0221 (164-210)||(5234-5280)
[»] scaffold0003 (1 HSPs)
scaffold0003 (129-245)||(352380-352496)
[»] scaffold0009 (1 HSPs)
scaffold0009 (129-209)||(220132-220212)
[»] scaffold0155 (1 HSPs)
scaffold0155 (129-245)||(7838-7955)
[»] scaffold0262 (1 HSPs)
scaffold0262 (129-245)||(12352-12471)
[»] scaffold0034 (1 HSPs)
scaffold0034 (159-211)||(98934-98985)
[»] scaffold0491 (1 HSPs)
scaffold0491 (158-245)||(11766-11859)
[»] scaffold0250 (1 HSPs)
scaffold0250 (129-211)||(20564-20645)


Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 245
Target Start/End: Original strand, 30261304 - 30261536
Alignment:
Q  13 cagaggatacaaagattatgatctcatatagtaaacacagcaccatactagaaagagagggtactcatgacaaccgacaatgaccaatgttatcaaacag 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30261304 cagaggatacaaagattatgatctcatatagtaaacacagcaccatactagaaagagagggtactcatgacaaccgacaatgaccaatgttatcaaacag 30261403  T
Q  113 ttgtactcttgttaactactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aa 210  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||  ||||||||||||||||  ||    
T  30261404 ttgtactcttgttaactactccctccgtcccattttaactgagccttttgttcatttcacgcatattaagaaagagtg--taagtgaaagagagagaaaa 30261501  T
Q  211 atagttttgactgtcttgtcaagtattggtgcatt 245  Q
    ||||||||||||| |||||||||||||||||||||    
T  30261502 atagttttgactggcttgtcaagtattggtgcatt 30261536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 245
Target Start/End: Complemental strand, 9218333 - 9218217
Alignment:
Q  130 actccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtctt 227  Q
    |||||||| ||| | ||||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||     
T  9218333 actccctctgtctcgttttatctgagtctttt-ttcttttcacacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtgtctc 9218235  T
Q  228 gtcaagtattggtgcatt 245  Q
    || |||||||||||||||    
T  9218234 gttaagtattggtgcatt 9218217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 124 - 245
Target Start/End: Original strand, 39329661 - 39329785
Alignment:
Q  124 ttaactactccctccgtcccattttaactgag-tcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagag--agagaaatagttttga 220  Q
    |||| ||||||||||||||| ||||| ||||| | |||| ||| ||||||||||||||||||||| || |||||||||||||  ||| ||||||||||||    
T  39329661 ttaaatactccctccgtcccgttttatctgagctttttttttcttttcacacatattaagaaaaaatgtataagtgaaagagaaagataaatagttttga 39329760  T
Q  221 ctgtcttgtcaagtattggtgcatt 245  Q
     |||||||| |||||||||||||||    
T  39329761 atgtcttgttaagtattggtgcatt 39329785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 44218951 - 44219068
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaag--agagagaaatagttttgactgtct 226  Q
    |||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||||||| |||||| ||||  ||||| |||| ||||||| |||||    
T  44218951 tactccctccgtcccataataacccagtcttttgttcatttcacacatattaagaaaaagtgtataagtcaaagaaagagaaaaatggttttgagtgtct 44219050  T
Q  227 tgtcaagtattggtgcatt 245  Q
    ||| |||| ||||||||||    
T  44219051 tgt-aagtgttggtgcatt 44219068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 7886269 - 7886157
Alignment:
Q  129 tactccctccgtcccattttaactgagtctttt-gttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtctt 227  Q
    |||||||||||||||||| ||| ||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||||| |||| ||||||| ||||||    
T  7886269 tactccctccgtcccattataagtgagtttttttgttcattttacacaaattaagaaaaagtgaataagtgaaagagagaaaaat-gttttgagtgtctt 7886171  T
Q  228 gtcaagtattggtg 241  Q
     |||  ||||||||    
T  7886170 ctcacttattggtg 7886157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 47684922 - 47684814
Alignment:
Q  138 cgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagag-agaaatagttttgactgtcttgtcaagtat 236  Q
    ||||||||  |||| |||||||||||||||||||||||||||||||||| ||| | |||||||||||||   |||| ||||||| ||| || ||||||||    
T  47684922 cgtcccataataaccgagtcttttgttcatttcacacatattaagaaaaggtgtacaagtgaaagagagttaaaatggttttgagtgttttatcaagtat 47684823  T
Q  237 tggtgcatt 245  Q
    |||||||||    
T  47684822 tggtgcatt 47684814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 1923275 - 1923188
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttt 217  Q
    ||||||||||||||||||||||||||| | || | ||||||||||| ||||||||||||||| |||||||||| ||||| |||| ||||    
T  1923275 tactccctccgtcccattttaactgagccctt-gctcatttcacacttattaagaaaaagtgtataagtgaaaaagagaaaaatggttt 1923188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 8769413 - 8769355
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  8769413 tactccttccgtcccattttaactgagttttttgttcatttcatacatattaagaaaaa 8769355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 39144851 - 39144770
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaaga-aaaagtgaataagtgaaagagagaga 209  Q
    ||||| |||| ||||||| ||| |||| ||||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  39144851 tactctctccatcccattataagtgagccttttgttcatttcacacatattaagaaaaaaatgtataagtgaaagagagaga 39144770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 24618850 - 24618926
Alignment:
Q  135 ctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||| |||||||||||||||  |||||| || |||||||| ||||||||||||||| ||||||||||| ||||||||    
T  24618850 ctccctcccattttaactgaaccttttgctcgtttcacacttattaagaaaaagtgtataagtgaaagggagagaaa 24618926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 53583477 - 53583595
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagag--agagaaatagttttgactgtct 226  Q
    |||||||||||| | ||| ||| |||||||||||| ||||||||   || |||||||||||| ||||  |||||||  ||| |||||||||||| ||| |    
T  53583477 tactccctccgttctattataagtgagtcttttgtccatttcacgtgtactaagaaaaagtgtataaaagaaagagatagaaaaatagttttgaatgtgt 53583576  T
Q  227 tgtcaagtattggtgcatt 245  Q
    |||||||||||| ||||||    
T  53583577 tgtcaagtattgatgcatt 53583595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 36315651 - 36315729
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagaga 207  Q
    |||||||||||||| ||| ||||| ||  ||||| ||||| ||||||||||||||||||||| |||||| |||||||||    
T  36315651 tactccctccgtcctattataactaagctttttgctcattccacacatattaagaaaaagtgtataagtaaaagagaga 36315729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 46194123 - 46194205
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||||| |||||||||| | ||   | ||||||||| ||||||||||||||| |||||| |||||||||||||    
T  46194123 tactccctccgtcccaatttaactgagcccttgactaatttcacacttattaagaaaaagtgtataagttaaagagagagaaa 46194205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 42547061 - 42547141
Alignment:
Q  167 tttcacacatattaagaaaaagtgaataagtgaaagagagagaaa--tagttttgactgtcttgtcaagtattggtgcatt 245  Q
    ||||||||||||||||||||| |  |||||| ||||||||| |||  ||||||||| |||||||| |||||||||||||||    
T  42547061 tttcacacatattaagaaaaaatttataagtaaaagagagaaaaaaatagttttgaatgtcttgttaagtattggtgcatt 42547141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 45267173 - 45267231
Alignment:
Q  162 gttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttga 220  Q
    |||||||||||||||||||||||||| || | |||||||||||||| | ||||||||||    
T  45267173 gttcatttcacacatattaagaaaaaatgtacaagtgaaagagagaaagatagttttga 45267231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 12745151 - 12745094
Alignment:
Q  130 actccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    ||||||||| ||||   |||||||||||||||| ||||||||||||||||||||||||    
T  12745151 actccctccatcccggattaactgagtcttttgctcatttcacacatattaagaaaaa 12745094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 2868746 - 2868683
Alignment:
Q  147 ttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||| |||| |||||||||||||||||||||||| || |||| |||| ||||||||||    
T  2868746 ttaactgagtcatttgctcatttcacacatattaagaaaaa-tgtataaatgaaggagagagaaa 2868683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 8764512 - 8764453
Alignment:
Q  129 tactccctccgtcccattttaactgagtctttt-gttcatttcacacatattaagaaaaa 187  Q
    |||||| ||||||| ||||||||||||| |||| |||||||||||| |||||||||||||    
T  8764512 tactccttccgtcctattttaactgagtttttttgttcatttcacaaatattaagaaaaa 8764453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 17776911 - 17776992
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||| |||||||||||  ||||||||||| |||| ||||||||||| |||||| ||||| || |||| |||| ||||||||||    
T  17776911 tacttcctccgtcccagattaactgagtcatttgctcatttcacacgtattaa-aaaaaatgtataaatgaatgagagagaaa 17776992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 19078212 - 19078293
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||| |||||||||||  ||||||||||| |||| ||||||||||| |||||| ||||| || |||| |||| ||||||||||    
T  19078212 tacttcctccgtcccagattaactgagtcatttgctcatttcacacgtattaa-aaaaaatgtataaatgaatgagagagaaa 19078293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 26479785 - 26479854
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtg 198  Q
    |||| |||||| | ||||||||||||| | || ||||||||||||| ||||||||||||||  |||||||    
T  26479785 tacttcctccgcctcattttaactgagcccttggttcatttcacacttattaagaaaaagtatataagtg 26479854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 46627847 - 46627899
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaa 181  Q
    ||||| |||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  46627847 tactctctccgtcccaatttaagtgagccttttgttcatttcacacttattaa 46627899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 51165142 - 51165024
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtc- 225  Q
    |||||||||||||| | ||||| |||| | |||  | |||||||||| |||||| ||||||| |||| | ||||||||||  ||||| |||||| ||||     
T  51165142 tactccctccgtccgagtttaattgagccattttctgatttcacacaaattaag-aaaagtgtataaataaaagagagagaaaaataattttgagtgtct 51165044  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    || |||||||||||||||||    
T  51165043 ttatcaagtattggtgcatt 51165024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 53051216 - 53051098
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtc- 225  Q
    |||||||||||| ||| ||||||||||||  || | ||||||||||| |||||| ||||||| ||||   ||||||||||  |||||||||||| || |     
T  53051216 tactccctccgttccagtttaactgagtcagttttccatttcacacagattaag-aaaagtgtataaagtaaagagagagaaaaatagttttgagtgcct 53051118  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    || ||||||||| |||||||    
T  53051117 ttttcaagtatttgtgcatt 53051098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 32172787 - 32172829
Alignment:
Q  164 tcatttcacacatattaagaaaaagtgaataagtgaaagagaga 207  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  32172787 tcatttcacacatattaag-aaaagtgaataaatgaaagagaga 32172829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 11528993 - 11529051
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    ||||| ||||||||||  ||||| ||| | |||| ||||||||||||||||||||||||    
T  11528993 tactctctccgtcccagattaaccgagccatttgctcatttcacacatattaagaaaaa 11529051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 34081017 - 34081079
Alignment:
Q  135 ctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagt 197  Q
    |||| ||||||||||||  |  |||||||| |||| |||||||||||||||||||| ||||||    
T  34081017 ctccatcccattttaacccaaacttttgtttattttacacatattaagaaaaagtgtataagt 34081079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 181
Target Start/End: Original strand, 40614069 - 40614099
Alignment:
Q  151 ctgagtcttttgttcatttcacacatattaa 181  Q
    |||||||||||||||||||||||||||||||    
T  40614069 ctgagtcttttgttcatttcacacatattaa 40614099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 245
Target Start/End: Complemental strand, 9017956 - 9017873
Alignment:
Q  164 tcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactg-tcttgtcaagtattggtgcatt 245  Q
    |||||||||||||||||| ||||| || |||| ||||||||||||  |||||||||| | || | |||| |||||||||||||||    
T  9017956 tcatttcacacatattaa-aaaaaatgtataaatgaaagagagagaaaaatagttttaagtgcttttgttaagtattggtgcatt 9017873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 14756032 - 14756089
Alignment:
Q  130 actccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||||||| |||| |  ||||||||||| |||| |||||| |||||||||||||||||    
T  14756032 actccctctgtcctagattaactgagtcatttgctcattttacacatattaagaaaaa 14756089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 1334710 - 1334816
Alignment:
Q  141 cccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtc-ttgtcaagtatt 237  Q
    |||| ||||| |||||| |||  |||||||||||| |||||| ||||| | |||| ||||||||||||  ||||| |||||| || | || |||||||||    
T  1334710 cccagtttaattgagtcattttctcatttcacacagattaag-aaaagcgtataaatgaaagagagagaaaaataattttgaatgcctttatcaagtatt 1334808  T
Q  238 ggtgcatt 245  Q
    ||||||||    
T  1334809 ggtgcatt 1334816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 187
Target Start/End: Original strand, 7673146 - 7673174
Alignment:
Q  159 tttgttcatttcacacatattaagaaaaa 187  Q
    |||||||||||||||||||||||||||||    
T  7673146 tttgttcatttcacacatattaagaaaaa 7673174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 46958910 - 46958794
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtcttg 228  Q
    ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||    
T  46958910 tactctctccgtccccttttaactgagtattttgttcatttcacacatattaagaaaaagtgtataagtgaaagatagagaaatagttttgagtgtcttg 46958811  T
Q  229 tcaagtattggtgcatt 245  Q
    | |||||| ||||||||    
T  46958810 ttaagtatcggtgcatt 46958794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 5499349 - 5499431
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||    
T  5499349 tactccctccgtcccattttaaccgagccttttgttcatttgacacatattaagaaaaagtgtataagtgaaagagaaagaaa 5499431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 28330985 - 28330903
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||||||||||||||| | ||   ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  28330985 tactccctccgtcccattttaactgagccattgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaa 28330903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 18872571 - 18872687
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtcttg 228  Q
    |||||| |||||| |||||||| |||   ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| |   |||| ||||||     
T  18872571 tactccatccgtctcattttaagtgaacattttgttcatttcacacgtattaagaaaaagtgtataagtgaaagagagcgaaaaatagttgagtgtctta 18872670  T
Q  229 tcaagtattggtgcatt 245  Q
    |||||||||| ||||||    
T  18872671 tcaagtattgatgcatt 18872687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 20964204 - 20964286
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgt-tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||||||||||||||| || |||  ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  20964204 tactccctccgtcccattttaactgag-ctcttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaa 20964286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 245
Target Start/End: Original strand, 29990402 - 29990507
Alignment:
Q  144 attttaactgagtcttttgttcatttcacacatattaag--aaaaagtgaataagtgaaagagag--agaaatagttttgactgtcttgtcaagtattgg 239  Q
    |||||||| ||||||||||||||||||||| ||||||||  ||||| || |||||||||||||||  | |||||| ||||| |||||||||||||||||     
T  29990402 attttaacggagtcttttgttcatttcacatatattaagataaaaaatgtataagtgaaagagagaaaaaaatagatttgagtgtcttgtcaagtattga 29990501  T
Q  240 tgcatt 245  Q
    ||||||    
T  29990502 tgcatt 29990507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 41594764 - 41594874
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtct 226  Q
    |||||||||||||||||| |||  ||| ||||||||||||||||| ||||| ||||||||||  ||||||||||||||||  |||| ||||||| || ||    
T  41594764 tactccctccgtcccattataagcgagccttttgttcatttcacatatattgagaaaaagtgtttaagtgaaagagagagaaaaatggttttgagtgcct 41594863  T
Q  227 tgtcaagtatt 237  Q
    |||||| ||||    
T  41594864 tgtcaaatatt 41594874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 35027420 - 35027532
Alignment:
Q  135 ctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtg--aaagagagagaaatagttttgactgtcttgtcaa 232  Q
    |||| ||| ||||||||||||| ||||||| |||||||||||||||| |||||||| |||| ||  |||| |||| ||||| |||| | |||||||||||    
T  35027420 ctccatcctattttaactgagtattttgtttatttcacacatattaaaaaaaagtgtataattgaaaaagggagaaaaataattttaaatgtcttgtcaa 35027519  T
Q  233 gtattggtgcatt 245  Q
     ||||||||||||    
T  35027520 atattggtgcatt 35027532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 54217562 - 54217480
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||||||||||| | | ||||   |||||||| || ||||||||||||||| ||||||||||||||||||||    
T  54217562 tactccctccgtcccattttaacggggcctttgactcatttcatacttattaagaaaaagtgtataagtgaaagagagagaaa 54217480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 25902377 - 25902453
Alignment:
Q  128 ctactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagag 204  Q
    ||||| ||||||||||||  ||||||||  ||||  ||||||||||||||||||||||||||| |||||||||||||    
T  25902377 ctacttcctccgtcccataataactgagcattttcctcatttcacacatattaagaaaaagtgtataagtgaaagag 25902453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 245
Target Start/End: Complemental strand, 13530023 - 13529934
Alignment:
Q  158 ttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtcttgtcaagtattggtgcatt 245  Q
    |||| ||||||||||||||||||||||||| || | ||| |||||||||||  |||| ||||||| |||||||| || ||||||||||||    
T  13530023 ttttattcatttcacacatattaagaaaaaatgtacaagcgaaagagagagaaaaatggttttgagtgtcttgtgaactattggtgcatt 13529934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 245
Target Start/End: Original strand, 22872296 - 22872423
Alignment:
Q  122 tgttaactactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtga--aagagagagaaatagttttg 219  Q
    ||||| |||||||||||||||||  |||| |||| | |||| |||||||||||||||||||||||| || ||||||||  |||||||| |||| |||||     
T  22872296 tgttagctactccctccgtcccaaattaagtgagccatttgctcatttcacacatattaagaaaaa-tgtataagtgaagaagagagaaaaatggtttta 22872394  T
Q  220 actg-tc--ttgtcaagtattggtgcatt 245  Q
    | || ||  ||||||||||||||||||||    
T  22872395 agtgctcgtttgtcaagtattggtgcatt 22872423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 22129033 - 22129122
Alignment:
Q  157 cttttgttcatttcacacatattaagaaaaa-gtgaataagtgaaagagagagaaatagttttgactgtcttgtcaagtattggtgcatt 245  Q
    ||||||||||||||||||||||||||||||  ||  | |||| ||||||||||||||  |||||| | ||||||||| ||||||||||||    
T  22129033 cttttgttcatttcacacatattaagaaaattgtatacaagtaaaagagagagaaatgattttgagtatcttgtcaactattggtgcatt 22129122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 47277593 - 47277672
Alignment:
Q  126 aactactccctccgtcccatttta--actgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaaga 203  Q
    ||||||||||||||||||||| ||  | |||| |||||| |||||||||||||||||||||||| || |||||| |||||    
T  47277593 aactactccctccgtcccattatataagtgagccttttgctcatttcacacatattaagaaaaaatgtataagtaaaaga 47277672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 32949763 - 32949846
Alignment:
Q  128 ctactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||| ||||||||||||||||| ||||   ||||||||||| |||||| |||||||| |||| ||||| ||| |||||    
T  32949763 ctactccctctgtcccattttaactgagcctttgactcatttcacacttattaaaaaaaagtgtataaatgaaatagatagaaa 32949846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 37315838 - 37315920
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaag-aaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||| |||||| |||| |||| | |||||| |||| ||||||| |||||||| ||||||||||||||||||||    
T  37315838 tactccctccgtcccgttttaattgagactttggctcatttaacacttattaagaaaaaagtg-ataagtgaaagagagagaaa 37315920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 42132971 - 42132924
Alignment:
Q  164 tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  42132971 tcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaa 42132924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 49218734 - 49218781
Alignment:
Q  164 tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  49218734 tcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaa 49218781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 8759970 - 8759888
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||| ||||||||||||| ||  |||||  |||||||| || |||||| |||||||| |||| |||||||||||||||    
T  8759970 tactccctctgtcccattttaaccgaaccttttactcatttcaaacttattaaaaaaaagtgtataaatgaaagagagagaaa 8759888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 38838791 - 38838693
Alignment:
Q  153 gagtcttttgttcatttcacacatat--taagaaaaagtgaataagtgaaaga----gagagaaatagttttgactgtcttgtcaagtattggtgcatt 245  Q
    |||||||||| |||||||||||||||  ||||||||||||  |||||||||||    |||| |||| ||||| | ||| ||||||||||||||||||||    
T  38838791 gagtcttttgctcatttcacacatatattaagaaaaagtgtctaagtgaaagataaagagaaaaattgttttaagtgtgttgtcaagtattggtgcatt 38838693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 48400548 - 48400629
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||| | ||||| |||||| |||  |||||||||||| ||||||||||| || |||| |||||||||||||||    
T  48400548 tactccctccgtcctagtttaattgagtcattttctcatttcacacagattaagaaaaa-tgtataaatgaaagagagagaaa 48400629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 44633346 - 44633228
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaag--agagagaaatagttttgactgtc- 225  Q
    |||||||||||||||| |||||||||| |  || | ||||||||||| |||||| | ||||| ||||   ||||  ||||| |||||||||||| ||||     
T  44633346 tactccctccgtcccagtttaactgagccaattttccatttcacacagattaag-ataagtgtataaagaaaagaaagagaaaaatagttttgagtgtct 44633248  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    ||||||||||||||||||||    
T  44633247 ttgtcaagtattggtgcatt 44633228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 47386156 - 47386217
Alignment:
Q  140 tcccattttaactgagtcttttgttcatttcacac----atattaagaaaaagtgaataagt 197  Q
    ||||||| ||||||||| |||||||||||||||||    |||||||||||||||||||||||    
T  47386156 tcccattataactgagttttttgttcatttcacacatatatattaagaaaaagtgaataagt 47386217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 8295219 - 8295138
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||| ||||   ||||||||| | |||| |||||||||||| ||||||||||| || |||| |||||||||||||||    
T  8295219 tactccctccatcccggattaactgagccatttgctcatttcacacaaattaagaaaaa-tgtataaatgaaagagagagaaa 8295138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 1920890 - 1920845
Alignment:
Q  158 ttttgttcatttcacacatattaagaaaaagtgaataagtgaaaga 203  Q
    |||| ||||||||||||||||||||||||| || ||||||||||||    
T  1920890 ttttattcatttcacacatattaagaaaaaatgtataagtgaaaga 1920845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 38320065 - 38320020
Alignment:
Q  166 atttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||||    
T  38320065 atttcacatttattaagaaaaagtgtataagtgaaagagagagaaa 38320020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 43125990 - 43125879
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttg-ttcatttcacacatattaagaaaaagtgaataagtgaaagag--agagaaatagttttgactgtc 225  Q
    |||||| | ||||||||||||||| || |||||| ||||||||||||||||||| ||||| || |||||  ||||||  ||| ||||| |||| | |||     
T  43125990 tactccattcgtcccattttaactaag-cttttgattcatttcacacatattaaaaaaaaatgtataagcaaaagagaaagaaaaataattttaaatgtt 43125892  T
Q  226 ttgtcaagtattg 238  Q
    |||||||||||||    
T  43125891 ttgtcaagtattg 43125879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 4360343 - 4360383
Alignment:
Q  147 ttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  4360343 ttaactgagccatttgttcatttcacacatattaagaaaaa 4360383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 10309195 - 10309254
Alignment:
Q  154 agtcttttgttcatttcacacatat--taagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||||||||||||||  |||||||||||| |||| | ||||| |||||||    
T  10309195 agtcttttgttcatttcacacatataataagaaaaagtgtataaattaaagaaagagaaa 10309254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 28280027 - 28279909
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagag--agagaaatagttttgactgtc- 225  Q
    |||| ||||||||||| |||||||||| |  || | ||||||||| | ||||||||||| || ||||   ||||||  |||||||||||||||| ||||     
T  28280027 tacttcctccgtcccagtttaactgagccaattttccatttcacagagattaagaaaaa-tgtataaagaaaagagaaagagaaatagttttgagtgtct 28279929  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    |||| |||||||||||||||    
T  28279928 ttgttaagtattggtgcatt 28279909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 32324453 - 32324369
Alignment:
Q  127 actactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||| ||||| ||| ||| ||||  ||||||| ||||| |||||||||||||||| |  | |||||||| |||||||||    
T  32324453 actactcccttcgtcctattataagtgagcattttgttaatttcgcacatattaagaaaaaatatacaagtgaaatagagagaaa 32324369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 11583640 - 11583699
Alignment:
Q  128 ctactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||||| ||||||||||||||| ||||| |||| | ||||||||||  ||||||||||||    
T  11583640 ctactctctccgtcccattttagctgagcctttggctcatttcacatttattaagaaaaa 11583699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 240
Target Start/End: Complemental strand, 21241066 - 21240970
Alignment:
Q  147 ttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag---aaatagttttgactg-tcttgtcaagtattggt 240  Q
    |||| |||||| ||||||||||| | ||||||||||||||| || ||| ||||| |||||||   |||||||||| | || |||||||||||||||||    
T  21241066 ttaagtgagtcatttgttcatttgaaacatattaagaaaaa-tgtataggtgaaggagagagaaaaaatagttttaagtgctcttgtcaagtattggt 21240970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 39976311 - 39976366
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaa 184  Q
    |||||||| ||||||   ||||||||||| ||||||||||||| ||||||||||||    
T  39976311 tactcccttcgtcccggattaactgagtcatttgttcatttcatacatattaagaa 39976366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 53848834 - 53848759
Alignment:
Q  132 tccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagaga 207  Q
    |||||| ||| |||||||| ||||  ||| |||||||||||   ||||||||||||||| ||||||| ||||||||    
T  53848834 tccctcggtctcattttaattgagcttttggttcatttcacgtttattaagaaaaagtgtataagtgtaagagaga 53848759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 4486019 - 4485946
Alignment:
Q  166 atttcacacatattaagaaaaagtgaataagtgaaag--agagagaaatagttttgactgtcttgtcaagtatt 237  Q
    |||||||| ||||||||||||| |  |||||||||||  ||||| |||||||||||| ||| ||||||| ||||    
T  4486019 atttcacaaatattaagaaaaaatatataagtgaaagaaagagaaaaatagttttgagtgttttgtcaaatatt 4485946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 30680355 - 30680412
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaa 186  Q
    ||||||||||||| || ||| ||||||||  ||| | |||||||||||||||||||||    
T  30680355 tactccctccgtctcagtttgactgagtcggttgattatttcacacatattaagaaaa 30680412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 35594707 - 35594674
Alignment:
Q  18 gatacaaagattatgatctcatatagtaaacaca 51  Q
    |||||||||||||| |||||||||||||||||||    
T  35594707 gatacaaagattataatctcatatagtaaacaca 35594674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 38614894 - 38614998
Alignment:
Q  133 ccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtcttgtcaa 232  Q
    ||||| ||||||||||| ||||| ||||| ||| |||| |||||||||||||||| |||   || |||| |     |||||||||||| |||||||| ||    
T  38614894 ccctcagtcccattttatctgag-cttttattcttttcgcacatattaagaaaaaatgag--agagaaaaa-----aaatagttttgagtgtcttgttaa 38614985  T
Q  233 gtattggtgcatt 245  Q
    |||||||||||||    
T  38614986 gtattggtgcatt 38614998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 3502993 - 3503057
Alignment:
Q  148 taactgagtcttttgttcatttcacacatattaag-aaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||  |||| ||||||||||| |||||||| ||||| || |||||||||||| |||||||    
T  3502993 taactgagcattttattcatttcacaaatattaagaaaaaaatgtataagtgaaagaaagagaaa 3503057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 9778852 - 9778908
Alignment:
Q  130 actccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaa 186  Q
    |||| |||||||||| ||||| ||| | |||| |||||||||||| |||||||||||    
T  9778852 actctctccgtcccaatttaaatgattttttttttcatttcacacttattaagaaaa 9778908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 12619847 - 12619796
Alignment:
Q  159 tttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||| || |||||||||||| || ||||||||||||| ||||||    
T  12619847 tttgttcatttcatacttattaagaaaaa-tgtataagtgaaagagcgagaaa 12619796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 14452100 - 14452064
Alignment:
Q  152 tgagtcttttgttcatttcacacatattaagaaaaag 188  Q
    |||||| |||||||||||||||| |||||||||||||    
T  14452100 tgagtcatttgttcatttcacacttattaagaaaaag 14452064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 187
Target Start/End: Original strand, 27790368 - 27790396
Alignment:
Q  159 tttgttcatttcacacatattaagaaaaa 187  Q
    |||||||||||||||||||||||||||||    
T  27790368 tttgttcatttcacacatattaagaaaaa 27790396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 211
Target Start/End: Original strand, 39258205 - 39258268
Alignment:
Q  147 ttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||| |||||| |||| | |||||||||||||||| ||||| || ||||||||| ||||||||||    
T  39258205 ttaattgagtcatttgcttatttcacacatattaa-aaaaaatgtataagtgaatgagagagaaa 39258268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 49449004 - 49448913
Alignment:
Q  154 agtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaata--gttttgactg-tcttgtcaagtattggtgcatt 245  Q
    |||| |||||||||||||||  |||||||||||| || ||||||||| |||||||||| |  ||||| | || |||||||||||||| |||||||    
T  49449004 agtcatttgttcatttcaca--tattaagaaaaa-tgtataagtgaaggagagagaaaaatggttttaagtgctcttgtcaagtatttgtgcatt 49448913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 6629316 - 6629428
Alignment:
Q  132 tccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtcttgtca 231  Q
    |||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||||| |||| ||||||||||| |||||||||||| ||||||||||    
T  6629316 tccctccgtcccattttatctgagcctttttttcttttcacacatattaagaaaaagtgtataaatgaaagagaga-aaatagttttgagtgtcttgtca 6629414  T
Q  232 agtattggtgcatt 245  Q
    ||||||||||||||    
T  6629415 agtattggtgcatt 6629428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 245
Target Start/End: Original strand, 25111066 - 25111184
Alignment:
Q  128 ctactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtc-t 226  Q
    |||||||||| |||||||| ||| ||||  ||||| ||||||||||||||||||||||| | | | |||||||||||||| |||||||||||| |||| |    
T  25111066 ctactccctctgtcccattataagtgagcattttgctcatttcacacatattaagaaaaggagtaaaagtgaaagagagaaaaatagttttgagtgtctt 25111165  T
Q  227 tgtcaagtattggtgcatt 245  Q
    |||||||||||| ||||||    
T  25111166 tgtcaagtattgctgcatt 25111184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 245
Target Start/End: Original strand, 25170157 - 25170275
Alignment:
Q  128 ctactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtc-t 226  Q
    |||||||||| |||||||| ||| ||||  ||||| ||||||||||||||||||||||| | | | |||||||||||||| |||||||||||| |||| |    
T  25170157 ctactccctctgtcccattataagtgagcattttgctcatttcacacatattaagaaaaggagtaaaagtgaaagagagaaaaatagttttgagtgtctt 25170256  T
Q  227 tgtcaagtattggtgcatt 245  Q
    |||||||||||| ||||||    
T  25170257 tgtcaagtattgctgcatt 25170275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 39212472 - 39212586
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtcttg 228  Q
    |||||||||||||||||  ||||   |||||||||||||||||| |||||||||||||| || |||||||||||||||| ||||  | |||| || ||||    
T  39212472 tactccctccgtcccataataaccatgtcttttgttcatttcacgcatattaagaaaaattgtataagtgaaagagagaaaaat--tgttgagtgccttg 39212569  T
Q  229 tcaagtattggtgcatt 245  Q
    |||||||||||||||||    
T  39212570 tcaagtattggtgcatt 39212586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 15564810 - 15564892
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||| ||||| |||||||||| |||||||||| | ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  15564810 tacttcctccatcccattttagctgagtctttcgctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaa 15564892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 127 - 245
Target Start/End: Complemental strand, 35988826 - 35988706
Alignment:
Q  127 actactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaa--agagagagaaatagttttgactgt 224  Q
    |||||||||||||| || |||||| |||  ||||| ||||||||||| ||||||||||||| |  |||||||||  ||||||| |||||||||| | |||    
T  35988826 actactccctccgttccgttttaaatgaacctttttttcatttcacatatattaagaaaaaatttataagtgaaacagagagaaaaatagttttaagtgt 35988727  T
Q  225 cttgtcaagtattggtgcatt 245  Q
     ||||||||||||||||||||    
T  35988726 gttgtcaagtattggtgcatt 35988706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 5147413 - 5147495
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||| |  |||||||||||| |||||||    
T  5147413 tactccctccgtcccattttaactgagtctttgactcatttcacacttattaagaaaaaatatataagtgaaagaaagagaaa 5147495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 25108763 - 25108645
Alignment:
Q  128 ctactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtc-t 226  Q
    |||||||||| |||||||| ||| ||||  ||||  ||||||||||||||||||||||| | | | |||||||||||||| |||||||||||| |||| |    
T  25108763 ctactccctctgtcccattataagtgagcatttttctcatttcacacatattaagaaaaggagtaaaagtgaaagagagaaaaatagttttgagtgtctt 25108664  T
Q  227 tgtcaagtattggtgcatt 245  Q
    ||| |||||||| ||||||    
T  25108663 tgttaagtattgctgcatt 25108645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 25167855 - 25167737
Alignment:
Q  128 ctactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtc-t 226  Q
    |||||||||| |||||||| ||| ||||  ||||  ||||||||||||||||||||||| | | | |||||||||||||| |||||||||||| |||| |    
T  25167855 ctactccctctgtcccattataagtgagcatttttctcatttcacacatattaagaaaaggagtaaaagtgaaagagagaaaaatagttttgagtgtctt 25167756  T
Q  227 tgtcaagtattggtgcatt 245  Q
    ||| |||||||| ||||||    
T  25167755 tgttaagtattgctgcatt 25167737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 4475434 - 4475318
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgt-ctt 227  Q
    ||||| |||||||||||  ||| ||||  ||||||||||| ||||||||||||| ||||||| |||||||||||| ||||||| | | |||| ||| |||    
T  4475434 tactctctccgtcccataataagtgagcattttgttcattgcacacatattaag-aaaagtgtataagtgaaagaaagagaaaaattgttgagtgtcctt 4475336  T
Q  228 gtcaagtattggtgcatt 245  Q
    ||||||||||||||||||    
T  4475335 gtcaagtattggtgcatt 4475318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 15898668 - 15898610
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||    
T  15898668 tactccctccgtcccattttaaatgagtctttagttcatttcacacttattaagaaaaa 15898610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 38979095 - 38979013
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||||||||||||||| | |||  ||||||||||| ||||||||||||||| | ||| |||||||| |||||    
T  38979095 tactccctccgtcccattttaactgagccatttactcatttcacacttattaagaaaaagtgtacaagggaaagagatagaaa 38979013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 22983134 - 22983076
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||    
T  22983134 tactccctccgtcccattttaactaaacattttgttcatttcacacatattaagaaaaa 22983076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 72038 - 72127
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagtttt 218  Q
    |||||||||||||||||||||||||||  || ||||||||||||||  ||||||||||| || | |||| ||||| ||||  ||||||||||    
T  72038 tactccctccgtcccattttaactgaggtttatgttcatttcacac--attaagaaaaaatgtacaagtaaaagaaagagtaaaatagtttt 72127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 13135933 - 13135845
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagtttt 218  Q
    ||||| ||||||||||  ||||| ||||| |||||||||||||||| ||||||| |||| || |||| |||| ||||||||||| |||||    
T  13135933 tactcactccgtcccaaattaacagagtcatttgttcatttcacacgtattaag-aaaactgtataaatgaaggagagagaaatggtttt 13135845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 39060866 - 39060953
Alignment:
Q  127 actactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagt---gaataagtgaaagagagagaaa 211  Q
    |||||||||||||||||||||||| | || ||||   ||||||||||| |||||||||||| |   | ||||||||||||||||||||    
T  39060866 actactccctccgtcccattttaatttagactttgactcatttcacacttattaagaaaaaatgtagtataagtgaaagagagagaaa 39060953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 31196510 - 31196391
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagag--agagaaatagttttgactgt-c 225  Q
    |||| ||||||||||||||||||||| |  || | ||||||||||| |||||||||||  || |||| ||||||||  ||| |||||||||||| ||| |    
T  31196510 tacttcctccgtcccattttaactgaattcttggctcatttcacacttattaagaaaatatgtataaatgaaagagatagaaaaatagttttgagtgtcc 31196411  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    ||||||  ||||| ||||||    
T  31196410 ttgtcatttattgctgcatt 31196391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 13016316 - 13016363
Alignment:
Q  164 tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||    
T  13016316 tcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaa 13016363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 13087694 - 13087741
Alignment:
Q  164 tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||    
T  13087694 tcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaa 13087741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 31090495 - 31090413
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||| || |||||||||||||||| ||   |||||| |||  |||||||||||| || |||||||||| |||||||||    
T  31090495 tactccctcagttccattttaactgagtccttgactcattttacatttattaagaaaaaatgtataagtgaaaaagagagaaa 31090413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 42819094 - 42819012
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||| |||||||||||||| || |||  ||   ||||||||||| ||||||||||||||| |||||| ||||||| |||||    
T  42819094 tactccttccgtcccattttaccttagttattgactcatttcacacttattaagaaaaagtgtataagtaaaagagaaagaaa 42819012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 245
Target Start/End: Original strand, 11099430 - 11099513
Alignment:
Q  164 tcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactg-tcttgtcaagtattggtgcatt 245  Q
    |||||||||||||||||||||||| || |||| ||||||||||||  |||||||||| | || | |||| |||||||||||||||    
T  11099430 tcatttcacacatattaagaaaaa-tgtataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattggtgcatt 11099513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 16926006 - 16926127
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagt---gaataagtgaaaga--gagagaaatagttttgactg 223  Q
    |||||||||||||||||| ||| |||  |||||| |||||||||||||||||| || ||||   | ||||||||||||  |||| |||| ||||||| ||    
T  16926006 tactccctccgtcccattataattgacccttttgctcatttcacacatattaa-aagaagtgtagtataagtgaaagagtgagaaaaatggttttgagtg 16926104  T
Q  224 tctt-gtcaagtattggtgcatt 245  Q
     ||| || |||||||||||||||    
T  16926105 ccttcgttaagtattggtgcatt 16926127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 42158586 - 42158678
Alignment:
Q  148 taactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaat-agttttgactgtcttgtcaagtattggt 240  Q
    ||||||||| |||  ||||||||| ||||||||| |||||||| |||||||||||||| | |||| |||||||| ||| || | ||||||||||    
T  42158586 taactgagtttttcattcatttcatacatattaa-aaaaagtgtataagtgaaagagaaaaaaatgagttttgagtgtgttcttaagtattggt 42158678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 25344693 - 25344739
Alignment:
Q  164 tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||| ||||||||| || ||||||||||||||||||||    
T  25344693 tcatttcacacatactaagaaaaa-tgtataagtgaaagagagagaaa 25344739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 93520 - 93462
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||||||||| || |||||||| ||||||||||  ||||||||||  ||||||||||||    
T  93520 tactccctccatcacattttaaatgagtcttttactcatttcacatctattaagaaaaa 93462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 14183990 - 14184078
Alignment:
Q  153 gagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagag---agaaatagttttgactgtcttgtcaagtattg 238  Q
    ||||||||| |||||||  |||||||| |||| || || |||||||||||||||   | |||||||||||| | ||||||||| |||||    
T  14183990 gagtcttttattcattttgcacatatttagaagaaatgtataagtgaaagagagataaaaaatagttttgagtttcttgtcaaatattg 14184078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 42211519 - 42211461
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    ||||||||| ||||||  ||||| ||||| |||| |||||||||||||||||| |||||    
T  42211519 tactccctctgtcccaaattaaccgagtcatttgctcatttcacacatattaaaaaaaa 42211461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 42575556 - 42575637
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||||   ||| ||||| | ||| ||||||||||||||||||||| ||| || |||| |||| ||||||||||    
T  42575556 tactccctccgtcccgaattagctgagccattttttcatttcacacatattaagacaaa-tgtataaatgaatgagagagaaa 42575637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 858504 - 858467
Alignment:
Q  150 actgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  858504 actgagtcatttgctcatttcacacatattaagaaaaa 858467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 4576358 - 4576445
Alignment:
Q  159 tttgttcatttcacacatattaagaaaaagtgaataagtg--aaagagagagaaatagttttgactg-tcttgtcaagtattggtgcat 244  Q
    |||| |||||||||||||||||||||||| || |||| ||  ||| ||||| ||| |||||| | || |||||||||||||||||||||    
T  4576358 tttgctcatttcacacatattaagaaaaa-tgtataaatgaaaaaaagagaaaaacagttttaagtgttcttgtcaagtattggtgcat 4576445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 16883876 - 16883929
Alignment:
Q  158 ttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||  |||||||||||||| |  || |||||||||||||||||    
T  16883876 ttttgttcatttcatgcatattaagaaaaaatttatgagtgaaagagagagaaa 16883929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 19817280 - 19817203
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagaga 209  Q
    ||||||||||||||||  |||| |||| | |||| | |||||||||  ||||||||||| || ||||||||||||||||||    
T  19817280 tactccctccgtcccaaattaagtgagccatttgattatttcacac--attaagaaaaa-tgtataagtgaaagagagaga 19817203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 5357735 - 5357853
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaa--agagagagaaatagttttgactgtc- 225  Q
    |||||||||||||||| ||||| |||  | |||| ||||| ||||| |||||||||||| |  || ||||||  ||||||| |||| ||||||| ||||     
T  5357735 tactccctccgtcccaatttaattgaaccatttgctcattacacacttattaagaaaaa-tatattagtgaaggagagagaaaaatggttttgagtgtct 5357833  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    |||| |||||||||| ||||    
T  5357834 ttgttaagtattggttcatt 5357853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 17741126 - 17741205
Alignment:
Q  166 atttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtc-ttgtcaagtattggtgcatt 245  Q
    |||| ||||| ||||| |||||||| |||| ||||||||||| |||||||||||| || | |||| |||||||| ||||||    
T  17741126 attttacacagattaa-aaaaagtgtataaatgaaagagagaaaaatagttttgagtgcctttgttaagtattgatgcatt 17741205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 33012544 - 33012492
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaa 181  Q
    |||||||||||||||   ||||||||||| |||| |||||||| |||||||||    
T  33012544 tactccctccgtcccggattaactgagtcatttgctcatttcatacatattaa 33012492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 39183563 - 39183603
Alignment:
Q  147 ttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||| |||||| ||||| |||||||||||||||||||||||    
T  39183563 ttaagtgagtcatttgtccatttcacacatattaagaaaaa 39183603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 123 - 245
Target Start/End: Complemental strand, 37264508 - 37264385
Alignment:
Q  123 gttaactactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgact 222  Q
    ||||| |||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||| |    
T  37264508 gttaattactccctccgtcccattttaagtgagccttttgctcatttcacacatattaagaaaaagtatataagtgaaagagagaaaaatggttttgagt 37264409  T
Q  223 g-tcttgtcaagtattggtgcatt 245  Q
    |  |||||||||||||| ||||||    
T  37264408 gcccttgtcaagtattgatgcatt 37264385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 33773962 - 33774071
Alignment:
Q  131 ctccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtcttg 228  Q
    ||||||||||||||||||||||||   |||  ||||||||||| |||||||||||||||| |||||||||||||||||  |||||||||||| |||||||    
T  33773962 ctccctccgtcccattttaactgaacttttaattcatttcacatatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtgtcttg 33774061  T
Q  229 tcaagtattg 238  Q
    | ||||||||    
T  33774062 ttaagtattg 33774071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 34064405 - 34064287
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaa--agagagagaaatagttttgactgtct 226  Q
    |||||||||| |||| ||||| ||||| ||||| ||| ||||||||||||||| |||||||| |||| ||||  ||||||| |||||||||||| |||||    
T  34064405 tactccctccctcccgttttatctgagcctttttttcttttcacacatattaaaaaaaagtgtataaatgaaatagagagaaaaatagttttgagtgtct 34064306  T
Q  227 tgtcaagtattggtgcatt 245  Q
    ||| |||||||||||||||    
T  34064305 tgttaagtattggtgcatt 34064287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 32776174 - 32776055
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaa--agagagagaaatagttttgactgtc- 225  Q
    |||||||||||| ||||| ||| |||| |||||| ||||||||||||||||||||||||||| |||||||||  ||||||| |||| ||||||| || |     
T  32776174 tactccctccgttccattataaatgagccttttgctcatttcacacatattaagaaaaagtgtataagtgaaggagagagaaaaatggttttgagtgcct 32776075  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    |||| |||||||||||||||    
T  32776074 ttgttaagtattggtgcatt 32776055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 245
Target Start/End: Complemental strand, 32346695 - 32346590
Alignment:
Q  142 ccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaag--agagagaaatagttttgactgtcttgtcaagtattgg 239  Q
    ||||| ||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||||| |||||||||| || |||||||  ||| ||    
T  32346695 ccattataattgagtattttgttcatttcacacatattaagaaaaagtaaataagtgaaagacagagagagatagttttgagtgacttgtcatttatcgg 32346596  T
Q  240 tgcatt 245  Q
    ||||||    
T  32346595 tgcatt 32346590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 37496312 - 37496432
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaa----agagagagaaatagttttgactgt 224  Q
    ||||||||||||||| ||||| |||| | |||| ||| ||| |||||||||||||||||||| |||||||||    ||||||||| |||||||||| | |    
T  37496312 tactccctccgtcccgttttatctgattttttttttctttttacacatattaagaaaaagtgtataagtgaaagagagagagagagatagttttgagtat 37496411  T
Q  225 cttgtcaagtattggtgcatt 245  Q
    ||||| ||||||| |||||||    
T  37496412 cttgttaagtatttgtgcatt 37496432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 47238403 - 47238326
Alignment:
Q  134 cctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||| |||||||||| ||||| || | ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  47238403 cctccgttccattttaaccgagtcattggctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaa 47238326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 29996945 - 29997064
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagag--agagaaatagttttgactgt-c 225  Q
    |||| ||||||||| |||||||||||| ||||   ||||||||||| ||||||||||||||| |||||||||||||  ||| |||| ||||||| ||| |    
T  29996945 tacttcctccgtcctattttaactgagcctttgactcatttcacacttattaagaaaaagtgtataagtgaaagagaaagaaaaatggttttgaatgtcc 29997044  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    |||| || ||||||||||||    
T  29997045 ttgttaattattggtgcatt 29997064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 32971934 - 32972016
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||| ||||||||| |||||| ||   ||||||||||| |||||||||||| || ||||||||||||||||||||    
T  32971934 tactccctccgttccattttaattgagtcattgactcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaa 32972016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 245
Target Start/End: Complemental strand, 8150135 - 8150031
Alignment:
Q  143 cattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtcttgtcaagtattggt 240  Q
    |||| ||| ||| |||| ||||||||||||||||||||||||||| || |||||||||||||||||  |||| ||||| | ||| ||||||| |||| ||    
T  8150135 cattataaatgaatcttgtgttcatttcacacatattaagaaaaaatgtataagtgaaagagagagaaaaatggttttaagtgttttgtcaaatatttgt 8150036  T
Q  241 gcatt 245  Q
    |||||    
T  8150035 gcatt 8150031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 245
Target Start/End: Complemental strand, 9658999 - 9658910
Alignment:
Q  158 ttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtcttgtcaagtattggtgcatt 245  Q
    |||| ||||||||||||||||||||||||| || | ||| |||||||||||  |||| ||||||| |||||||| || ||||||||||||    
T  9658999 ttttattcatttcacacatattaagaaaaaatgtacaagcgaaagagagagaaaaatggttttgagtgtcttgtgaactattggtgcatt 9658910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 39143597 - 39143671
Alignment:
Q  136 tccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaa 210  Q
    ||||||||||| ||| ||||||||||| ||||||||||| ||| ||||||||||| ||| |||||| ||||||||    
T  39143597 tccgtcccattataagtgagtcttttgctcatttcacacgtataaagaaaaagtgtatatgtgaaatagagagaa 39143671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 245
Target Start/End: Complemental strand, 2849409 - 2849327
Alignment:
Q  165 catttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtc-ttgtcaagtattggtgcatt 245  Q
    ||||||||||||||||||||||| || |||| ||||||||||||  |||||||||||  |||| ||||||||||||||||||||    
T  2849409 catttcacacatattaagaaaaa-tgtataaatgaaagagagagaaaaatagttttgcgtgtctttgtcaagtattggtgcatt 2849327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 6697252 - 6697153
Alignment:
Q  148 taactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaag--agagagaaatagttttgactgtcttgtcaagtattggtgcatt 245  Q
    |||| |||| ||||||||||||||||| |||||||||||| || |||||||||||  ||||| ||||| |||| | ||| |||||  |||||||||||||    
T  6697252 taacggagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatt 6697153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 27234685 - 27234634
Alignment:
Q  136 tccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||||||||||    
T  27234685 tccgtctcatattaactgagtcatttgttcatttcacacatattaagaaaaa 27234634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 3667832 - 3667912
Alignment:
Q  167 tttcacacatattaagaaaaagtgaataagtg--aaagagagagaaatagttttgactgtcttgtcaagtattggtgcatt 245  Q
    ||||||||||||||||||| |||| |||||||  ||| ||||| ||||| |||||| |||||| ||||||||| |||||||    
T  3667832 tttcacacatattaagaaatagtgtataagtgaaaaaaagagaaaaataattttgagtgtcttatcaagtattagtgcatt 3667912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 1643231 - 1643314
Alignment:
Q  125 taactactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagaga 209  Q
    |||||||||||||||||||   ||||| ||| | |||  |||||||||||||||||||||||| || |||| |||||||||||||    
T  1643231 taactactccctccgtcccgaattaaccgagccatttcctcatttcacacatattaagaaaaa-tgtataaatgaaagagagaga 1643314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 178
Target Start/End: Original strand, 6591463 - 6591511
Alignment:
Q  130 actccctccgtcccattttaactgagtcttttgttcatttcacacatat 178  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  6591463 actcccttcgtcccattttaagtgagtctattgttcatttcacacatat 6591511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 245
Target Start/End: Complemental strand, 43008094 - 43007966
Alignment:
Q  123 gttaactactccctccgtcccattttaactgagtcttttgt--tcatttcacacatattaag-aaaaagtgaataagtgaaagaga--gagaaatagttt 217  Q
    ||||| ||||| |||| ||||||| ||| ||||| |||| |  ||||||||||||| ||||| |||||  | ||||||||||||||  || |||||||||    
T  43008094 gttaagtactcactccttcccattataagtgagttttttttgctcatttcacacatgttaagaaaaaaacgtataagtgaaagagagggaaaaatagttt 43007995  T
Q  218 tgactgtc-ttgtcaagtattggtgcatt 245  Q
    ||| |||| |||||||||||| |||||||    
T  43007994 tgagtgtctttgtcaagtatttgtgcatt 43007966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 11616751 - 11616634
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaata--gttttgactg-tc 225  Q
    |||||||||||||||   ||||||||| | |||| |||||||||||||||||| |||| ||  |||| |||| |||||||||| |  ||||| | || ||    
T  11616751 tactccctccgtcccggattaactgagccatttgctcatttcacacatattaaaaaaatgt--ataaatgaaggagagagaaaaatggttttaagtgctc 11616654  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    |||| |||||||||||||||    
T  11616653 ttgttaagtattggtgcatt 11616634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 21446613 - 21446545
Alignment:
Q  143 cattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||| |||| || | |||||| | || |||||||||||| || ||||||||||||||||||||    
T  21446613 cattttaacttagtccttggctcattttatacttattaagaaaaattgtataagtgaaagagagagaaa 21446545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 27337788 - 27337908
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagaga----gaaatagttttgactgt 224  Q
    ||||| |||| ||||| ||||||||||||  |||  ||||||||| |  ||||||||| ||| |||| | |||||||||    ||||||||||||| |||    
T  27337788 tactctctccatcccagtttaactgagtcagttgaccatttcacataggttaagaaaa-gtgtataaataaaagagagaaagagaaatagttttgagtgt 27337886  T
Q  225 ctt-gtcaagtattggtgcatt 245  Q
    ||| ||||||||||||||||||    
T  27337887 ctttgtcaagtattggtgcatt 27337908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 40023647 - 40023754
Alignment:
Q  132 tccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtg--aaagagagagaaatagttttgactgtcttgt 229  Q
    ||||||| ||||| ||||| ||||  ||||||| ||||||||  |||||||||||| |  |||| ||  ||||||||| |||| ||||||| ||||||||    
T  40023647 tccctccatcccactttaagtgagctttttgttaatttcacatgtattaagaaaaaatatataattgaaaaagagagaaaaattgttttgagtgtcttgt 40023746  T
Q  230 caagtatt 237  Q
    ||| ||||    
T  40023747 caaatatt 40023754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 45218075 - 45218193
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtc- 225  Q
    |||||||| | ||||| |||||||||| |  || | ||||||||||| |||||| ||||||| ||||  |||||||||||  |||||||||||| || |     
T  45218075 tactcccttcctcccagtttaactgagccaattttccatttcacacaaattaag-aaaagtgtataaaggaaagagagagaaaaatagttttgagtgcct 45218173  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    || |||||||||||||||||    
T  45218174 ttttcaagtattggtgcatt 45218193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 5724658 - 5724742
Alignment:
Q  162 gttcatttcacacatattaagaaaaagtgaataagtgaa--agagagagaaatagttttgactgtcttgtcaagtattggtgcatt 245  Q
    ||||||||||||| |||||||||||| || |||| ||||  ||||||| |||||||||| | || ||||| ||||||| |||||||    
T  5724658 gttcatttcacacgtattaagaaaaa-tgtataaatgaaggagagagaaaaatagttttaagtgccttgttaagtattagtgcatt 5724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 45890775 - 45890833
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    ||||||||||||||    ||||||||||  |||||||||||||||| ||||||||||||    
T  45890775 tactccctccgtcctgaattaactgagttatttgttcatttcacacgtattaagaaaaa 45890833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 10355648 - 10355701
Alignment:
Q  136 tccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagt 189  Q
    ||||||||||||||||| ||  ||||| ||||||||||| | ||||||||||||    
T  10355648 tccgtcccattttaacttagcattttgctcatttcacacttgttaagaaaaagt 10355701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 17494508 - 17494463
Alignment:
Q  158 ttttgttcatttcacacatattaagaaaaagtgaataagtgaaaga 203  Q
    |||| ||||||||||||||||||||||||| || |||||| |||||    
T  17494508 ttttattcatttcacacatattaagaaaaaatgtataagtaaaaga 17494463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 17558706 - 17558751
Alignment:
Q  158 ttttgttcatttcacacatattaagaaaaagtgaataagtgaaaga 203  Q
    |||| ||||||||||||||||||||||||| || |||||| |||||    
T  17558706 ttttattcatttcacacatattaagaaaaaatgtataagtaaaaga 17558751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 31549556 - 31549597
Alignment:
Q  146 tttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    ||||||||||||||||| |||||| |||| ||||||||||||    
T  31549556 tttaactgagtcttttgctcattttacacttattaagaaaaa 31549597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 9603018 - 9602974
Alignment:
Q  163 ttcatttcacacatattaagaaaaagtgaataagtgaaagagaga 207  Q
    |||||||||||| |||||| |||||||| ||||||| ||||||||    
T  9603018 ttcatttcacacttattaaaaaaaagtgcataagtggaagagaga 9602974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 9830589 - 9830545
Alignment:
Q  163 ttcatttcacacatattaagaaaaagtgaataagtgaaagagaga 207  Q
    |||||||||||| |||||| |||||||| ||||||| ||||||||    
T  9830589 ttcatttcacacttattaaaaaaaagtgcataagtggaagagaga 9830545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 211
Target Start/End: Original strand, 37490553 - 37490616
Alignment:
Q  147 ttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||| |||||| ||| |||||||||||||| |||||||||| || |||| |||| ||||||||||    
T  37490553 ttaagtgagtcatttattcatttcacacatgttaagaaaaa-tgtataaatgaaggagagagaaa 37490616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 2195655 - 2195540
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtct 226  Q
    ||||||||||||||| ||||| ||||| |||||  || |||||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||    
T  2195655 tactccctccgtcccgttttatctgag-ctttt--tcttttcacacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtgtct 2195559  T
Q  227 tgtcaagtattggtgcatt 245  Q
    ||| |||||||||||||||    
T  2195558 tgttaagtattggtgcatt 2195540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 36011909 - 36012028
Alignment:
Q  129 tactccctccgtcccattttaactga-gtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagag--agagaaatagttttgactgtc 225  Q
    |||| ||||||||||||||||| | | ||||||||||||||||||| || ||||||||| ||| |||||||||||||  |||||||| ||||||| ||||    
T  36011909 tacttcctccgtcccattttaagtcaagtcttttgttcatttcacatatgttaagaaaatgtgtataagtgaaagagaaagagaaatggttttgagtgtc 36012008  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    ||||||||||||| ||||||    
T  36012009 ttgtcaagtattgatgcatt 36012028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 14690151 - 14690032
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgt-c 225  Q
    ||||||||||||||||||||||||||| | ||   ||||||||||| ||||||||||||||| |||||||||||||||||  |||| ||||||| ||| |    
T  14690151 tactccctccgtcccattttaactgagcccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgagtgtcc 14690052  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    || |||| ||||||||||||    
T  14690051 ttatcaactattggtgcatt 14690032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 2797230 - 2797148
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||| ||| ||| ||||  ||||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  2797230 tactccctccgtccaattataaatgagctttttgttcatttcacaactattaagaaaaagtgaataagtgaaagaaagagaaa 2797148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 29451540 - 29451429
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtga---ataagtgaaagagagagaaatagttttgactgtc 225  Q
    |||| ||||| |||||||||||| ||  ||||||||||||||||||||||||||||||| |||   |||| ||||||||||| ||||||||||||   |     
T  29451540 tacttcctccatcccattttaaccgaaccttttgttcatttcacacatattaagaaaaaatgatgtataaatgaaagagagaaaaatagttttgaacatt 29451441  T
Q  226 ttgtcaagtatt 237  Q
    ||||||||||||    
T  29451440 ttgtcaagtatt 29451429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 14748620 - 14748700
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagaga 209  Q
    ||||||||||||||||||||||||||| | ||   |||||| |||| ||||||||||||||| ||||||||||||||||||    
T  14748620 tactccctccgtcccattttaactgagcccttgactcattttacacttattaagaaaaagtgtataagtgaaagagagaga 14748700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 2875005 - 2875087
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||||||| ||| | ||  ||||||||||||||||  ||||||||||| |||||||||||||||| |||||||    
T  2875005 tactccctccgtcccattataaataagctttttgttcatttcacaactattaagaaaaggtgaataagtgaaagaaagagaaa 2875087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 8840512 - 8840442
Alignment:
Q  134 cctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagaga 205  Q
    ||||||||||||| ||| |||| ||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  8840512 cctccgtcccattataagtgagccttttgt-catttcacacatattaagaaaaattgtataagtgaaagaga 8840442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 10728833 - 10728957
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgtt---catttcacacata-ttaagaaaaagtgaataagtgaaagagag----agaaatagttttga 220  Q
    ||||| ||||||||| ||||| ||||| ||||| ||   | ||||||||||| ||||||||||||| |||||||||||||||    | ||||||||||||    
T  10728833 tactctctccgtcccgttttatctgagccttttttttttcttttcacacataattaagaaaaagtgtataagtgaaagagagaaaaaaaaatagttttga 10728932  T
Q  221 ctgtcttgtcaagtattggtgcatt 245  Q
     |||||||| ||||||| |||||||    
T  10728933 gtgtcttgttaagtatttgtgcatt 10728957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 8566040 - 8566112
Alignment:
Q  139 gtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||||||| ||   ||||||||||| ||||||||||| ||| ||||||||||||| ||||||    
T  8566040 gtcccattttaactgagtcattgactcatttcacacttattaagaaaacgtgtataagtgaaagagggagaaa 8566112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 15020957 - 15020875
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaat 212  Q
    |||||||||||||||||||||| ||||  | |||||||||||||| |||||||| |||| || |||||| ||||||||| ||||    
T  15020957 tactccctccgtcccattttaagtgagcatattgttcatttcacatatattaag-aaaattgtataagttaaagagagaaaaat 15020875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 32231302 - 32231381
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag 208  Q
    |||||||||||||||||||||| |||| | ||   ||||||||||  |||||||||||| || |||||||||||||||||    
T  32231302 tactccctccgtcccattttaattgagcccttgtctcatttcacatttattaagaaaaaatgtataagtgaaagagagag 32231381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 45420890 - 45420937
Alignment:
Q  164 tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  45420890 tcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaa 45420937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 8418221 - 8418305
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgt-tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaat 212  Q
    ||||| ||||||||||||  || ||||| |||| | |||||| |||||||||||||||||||| |||| ||||||||||| ||||    
T  8418221 tactctctccgtcccattacaagtgagttttttttctcatttaacacatattaagaaaaagtgcataaatgaaagagagaaaaat 8418305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 28791498 - 28791380
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtc- 225  Q
    |||||||||||||||| |||||||||| |  || | ||||||||||| |||||| ||||||| ||||   ||||||||||  |||||||||||| || |     
T  28791498 tactccctccgtcccagtttaactgagccagttttccatttcacacagattaag-aaaagtgtataaagtaaagagagagaaaaatagttttgagtgcct 28791400  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    || |||||||||||||||||    
T  28791399 ttttcaagtattggtgcatt 28791380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 33743933 - 33743885
Alignment:
Q  163 ttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||| ||||||||||||||| |||| |||||||||||||||    
T  33743933 ttcatttcacacttattaagaaaaagtgtataaatgaaagagagagaaa 33743885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 43844673 - 43844721
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacata 177  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  43844673 tactccctccgtcccattttaattgagttttttgatcatttcacacata 43844721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 26677265 - 26677183
Alignment:
Q  129 tactccctccgtcccattttaactgagtctttt-gttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||| |||||||||   ||| ||||| |||| ||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  26677265 tactccttccgtcccaaaataaatgagttttttcgtttatttcacacatattaagaaaaa-tgtataagtgaaagagagagaaa 26677183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 7042944 - 7042886
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    ||||||||||||||||  |||| |||||| ||| |||||||||||||||| ||||||||    
T  7042944 tactccctccgtcccaaattaaatgagtcatttattcatttcacacatatcaagaaaaa 7042886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 42412330 - 42412418
Alignment:
Q  159 tttgttcatttcacacatattaagaaaaagtgaataagtgaa--agagagagaaatagttttgactg-tcttgtcaagtattggtgcatt 245  Q
    |||| |||||||||||||||||||||||| || |||||||||  ||||||| |||||||||| | || ||||||||  ||||||||||||    
T  42412330 tttgctcatttcacacatattaagaaaaa-tgtataagtgaatgagagagaaaaatagttttaagtgctcttgtcatatattggtgcatt 42412418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 5392240 - 5392121
Alignment:
Q  128 ctactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaata--gttttgactg-t 224  Q
    ||||||||||||||||   ||||||||| | |||| ||||||||||| |||||||| ||| || |||| |||| |||||||||| |  ||||| | || |    
T  5392240 ctactccctccgtcccggattaactgagccatttgctcatttcacacctattaagacaaa-tgtataaatgaaggagagagaaaaatggttttaagtgct 5392142  T
Q  225 cttgtcaagtattggtgcatt 245  Q
     ||||||||||||||||||||    
T  5392141 tttgtcaagtattggtgcatt 5392121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 37219685 - 37219761
Alignment:
Q  136 tccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaata 213  Q
    |||||||||  ||| ||||||| ||| ||||||||||||||||||||| ||| || |||| |||| ||||||||||||    
T  37219685 tccgtcccaaattagctgagtcattttttcatttcacacatattaagacaaa-tgtataaatgaaggagagagaaata 37219761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 886399 - 886443
Alignment:
Q  164 tcatttcacacatattaagaaaaagtgaataagtgaaagagagag 208  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||    
T  886399 tcatttcacacttattaagaaaaagtgtacaagtgaaagagagag 886443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 240
Target Start/End: Original strand, 42558500 - 42558611
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactg-tctt 227  Q
    ||||||||||||||||  ||||||| ||| |||| |||  ||||||||||||||| ||| || |||| |||| |||||| |||| ||||| | || ||||    
T  42558500 tactccctccgtcccagattaactgggtcatttgctcaaatcacacatattaagacaaa-tgtataaatgaaggagagataaatggttttaattgttctt 42558598  T
Q  228 gtcaagtattggt 240  Q
    || ||||||||||    
T  42558599 gttaagtattggt 42558611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 11637302 - 11637263
Alignment:
Q  158 ttttgttcatttcacacatattaagaaaaagtgaataagt 197  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  11637302 ttttgttcatgtcacacatattaagaaaaagtgtataagt 11637263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 244
Target Start/End: Original strand, 35150867 - 35150950
Alignment:
Q  161 tgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtcttgtcaagtattggtgcat 244  Q
    |||||||||||||||||||||||||||||  |||| | |||||| |||||| |   |||||||| ||||||  |||||| ||||    
T  35150867 tgttcatttcacacatattaagaaaaagttgataaataaaagagtgagaaaaatagttgactgttttgtcacttattggcgcat 35150950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 36610956 - 36610870
Alignment:
Q  158 ttttgttcatttcacacatattaagaaaaagtgaataagtgaaa--gagagagaaatagttttgactg-tcttgtcaagtattggtg 241  Q
    ||||||| |||||||||||| |||||||||  | ||||||||||  |||| ||||||||||||||  |  |||||||||||||||||    
T  36610956 ttttgtttatttcacacataataagaaaaaacgtataagtgaaagtgagatagaaatagttttgaaggaccttgtcaagtattggtg 36610870  T

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Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 1494172 - 1494246
Alignment:
Q  137 ccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||||| |||| |  | ||||||||||| ||||||| |||| || ||| ||||||||| ||||||    
T  1494172 ccgtcccattttaacttagtcatcggctcatttcacacttattaaggaaaaatgtatatgtgaaagagtgagaaa 1494246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 27973603 - 27973661
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    ||||| |||||||||| ||||| ||||  ||||| ||||||||||| ||||||||||||    
T  27973603 tactctctccgtcccaatttaagtgagcattttgctcatttcacacttattaagaaaaa 27973661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 28030872 - 28030930
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    ||||| |||||||||| ||||| ||||  ||||| ||||||||||| ||||||||||||    
T  28030872 tactctctccgtcccaatttaagtgagcattttgctcatttcacacttattaagaaaaa 28030930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 36649659 - 36649716
Alignment:
Q  154 agtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaat 212  Q
    |||| ||||||||||| |||| |||||||||||| || | |||||||||||||||||||    
T  36649659 agtcatttgttcattttacacttattaagaaaaa-tgtaaaagtgaaagagagagaaat 36649716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 245
Target Start/End: Original strand, 38201320 - 38201426
Alignment:
Q  142 ccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaa----agagagagaaatagttttgactgtcttgtcaagtatt 237  Q
    |||||||||| ||||||| |||||||||||| | || ||||||||| || | |||||||    ||||||| ||||| |||||| |||||| |||| ||||    
T  38201320 ccattttaaccgagtcttctgttcatttcactcgtactaagaaaaa-tgtaaaagtgaaagatagagagaaaaataattttgaatgtcttatcaaatatt 38201418  T
Q  238 ggtgcatt 245  Q
     |||||||    
T  38201419 tgtgcatt 38201426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 31410558 - 31410606
Alignment:
Q  162 gttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||||||||||||||| | ||||| |||| ||||||||||    
T  31410558 gttcatttcacacatattaagaaaaa-ttaataaatgaaggagagagaaa 31410606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 211
Target Start/End: Original strand, 4480405 - 4480468
Alignment:
Q  147 ttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||| ||||| |||| |||||| ||| ||||||||||||| || |||| |||||||||||||||    
T  4480405 ttaaccgagtcatttgctcatttaacatatattaagaaaaa-tgtataaatgaaagagagagaaa 4480468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 28802939 - 28802876
Alignment:
Q  147 ttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||| ||||||||  |||||| |||||||| ||| || |||| |||||||||||||||    
T  28802939 ttaactgagtcatttgttcaaatcacacgtattaagacaaa-tgtataaatgaaagagagagaaa 28802876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 37703147 - 37703096
Alignment:
Q  159 tttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||| |||||||||||||||||||||||| || ||||| |||| |||||||||    
T  37703147 tttgatcatttcacacatattaagaaaaa-tgtataagcgaaaaagagagaaa 37703096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 16126402 - 16126283
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagag---agaaatagttttgactgtc 225  Q
    ||||||||||||| |||||||||||| | ||||||||||||||||| ||||||||||||||| | ||| |||||||||   | ||| |||||||| ||||    
T  16126402 tactccctccgtctcattttaactgactattttgttcatttcacacgtattaagaaaaagtgtaaaagcgaaagagagaaaaaaaacagttttgagtgtc 16126303  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    |||| |||||||||||||||    
T  16126302 ttgtaaagtattggtgcatt 16126283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 128 - 245
Target Start/End: Original strand, 15371779 - 15371898
Alignment:
Q  128 ctactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaa--gagagagaaatagttttgactgtc 225  Q
    ||||||||| |||||||||||||||||| | || ||||||||||||  ||||||||||||||| ||||||||||  |||||| |||| ||||||| ||||    
T  15371779 ctactcccttcgtcccattttaactgagcccttggttcatttcacaattattaagaaaaagtgtataagtgaaagcgagagaaaaatggttttgagtgtc 15371878  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    || |||| |||| |||||||    
T  15371879 ttatcaactattagtgcatt 15371898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 241
Target Start/End: Complemental strand, 15325338 - 15325223
Alignment:
Q  128 ctactccctccgtcccattttaactgagtcttttgt-tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa--tagttttgactgt 224  Q
    |||||||||||||||||||||||||||| || |||  ||||||||||  ||||||||||||||| ||||||||||||||||||||  | ||||||| ||     
T  15325338 ctactccctccgtcccattttaactgag-ctcttgactcatttcacaattattaagaaaaagtgtataagtgaaagagagagaaaattggttttgaatgc 15325240  T
Q  225 cttgtcaagtattggtg 241  Q
    ||| |||| ||||||||    
T  15325239 cttatcaactattggtg 15325223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 34803620 - 34803721
Alignment:
Q  128 ctactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtc 225  Q
    ||||||||||||||||||||||| |||| | || | ||||||||||| ||||||||||||||| ||||  |||||||||||  |||| ||||||| ||||    
T  34803620 ctactccctccgtcccattttaattgagcccttagctcatttcacacttattaagaaaaagtgtataaaggaaagagagaggaaaatggttttgagtgtc 34803719  T
Q  226 tt 227  Q
    ||    
T  34803720 tt 34803721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 15355759 - 15355647
Alignment:
Q  135 ctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa--tagttttgactgtcttgtcaa 232  Q
    |||||| ||||||||||||||   || |||||||| |||  ||||||||||||||| |||||||||| |||||||||  | ||||||| |||||| ||||    
T  15355759 ctccgttccattttaactgagctcttggttcattttacaattattaagaaaaagtgtataagtgaaaaagagagaaaattggttttgagtgtcttatcaa 15355660  T
Q  233 gtattggtgcatt 245  Q
     ||||||||||||    
T  15355659 ctattggtgcatt 15355647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 31075841 - 31075959
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtct 226  Q
    |||||| ||||| ||||||||| |||   ||||||||||||||| || ||||||||||| || | |||||||||||||||  |||| || |||| |||||    
T  31075841 tactccttccgtgccattttaagtgatcattttgttcatttcacccacattaagaaaaaatgtacaagtgaaagagagagaaaaatggtattgagtgtct 31075940  T
Q  227 tgtcaagtattggtgcatt 245  Q
    | |||| ||||||||||||    
T  31075941 tttcaactattggtgcatt 31075959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 245
Target Start/End: Complemental strand, 20384006 - 20383917
Alignment:
Q  158 ttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaata--gttttgactgtcttgtcaagtattggtgcatt 245  Q
    |||||||| ||| |||||||||||||||| ||   ||||||||||||||| ||| |  ||||||| ||||||||||||||||||||||||    
T  20384006 ttttgttcctttaacacatattaagaaaaggtatgtaagtgaaagagagaaaaaaatggttttgagtgtcttgtcaagtattggtgcatt 20383917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 29444230 - 29444178
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaa 181  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  29444230 tactccctccgttccatattaactgagtcttttgttcatttcacacattttaa 29444178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 33921385 - 33921444
Alignment:
Q  128 ctactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||||||||||||||||||||||||||| | |||| ||||||| ||| ||||||||||||    
T  33921385 ctactccctccgtcccattttaactgagccatttgctcatttcgcacttattaagaaaaa 33921444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 4238587 - 4238493
Alignment:
Q  151 ctgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactg-tcttgtcaagtattggtgcatt 245  Q
    ||||||| ||| |||||||||||||||| |||| ||| || |||| ||||||||||| | |||||||| | || |||||| |||||||||||||||    
T  4238587 ctgagtcattttttcatttcacacatatcaagataaa-tgtataaatgaaagagagaaatatagttttaagtgctcttgttaagtattggtgcatt 4238493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 15321141 - 15321224
Alignment:
Q  128 ctactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||  |||||||||||||||  | || | | ||||||||  ||||||||||||||| |||| |||||||||||||||    
T  15321141 ctactccctctatcccattttaactgatcccttggcttatttcacaattattaagaaaaagtgtataactgaaagagagagaaa 15321224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 15351299 - 15351382
Alignment:
Q  128 ctactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||| |||||||||||| ||| || ||   ||||||||||  |||||||||||| || ||||||||| ||||||||||    
T  15351299 ctactccctctgtcccattttaattgaatccttgactcatttcacaattattaagaaaaaatgtataagtgaatgagagagaaa 15351382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 34703792 - 34703735
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||||||||||||||| ||||| ||||  ||||||||||||||||| ||||||||||||    
T  34703792 tactccctccgtcccaatttaagtgagcattttgttcatttcacac-tattaagaaaaa 34703735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 8045052 - 8045005
Alignment:
Q  148 taactgagtcttttgttcatttcacacatattaagaaaaagtgaataa 195  Q
    ||||| |||||||||||| ||||| |||||||||||||||||| ||||    
T  8045052 taacttagtcttttgttcgtttcaaacatattaagaaaaagtgtataa 8045005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 134 - 241
Target Start/End: Complemental strand, 5426044 - 5425933
Alignment:
Q  134 cctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagaga----aatagttttgactgtcttgt 229  Q
    |||| |||| || ||||||||  |||||||||||||||||| ||||||||||||||| ||||||||||||||||||    ||||||||||| ||| ||||    
T  5426044 cctctgtcctatcttaactgatccttttgttcatttcacacgtattaagaaaaagtgtataagtgaaagagagagagaataatagttttgagtgtattgt 5425945  T
Q  230 caagtattggtg 241  Q
    ||||||||||||    
T  5425944 caagtattggtg 5425933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 6972461 - 6972539
Alignment:
Q  133 ccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||||||||||||||||   ||||||||||| |||||||||||| || ||||||||||||||||||||    
T  6972461 ccctccgtcccattttaactgagtctttgactcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaa 6972539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 12949881 - 12949995
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagag--agaaatagttttgactgtct 226  Q
    |||||||||| | ||||| |||  ||| ||||||||||||||||| |||||| |||||| || |||||||||||||||  | ||||| |||||| |||||    
T  12949881 tactccctccattccattataatggagccttttgttcatttcacatatattacgaaaaaatgtataagtgaaagagagaaaaaaataattttgagtgtct 12949980  T
Q  227 tgtcaagtattggtg 241  Q
    |||||||||||||||    
T  12949981 tgtcaagtattggtg 12949995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 314619 - 314539
Alignment:
Q  128 ctactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag 208  Q
    ||||||||||||||||||||||||||||   ||   ||||||||||| ||||||||||||||| |||||||||||||||||    
T  314619 ctactccctccgtcccattttaactgagcgattgactcatttcacacttattaagaaaaagtgtataagtgaaagagagag 314539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 32556330 - 32556244
Alignment:
Q  159 tttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgt-cttgtcaagtattggtgcatt 245  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| |||| ||||| | | | |||||||||||||||||||||    
T  32556330 tttgttcatttcacacatattaag-aaaagtgtataagtgaaagagagaaaaatggttttaagtatccttgtcaagtattggtgcatt 32556244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 25604538 - 25604433
Alignment:
Q  132 tccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtcttgt 229  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||         |||| |||||||||||||||||  |||||||||||| ||||||||    
T  25604538 tccctccgtcgcattttaactgagccttttgttgatttcacacata---------agtgtataagtgaaagagagagaaaaatagttttgagtgtcttgt 25604448  T
Q  230 caagtattggtgcatt 245  Q
     |||||||||||||||    
T  25604447 -aagtattggtgcatt 25604433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 31592745 - 31592622
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgtt----catttcacacatattaagaaaaa-gtgaataagtgaaagagagagaaa--tagttttgac 221  Q
    |||| ||||||||||||||||   ||||||||| ||    | ||||||||||||||| ||||| ||| ||||||||||||||||||||  |||||| ||     
T  31592745 tacttcctccgtcccattttattcgagtctttttttatttcttttcacacatattaataaaaaagtgtataagtgaaagagagagaaaaatagtttcgag 31592646  T
Q  222 tgtcttgtcaagtattggtgcatt 245  Q
    ||||||||||||||||| ||||||    
T  31592645 tgtcttgtcaagtattgctgcatt 31592622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 13026761 - 13026652
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaaga-aaaagtgaataagtgaaag--agagagaaatagttttgactgtc 225  Q
    ||||||||| |||| ||||||||||||  ||||||||||||||||  |||||||| |||| || |||||||||||  | ||| ||||| |||||| ||||    
T  13026761 tactccctctgtcctattttaactgaggtttttgttcatttcacatttattaagaaaaaattgtataagtgaaagaaaaagaaaaataattttgagtgtc 13026662  T
Q  226 ttgtcaagta 235  Q
    ||||||||||    
T  13026661 ttgtcaagta 13026652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 13222259 - 13222177
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||||||||||| ||| | ||   | ||||||||| |||||||||||| || ||||||||||||||||||||    
T  13222259 tactccctccgtcccattttaaccgagccattgacttatttcacacttattaagaaaaaatgtataagtgaaagagagagaaa 13222177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 33045912 - 33045854
Alignment:
Q  148 taactgagtcttttgttcatttcacacatattaaga-aaaagtgaataagtgaaagaga 205  Q
    ||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||    
T  33045912 taactgagtctttcgtttatttcacacatattaagaaaaaagtgaataagtgaaagaga 33045854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 36748342 - 36748257
Alignment:
Q  125 taactactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||||||||| ||||||||||||  || | |||||||||||||||||| ||||||| ||||  |||| |||||||||    
T  36748342 taactactccctccgtcccagtttaactgagtcagttttccatttcacacatattaag-aaaagtgtataaaagaaatagagagaaa 36748257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 37528988 - 37529046
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||||||||||||||| |||||||||||| |||||||||||||||| |||||| |||||    
T  37528988 tactccctccgtcccaatttaactgagtcatttgttcatttcacacttattaaaaaaaa 37529046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 4282934 - 4283054
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaag-aaaaagtgaataagtgaaagagagag--aaatagttttgactg-t 224  Q
    |||| |||||||| |||||||||||||||||||| |||||| ||   ||||||| |||||||| |||||| ||||||||||  |||| ||||||| ||      
T  4282934 tacttcctccgtctcattttaactgagtcttttgctcattttacgtttattaagaaaaaagtgtataagtaaaagagagagaaaaatggttttgaatgcc 4283033  T
Q  225 cttgtcaagtattggtgcatt 245  Q
    ||| |||||||||||||||||    
T  4283034 cttatcaagtattggtgcatt 4283054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 9725068 - 9724989
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagaga 209  Q
    |||||||||||||| | ||||| |||||| |||  ||||||||||||||||||| ||||||| |||| |||||||||||||    
T  9725068 tactccctccgtcctaatttaattgagtcattttctcatttcacacatattaag-aaaagtgtataaatgaaagagagaga 9724989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 5007194 - 5007265
Alignment:
Q  166 atttcacacatattaagaaaaagtgaataagtgaaagagagag-aaatagttttgactgtcttgtcaagtat 236  Q
    ||||||||||||||||||||| ||| |||||| |||||||||| |||| ||||||| || ||||||||||||    
T  5007194 atttcacacatattaagaaaatgtgtataagtaaaagagagagaaaattgttttgagtgccttgtcaagtat 5007265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 45464132 - 45464209
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagaga 207  Q
    ||||| ||||||||||  |||| |||||| |||| |||||||||||||||||||||||| || ||||||||| ||||||    
T  45464132 tactctctccgtcccaaattaagtgagtcatttgctcatttcacacatattaagaaaaa-tgtataagtgaatgagaga 45464209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 928455 - 928531
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagaga 205  Q
    |||||| | |||||||||||||||||| | || | ||||||||||| ||||||||||||  | ||||||||||||||    
T  928455 tactccatacgtcccattttaactgagcccttggctcatttcacacttattaagaaaaaacgtataagtgaaagaga 928531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 6075638 - 6075551
Alignment:
Q  158 ttttgttcatttcacacatattaagaaaaagtgaataagtgaaagag--agagaaatagttttgactgtcttgtcaagtattggtgca 243  Q
    |||| ||| ||||||||||||||| ||||| ||  ||||||||||||  ||| |||||||||||| |||||||| ||||||| |||||    
T  6075638 tttttttcttttcacacatattaaaaaaaaatgtctaagtgaaagagaaagaaaaatagttttgagtgtcttgttaagtattagtgca 6075551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 6213777 - 6213848
Alignment:
Q  139 gtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||| ||||| ||||||||||| ||||||||||| |||||||||||| ||||| |||||| || |||||||    
T  6213777 gtcccaatttaagtgagtcttttgctcatttcacacttattaagaaaaa-tgaattagtgaatgaaagagaaa 6213848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 24356301 - 24356183
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa--tagttttgactgtc- 225  Q
    |||||||||||||||| |||||||||| |  || | ||||||||||| |||||| ||||||| ||||  ||||||||||||||  ||||||||| || |     
T  24356301 tactccctccgtcccagtttaactgagccaattttccatttcacacagattaag-aaaagtgtataaaggaaagagagagaaaactagttttgagtgcct 24356203  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    || |||||||||| ||||||    
T  24356202 ttttcaagtattgatgcatt 24356183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 43182462 - 43182344
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagag--agaaatagttttgactgtc- 225  Q
    |||| ||||||||||| ||||||||||||  || | ||||||||||| ||||||||||| || ||||  |||||||||  | ||||| |||||| ||||     
T  43182462 tacttcctccgtcccagtttaactgagtcagttttccatttcacacagattaagaaaaa-tgtataaaggaaagagagaaaaaaataattttgagtgtct 43182364  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    ||||||| ||||||||||||    
T  43182363 ttgtcaaatattggtgcatt 43182344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 34235232 - 34235114
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaa--gagagagaaatagttttgactgtct 226  Q
    |||||||||||||||||||||| ||||  ||||||| |||||||||||  | | ||||| || |||| | |||  | |||| ||||| |||| | |||||    
T  34235232 tactccctccgtcccattttaagtgagcattttgttaatttcacacattatgaaaaaaaatgtataaataaaattgggagaaaaataatttttagtgtct 34235133  T
Q  227 tgtcaagtattggtgcatt 245  Q
    ||||||||| |||||||||    
T  34235132 tgtcaagtactggtgcatt 34235114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 43427008 - 43427094
Alignment:
Q  134 cctccgtcccattttaactgagtcttttgt-tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttga 220  Q
    |||||||||||||||||||||| || |||  |||||||| || | ||||||||||||| |||| ||||||||||| |||||| |||||    
T  43427008 cctccgtcccattttaactgag-ctattgactcatttcatactttttaagaaaaagtgtataaatgaaagagagaaaaataggtttga 43427094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 27001750 - 27001693
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||||||||||||||| ||||| ||||  ||||||||||||||||| ||||||||||||    
T  27001750 tactccctccgtcccaatttaagtgagcattttgttcatttcacac-tattaagaaaaa 27001693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 28527154 - 28527096
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||||| ||||||||   ||||||||||| |||| ||||||||||||||||||||||||    
T  28527154 tactccatccgtcccgaattaactgagtcatttgctcatttcacacatattaagaaaaa 28527096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 40711102 - 40711044
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    ||||| ||||||| ||| |||| ||||||||||||| |||||||||||||||| |||||    
T  40711102 tactctctccgtcacatcttaagtgagtcttttgttaatttcacacatattaaaaaaaa 40711044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 44424244 - 44424298
Alignment:
Q  192 ataagtgaaagagagagaaa-tagttttgactgtcttgtcaagtattggtgcatt 245  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||||| ||||||    
T  44424244 ataagtgaaagagagagaaaatggttttgaatgtcttgtcaagtattgatgcatt 44424298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 14384057 - 14384110
Alignment:
Q  158 ttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||| ||||||||||||||| |  |||| |||||||||||||||    
T  14384057 ttttgttcatttcatacatattaagaaaaaatatataaatgaaagagagagaaa 14384110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 883100 - 883151
Alignment:
Q  159 tttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||| |||||    
T  883100 tttgttcatttcacacattttaag-aaaagtgtataagtgaaagagaaagaaa 883151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 19264688 - 19264597
Alignment:
Q  148 taactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtga--aagagagagaaatagttttgactgtcttgtcaagtatt 237  Q
    ||||||||| |||| |||||||||||   ||||||||||| || ||||||||  |||| ||| |||||||||| | ||||||||||| ||||    
T  19264688 taactgagttttttattcatttcacattcattaagaaaaaatgtataagtgatgaagaaagaaaaatagttttaagtgtcttgtcaaatatt 19264597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 33880299 - 33880220
Alignment:
Q  132 tccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaat 212  Q
    ||||||||||||| ||||| |||| | ||| ||||||| | ||| ||||||||||| || |||| ||||||||||||||||    
T  33880299 tccctccgtcccactttaattgagccattttttcattttatacagattaagaaaaa-tgcataaatgaaagagagagaaat 33880220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 8385236 - 8385154
Alignment:
Q  158 ttttgttcatttcacacatattaagaaaaagtgaataagtgaaa--gagagagaaatagttttgactgtcttgtcaagtattg 238  Q
    ||||||||||||||| | |||||||||||| || |||| |||||   ||| | |||| ||||||| |||||||||||||||||    
T  8385236 ttttgttcatttcacgcgtattaagaaaaaatgtataaatgaaaagtagaaaaaaattgttttgagtgtcttgtcaagtattg 8385154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 187
Target Start/End: Complemental strand, 19031927 - 19031896
Alignment:
Q  156 tcttttgttcatttcacacatattaagaaaaa 187  Q
    ||||||||||||||||||||||||||||||||    
T  19031927 tcttttgttcatttcacacatattaagaaaaa 19031896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 2048482 - 2048401
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||| ||||||||  ||||||||||||  ||   ||||||||||| |||||| ||||| || ||||||||||||||||||||    
T  2048482 tactctctccgtcctcttttaactgagttattgactcatttcacacttattaaaaaaaa-tgtataagtgaaagagagagaaa 2048401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 7213665 - 7213584
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||| |||||| ||||| |||| | |||  |||||||||||| ||||||||||| || |||| ||||| |||||||||    
T  7213665 tactccctcggtcccagtttaattgagccattttctcatttcacacagattaagaaaaa-tgtataaatgaaatagagagaaa 7213584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 245
Target Start/End: Complemental strand, 14890470 - 14890389
Alignment:
Q  164 tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtc-ttgtcaagtattggtgcatt 245  Q
    |||||||||||||| ||||||||| || |||| ||||||||| | |||| ||||||| |||| || ||||||||| |||||||    
T  14890470 tcatttcacacatactaagaaaaa-tgtataaatgaaagagataaaaatggttttgagtgtctttatcaagtattagtgcatt 14890389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 33275611 - 33275686
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagag 206  Q
    |||||||||| ||||| | ||| || ||||||||||| |||||| ||||||||||| || ||  ||||||||||||||    
T  33275611 tactccctccctcccactataagtgggtcttttgttcgtttcacgcatattaagaacaaatg--taagtgaaagagag 33275686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 245
Target Start/End: Original strand, 8550594 - 8550677
Alignment:
Q  164 tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa--tagttttgactg-tcttgtcaagtattggtgcatt 245  Q
    |||||||||||| ||| ||||||| || ||||||||||||||||||||  | ||||| | || |||||||||||||| |||||||    
T  8550594 tcatttcacacacatttagaaaaa-tgtataagtgaaagagagagaaaagtggttttaagtgttcttgtcaagtatttgtgcatt 8550677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 10069520 - 10069579
Alignment:
Q  147 ttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagaga 207  Q
    |||| ||||||||||| |||||||||||  ||||||||||| |  ||||||||||||||||    
T  10069520 ttaagtgagtcttttgctcatttcacactcattaagaaaaa-tatataagtgaaagagaga 10069579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 38872854 - 38872914
Alignment:
Q  145 ttttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagaga 205  Q
    |||||| ||||| ||||| |||||||| || ||||||||||||||| | ||||| ||||||    
T  38872854 ttttaattgagttttttgctcatttcatacttattaagaaaaagtgtaaaagtggaagaga 38872914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 43077643 - 43077761
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaa--agagagagaaatagttttgactgt-c 225  Q
    ||||||||| ||||||  |||||||||||    ||||||||||||| |||||||| ||| || |||| ||||  ||||||| |||||||||| | ||| |    
T  43077643 tactccctctgtcccagattaactgagtcaaaagttcatttcacacgtattaagacaaa-tgtataaatgaatgagagagaaaaatagttttaaatgtac 43077741  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    |||| || ||||||||||||    
T  43077742 ttgttaactattggtgcatt 43077761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 29225942 - 29225825
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagaga---aatagttttgactgtc 225  Q
    ||||||||||||||||| |||||||||  ||||||| |||| ||||||  |||||||||||| | ||||||||||||||||   ||||| ||||| ||||    
T  29225942 tactccctccgtcccatgttaactgagcattttgttaattttacacat--taagaaaaagtgtacaagtgaaagagagagagaaaataggtttgagtgtc 29225845  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    ||||||||||||||||||||    
T  29225844 ttgtcaagtattggtgcatt 29225825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 25983551 - 25983664
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtcttg 228  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||  ||||  |||| ||||| | ||||||     
T  25983551 tactctctccgtctcattttaactgagtcttttgttcatt-cacacatattaagaaaaagtgtataagtgaa--agagtaaaattgttttaagtgtctta 25983647  T
Q  229 tcaagtattggtgcatt 245  Q
    | |||||||||||||||    
T  25983648 ttaagtattggtgcatt 25983664  T

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Target: chr1; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 24131318 - 24131410
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgt-tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttga 220  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||||| ||||||||||||| | |||||||||||||||| |||| |||||||    
T  24131318 tactccctccgtcccattttaactgagtcatttgactcatttcacacttattaagaaaaagcgtataagtgaaagagagaaaaatggttttga 24131410  T

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Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 39420754 - 39420659
Alignment:
Q  153 gagtcttttgttcatttcacacatattaagaaaaa-gtgaataagtgaaagagagagaaa--tagttttgactgtcttgtcaagtattggtgcatt 245  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||  || |||||| ||||||||||||||||||||||||    
T  39420754 gagtcttttgttcatttcacgcatattaagaaaaaagtgtataaatgaaagagagagaaaaataattttgagtgtcttgtcaagtattggtgcatt 39420659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 29756059 - 29756141
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||||||||||| ||| | || | ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  29756059 tactccctccgtcccattttaacggagcccttggctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaa 29756141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 167 - 245
Target Start/End: Complemental strand, 2571514 - 2571435
Alignment:
Q  167 tttcacacatattaagaaaaagtgaataagtgaaagagagag-aaatagttttgactgtcttgtcaagtattggtgcatt 245  Q
    ||||||||||||||||||||| || |||| |||||||||||| |||||||||||| |||||||| |||||||||||||||    
T  2571514 tttcacacatattaagaaaaaatgtataaatgaaagagagagaaaatagttttgagtgtcttgttaagtattggtgcatt 2571435  T

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Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 29225322 - 29225407
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagt---gaataagtgaaagagagagaaa 211  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||   | ||||||||||||| ||||||    
T  29225322 tactccctccgtcccattataattgagtcttttgctcatttcacacatattaagaaaaagtgtagtataagtgaaagagtgagaaa 29225407  T

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Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 3160604 - 3160686
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||||||||||||||| | ||   ||||||||||| ||||||||||||||| |||||||||||||| |||||    
T  3160604 tactccctccgtcccattttaactgagcccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagaaagaaa 3160686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 26583919 - 26583837
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||||||||||||||  | ||   ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  26583919 tactccctccgtcccattttaactgaacccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaa 26583837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 26924035 - 26924119
Alignment:
Q  127 actactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||||| |||||||||||   || | ||||||||||| ||||||||||||||| | ||||||||||||||||||    
T  26924035 actactccctccgtcccgttttaactgagctcttggctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaa 26924119  T

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Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 37541038 - 37541149
Alignment:
Q  137 ccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtc-ttgtcaag 233  Q
    |||| ||||||||| |||||| ||  |||||||||||| ||||||||||||||| |||||||||||||||||  |||| ||||||| |||| || ||||     
T  37541038 ccgttccattttaattgagtcattgattcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgaatgtctttatcaac 37541137  T
Q  234 tattggtgcatt 245  Q
    ||||||||||||    
T  37541138 tattggtgcatt 37541149  T

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Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 10587499 - 10587581
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||||||| |||||||||||| |||||||    
T  10587499 tactccctccgtcccattttaagtgagttattgactcatttcacacttattaagaaaaagtgcataagtgaaagaaagagaaa 10587581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 26760467 - 26760385
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||| ||||||||||||||||| ||| ||||   ||||||||||| |||||||||||| || ||||||||||||||||||||    
T  26760467 tactctctccgtcccattttaaccgagcctttgactcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaa 26760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 34332276 - 34332219
Alignment:
Q  153 gagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  34332276 gagtcttttgttcatttcacacatattaagaaaaa-tgtataagtgaaagagagagaaa 34332219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 28424239 - 28424324
Alignment:
Q  127 actactccctccgtcccattttaactgagtcttttg-ttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||||||||||||| ||||| ||||  || ||||||||||||||||||||||||| |||| | ||| |||||||||    
T  28424239 actactccctccgtcccattttaattgagtttttttattaatttcacacatattaagaaaaagtgtataaataaaatagagagaaa 28424324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 7224568 - 7224473
Alignment:
Q  152 tgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaag--agagagaaatagttttgactgtcttgtcaagtattggtgcatt 245  Q
    |||||||||||||||||||||||||||||| ||||| || |||||||||||  || || |||| ||||||| | ||||| ||||||||| ||||||    
T  7224568 tgagtcttttgttcatttcacacatattaaaaaaaaatgtataagtgaaagaaagcgaaaaatggttttgagtttcttgacaagtattgatgcatt 7224473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 40988540 - 40988461
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagaga 209  Q
    |||||||||||||| ||| ||| |||| ||||| |||||||||||||||||||||||||  | ||||||||||||||||||    
T  40988540 tactccctccgtccaattataattgag-ctttttttcatttcacacatattaagaaaaatagtataagtgaaagagagaga 40988461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 50926938 - 50926819
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaata--gttttgactgtct 226  Q
    ||||||||||||| |||||||||||||  ||||  |||||||||| ||||||||||||| || |||||  ||||||||||||| |  ||||||| ||  |    
T  50926938 tactccctccgtctcattttaactgagcttttttctcatttcacatatattaagaaaaattgtataagaaaaagagagagaaaaatggttttgaatgcat 50926839  T
Q  227 t-gtcaagtattggtgcatt 245  Q
    | ||||||||||||||||||    
T  50926838 ttgtcaagtattggtgcatt 50926819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 40754336 - 40754422
Alignment:
Q  134 cctccgtcccattttaactgagtcttttgt-tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttga 220  Q
    ||||||||||| |||||||||| || |||  |||||||| || ||||||||||||||| ||||||||||||||||||||| |||||||    
T  40754336 cctccgtcccaatttaactgag-ctcttgactcatttcatacttattaagaaaaagtgtataagtgaaagagagagaaatggttttga 40754422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 35622671 - 35622737
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataa 195  Q
    |||||||||||| ||||||||||| |||||||||||||||| ||| |||| ||||||||||| ||||    
T  35622671 tactccctccgttccattttaactaagtcttttgttcattttacatatatcaagaaaaagtgtataa 35622737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 46363329 - 46363407
Alignment:
Q  131 ctccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagaga 209  Q
    |||||||||||| ||||||| |||| ||||   ||||||||||| ||||||||||||||| |||||||| |||||||||    
T  46363329 ctccctccgtccaattttaattgagcctttcactcatttcacacttattaagaaaaagtgtataagtgagagagagaga 46363407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 27832034 - 27831918
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactg-tctt 227  Q
    |||||| |||||||||  |||| |||| || ||| | |||||||| |||||||||||| ||| || ||||||||||||| |||||||||| | ||  |||    
T  27832034 tactccttccgtcccaaattaagtgagcctattggttatttcacaaatattaagaaaa-gtgcatgagtgaaagagagaaaaatagttttaagtgccctt 27831936  T
Q  228 gtcaagtattggtgcatt 245  Q
    ||||||||||||||||||    
T  27831935 gtcaagtattggtgcatt 27831918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 34814108 - 34813989
Alignment:
Q  128 ctactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaa--agagagagaaatagttttgactg-t 224  Q
    ||||||||||||||||| ||||| ||| | ||||| ||||||||||| |||||||||||| || || ||||||  ||||||| |||||||||| | || |    
T  34814108 ctactccctccgtcccaatttaagtgaattttttgctcatttcacacttattaagaaaaa-tgtattagtgaaggagagagaaaaatagttttaagtgtt 34814010  T
Q  225 cttgtcaagtattggtgcatt 245  Q
    ||||| ||||||| |||||||    
T  34814009 cttgttaagtattagtgcatt 34813989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 37496017 - 37495901
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtc-tt 227  Q
    |||||||||||||||| ||||| |||||  ||| ||||||||  ||| |||||| ||||||| |||| ||||| ||||||||||  |||||| |||| ||    
T  37496017 tactccctccgtcccagtttaattgagttattttttcatttcttacaaattaag-aaaagtgtataaatgaaaaagagagaaatgattttgaatgtcttt 37495919  T
Q  228 gtcaagtattggtgcatt 245  Q
     |||||||||||||||||    
T  37495918 atcaagtattggtgcatt 37495901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 36326123 - 36326241
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagaga--aatagttttgactgtc- 225  Q
    |||||||||| ||||| |||||||||| |  |||  ||||||||||| |||||| ||||||| |||| |||||||||||||  ||| ||||||| ||||     
T  36326123 tactccctccatcccagtttaactgagccagttgaacatttcacacagattaag-aaaagtgtataaatgaaagagagagaacaatggttttgagtgtct 36326221  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    ||||||| ||||||||||||    
T  36326222 ttgtcaaatattggtgcatt 36326241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 4466072 - 4466130
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||||||||||||||| ||||| |||| | |||||||||||||||| ||||||||||||    
T  4466072 tactccctccgtcccaatttaattgagccatttgttcatttcacacttattaagaaaaa 4466130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 21304725 - 21304842
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagaga-gaaatagttttgactgtc-t 226  Q
    |||||||| |||| || ||||||||||||  ||| |||||||||| | ||||||||||| || |||| |||||||||||  |||| ||||||| |||| |    
T  21304725 tactcccttcgtcgcagtttaactgagtcagttgatcatttcacataaattaagaaaaa-tgtataaatgaaagagagataaaattgttttgagtgtctt 21304823  T
Q  227 tgtcaagtattggtgcatt 245  Q
    |||||||||||| ||||||    
T  21304824 tgtcaagtattgatgcatt 21304842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 25418818 - 25418741
Alignment:
Q  142 ccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttga 220  Q
    |||| ||||| |||||||| | |||||||| ||||||||||||||| |  |||||||||||||||| ||||||||||||    
T  25418818 ccatattaacggagtcttt-gctcatttcatacatattaagaaaaattatataagtgaaagagagaaaaatagttttga 25418741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 37925173 - 37925239
Alignment:
Q  143 cattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagaga 209  Q
    ||||||||||||||  || | |||||| |||| ||||||||||||||| ||||||||||||||||||    
T  37925173 cattttaactgagttcttggctcatttaacacttattaagaaaaagtgtataagtgaaagagagaga 37925239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 50086222 - 50086108
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtc-tt 227  Q
    |||||| |||||| |||||||| ||||  |||| || |||||||||||  ||| |||||||| |||||||||||||||| ||||  |||||  |||| ||    
T  50086222 tactccatccgtcacattttaagtgagcattttctttatttcacacat--taa-aaaaagtgtataagtgaaagagagaaaaatgattttgtgtgtcttt 50086126  T
Q  228 gtcaagtattggtgcatt 245  Q
    ||||||||||||||||||    
T  50086125 gtcaagtattggtgcatt 50086108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 27932746 - 27932832
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacac----atattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||||||||||||| |||| || | ||||||||||     |||||||| ||||||  ||||||||||||||||||||    
T  27932746 tactccctccgtcccattttaactaagtcattggctcatttcacatttatatattaagtaaaagtatataagtgaaagagagagaaa 27932832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 42309596 - 42309511
Alignment:
Q  152 tgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtcttgtcaagtatt 237  Q
    |||||| ||||||||||||||| ||||||||||||| |  ||||||||||||| || |||| ||||| | ||| ||||||| ||||    
T  42309596 tgagtcgtttgttcatttcacatatattaagaaaaaatatataagtgaaagagtgaaaaatggttttaagtgtgttgtcaaatatt 42309511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 49662675 - 49662788
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaag-aaaaagtgaataagtgaaagagagagaaatagttttgactgtctt 227  Q
    |||||| || |||||||| |||  ||| |||||||| |||||||| |||||||| ||||| || |||||||||||||||| ||||  ||||||   ||||    
T  49662675 tactccatctgtcccattataaacgagccttttgtttatttcacaaatattaagaaaaaaatgtataagtgaaagagagaaaaatgattttgagcatctt 49662774  T
Q  228 gtcaagtattggtg 241  Q
     |||||||||||||    
T  49662775 ctcaagtattggtg 49662788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 2886403 - 2886323
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagaga 209  Q
    |||| ||| ||||||||||||| |||| | || | |||||||| || ||||||||||||||| |||||||| |||||||||    
T  2886403 tacttccttcgtcccattttaattgagcccttggctcatttcatacttattaagaaaaagtgtataagtgagagagagaga 2886323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 35946931 - 35947045
Alignment:
Q  124 ttaactactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaaga--gagagaaatagttttgac 221  Q
    ||||||||||||| ||| ||||| |||  ||||||||||||||||| | | ||||||| ||||| || ||||||||||||  |||| ||||| ||||||     
T  35946931 ttaactactcccttcgttccattataagcgagtcttttgttcattttataaatattaa-aaaaaatgtataagtgaaagaacgagaaaaataattttgag 35947029  T
Q  222 tgtcttgtcaagtatt 237  Q
    |||||| |||| ||||    
T  35947030 tgtcttatcaaatatt 35947045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 3718768 - 3718885
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaa-agagagagaaatagttttgactg-tct 226  Q
    ||||||||| |||||| ||||| |||   ||||| ||||||||||| |||||||||||| || || | |||| ||||||| |||||||||| | || |||    
T  3718768 tactccctctgtcccaatttaagtgaacattttgctcatttcacacttattaagaaaaa-tgtattaatgaagagagagaaaaatagttttaagtgctct 3718866  T
Q  227 tgtcaagtattggtgcatt 245  Q
    ||||||||||| |||||||    
T  3718867 tgtcaagtatttgtgcatt 3718885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 4933927 - 4933981
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaaga 183  Q
    |||||||||||||||||  ||  |||| |||||||||||||||||||||||||||    
T  4933927 tactccctccgtcccataatatgtgagccttttgttcatttcacacatattaaga 4933981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 5503602 - 5503520
Alignment:
Q  136 tccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagtttt 218  Q
    ||||||||||||||| |||||  ||   ||||||||||| ||||||||||||||| |||| |||| |||||| |||| |||||    
T  5503602 tccgtcccattttaattgagtgattgactcatttcacacttattaagaaaaagtgtataaatgaaggagagaaaaatggtttt 5503520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 30903183 - 30903229
Alignment:
Q  135 ctccgtcccattttaactgagtcttttgttcatttcacacatattaa 181  Q
    |||||||||||| ||| |||||||||||||||||||||| |||||||    
T  30903183 ctccgtcccattataaatgagtcttttgttcatttcacatatattaa 30903229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 5040494 - 5040574
Alignment:
Q  130 actccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||||  |||| |||||| |||| |||||||||||||||| ||| ||| || |||| |||| ||||||||||    
T  5040494 actccctccgtcccagattaagtgagtcctttgctcatttcacacatatttagacaaa-tgtataaatgaatgagagagaaa 5040574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 11425787 - 11425905
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaa--agagagagaaatagttttgactgtc- 225  Q
    |||||||||||||||| ||||| |||| | |||| |||||||||   |||||||||||| |  || ||||||  ||||||| |||||||||||| ||||     
T  11425787 tactccctccgtcccaatttaattgagccatttgctcatttcacgtttattaagaaaaa-tatattagtgaaggagagagaaaaatagttttgagtgtct 11425885  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    |||| |||||||||| ||||    
T  11425886 ttgttaagtattggtccatt 11425905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 14090792 - 14090740
Alignment:
Q  164 tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagtt 216  Q
    ||||||||||| |||||||| ||| || |||||||||||||||| ||||||||    
T  14090792 tcatttcacacttattaagacaaaatgtataagtgaaagagagaaaaatagtt 14090740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 28706541 - 28706659
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtga--aagagagagaaatagttttgactgtc- 225  Q
    ||||||||||||| || |||||||||| |  |||  ||||||||||||||||| ||||| || |||| |||  |||||||| |||| ||||||| || |     
T  28706541 tactccctccgtctcagtttaactgagccagttgaccatttcacacatattaa-aaaaaatgtataaatgaataagagagaaaaatggttttgagtgcct 28706639  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    ||||||||||||| ||||||    
T  28706640 ttgtcaagtattgatgcatt 28706659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 35622771 - 35622815
Alignment:
Q  201 agagagagaaatagttttgactgtcttgtcaagtattggtgcatt 245  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||    
T  35622771 agagagagaaatagttttgaatgtcttgtcgagtattgatgcatt 35622815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 36037051 - 36037108
Alignment:
Q  158 ttttgttcatttcacacatattaa----gaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||||||||||||    ||||||||| ||||||||||||| ||||||    
T  36037051 ttttgttcatttcacacatattaattatgaaaaagtgtataagtgaaagagtgagaaa 36037108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 16956699 - 16956652
Alignment:
Q  164 tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||| |||||||||||||||||||| |||||||||||  |||||||    
T  16956699 tcatttgacacatattaagaaaaagtgtataagtgaaaggaagagaaa 16956652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 245
Target Start/End: Original strand, 37280926 - 37281033
Alignment:
Q  136 tccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtc-ttgtcaagt 234  Q
    ||||||||| ||||||||||||  |||  ||||| ||||| ||||||||||| ||  ||| ||||  ||||||||||  |||||| |||| |||||||||    
T  37280926 tccgtcccagtttaactgagtcacttgaccatttgacacagattaagaaaaa-tgtgtaaatgaa--agagagaaatgattttgagtgtctttgtcaagt 37281022  T
Q  235 attggtgcatt 245  Q
    |||||||||||    
T  37281023 attggtgcatt 37281033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 4659621 - 4659563
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    ||||||||  |||||| ||||  |||||||||||| |||||||||| ||||||||||||    
T  4659621 tactccctttgtcccaatttagatgagtcttttgtccatttcacacttattaagaaaaa 4659563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 16040267 - 16040209
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||||||||||||| | ||||| |||||| |||| ||||||||||  ||||||||||||    
T  16040267 tactccctccgtccaaatttaattgagtcatttgctcatttcacatttattaagaaaaa 16040209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 17343024 - 17342966
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    |||||||  |||||| | ||||||||||| |||| |||||||||| |||||||||||||    
T  17343024 tactcccaacgtcccgtattaactgagtcatttgctcatttcacagatattaagaaaaa 17342966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 18186117 - 18186195
Alignment:
Q  131 ctccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagaga 209  Q
    |||||||||||| | | ||| |||| |||||  ||||||||||| |||||||||||| || || ||||||| |||||||    
T  18186117 ctccctccgtcctactataattgagccttttactcatttcacacgtattaagaaaaattgtatgagtgaaatagagaga 18186195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 21304576 - 21304495
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||| |||||   ||||||||||| ||||||||||||| ||||||||| ||||| || ||||  ||| ||||||||||    
T  21304576 tactccctctgtcccggattaactgagtcatttgttcatttcatacatattaa-aaaaattgtataaacgaaggagagagaaa 21304495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 46273345 - 46273232
Alignment:
Q  135 ctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtga--aagagagagaaatagttttgactg-tcttgtca 231  Q
    ||||||| |||| ||| ||||| ||||||| |||| ||| ||||||||||||| || |||| |||  |||| ||| ||||| |||||| || | ||||||    
T  46273345 ctccgtctcattataagtgagttttttgttaatttgacaaatattaagaaaaaatgtataaatgaataagatagaaaaataattttgaatgtttttgtca 46273246  T
Q  232 agtattggtgcatt 245  Q
    ||||||| ||||||    
T  46273245 agtattgatgcatt 46273232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 245
Target Start/End: Complemental strand, 49945104 - 49945004
Alignment:
Q  147 ttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtga--aagagagagaaatagttttgactg-tcttgtcaagtattggtgca 243  Q
    |||||| |||| |||| |||||||||||||||||||||||| || |||| |||  |||||||| |||| ||||| | || |||||| ||||||| |||||    
T  49945104 ttaactaagtcatttgctcatttcacacatattaagaaaaa-tgtataaatgaagaagagagaaaaatggttttaagtgctcttgttaagtatttgtgca 49945006  T
Q  244 tt 245  Q
    ||    
T  49945005 tt 49945004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 50773301 - 50773347
Alignment:
Q  164 tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaa 210  Q
    ||||||| ||| ||||||||||| ||| |||||||||||||||||||    
T  50773301 tcatttcgcacttattaagaaaacgtgtataagtgaaagagagagaa 50773347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 45049145 - 45049089
Alignment:
Q  163 ttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttga 220  Q
    ||||||||||||| |||||||||| ||| ||||  |||||||||| ||||||||||||    
T  45049145 ttcatttcacacaaattaagaaaa-gtgtataaaggaaagagagaaaaatagttttga 45049089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 7785207 - 7785247
Alignment:
Q  147 ttaactgagtcttttgttcatttcacacatattaagaaaaa 187  Q
    ||||||||||| |||| |||||||||||||| |||||||||    
T  7785207 ttaactgagtcatttgctcatttcacacatactaagaaaaa 7785247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 27209921 - 27210003
Alignment:
Q  165 catttcacacatattaagaaaaagtgaataagtgaaagagagag--aaatagttttgactgtc-ttgtcaagtattggtgcatt 245  Q
    ||||| |||||||||||||||| ||| |||| ||||||||||||  ||||  |||||| |||| ||| ||||||||||||||||    
T  27209921 cattttacacatattaagaaaa-gtgtataaatgaaagagagagaaaaatgattttgagtgtctttgacaagtattggtgcatt 27210003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 28908247 - 28908200
Alignment:
Q  161 tgttcatttcacacatattaagaaaaagtgaataagtgaaagagagaga 209  Q
    ||||||||||||||||||||||||||| || |||| |||| ||||||||    
T  28908247 tgttcatttcacacatattaagaaaaa-tgtataaatgaaggagagaga 28908200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 50267356 - 50267474
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaa--gagagagaaatagttttgactg-tc 225  Q
    |||||||||| ||||   |||||||||||    ||||||||||||| |||||||||||| || |||| |||||  |||||| |||||||||| | ||  |    
T  50267356 tactccctccatcccggattaactgagtcaaaagttcatttcacacgtattaagaaaaa-tgtataaatgaaagtgagagaaaaatagttttaagtgcac 50267454  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    |||| |||||||||||||||    
T  50267455 ttgttaagtattggtgcatt 50267474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 749 - 637
Alignment:
Q  135 ctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa--tagttttgactgtcttgtcaa 232  Q
    |||||| ||||||||||||||   || |||||||| |||  ||||||||||||||| |||||||||| |||||||||  | ||||||| |||||| ||||    
T  749 ctccgttccattttaactgagctcttggttcattttacaattattaagaaaaagtgtataagtgaaaaagagagaaaattggttttgagtgtcttatcaa 650  T
Q  233 gtattggtgcatt 245  Q
     ||||||||||||    
T  649 ctattggtgcatt 637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 4484 - 4413
Alignment:
Q  166 atttcacacatattaagaaaaagtgaataagtgaaagagagag-aaatagttttgactgtcttgtcaagtat 236  Q
    ||||||||||||||||||||| ||| |||||| |||||||||| |||| ||||||| || ||||||||||||    
T  4484 atttcacacatattaagaaaatgtgtataagtaaaagagagagaaaattgttttgagtgccttgtcaagtat 4413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 10706 - 10789
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaag-aaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||| |||||||||||||||||||||| || | ||||||||||  ||||||| ||||| ||  |||||||||||||||||||    
T  10706 tactccatccgtcccattttaactgagtcattggctcatttcacagttattaagaaaaaaatgtgtaagtgaaagagagagaaa 10789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 5234 - 5280
Alignment:
Q  164 tcatttcacacatattaagaaaaagtgaataagtgaaagagagagaa 210  Q
    ||||||| ||||||||||||||||||| |||| ||||||| ||||||    
T  5234 tcatttcgcacatattaagaaaaagtgcataaatgaaagatagagaa 5280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 352380 - 352496
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtc-tt 227  Q
    |||||||||||||||| ||||| ||||    ||  |||||||||||| |||||| ||||||| |||| | ||||||||| ||||| |||||| |||| ||    
T  352380 tactccctccgtcccagtttaattgagctagtttatcatttcacacagattaag-aaaagtgtataaataaaagagagaaaaataattttgagtgtcttt 352478  T
Q  228 gtcaagtattggtgcatt 245  Q
    || |||||||||||||||    
T  352479 gttaagtattggtgcatt 352496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 220212 - 220132
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagaga 209  Q
    ||||||||||||| ||||||||||||||  || | ||||||||||| || ||||||| |||| ||||| || |||||||||    
T  220212 tactccctccgtcgcattttaactgagttattggctcatttcacacttactaagaaagagtgtataagagagagagagaga 220132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 7838 - 7955
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaatagttttgactgtc-tt 227  Q
    |||||||||||||| ||||||| |||| | ||   ||||||||||  |||||||||||| || |||| ||||||||||| ||||  |||||| || | ||    
T  7838 tactccctccgtcctattttaattgagcccttgactcatttcacatttattaagaaaaaatgtataaatgaaagagagaaaaattattttgagtgccttt 7937  T
Q  228 gtcaagtattggtgcatt 245  Q
     |||| ||||||||||||    
T  7938 atcaactattggtgcatt 7955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 12352 - 12471
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagaga--aatagttttgactgtc- 225  Q
    |||||||||||| ||||| ||| ||||   || | ||||||||||| ||||||||||||  | |||| |||||||||| ||  ||| ||||||| ||||     
T  12352 tactccctccgttccattataagtgagcaattggctcatttcacacgtattaagaaaaaacgtataaatgaaagagagtgaataatggttttgagtgtct 12451  T
Q  226 ttgtcaagtattggtgcatt 245  Q
    |||||||||||| |||||||    
T  12452 ttgtcaagtattagtgcatt 12471  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 98985 - 98934
Alignment:
Q  159 tttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    ||||||||||||||||||||||||||||| || |||| |||| ||||||||||    
T  98985 tttgttcatttcacacatattaagaaaaa-tgtataaatgaatgagagagaaa 98934  T

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Target: scaffold0491 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 245
Target Start/End: Complemental strand, 11859 - 11766
Alignment:
Q  158 ttttgttcatttcacacatattaagaaaaagtga-ataagtgaaagagagagaaa------tagttttgactgtcttgtcaagtattggtgcatt 245  Q
    ||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||       |||||||| ||||||||  ||||||||||||||    
T  11859 ttttgttcatttcacgcatattaagaaaaa-tgatataactgaaagagagagaaaaatgatcagttttgagtgtcttgtagagtattggtgcatt 11766  T

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Target: scaffold0250 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 20645 - 20564
Alignment:
Q  129 tactccctccgtcccattttaactgagtcttttgttcatttcacacatattaagaaaaagtgaataagtgaaagagagagaaa 211  Q
    |||||||||||||||| ||||| ||||||  ||   ||||||||||| ||||||||||| || |||| || ||||||||||||    
T  20645 tactccctccgtcccaatttaattgagtcagtttaccatttcacacagattaagaaaaa-tgtataaatggaagagagagaaa 20564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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