View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10436_low_20 (Length: 244)
Name: NF10436_low_20
Description: NF10436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10436_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 4866763 - 4866991
Alignment:
| Q |
1 |
accaattttttacttgcatatatagtagtttata-ggattaatgcatggcatacgtttttgaaaacttcttgtctttcacagcatatcatacattatttt |
99 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4866763 |
accaattttttacttgcatatatagtagtttataaggattaatgcatgacatacgtttttgaaaacttcttgtctttcacagcatatcatacattatttt |
4866862 |
T |
|
| Q |
100 |
ggatgaaattcgattgacatggaacctacaattagcactatacaggtactaatgttaacattcaatgacttctcactatctgtttctttaatattcgttg |
199 |
Q |
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|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
4866863 |
ggatgaaattcgattgacaaggaacctacaattagcactatacaggtactaatgttaacattcaatgacttctcactatctgtttctttaatattcgttg |
4866962 |
T |
|
| Q |
200 |
cattcagggcatcaagaatgacttacttg |
228 |
Q |
| |
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||||||||||||||||||||||||||||| |
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|
| T |
4866963 |
cattcagggcatcaagaatgacttacttg |
4866991 |
T |
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