View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10437_1D_low_36 (Length: 226)

Name: NF10437_1D_low_36
Description: NF10437_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10437_1D_low_36
NF10437_1D_low_36
[»] chr4 (47 HSPs)
chr4 (63-206)||(53616720-53616863)
chr4 (68-206)||(2115657-2115795)
chr4 (77-206)||(50766579-50766707)
chr4 (77-206)||(43444284-43444412)
chr4 (68-206)||(34024507-34024643)
chr4 (68-206)||(9283793-9283930)
chr4 (68-198)||(9528955-9529085)
chr4 (77-206)||(56194490-56194620)
chr4 (77-206)||(20569143-20569274)
chr4 (78-211)||(1531798-1531932)
chr4 (117-206)||(29965565-29965654)
chr4 (68-184)||(47416766-47416881)
chr4 (68-206)||(51317867-51318004)
chr4 (68-206)||(25273757-25273902)
chr4 (68-206)||(38706780-38706917)
chr4 (77-201)||(9645624-9645747)
chr4 (77-206)||(6972700-6972829)
chr4 (107-206)||(49680458-49680560)
chr4 (68-206)||(10389824-10389960)
chr4 (77-206)||(31381742-31381869)
chr4 (85-206)||(4643755-4643877)
chr4 (77-206)||(37188664-37188790)
chr4 (108-206)||(8009431-8009526)
chr4 (77-206)||(43154084-43154218)
chr4 (77-206)||(10359617-10359744)
chr4 (68-172)||(35965077-35965182)
chr4 (70-201)||(35261071-35261205)
chr4 (86-206)||(868057-868181)
chr4 (69-166)||(12265338-12265436)
chr4 (112-206)||(14183729-14183822)
chr4 (108-206)||(21090075-21090171)
chr4 (70-161)||(27593952-27594042)
chr4 (126-190)||(2624438-2624501)
chr4 (108-198)||(32952826-32952913)
chr4 (68-166)||(18139021-18139120)
chr4 (130-206)||(44947353-44947431)
chr4 (68-166)||(49126234-49126333)
chr4 (77-150)||(5333584-5333657)
chr4 (108-166)||(35351269-35351327)
chr4 (77-150)||(5333656-5333728)
chr4 (110-159)||(49072873-49072922)
chr4 (77-156)||(1008186-1008265)
chr4 (118-163)||(46991242-46991287)
chr4 (113-159)||(21405440-21405486)
chr4 (123-156)||(52978744-52978777)
chr4 (134-197)||(1931795-1931856)
chr4 (70-156)||(36194577-36194665)
[»] chr6 (28 HSPs)
chr6 (68-206)||(25064105-25064243)
chr6 (68-206)||(7876114-7876252)
chr6 (68-206)||(7881172-7881310)
chr6 (83-206)||(8496850-8496974)
chr6 (68-215)||(12652810-12652960)
chr6 (77-206)||(17334654-17334785)
chr6 (77-206)||(8196477-8196605)
chr6 (83-199)||(33740655-33740770)
chr6 (68-206)||(17237355-17237491)
chr6 (68-206)||(23947388-23947524)
chr6 (77-206)||(4468438-4468565)
chr6 (77-189)||(33109713-33109823)
chr6 (71-206)||(8028188-8028322)
chr6 (83-206)||(16419043-16419165)
chr6 (77-198)||(10228558-10228678)
chr6 (68-215)||(4088329-4088476)
chr6 (77-206)||(12165720-12165847)
chr6 (114-206)||(35001506-35001597)
chr6 (68-156)||(4984697-4984784)
chr6 (96-172)||(5582755-5582831)
chr6 (68-189)||(34489118-34489240)
chr6 (70-162)||(28635233-28635327)
chr6 (77-175)||(9508816-9508913)
chr6 (108-166)||(25398476-25398534)
chr6 (108-150)||(8266545-8266587)
chr6 (116-162)||(13436705-13436751)
chr6 (127-189)||(25337499-25337560)
chr6 (110-159)||(33543734-33543784)
[»] chr2 (44 HSPs)
chr2 (68-206)||(30420551-30420689)
chr2 (77-206)||(27249221-27249349)
chr2 (77-206)||(45128087-45128215)
chr2 (68-205)||(36233879-36234018)
chr2 (77-206)||(21570477-21570606)
chr2 (68-206)||(40626098-40626234)
chr2 (86-206)||(6173524-6173643)
chr2 (68-206)||(32913116-32913252)
chr2 (63-215)||(34598856-34599007)
chr2 (68-206)||(2808542-2808677)
chr2 (86-206)||(32680651-32680771)
chr2 (77-206)||(4192722-4192849)
chr2 (68-206)||(8971697-8971835)
chr2 (68-201)||(3270304-3270435)
chr2 (77-206)||(7015781-7015908)
chr2 (77-198)||(4228015-4228136)
chr2 (63-189)||(39641945-39642071)
chr2 (83-206)||(40660002-40660121)
chr2 (77-206)||(20047152-20047279)
chr2 (108-200)||(26025486-26025576)
chr2 (68-206)||(9986412-9986554)
chr2 (77-189)||(27477038-27477148)
chr2 (85-176)||(42949605-42949696)
chr2 (68-206)||(3725055-3725191)
chr2 (95-206)||(41430929-41431039)
chr2 (69-201)||(27949299-27949432)
chr2 (108-206)||(8805781-8805877)
chr2 (117-206)||(22421659-22421746)
chr2 (68-206)||(41712835-41712972)
chr2 (68-189)||(459361-459481)
chr2 (107-188)||(31581808-31581887)
chr2 (68-206)||(25086908-25087048)
chr2 (136-201)||(3269186-3269251)
chr2 (136-201)||(3269745-3269810)
chr2 (108-200)||(32197871-32197961)
chr2 (77-166)||(17319208-17319295)
chr2 (77-162)||(9374668-9374747)
chr2 (108-160)||(18694961-18695014)
chr2 (68-156)||(3308791-3308881)
chr2 (83-160)||(30923589-30923664)
chr2 (77-142)||(24587597-24587662)
chr2 (83-156)||(10237370-10237445)
chr2 (83-156)||(14955390-14955465)
chr2 (116-156)||(23933778-23933818)
[»] chr3 (31 HSPs)
chr3 (68-206)||(44907468-44907606)
chr3 (77-206)||(32607345-32607473)
chr3 (77-206)||(36905998-36906126)
chr3 (77-206)||(14464384-14464514)
chr3 (68-206)||(25631596-25631734)
chr3 (83-205)||(12115976-12116100)
chr3 (69-206)||(29503331-29503466)
chr3 (83-206)||(35499268-35499394)
chr3 (68-206)||(4172434-4172571)
chr3 (77-198)||(50611495-50611615)
chr3 (77-171)||(3850559-3850653)
chr3 (68-206)||(4178432-4178569)
chr3 (77-206)||(39917467-39917594)
chr3 (86-198)||(38855114-38855226)
chr3 (63-206)||(2342355-2342496)
chr3 (83-200)||(25162319-25162434)
chr3 (83-206)||(17237685-17237809)
chr3 (83-206)||(38440648-38440769)
chr3 (83-206)||(46934525-46934646)
chr3 (77-206)||(49552294-49552421)
chr3 (68-206)||(51202324-51202456)
chr3 (69-166)||(22802890-22802988)
chr3 (68-163)||(37169098-37169194)
chr3 (83-162)||(21487994-21488073)
chr3 (77-166)||(46178453-46178543)
chr3 (134-206)||(30648789-30648860)
chr3 (86-166)||(42719406-42719486)
chr3 (118-166)||(30829892-30829940)
chr3 (117-161)||(31793996-31794040)
chr3 (83-150)||(36735277-36735344)
chr3 (110-166)||(6913255-6913311)
[»] chr1 (40 HSPs)
chr1 (68-206)||(5701131-5701270)
chr1 (68-206)||(30878949-30879087)
chr1 (77-206)||(20266185-20266313)
chr1 (68-206)||(35584688-35584828)
chr1 (85-206)||(51868715-51868835)
chr1 (69-201)||(25406359-25406490)
chr1 (68-206)||(7997661-7997800)
chr1 (77-204)||(19715966-19716094)
chr1 (68-198)||(40646562-40646692)
chr1 (77-206)||(28035022-28035150)
chr1 (77-206)||(50272210-50272338)
chr1 (83-206)||(14545409-14545530)
chr1 (68-211)||(50148246-50148390)
chr1 (77-206)||(51871747-51871874)
chr1 (77-172)||(25728062-25728157)
chr1 (77-206)||(30818416-30818543)
chr1 (77-206)||(40881082-40881211)
chr1 (77-206)||(9172371-9172501)
chr1 (77-206)||(9180353-9180483)
chr1 (68-206)||(5324628-5324764)
chr1 (68-206)||(33291488-33291626)
chr1 (77-206)||(19723216-19723344)
chr1 (133-206)||(31836745-31836818)
chr1 (107-206)||(9919302-9919400)
chr1 (83-206)||(11453824-11453946)
chr1 (77-206)||(27872622-27872749)
chr1 (77-206)||(38520604-38520731)
chr1 (77-206)||(7342605-7342733)
chr1 (68-201)||(18569385-18569517)
chr1 (77-206)||(50166169-50166297)
chr1 (115-206)||(34519054-34519143)
chr1 (85-206)||(3871299-3871419)
chr1 (77-206)||(45426136-45426260)
chr1 (77-203)||(44637305-44637429)
chr1 (77-162)||(45805922-45806007)
chr1 (77-166)||(7312207-7312296)
chr1 (96-163)||(39987292-39987360)
chr1 (107-189)||(30558743-30558822)
chr1 (113-173)||(18649984-18650044)
chr1 (83-166)||(41081812-41081896)
[»] chr8 (34 HSPs)
chr8 (68-206)||(14906993-14907131)
chr8 (77-206)||(2655755-2655884)
chr8 (68-206)||(9619427-9619565)
chr8 (68-206)||(4808841-4808978)
chr8 (68-206)||(43890194-43890332)
chr8 (68-206)||(9498669-9498808)
chr8 (68-215)||(11725559-11725704)
chr8 (65-206)||(11464046-11464185)
chr8 (68-199)||(42448104-42448235)
chr8 (68-206)||(44577913-44578050)
chr8 (63-206)||(11196764-11196903)
chr8 (77-206)||(33895967-33896096)
chr8 (77-206)||(9072603-9072732)
chr8 (70-198)||(17949126-17949253)
chr8 (68-206)||(34611681-34611818)
chr8 (68-206)||(19876089-19876225)
chr8 (68-206)||(44100004-44100139)
chr8 (108-206)||(35580375-35580471)
chr8 (69-166)||(28239711-28239809)
chr8 (77-206)||(37565949-37566078)
chr8 (83-166)||(15597275-15597359)
chr8 (85-172)||(32724592-32724678)
chr8 (117-206)||(43192416-43192503)
chr8 (68-166)||(33342314-33342413)
chr8 (82-189)||(16794184-16794289)
chr8 (77-206)||(29777115-29777233)
chr8 (77-156)||(27747231-27747310)
chr8 (129-166)||(33298794-33298831)
chr8 (111-198)||(17427294-17427382)
chr8 (111-198)||(17430944-17431032)
chr8 (91-183)||(26801494-26801586)
chr8 (83-189)||(15046785-15046891)
chr8 (65-165)||(39153255-39153355)
chr8 (107-159)||(14912989-14913041)
[»] chr7 (40 HSPs)
chr7 (68-206)||(46821884-46822022)
chr7 (77-206)||(46338932-46339061)
chr7 (77-206)||(2843299-2843425)
chr7 (68-206)||(23425442-23425578)
chr7 (68-215)||(35496236-35496382)
chr7 (68-212)||(26492235-26492378)
chr7 (68-199)||(42311150-42311280)
chr7 (86-206)||(48207790-48207908)
chr7 (83-215)||(26583599-26583730)
chr7 (77-206)||(22927940-22928068)
chr7 (68-206)||(21266262-21266397)
chr7 (68-206)||(35667302-35667438)
chr7 (87-206)||(42408251-42408369)
chr7 (77-199)||(433769-433890)
chr7 (85-206)||(1485327-1485446)
chr7 (68-200)||(1448906-1449036)
chr7 (77-189)||(20116462-20116572)
chr7 (70-198)||(42067139-42067265)
chr7 (68-206)||(45199102-45199238)
chr7 (68-183)||(32684555-32684671)
chr7 (77-206)||(23085399-23085528)
chr7 (67-166)||(6001890-6001990)
chr7 (107-206)||(14627949-14628047)
chr7 (72-166)||(31235900-31235995)
chr7 (137-215)||(17223060-17223136)
chr7 (145-206)||(34773657-34773718)
chr7 (107-166)||(3860861-3860920)
chr7 (139-206)||(6558817-6558884)
chr7 (108-166)||(36143776-36143834)
chr7 (108-187)||(1575165-1575243)
chr7 (105-156)||(20083238-20083289)
chr7 (84-200)||(35261183-35261300)
chr7 (116-156)||(5546277-5546317)
chr7 (129-172)||(7640885-7640928)
chr7 (24-55)||(25175499-25175530)
chr7 (90-159)||(32522042-32522116)
chr7 (68-156)||(1749300-1749388)
chr7 (134-197)||(17499738-17499799)
chr7 (134-197)||(17553415-17553476)
chr7 (116-156)||(24351000-24351040)
[»] chr5 (47 HSPs)
chr5 (68-206)||(30371597-30371735)
chr5 (77-206)||(27266929-27267058)
chr5 (68-206)||(18677535-18677673)
chr5 (77-206)||(7246840-7246968)
chr5 (68-177)||(10649326-10649434)
chr5 (86-206)||(2057908-2058027)
chr5 (83-206)||(26578137-26578261)
chr5 (77-206)||(7241664-7241792)
chr5 (77-206)||(21060352-21060479)
chr5 (77-206)||(7150405-7150533)
chr5 (77-206)||(781271-781398)
chr5 (78-206)||(16981173-16981299)
chr5 (68-206)||(35475407-35475543)
chr5 (68-211)||(28235458-28235599)
chr5 (83-206)||(43261889-43262009)
chr5 (83-206)||(34881598-34881727)
chr5 (68-206)||(7887008-7887144)
chr5 (63-206)||(19259881-19260022)
chr5 (85-206)||(19281015-19281134)
chr5 (86-206)||(36344561-36344678)
chr5 (117-206)||(30298130-30298217)
chr5 (83-171)||(20257798-20257886)
chr5 (126-206)||(27751857-27751935)
chr5 (68-206)||(42579750-42579897)
chr5 (70-206)||(3271472-3271612)
chr5 (65-184)||(15570779-15570897)
chr5 (68-206)||(41184510-41184651)
chr5 (110-206)||(43148645-43148740)
chr5 (108-201)||(27576425-27576516)
chr5 (83-150)||(11767695-11767762)
chr5 (108-201)||(42886392-42886482)
chr5 (70-156)||(14211076-14211162)
chr5 (95-163)||(10148698-10148766)
chr5 (68-156)||(2979469-2979559)
chr5 (108-199)||(3166272-3166363)
chr5 (124-175)||(31802574-31802625)
chr5 (126-162)||(1696979-1697015)
chr5 (67-154)||(8088371-8088459)
chr5 (83-171)||(28097041-28097128)
chr5 (108-163)||(1582233-1582288)
chr5 (108-163)||(1602527-1602582)
chr5 (111-166)||(7613165-7613220)
chr5 (69-156)||(8514796-8514883)
chr5 (98-184)||(42432803-42432887)
chr5 (108-166)||(6445849-6445907)
chr5 (90-163)||(17682831-17682903)
chr5 (97-187)||(42432169-42432255)
[»] scaffold0311 (1 HSPs)
scaffold0311 (68-206)||(8590-8726)
[»] scaffold0146 (1 HSPs)
scaffold0146 (83-206)||(16390-16514)
[»] scaffold0495 (1 HSPs)
scaffold0495 (77-198)||(5277-5397)
[»] scaffold0014 (1 HSPs)
scaffold0014 (112-198)||(201450-201534)
[»] scaffold0003 (1 HSPs)
scaffold0003 (83-206)||(361869-361986)
[»] scaffold0426 (1 HSPs)
scaffold0426 (83-155)||(6223-6295)
[»] scaffold0888 (1 HSPs)
scaffold0888 (83-156)||(1831-1906)
[»] scaffold0002 (1 HSPs)
scaffold0002 (116-156)||(453851-453891)


Alignment Details
Target: chr4 (Bit Score: 116; Significance: 4e-59; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 63 - 206
Target Start/End: Complemental strand, 53616863 - 53616720
Alignment:
Q  63 cgttaaggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatcta 162  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  53616863 cgttgaggggtgactttgggtcaattcttgacctgaaatcaccactcttcatcgttttctctttatttcaatctaaataagtgattttcacatagatcta 53616764  T
Q  163 ggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  53616763 ggttttttttctttgtaatttcatcatctaagtgtggtgatttg 53616720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 2115795 - 2115657
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||| ||||||||||||||    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||     
T  2115795 aggggtggttttgggtcaattattgacctgaaatcacttttcttcatctttttctctttatttcaatctaaataagtgattttcacatagatttaggttt 2115696  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  2115695 tttttctttgtaatttcatcatctaagtgtggtgatttg 2115657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 50766707 - 50766579
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||| |||||||||    
T  50766707 tttgggtcaattcttgatctgaaatcatccctcttcatctttttctctttatttcaatctaaataaatgattttcacatagatctaagtt-tttttcttt 50766609  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||||| ||||||||||||||||    
T  50766608 gtaatttcatcatctaagtgtggtgatttg 50766579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 43444284 - 43444412
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||| |||| ||||||||| |  |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||    
T  43444284 tttgggtcaatttttgatctgaaatcacccatcttcatctttttctctttatttcaatctaaataagtgattttcacatatatctaggtt-tttttcttt 43444382  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||||| ||||||||||||||||    
T  43444383 gtaatttcatcatctaagtgtggtgatttg 43444412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 34024643 - 34024507
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||      
T  34024643 aggggtggttttggatcaattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagttattttcacatagatctaggt-- 34024546  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||| | |||||||||| ||||||||||| ||||    
T  34024545 tttttctttttgatttcatcatctaagtgtggtggtttg 34024507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 9283793 - 9283930
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||| ||| ||||||||||| | ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||     
T  9283793 aggggtggttttgggtcaatacttaacctgaaatcacccctcttcatcgttttctctttatttcaatctaaataagtgatttttacatagatctaggtt- 9283891  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  9283892 tttttatttgtaatttcatcatctaagtgtggtgatttg 9283930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 9529085 - 9528955
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||| ||||||||||||||| || |||     
T  9529085 aggggtggttttgggtcaattcttgacctgaaatcacccctctttatctttttctctttatttcaatctaaataagtgattttcacatagatttatgttt 9528986  T
Q  168 tttttctttgtaatttcatcatgtaagtgtg 198  Q
    ||||||||||| |||||||||| ||||||||    
T  9528985 tttttctttgtgatttcatcatctaagtgtg 9528955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 56194490 - 56194620
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg-ttatttttctt 175  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||| || ||||||||    
T  56194490 tttgggtcaattcttgacctgaaatcaaacctcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggtttttttttctt 56194589  T
Q  176 tgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||| |||||||||| ||||||||||| ||||    
T  56194590 tgtgatttcatcatctaagtgtggtggtttg 56194620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 20569143 - 20569274
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg--ttatttttct 174  Q
    ||||| ||||||||| ||||||||||| | |||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||  || |||||||    
T  20569143 tttgggtcaattcttaacctgaaatcacccctcttcatttttttctctttatttcaatctaaataaatgattttcacatagatctaggttttttttttct 20569242  T
Q  175 ttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||||| ||||||||||||||||    
T  20569243 ttataatttcatcatctaagtgtggtgatttg 20569274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 78 - 211
Target Start/End: Original strand, 1531798 - 1531932
Alignment:
Q  78 ttggatcaattcttgacctgaaatcaacactcttcatctttt-tctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    |||| ||||||||||||||||||||| | ||||| ||||||| ||||| |||||||||||||||||| ||||||||||||||||||| || |||||||||    
T  1531798 ttgggtcaattcttgacctgaaatcacccctctttatcttttctctctctatttcaatctaaataagtgattttcacatagatctagattttttttcttt 1531897  T
Q  177 gtaatttcatcatgtaagtgtggtgatttgatgtc 211  Q
    || |||||||||| ||||||||||| |||| ||||    
T  1531898 gtgatttcatcatctaagtgtggtggtttgttgtc 1531932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 29965565 - 29965654
Alignment:
Q  117 ttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  29965565 ttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttg 29965654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 47416766 - 47416881
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||| ||||| |||||| ||||| |||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||     
T  47416766 aggggtgattttgggtcaattattgacttgaaatcacccctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaagtt- 47416864  T
Q  168 tttttctttgtaatttc 184  Q
    |||||||||||||||||    
T  47416865 tttttctttgtaatttc 47416881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 51317867 - 51318004
Alignment:
Q  68 aggggtgactttggatcaattctt-gacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtt 166  Q
    |||||||| ||||| ||||||||| ||||||||||||    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||     
T  51317867 aggggtgattttgggtcaattctttgacctgaaatcactcatcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggt- 51317965  T
Q  167 atttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
     ||||||||| | |||||||||| ||||||||||||||||    
T  51317966 -tttttctttttgatttcatcatctaagtgtggtgatttg 51318004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 25273757 - 25273902
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctt-----tttctctttatttcaatctaaataagggattttcacatagatcta 162  Q
    |||||||  ||||||||||||||||||||||||||| | |||||||||||     ||||||| |||||||||||||||||| ||||||||||||||||||    
T  25273757 aggggtggttttggatcaattcttgacctgaaatcacccctcttcatcttcatcttttctctctatttcaatctaaataagtgattttcacatagatcta 25273856  T
Q  163 gg--ttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||  || ||||||||||| |||||||||| ||||||||||| ||||    
T  25273857 ggttttttttttctttgtgatttcatcatctaagtgtggtggtttg 25273902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 38706917 - 38706780
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||||| || |||||| |  ||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||     
T  38706917 aggggtggttttgggtcaattcttgatctaaaatcacccttcttcatctttttctctctatttcaatctaaataagtgattttcacatagatttaggtt- 38706819  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||||||| ||||||||||| ||||    
T  38706818 tttttctttgtgatttcatcatctaagtgtggtggtttg 38706780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 201
Target Start/End: Complemental strand, 9645747 - 9645624
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||||||||||||| |||| | |||||||||||||| ||| |||||||||||||||||| || ||||||||||||||||||| |||||||||    
T  9645747 tttgggtcaattcttgacctgatatcacccctcttcatctttttgtctctatttcaatctaaataagtgactttcacatagatctaggtt-tttttcttt 9645649  T
Q  177 gtaatttcatcatgtaagtgtggtg 201  Q
    |  |||||||||| |||||||||||    
T  9645648 gcgatttcatcatctaagtgtggtg 9645624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 6972700 - 6972829
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||| ||||||||| | |||||||||||||| ||| |||||||||||||||||| || ||| ||||||||| | ||| |||||||||    
T  6972700 tttgggtcaattcttgatctgaaatcacctctcttcatctttttatctgtatttcaatctaaataagtgacttttacatagatccatgttttttttcttt 6972799  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  6972800 gtgatttcatcatctaagtgtggtggtttg 6972829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 49680458 - 49680560
Alignment:
Q  107 ctcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg---ttatttttctttgtaatttcatcatgtaagtgtggtgat 203  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||   || |||||||||||||||||||||| |||||||||||||    
T  49680458 ctcttcatctttttctctttatttcaatccaaataagtgattttcacatggatctaggtttttttttttctttgtaatttcatcatctaagtgtggtgat 49680557  T
Q  204 ttg 206  Q
    |||    
T  49680558 ttg 49680560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 10389960 - 10389824
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||||||||||||||||||    ||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||      
T  10389960 aggggtggttttgggtcaattcttgacctgaaatcactcatcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggt-- 10389863  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||| || | |||||||||| ||||||||||| ||||    
T  10389862 tttttccttttgatttcatcatctaagtgtggtggtttg 10389824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 31381869 - 31381742
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||||||||||||| | ||  |||||||||||||| | ||||||| |||||||| |||||||||||||||||| ||  |||||||||    
T  31381869 tttgggtcaattcttgacctgaaatcaccccttctcatctttttctctctttttcaatttaaataagtgattttcacatagatctaagt--tttttcttt 31381772  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  31381771 gtgatttcatcatctaagtgtggtggtttg 31381742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 4643755 - 4643877
Alignment:
Q  85 aattcttgacctgaaatcaacac--tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatt 182  Q
    |||| |||||||||||||| | |  ||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||| || ||||||||||| |||    
T  4643755 aatttttgacctgaaatcacccccctcttcatctttttctctctatttcaatctaaataagtgattt-cacatagatctagattttttttctttgtgatt 4643853  T
Q  183 tcatcatgtaagtgtggtgatttg 206  Q
    ||||||| ||||||||||| ||||    
T  4643854 tcatcatctaagtgtggtggtttg 4643877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 37188790 - 37188664
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||| ||||||||||||||    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||    |||||||||    
T  37188790 tttgggtcaattattgacctgaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctag---ttttttcttt 37188694  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  37188693 gtgatttcatcatttaagtgtggtggtttg 37188664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 8009526 - 8009431
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    ||||||||||| |||||||||| ||||||||||| ||||    
T  8009526 tcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctag---ttttttctttgtgatttcatcatctaagtgtggtggtttg 8009431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 43154218 - 43154084
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtt------attt 170  Q
    ||||| |||||||||||| |||||||| | ||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||       |||    
T  43154218 tttgggtcaattcttgacttgaaatcacccctcttcatctttt-ctctctatttcaatctaaataagtgattttcacatagatctaggtttttttgtttt 43154120  T
Q  171 ttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||| |||| ||||| ||||||||||| ||||    
T  43154119 ttctttgtgattttatcatttaagtgtggtggtttg 43154084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 10359744 - 10359617
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||| |||||||||||||| |   |||||||||||||||| |||||| ||||||||||| |||||| ||||| ||||||||  ||||||||     
T  10359744 tttgggtcaatttttgacctgaaatcacccaacttcatctttttctctctatttcgatctaaataagtgattttaacatatatctaggt--tttttcttc 10359647  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  10359646 gtgatttcatcatctaagtgtggtggtttg 10359617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 172
Target Start/End: Complemental strand, 35965182 - 35965077
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataaggga-ttttcacatagatctaggtt 166  Q
    |||||||  ||||| |||||| || ||||||||||| | |||||||||||||||||| ||||||||||| |||||| || ||||||||||||||||||||    
T  35965182 aggggtggttttgggtcaattttttacctgaaatcacctctcttcatctttttctctctatttcaatctgaataagtgatttttcacatagatctaggtt 35965083  T
Q  167 attttt 172  Q
     |||||    
T  35965082 tttttt 35965077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 70 - 201
Target Start/End: Original strand, 35261071 - 35261205
Alignment:
Q  70 gggtgactttggatcaattcttgacctgaaatcaaca----ctcttcatctttttc-tctttatttcaatctaaataagggattttcacatagatctagg 164  Q
    |||||| ||||| |||||| |||||||||||| | ||    ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||| ||||    
T  35261071 gggtgattttgggtcaatttttgacctgaaataatcatcccctcttcatctttttcctctttattgcaatctaaataagtgattttcacatagatttagg 35261170  T
Q  165 ttatttttctttgtaatttcatcatgtaagtgtggtg 201  Q
    |  |||||||| || |||| ||||| |||||||||||    
T  35261171 t--tttttcttcgtgatttgatcatctaagtgtggtg 35261205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 868057 - 868181
Alignment:
Q  86 attcttgacctgaaatcaacactcttcatctttttctctttattt-------caatctaaataagggattttcacatagatctaggttatttttctttgt 178  Q
    ||||||||| |||||||| | |||||||||||||||||| |||||       |||||||||||||  ||||||||||||||||||   ||||||||||||    
T  868057 attcttgacatgaaatcacccctcttcatctttttctctctatttcaaatttcaatctaaataagttattttcacatagatctag---atttttctttgt 868153  T
Q  179 aatttcatcatgtaagtgtggtgatttg 206  Q
     |||||||||| ||||||||||| ||||    
T  868154 gatttcatcatctaagtgtggtggtttg 868181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 12265338 - 12265436
Alignment:
Q  69 ggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataaggga-ttttcacatagatctaggtt 166  Q
    ||||||| ||| | |||||| |||||||||||||| | |||||||||||||| ||  |||||||||||||||||| || ||||||||||||||||||||    
T  12265338 ggggtgatttttggtcaatttttgacctgaaatcacccctcttcatctttttatccctatttcaatctaaataagtgatttttcacatagatctaggtt 12265436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 14183729 - 14183822
Alignment:
Q  112 catctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||||| |||||||||||||||||| ||||||||||  |||||| ||| ||||||||||| |||||| ||| ||||||||||| ||||    
T  14183729 catctttttctctctatttcaatctaaataagtgattttcacaaggatctaagtt-tttttctttgtgatttcaccatctaagtgtggtggtttg 14183822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 21090075 - 21090171
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||||||||||| |||||  |||||||| || |||||||||| ||| | ||||| ||||    
T  21090075 tcttcatctttttctctctatttcaatataaataagtgattttcacatagatttaggt--tttttcttcgtgatttcatcatctaaatatggtggtttg 21090171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 27594042 - 27593952
Alignment:
Q  70 gggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatct 161  Q
    |||||| ||| | |||||| ||||| |||||||| | |||||||||||||||||| |||||||||||||||||| || ||||||||||||||    
T  27594042 gggtgattttaggtcaatttttgacatgaaatcacc-ctcttcatctttttctctatatttcaatctaaataagcgagtttcacatagatct 27593952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 2624438 - 2624501
Alignment:
Q  126 tatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatg 190  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||| || ||||| |||||    
T  2624438 tatttcaatctaaataagtgattttcacatagatctaggtt-tttttcttcgtgatttcgtcatg 2624501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 32952913 - 32952826
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtg 198  Q
    ||||||||||||||||| ||||||||  |||||||| | |||||||||||||||||    ||||||||||| ||||| |||| ||||||||    
T  32952913 tcttcatctttttctctctatttcaaattaaataagtgtttttcacatagatctag---ttttttctttgtgatttcgtcatctaagtgtg 32952826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 18139120 - 18139021
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataaggga-ttttcacatagatctaggtt 166  Q
    |||||||| ||| | | |||| |||||||| |||||   ||||||||| |||||||| |||||||||||||||||| || |||||||||| |||||||||    
T  18139120 aggggtgattttaggtaaatttttgacctggaatcacacctcttcatcattttctctctatttcaatctaaataagtgatttttcacatacatctaggtt 18139021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 44947353 - 44947431
Alignment:
Q  130 tcaatctaaataagggattttcacatagatctagg--ttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||||||| ||||||| ||||||||||||  || ||||||||||| ||||||| || ||||||||||| ||||    
T  44947353 tcaatctaaataagtgattttcgcatagatctaggttttttttttctttgtgatttcattatctaagtgtggtggtttg 44947431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 49126333 - 49126234
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataaggga-ttttcacatagatctaggtt 166  Q
    |||||||| ||| | | |||| |||||||| |||||   ||||||||| |||||||| |||||||||||||||||| || |||||||||| |||||||||    
T  49126333 aggggtgattttaggtaaatttttgacctggaatcacacctcttcatcattttctctctatttcaatctaaataagtgatttttcacatacatctaggtt 49126234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 5333657 - 5333584
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacac-tcttcatctttttctctttatttcaatctaaataagggatttt 150  Q
    ||||| |||||| |||||||||||||| ||| ||||||||||||||||| ||||||||| |||||||| ||||||    
T  5333657 tttgggtcaatttttgacctgaaatca-cacatcttcatctttttctctctatttcaatataaataagtgatttt 5333584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 35351327 - 35351269
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtt 166  Q
    |||||||| ||||| |||||||||||| |||||||| ||| ||||||||||||||||||    
T  35351327 tcttcatccttttcgctttatttcaatttaaataagtgatattcacatagatctaggtt 35351269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 5333728 - 5333656
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggatttt 150  Q
    ||||| |||||| ||||| |||||||| | |||||||||||||||||| ||||||||| |||||||| ||||||    
T  5333728 tttgggtcaatttttgacatgaaatcacc-ctcttcatctttttctctctatttcaatataaataagtgatttt 5333656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 49072922 - 49072873
Alignment:
Q  110 ttcatctttttctctttatttcaatctaaataagggattttcacatagat 159  Q
    ||||| |||||||||||||||||||||| ||||| |||||||||||||||    
T  49072922 ttcatatttttctctttatttcaatctatataagtgattttcacatagat 49072873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 1008186 - 1008265
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacata 156  Q
    |||||||||||  ||||| ||||||||    ||| ||||||||||||| ||||| |||||||||||| ||||||||||||    
T  1008186 tttggatcaatatttgacttgaaatcactcatctgcatctttttctctctattttaatctaaataagtgattttcacata 1008265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 46991287 - 46991242
Alignment:
Q  118 tttctctttatttcaatctaaataagggattttcacatagatctag 163  Q
    ||||||| ||||||||||||||| || |||||||||||||||||||    
T  46991287 tttctctctatttcaatctaaatgagtgattttcacatagatctag 46991242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 21405440 - 21405486
Alignment:
Q  113 atctttttctctttatttcaatctaaataagggattttcacatagat 159  Q
    ||||||| |||| ||||||||||||| |||| |||||||||||||||    
T  21405440 atcttttcctctctatttcaatctaattaagtgattttcacatagat 21405486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 52978744 - 52978777
Alignment:
Q  123 ctttatttcaatctaaataagggattttcacata 156  Q
    ||||||||||||||||||||| ||||||||||||    
T  52978744 ctttatttcaatctaaataagtgattttcacata 52978777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 1931856 - 1931795
Alignment:
Q  134 tctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgt 197  Q
    ||||||||||  ||||||||| ||||||||||  |||||| |||| |||||||||| |||||||    
T  1931856 tctaaataagttattttcacaaagatctaggt--tttttcattgtgatttcatcatctaagtgt 1931795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 36194577 - 36194665
Alignment:
Q  70 gggtgactttggatcaattcttgacctgaaatcaacactcttcatcttttt-ctc-tttatttcaatctaaataagggattttcacata 156  Q
    |||||| ||| |||||||| ||||||| ||| || | |||| ||||||||| ||| ||| ||||||| |||||||| ||||||||||||    
T  36194577 gggtgattttagatcaatttttgacctaaaaacatccctctgcatcttttttctcctttctttcaatttaaataagtgattttcacata 36194665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 9e-54; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 25064105 - 25064243
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  25064105 aggggtggttttgggtcaattcttgacctgaaatcacctctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttt 25064204  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  25064205 tttttctttgtaatttcatcatctaagtgtggtgatttg 25064243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 7876252 - 7876114
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  |||||||||||| ||||||| |||||| |  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||     
T  7876252 aggggtggttttggatcaattattgacctaaaatcacccatcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagattt 7876153  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  7876152 tttttctttgcaatttcatcatctaagtgtggtgatttg 7876114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 7881310 - 7881172
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  |||||||||||| ||||| |||||||| |  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||     
T  7881310 aggggtggttttggatcaattattgacttgaaatcacctttcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagattt 7881211  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  7881210 tttttctttgcaatttcatcatctaagtgtggtgatttg 7881172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 206
Target Start/End: Original strand, 8496850 - 8496974
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg-ttatttttctttgtaat 181  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||| |    
T  8496850 tcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggtttttttttctttgtagt 8496949  T
Q  182 ttcatcatgtaagtgtggtgatttg 206  Q
    |||||||| |||||| |||||||||    
T  8496950 ttcatcatttaagtgcggtgatttg 8496974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 68 - 215
Target Start/End: Original strand, 12652810 - 12652960
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||     
T  12652810 aggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctagattt 12652909  T
Q  168 ttttt---ctttgtaatttcatcatgtaagtgtggtgatttgatgtccatc 215  Q
    |||||   |||||| |||||||||| ||||||||||| |||| ||| ||||    
T  12652910 tttttttcctttgtgatttcatcatctaagtgtggtggtttgttgttcatc 12652960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 17334654 - 17334785
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg--ttatttttct 174  Q
    |||||||| |||||||| ||||||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |  || |||||||    
T  17334654 tttggatcgattcttgatctgaaatcaccaatcttcatctttttctgtttatttcaatctaaataagtgattttcacatagatctaagttttttttttct 17334753  T
Q  175 ttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||||| || ||||||||||||||||    
T  17334754 ttgtaatttcataatctaagtgtggtgatttg 17334785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 8196605 - 8196477
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||||||| |||||||||| |||||| |  | ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  8196605 tttggatcagttcttgacctaaaatcacccgtattcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggtt-tttttcttt 8196507  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  8196506 gtgatttcatcatataagtgtggtggtttg 8196477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 33740770 - 33740655
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatt 182  Q
    |||||||||||||| |||||| | |||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||| ||||||||||| |||    
T  33740770 tcaattcttgacctaaaatcacccctcttcatctttttctctctatttcaatctaaataagtgattttcacatagatttaggtt-tttttctttgtgatt 33740672  T
Q  183 tcatcatgtaagtgtgg 199  Q
    ||||||| |||||||||    
T  33740671 tcatcatctaagtgtgg 33740655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 17237491 - 17237355
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||||||||| |||||||| | |||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||      
T  17237491 aggggtggttttgggtcaattcttgacatgaaatcacccctcttcatctttttctctatatttcaatctaaataagttattttcacatagatctaggt-- 17237394  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||| ||| ||||||||||| ||||    
T  17237393 tttttctttgtgatttcagcatctaagtgtggtggtttg 17237355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 23947524 - 23947388
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||||||||||||||| |  |||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||      
T  23947524 aggggtggttttgggtcaattcttgacctgaaatcacccatcttcatcgttttctctctatttcaatctaaataagtgattttcacatagatctaggt-- 23947427  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||| | |||||||||| ||||||||||| ||||    
T  23947426 tttttctttttgatttcatcatctaagtgtggtggtttg 23947388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 4468438 - 4468565
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||||||||| |||| ||| | ||||||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||  |||||||||    
T  4468438 tttgggtcaattcttgacatgaagtcacccctcttcatcttgttctctctatttcaatctaaataagtgattttcatatagatctaggt--tttttcttt 4468535  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  4468536 gtgatttcatcatataagtgtggtggtttg 4468565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 77 - 189
Target Start/End: Original strand, 33109713 - 33109823
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||| ||||||| |||||  |  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||    
T  33109713 tttgggtcaatttttgacctaaaatcgtccatcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggt--tttttcttt 33109810  T
Q  177 gtaatttcatcat 189  Q
    || ||||||||||    
T  33109811 gtgatttcatcat 33109823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 206
Target Start/End: Complemental strand, 8028322 - 8028188
Alignment:
Q  71 ggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttattt 170  Q
    ||||| ||||| |||||| |||| ||| ||||| | | |||||||||||||||| | |||||||||||||||| |||||||||||||||||| ||| |||    
T  8028322 ggtgattttgggtcaattattgatctggaatcaccccacttcatctttttctctctgtttcaatctaaataagtgattttcacatagatctaagtt-ttt 8028224  T
Q  171 ttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||| | |||||||||| ||||||||||| ||||    
T  8028223 ttctttatgatttcatcatctaagtgtggtggtttg 8028188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 83 - 206
Target Start/End: Original strand, 16419043 - 16419165
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatt 182  Q
    ||||||||| |||| |||||| |  ||||||||||||||||| |||||||||||||||||| || ||||||||||||||  ||| ||||||||||| |||    
T  16419043 tcaattcttaacctaaaatcacccatcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctttgtt-tttttctttgtgatt 16419141  T
Q  183 tcatcatgtaagtgtggtgatttg 206  Q
    ||||||| ||||||||||| ||||    
T  16419142 tcatcatctaagtgtggtggtttg 16419165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 10228558 - 10228678
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||||||||||||| | |||||||||||| ||||| || ||||||||||||||| || ||| ||||| ||||| ||| |||||||||    
T  10228558 tttgggtcaattcttgacctgaaatcacccctcttcatctttctctctctacttcaatctaaataagtgacttttacatatatctatgtt-tttttcttt 10228656  T
Q  177 gtaatttcatcatgtaagtgtg 198  Q
    || |||||||||| ||||||||    
T  10228657 gtgatttcatcatttaagtgtg 10228678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 215
Target Start/End: Original strand, 4088329 - 4088476
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttc-tctttatttcaatctaaataagggattttcacatagatctaggtt 166  Q
    |||||||  ||||| ||||||||||||||||||||| |  ||||||| |||||  ||| |||| ||||||||||||| |||||||||||||||||| |||    
T  4088329 aggggtggttttgggtcaattcttgacctgaaatcacccatcttcattttttttatctctattacaatctaaataagtgattttcacatagatcta-gtt 4088427  T
Q  167 atttttctttgtaatttcatcatgtaagtgtggtgatttgatgtccatc 215  Q
     ||||||||| | |||||||||| ||||||||||| |||| ||| ||||    
T  4088428 ttttttctttttgatttcatcatctaagtgtggtggtttgttgttcatc 4088476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 12165720 - 12165847
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||| ||||||||||||||   |||||||||||||| |   |||||||||||||||||| ||||||||||||||| |||||  |||||||||    
T  12165720 tttgggtcaattattgacctgaaatcactcctcttcatctttttatgcctatttcaatctaaataagtgattttcacatagatttaggt--tttttcttt 12165817  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||  ||| ||||| ||||||||||| ||||    
T  12165818 gtggttttatcatctaagtgtggtggtttg 12165847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 114 - 206
Target Start/End: Original strand, 35001506 - 35001597
Alignment:
Q  114 tctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| ||||| |||||||||||| || ||| ||||||||||| ||| ||||||||||| |||||||||| ||||||||||| ||||    
T  35001506 tctttttctctctattttaatctaaataagtgacttttacatagatctatgtt-tttttctttgtgatttcatcatctaagtgtggtggtttg 35001597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 4984784 - 4984697
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacata 156  Q
    |||||||  ||||| |||||||||||||||||||||    |||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  4984784 aggggtggttttgggtcaattcttgacctgaaatcactcatcttcatctttt-ctctctatttcaatctaaataagtgattttcacata 4984697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 5582831 - 5582755
Alignment:
Q  96 tgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttattttt 172  Q
    |||||||| |||||||||||||||||| | ||||| |||||||||||  |||||||| ||||||||| ||| |||||    
T  5582831 tgaaatcaccactcttcatctttttctttatattttaatctaaataaatgattttcaaatagatctaagtttttttt 5582755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 34489118 - 34489240
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttca--atctaaataaggga-ttttcacatagatctagg 164  Q
    |||||||  ||| |||||||| ||||| | |||||| | |||||||||||||||||| || ||||  || |||||||| || ||||||||||||||||||    
T  34489118 aggggtggtttttgatcaatttttgacttaaaatcacccctcttcatctttttctctctaattcaatatataaataagtgatttttcacatagatctagg 34489217  T
Q  165 ttatttttctttgtaatttcatcat 189  Q
    |  |||||||| || ||||||||||    
T  34489218 t--tttttcttcgtgatttcatcat 34489240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 28635327 - 28635233
Alignment:
Q  70 gggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggat--tttcacatagatcta 162  Q
    |||||| |||||  ||||| ||||||| |||||| | |||||||| ||||||| ||||||||||| |||||||| |||  ||| |||||||||||    
T  28635327 gggtgattttgggacaatttttgacctcaaatcatccctcttcatatttttctttttatttcaatttaaataagtgattcttttacatagatcta 28635233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 175
Target Start/End: Complemental strand, 9508913 - 9508816
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctt 175  Q
    |||||||||||| ||||||   ||||| || |||||  |||||||| |||| ||||||||||||||| |||||||||||| |||||  || ||||||||    
T  9508913 tttggatcaatt-ttgacccataatcaccattcttccactttttctttttaattcaatctaaataagtgattttcacatatatctatattttttttctt 9508816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 25398476 - 25398534
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtt 166  Q
    ||||||||||||| ||||| | |||||||||||||| |||||| || ||||||||||||    
T  25398476 tcttcatctttttatctttgtctcaatctaaataagtgattttaacgtagatctaggtt 25398534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 8266545 - 8266587
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggatttt 150  Q
    ||||||||||||||||| || ||||||||||||||| ||||||    
T  8266545 tcttcatctttttctctctacttcaatctaaataagtgatttt 8266587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 13436705 - 13436751
Alignment:
Q  116 tttttctctttatttcaatctaaataagggattttcacatagatcta 162  Q
    ||||||||| ||||||||| |||||||| |||||||||||| |||||    
T  13436705 tttttctctctatttcaatttaaataagtgattttcacataaatcta 13436751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 25337499 - 25337560
Alignment:
Q  127 atttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcat 189  Q
    ||||||||||||||||  |||||||||||| ||||||||| |||||||| || ||||| ||||    
T  25337499 atttcaatctaaataaatgattttcacataaatctaggtt-tttttcttcgtgatttcgtcat 25337560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 33543784 - 33543734
Alignment:
Q  110 ttcatctttttctctttatttcaatctaaataaggga-ttttcacatagat 159  Q
    ||||||||||||||| ||||||||||||||||||  | |||||||||||||    
T  33543784 ttcatctttttctctatatttcaatctaaataagtaatttttcacatagat 33543734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 9e-54; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 30420551 - 30420689
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  |||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  30420551 aggggtggttttggatcaatttttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttt 30420650  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  30420651 tttttctttgtaatttcatcatctaagtgtggtgatttg 30420689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 27249349 - 27249221
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  27249349 tttgggtcaatacttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggtt-tttttcttt 27249251  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||  || ||||||||||||||||    
T  27249250 gtaatttcaagatctaagtgtggtgatttg 27249221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 45128087 - 45128215
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||    
T  45128087 tttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtgactttcacatagatctaggtt-tttttcttt 45128185  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  45128186 gtgatttcatcatctaagtgtggtggtttg 45128215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 36233879 - 36234018
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctag--gt 165  Q
    |||||||  ||||| ||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||   |    
T  36233879 aggggtggttttgggtcaattcatgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagattt 36233978  T
Q  166 tatttttctttgtaatttcatcatgtaagtgtggtgattt 205  Q
    | |||||||||||||||||||||| |||||||||||||||    
T  36233979 tttttttctttgtaatttcatcatctaagtgtggtgattt 36234018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 21570606 - 21570477
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || ||||| |||    
T  21570606 tttgggtcaattcttgacctgaaatcacccctcttcatctttttctctatatttcaatctaaataagtgattttcacatagatctagatttttttttttt 21570507  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  21570506 gtgatttcatcatctaagtgtggtggtttg 21570477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 40626234 - 40626098
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||| ||||| || |||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||      
T  40626234 aggggtgattttgggtctattcttgacctgaaatcacccctcttcgtctttttctctctatttcaatctaaataagggattttcacatagatctacgt-- 40626137  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||||||| ||||||||||| ||||    
T  40626136 tttttctttgtgatttcatcatctaagtgtggtggtttg 40626098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 6173524 - 6173643
Alignment:
Q  86 attcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttca 185  Q
    |||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  6173524 attcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggtt-tttttctttgtgatttca 6173622  T
Q  186 tcatgtaagtgtggtgatttg 206  Q
    ||||  |||||||||| ||||    
T  6173623 tcatcgaagtgtggtggtttg 6173643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 32913116 - 32913252
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||||||||||||||||||||||||| | ||||| ||| |||||||| ||||||||| |||||||| |||||||||||||||||||||      
T  32913116 aggggtggttttggatcaattcttgacctgaaatcacccctcttgatccttttctctatatttcaatttaaataagtgattttcacatagatctaggt-- 32913213  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||||||| ||||||||||| ||||    
T  32913214 tttttctttgtgatttcatcatctaagtgtggtggtttg 32913252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 63 - 215
Target Start/End: Original strand, 34598856 - 34599007
Alignment:
Q  63 cgttaaggggtgactttggatcaattcttgacctgaaatcaacac-tcttcatctttttctctttatttcaatctaaataagggattttcacatagatct 161  Q
    |||| |||||||  |||||||||||||||||||| |||||||| | ||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  34598856 cgttgaggggtggttttggatcaattcttgacctcaaatcaactcatcttcatctttttctctctatttcaatctaaataagtgattttcacatagatct 34598955  T
Q  162 aggttatttttctttgtaatttcatcatgtaagtgtggtgatttgatgtccatc 215  Q
    ||  | ||||| ||||| |||||||||| ||||||||||| |||| ||| ||||    
T  34598956 ag--tttttttttttgtgatttcatcatctaagtgtggtggtttgttgttcatc 34599007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 2808677 - 2808542
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||||||||||||||| | |||||||||| ||||||| ||||||| |||||||||| ||||||||||||||||||||       
T  2808677 aggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctatttctctctatttcagtctaaataagtgattttcacatagatctagg--- 2808581  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||||||| ||||||||||| ||||    
T  2808580 tttttctttgtgatttcatcatctaagtgtggtggtttg 2808542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 86 - 206
Target Start/End: Complemental strand, 32680771 - 32680651
Alignment:
Q  86 attcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttca 185  Q
    ||||||||||||||||||    ||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||| ||||||||||| ||||||    
T  32680771 attcttgacctgaaatcactcatcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggttttttttctttgtgatttca 32680672  T
Q  186 tcatgtaagtgtggtgatttg 206  Q
    |||| ||||||||||| ||||    
T  32680671 tcatctaagtgtggtggtttg 32680651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 4192722 - 4192849
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    |||||||||||| ||||||||| |||| | |||||||||||||||||| |||||||||||||||||| |||||||||||| || |||||  |||||||||    
T  4192722 tttggatcaatttttgacctgagatcacccctcttcatctttttctctatatttcaatctaaataagtgattttcacatatatttaggt--tttttcttt 4192819  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  4192820 gtgatttcatcatctaagtgtggtggtttg 4192849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 8971835 - 8971697
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctct--ttatttcaatctaaataagggattttcacatagatctaggt 165  Q
    |||||||  ||||| ||||||||||||||||||||| | ||||||||||||||||||  |||||| |||||||||||| |||||||||||||||||||||    
T  8971835 aggggtggttttgggtcaattcttgacctgaaatcatccctcttcatctttttctctctttattttaatctaaataagtgattttcacatagatctaggt 8971736  T
Q  166 tatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
      ||||||||||| |||||||||| ||||| ||||| ||||    
T  8971735 --tttttctttgtgatttcatcatctaagtatggtggtttg 8971697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 3270435 - 3270304
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||||||||||||||||||    | ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||      
T  3270435 aggggtggttttgggtcaattcttgacctgaaatcactcattttcatctttttctttttatttcaatctaaataagtgattttcacatagatctaggt-- 3270338  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtg 201  Q
    ||||| ||||| |||||||||| |||||||||||    
T  3270337 tttttttttgtgatttcatcatctaagtgtggtg 3270304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 7015908 - 7015781
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||||||||||||| | ||| | ||||||||||||||||||||||||||||||  ||||||||||||||| |||||  |||||| ||    
T  7015908 tttgggtcaattcttgacctgaaatcacccctcctaatctttttctctttatttcaatctaaataattgattttcacatagatttaggt--tttttcctt 7015811  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  7015810 gtgatttcatcatctaagtgtggtggtttg 7015781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 4228015 - 4228136
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacac-tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctt 175  Q
    ||||| ||||||||||||||||||||| ||| ||||||| ||||| ||||||||||||| |||||||| ||||| |||||||||||| ||| ||||||||    
T  4228015 tttgggtcaattcttgacctgaaatca-cacatcttcatatttttatctttatttcaatataaataagtgatttacacatagatctatgttttttttctt 4228113  T
Q  176 tgtaatttcatcatgtaagtgtg 198  Q
    ||| |||||||||| ||||||||    
T  4228114 tgtgatttcatcatctaagtgtg 4228136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 63 - 189
Target Start/End: Complemental strand, 39642071 - 39641945
Alignment:
Q  63 cgttaaggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatcta 162  Q
    |||| ||| ||| ||||||||||||| ||||||||||||||    ||||||||||||||||| ||||||||| |||||||  ||||||||||||||||||    
T  39642071 cgttgaggagtggctttggatcaatttttgacctgaaatcacttatcttcatctttttctctctatttcaatttaaataaatgattttcacatagatcta 39641972  T
Q  163 ggttatttttctttgtaatttcatcat 189  Q
    |||| |||||||| || ||||||||||    
T  39641971 ggttttttttcttcgtgatttcatcat 39641945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 206
Target Start/End: Complemental strand, 40660121 - 40660002
Alignment:
Q  83 tcaattcttgacctgaaatcaacac-tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaat 181  Q
    ||||||||||||||||||||| ||| |||||||||||||||||  ||||||||||||||||| ||||||||||||||||||| |  ||||||||||| ||    
T  40660121 tcaattcttgacctgaaatca-cacatcttcatctttttctct--atttcaatctaaataagtgattttcacatagatctagat--tttttctttgtgat 40660027  T
Q  182 ttcatcatgtaagtgtggtgatttg 206  Q
    |||||||| ||||||||||| ||||    
T  40660026 ttcatcatctaagtgtggtgctttg 40660002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 20047279 - 20047152
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||||||||||||||||||||||||| | || ||||||||||||||| | |||||||||||||||| || ||| |||||||| |||||| |||||| ||    
T  20047279 tttggatcaattcttgacctgaaatcacc-ctattcatctttttctctctttttcaatctaaataagtgacttttacatagatttaggtt-tttttcatt 20047182  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  20047181 gtgatttcatcatctaagtgtggtggtttg 20047152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 200
Target Start/End: Complemental strand, 26025576 - 26025486
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggt 200  Q
    ||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  26025576 tcttcatctttttctctctatttcaatctaaataagtggttttcacatagatctaggt--tttttctttgtgatttcatcatgtaagtgtggt 26025486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 9986554 - 9986412
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttca--tctttttctctttatttcaatctaaataagggattttcacatagatctaggt 165  Q
    |||||||  ||||| ||||||||||||||||||||| | |||||||  | ||||| ||| || ||||||||||||||| |||||||||||||||||||||    
T  9986554 aggggtggttttgggtcaattcttgacctgaaatcatccctcttcaattttttttatctctaattcaatctaaataagtgattttcacatagatctaggt 9986455  T
Q  166 t--atttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |   ||||||||||| |||||||||| ||||||||||| ||||    
T  9986454 ttattttttctttgtgatttcatcatctaagtgtggtggtttg 9986412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 189
Target Start/End: Original strand, 27477038 - 27477148
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||| ||||| |||||||| | |||||||||||||||||| ||||||||||||||||||  |||||||||||||||||| |  |||||||||    
T  27477038 tttgggtcaattattgacatgaaatcacccctcttcatctttttctctatatttcaatctaaataagtaattttcacatagatctagat--tttttcttt 27477135  T
Q  177 gtaatttcatcat 189  Q
    || ||||||||||    
T  27477136 gtgatttcatcat 27477148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 42949605 - 42949696
Alignment:
Q  85 aattcttgacctgaaatcaacactcttcatctttt-tctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    |||||||||| |||||||| | ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  42949605 aattcttgacttgaaatcacccctcttcatcttttttctctttatttcaatctaaataagtgattttcacatagatctaggtt-tttttcttt 42949696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 3725055 - 3725191
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||| ||||||| ||||||   |||||||||||||||||| ||||||||| |||||||| ||||||||||||||||| | |      
T  3725055 aggggtggttttgggtcaatttttgacctaaaatcattcctcttcatctttttctctctatttcaatataaataagtgattttcacatagatcttgat-- 3725152  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||||| | ||||||||||| ||||    
T  3725153 tttttctttgtgatttcatcgtctaagtgtggtggtttg 3725191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 206
Target Start/End: Original strand, 41430929 - 41431039
Alignment:
Q  95 ctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaag 194  Q
    ||||||||| | |||||||||||||||||| ||||||||||||||||||  | ||| ||||||||||||| | ||||||||||| |||||||||| ||||    
T  41430929 ctgaaatcacccctcttcatctttttctctatatttcaatctaaataagtcacttttacatagatctagg-tgtttttctttgtgatttcatcatctaag 41431027  T
Q  195 tgtggtgatttg 206  Q
    ||||||| ||||    
T  41431028 tgtggtggtttg 41431039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 201
Target Start/End: Original strand, 27949299 - 27949432
Alignment:
Q  69 ggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg-tta 167  Q
    ||||||| |||||  |||||||||||||||||||| |||| |||||| ||||| || | |||||||||||||||| |||||||||||||||||||| ||     
T  27949299 ggggtgattttgggacaattcttgacctgaaatca-cactattcatccttttcgctctgtttcaatctaaataagtgattttcacatagatctaggtttt 27949397  T
Q  168 tttttct-ttgtaatttcatcatgtaagtgtggtg 201  Q
    ||||||| |||  |||||||||| |||||||||||    
T  27949398 tttttctattgcgatttcatcatctaagtgtggtg 27949432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 8805781 - 8805877
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||||||| |||||||||  ||||||||||| |||||||||| | ||||||||| ||||    
T  8805781 tcttcatatttttctctttatttcaatttaaataagtgattttcacatggatctaggt--tttttctttgtgatttcatcatctgagtgtggtggtttg 8805877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 22421659 - 22421746
Alignment:
Q  117 ttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||| |||||||||||||||||| || ||||||||||||||||||  ||||||||||| |||||||||| ||||||||||| ||||    
T  22421659 ttttctctctatttcaatctaaataagtgactttcacatagatctaggt--tttttctttgtgatttcatcatctaagtgtggtggtttg 22421746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 41712972 - 41712835
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| | |||||||||| |||||||| |  | |||||| |||||||| ||||| |||||||||||| ||||||||||||||| ||||||     
T  41712972 aggggtggttttgggttaattcttgacgtgaaatcacccattttcatcattttctctctattttaatctaaataagtgattttcacatagatttaggtt- 41712874  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||| ||| ||||| |||| ||||||||||| ||||    
T  41712873 tttttctctgtgatttcctcatctaagtgtggtggtttg 41712835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 459481 - 459361
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||| |||||||||||||| | ||||||||| |||||||| ||||||| | |||||||| ||||||||||||||| ||||||     
T  459481 aggggtggttttgggtcaatttttgacctgaaatcacccctcttcatccttttctctctatttcattttaaataagcgattttcacatagatataggtt- 459383  T
Q  168 tttttctttgtaatttcatcat 189  Q
    |||||||| || ||||| ||||    
T  459382 tttttcttcgtgatttcgtcat 459361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 31581887 - 31581808
Alignment:
Q  107 ctcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatca 188  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||  | ||||||||| | |||||||||    
T  31581887 ctcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctag--tttttttctttttgatttcatca 31581808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 25086908 - 25087048
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaata----agggattttcacatagatctag 163  Q
    |||||||  ||||| |||||| |||||||||||||| | |||||||||||||||  | ||||| |||||| |||    || |||||||||||||||||||    
T  25086908 aggggtggttttgggtcaattattgacctgaaatcacccctcttcatctttttccatctatttgaatctatataagtgagtgattttcacatagatctag 25087007  T
Q  164 gttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||  ||||| ||| | |||||||||| ||||||||||| ||||    
T  25087008 gt--tttttatttttgatttcatcatctaagtgtggtggtttg 25087048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 3269251 - 3269186
Alignment:
Q  136 taaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtg 201  Q
    |||||||| |||||||||||||||||||||| ||||| ||||| |||||||||| |||||||||||    
T  3269251 taaataagtgattttcacatagatctaggttttttttttttgtgatttcatcatctaagtgtggtg 3269186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 3269810 - 3269745
Alignment:
Q  136 taaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtg 201  Q
    |||||||| |||||||||||||||||||||| ||||| ||||| |||||||||| |||||||||||    
T  3269810 taaataagtgattttcacatagatctaggttttttttttttgtgatttcatcatctaagtgtggtg 3269745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 200
Target Start/End: Complemental strand, 32197961 - 32197871
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggt 200  Q
    ||||||||||||||||||||||||||| |||||||  ||||||  |||| || |||||  ||||||||||| ||||| |||| ||||||||||    
T  32197961 tcttcatctttttctctttatttcaatataaataaatgatttttgcataaatttaggt--tttttctttgtgatttcgtcatctaagtgtggt 32197871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 166
Target Start/End: Original strand, 17319208 - 17319295
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtt 166  Q
    ||||| |||||| |||||||||||||| | ||| |||| ||||||| | |||||||||||||||||   |||||||||||||||||||||    
T  17319208 tttgggtcaatttttgacctgaaatcatccctcctcat-tttttctatctatttcaatctaaataact-attttcacatagatctaggtt 17319295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 9374747 - 9374668
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatcta 162  Q
    ||||| |||||| ||||| ||||||||||| ||||||||||||||      |||| || ||||||||||||||||||||| |||||    
T  9374747 tttgggtcaatttttgacatgaaatcaacattcttcatctttttc------tttctatttaaataagggattttcacataaatcta 9374668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 18694961 - 18695014
Alignment:
Q  108 tcttcatcttttt-ctctttatttcaatctaaataagggattttcacatagatc 160  Q
    ||||||||||||| |||| |||||||||||||||||| |||||| |||||||||    
T  18694961 tcttcatcttttttctctctatttcaatctaaataagtgatttttacatagatc 18695014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 156
Target Start/End: Original strand, 3308791 - 3308881
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatcttttt--ctctttatttcaatctaaataagggattttcacata 156  Q
    |||||||| ||| | |||||| |||||||  ||||| | || | |||||||||  | ||||||||||||||||||||| ||||||||||||    
T  3308791 aggggtgattttaggtcaatttttgacctagaatcacccctttgcatcttttttcccctttatttcaatctaaataagtgattttcacata 3308881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 30923664 - 30923589
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatc 160  Q
    |||||| |||||| ||||||| |  |||||||||||| ||||  ||||||||||||||||  |||||| |||||||||    
T  30923664 tcaatttttgacccgaaatcacccatcttcatcttttactct--atttcaatctaaataaatgatttttacatagatc 30923589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 24587597 - 24587662
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataa 142  Q
    ||||| |||||| ||||||  |||||| | |||||||||||||| ||| ||||||||| |||||||    
T  24587597 tttgggtcaatttttgacccaaaatcacctctcttcatctttttatctatatttcaatttaaataa 24587662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 10237445 - 10237370
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatcttttt--ctctttatttcaatctaaataagggattttcacata 156  Q
    |||||| |||||||  ||||| | |||| |||||||||  | |||| |||||||||||||||| ||||||||||||    
T  10237445 tcaatttttgacctagaatcacccctctacatcttttttcccctttctttcaatctaaataagtgattttcacata 10237370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 14955390 - 14955465
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatcttttt--ctctttatttcaatctaaataagggattttcacata 156  Q
    |||||| |||||||  ||||| | |||| |||||||||  |||||| |||||||||||||||| ||||| ||||||    
T  14955390 tcaatttttgacctagaatcatccctctgcatcttttttcctctttctttcaatctaaataagtgatttccacata 14955465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 23933818 - 23933778
Alignment:
Q  116 tttttctctttatttcaatctaaataagggattttcacata 156  Q
    |||||| ||||||||||||||||||||| || |||||||||    
T  23933818 tttttccctttatttcaatctaaataagtgactttcacata 23933778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 2e-51; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 44907606 - 44907468
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||     
T  44907606 aggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaacaagtgattttcacatagatctaggttt 44907507  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  44907506 tttttctttgtaatttcatcatctaagtgtggtgatttg 44907468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 32607345 - 32607473
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||||||||||| | | ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  32607345 tttgggtcaattcttgacctgaaat-acccctcttcatcattttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttcttt 32607443  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||||| ||||||||||||||||    
T  32607444 gtaatttcatcatctaagtgtggtgatttg 32607473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 36905998 - 36906126
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||||||||||||| |  ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||| |||||||||    
T  36905998 tttgggtcaattcttgacctgaaatcacccttcttcatctttttctctttatttcaatataaataagtgattttcacatagatttaggtt-tttttcttt 36906096  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||||| ||||||||||||||||    
T  36906097 gtaatttcatcatctaagtgtggtgatttg 36906126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 14464384 - 14464514
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatct-aggttatttttctt 175  Q
    ||||| ||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||||||    
T  14464384 tttgggtcaattcttgacctgaaatcacccctattcatctttttctctttatttcaatctaaataagtgattttcacatagatctaagtttttttttctt 14464483  T
Q  176 tgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||| |||||||| | ||||||||||||||||    
T  14464484 tgtgatttcatcttctaagtgtggtgatttg 14464514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 25631734 - 25631596
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||| ||||||| |||||| | |||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||     
T  25631734 aggggtggttttgggtcaatttttgacctaaaatcatccctctccatctttttctctctatttcaatctaaataagtgattttcacatagatctaggttt 25631635  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||||||| ||||||||||| ||||    
T  25631634 tttttctttgtgatttcatcatctaagtgtggtggtttg 25631596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 12115976 - 12116100
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg--ttatttttctttgtaa 180  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||  || |||||||||||||    
T  12115976 tcaattcttgacctgaaatcatctctcttcatcttttcctctttatttcaatctaaataagtgattttcacaaagatctaggttttttttttctttgtaa 12116075  T
Q  181 tttcatcatgtaagtgtggtgattt 205  Q
    |||||| || |||||||||||||||    
T  12116076 tttcattatctaagtgtggtgattt 12116100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 69 - 206
Target Start/End: Original strand, 29503331 - 29503466
Alignment:
Q  69 ggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttat 168  Q
    ||||||| ||||| ||||||||||||||||||||| |  ||||||| ||||||||| |||||||||||||||||  |||||||||||||||||||||  |    
T  29503331 ggggtgattttgggtcaattcttgacctgaaatcacccatcttcatatttttctctatatttcaatctaaataattgattttcacatagatctaggt--t 29503428  T
Q  169 ttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||| |||||||||| ||||||||||| ||||    
T  29503429 ttttctttgtgatttcatcatctaagtgtggtggtttg 29503466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 83 - 206
Target Start/End: Complemental strand, 35499394 - 35499268
Alignment:
Q  83 tcaattcttgacctgaaatcaacac-tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg--ttatttttctttgta 179  Q
    |||||| || ||||||||||| | | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  || ||||||||||||    
T  35499394 tcaattttttacctgaaatcaccccctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttttctttgta 35499295  T
Q  180 atttcatcatgtaagtgtggtgatttg 206  Q
    ||||||| || ||||||||||||||||    
T  35499294 atttcattatctaagtgtggtgatttg 35499268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 4172434 - 4172571
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||| || | |||||| |  ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||     
T  4172434 aggggtggttttgggtcaattcttaacataaaatcatccatcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggtt- 4172532  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||||||| ||||||||||| ||||    
T  4172533 tttttctttgtgatttcatcatctaagtgtggtggtttg 4172571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 50611615 - 50611495
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||| ||||||| |||||| | |||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  50611615 tttgggtcaattattgacctaaaatcacccctcttcatctttttctctatatttcaatctaaataagtgattttcatatagatctaggtt-tttttcttt 50611517  T
Q  177 gtaatttcatcatgtaagtgtg 198  Q
    || |||||||||| ||||||||    
T  50611516 gtgatttcatcatctaagtgtg 50611495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 171
Target Start/End: Complemental strand, 3850653 - 3850559
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttt 171  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||| ||||    
T  3850653 tttggatcaattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggttttttt 3850559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 4178432 - 4178569
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||||||||||| |||||| |  ||||||||||||||||| |||||||||||||||||| |||||||| ||| |||||| ||     
T  4178432 aggggtggttttgggtcaattcttgacctaaaatcacccatcttcatctttttctctctatttcaatctaaataagtgattttcagataaatctagctt- 4178530  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||||||| ||||||||||| ||||    
T  4178531 tttttctttgtgatttcatcatctaagtgtggtggtttg 4178569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 39917594 - 39917467
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||||||||||||| |  ||||||| ||||||||| || ||||||||||||||| |||||||||||||||||||||  |||||| ||    
T  39917594 tttgggtcaattcttgacctgaaatcatccatcttcatatttttctctctaattcaatctaaataagtgattttcacatagatctaggt--tttttcctt 39917497  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  39917496 gtgatttcatcatctaagtgtggtggtttg 39917467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 38855226 - 38855114
Alignment:
Q  86 attcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttca 185  Q
    ||||||||||  |||||| | |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| || ||||||||||| ||||||    
T  38855226 attcttgaccgaaaatcacccctcttcatctttttctctctatatcaatctaaataagtgattttcacatagatctagattttttttctttgtgatttca 38855127  T
Q  186 tcatgtaagtgtg 198  Q
    |||| ||||||||    
T  38855126 tcatctaagtgtg 38855114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 206
Target Start/End: Original strand, 2342355 - 2342496
Alignment:
Q  63 cgttaaggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatcta 162  Q
    |||| |||||||  ||||| ||||||||  ||||||| ||||| |||||||||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  2342355 cgttgaggggtggttttgggtcaattctaaacctgaa-tcaaccctcttcatctttttctctctatttcaatctaaataagtgattttcacatatatcta 2342453  T
Q  163 ggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
      || ||||||||||| |||||||||| ||||||||||| ||||    
T  2342454 tatt-tttttctttgtgatttcatcatctaagtgtggtggtttg 2342496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 200
Target Start/End: Original strand, 25162319 - 25162434
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatt 182  Q
    |||||||||||  |||||||| |  ||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||| ||||||||||| |||    
T  25162319 tcaattcttgatttgaaatcacccatcttcatctttttctctctatttcaatctaaataagtga-tttcacatagatctaggtt-tttttctttgtgatt 25162416  T
Q  183 tcatcatgtaagtgtggt 200  Q
    ||||||| ||||||||||    
T  25162417 tcatcatctaagtgtggt 25162434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 206
Target Start/End: Original strand, 17237685 - 17237809
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg-ttatttttctttgtaat 181  Q
    |||||||||||||| ||||||    ||||||||| ||||||| |||||||||||||||||| ||||||||||||||| |||| || ||||||||||| ||    
T  17237685 tcaattcttgacctaaaatcattcatcttcatctgtttctctctatttcaatctaaataagtgattttcacatagatttaggtttttttttctttgtgat 17237784  T
Q  182 ttcatcatgtaagtgtggtgatttg 206  Q
    |||||||| ||||||||||| ||||    
T  17237785 ttcatcatctaagtgtggtggtttg 17237809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 206
Target Start/End: Complemental strand, 38440769 - 38440648
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatt 182  Q
    |||||||||||||||||||||   ||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||  ||||||||| | |||    
T  38440769 tcaattcttgacctgaaatcactcctctttatctttttctctctatttcaatctaaataagtgattttcacatagatctaggt--tttttctttttgatt 38440672  T
Q  183 tcatcatgtaagtgtggtgatttg 206  Q
    |||| ||  |||||||||| ||||    
T  38440671 tcatgatcaaagtgtggtggtttg 38440648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 206
Target Start/End: Original strand, 46934525 - 46934646
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatt 182  Q
    |||||| |||||||||||||| | |||||||||||| ||||| |||||||||||||||||| |||||||||||||||| ||||  ||||||||  | |||    
T  46934525 tcaatttttgacctgaaatcacccctcttcatctttctctctctatttcaatctaaataagtgattttcacatagatccaggt--tttttcttgttgatt 46934622  T
Q  183 tcatcatgtaagtgtggtgatttg 206  Q
    ||||||| ||||||||||| ||||    
T  46934623 tcatcatctaagtgtggtggtttg 46934646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 49552421 - 49552294
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||||||||||||| | ||||||||| |||| ||| |||||||||||||||||| || ||||||||  ||||||||  |||||||||    
T  49552421 tttgggtcaattcttgacctgaaatcacccctcttcatcattttttctctatttcaatctaaataagtgaatttcacattaatctaggt--tttttcttt 49552324  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||| ||||||| ||||    
T  49552323 gtgatttcatcatctaaatgtggtggtttg 49552294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 51202456 - 51202324
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg-tt 166  Q
    |||||||| ||||| ||||||||||||||||||||| |  ||||||| ||||||||| |||||||||||||       ||||||||||||||||||| ||    
T  51202456 aggggtgattttgggtcaattcttgacctgaaatcacccatcttcatatttttctctctatttcaatctaa-------attttcacatagatctaggttt 51202364  T
Q  167 atttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
     ||||||||||| |||||||||| ||||||||||| ||||    
T  51202363 ttttttctttgtgatttcatcatctaagtgtggtggtttg 51202324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 22802890 - 22802988
Alignment:
Q  69 ggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataaggga-ttttcacatagatctaggtt 166  Q
    ||||||| ||||| |||||| ||||| ||||||||   |||||||||||||||||| |||||||||||||||||| || ||||||| ||||||||||||    
T  22802890 ggggtgattttgggtcaatttttgacatgaaatcactcctcttcatctttttctctctatttcaatctaaataagtgatttttcacgtagatctaggtt 22802988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 68 - 163
Target Start/End: Original strand, 37169098 - 37169194
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataaggga-ttttcacatagatctag 163  Q
    |||||||| |||||||||||| || ||||||||||| | ||||||| |||||||||| || |||||| |||||||| || |||||||||||||||||    
T  37169098 aggggtgattttggatcaattttttacctgaaatcacctctcttcacctttttctctctaattcaatataaataagtgatttttcacatagatctag 37169194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 21487994 - 21488073
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatcta 162  Q
    |||||| |||||||||||||| || |||||||||||||||||  ||||||||||||||||| || |||||| ||||||||    
T  21487994 tcaatttttgacctgaaatcaccaatcttcatctttttctctccatttcaatctaaataagtgactttcacgtagatcta 21488073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 77 - 166
Target Start/End: Original strand, 46178453 - 46178543
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataag-ggattttcacatagatctaggtt 166  Q
    ||||| ||||||  ||||||||||||| | |||||||||||||||||| || ||||||||||||||| |  ||||||||||||||||||||    
T  46178453 tttgggtcaatttatgacctgaaatcatccctcttcatctttttctctctaattcaatctaaataagtgctttttcacatagatctaggtt 46178543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 30648860 - 30648789
Alignment:
Q  134 tctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||| || |||||||||||||||| || ||||||||||| |||||||||| ||||||||||| ||||    
T  30648860 tctaaataagtgactttcacatagatctagttt-tttttctttgtgatttcatcatctaagtgtggtggtttg 30648789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 166
Target Start/End: Original strand, 42719406 - 42719486
Alignment:
Q  86 attcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtt 166  Q
    ||||||||||||||||||    ||||| | ||||||||| ||||||||| |||||||| ||||||||  ||||||||||||    
T  42719406 attcttgacctgaaatcactcatcttcgtatttttctctctatttcaatttaaataagtgattttcatgtagatctaggtt 42719486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 30829892 - 30829940
Alignment:
Q  118 tttctctttatttcaatctaaataagggattttcacatagatctaggtt 166  Q
    ||||||| |||||||||| |||| ||||||||| |||||||||||||||    
T  30829892 tttctctctatttcaatccaaatgagggattttgacatagatctaggtt 30829940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 31793996 - 31794040
Alignment:
Q  117 ttttctctttatttcaatctaaataagggattttcacatagatct 161  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||    
T  31793996 ttttttctctatttcaatctaaataagtgattttcacatagatct 31794040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 36735344 - 36735277
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggatttt 150  Q
    |||||| || ||||||||||| | |||||||| ||| ||||| ||||||||| |||||||| ||||||    
T  36735344 tcaattttttacctgaaatcatccctcttcatttttctctctatatttcaatttaaataagtgatttt 36735277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 6913311 - 6913255
Alignment:
Q  110 ttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtt 166  Q
    ||||||| ||||||| | |||||||||| ||| | |||||||||||||||| |||||    
T  6913311 ttcatctctttctctatgtttcaatctagataggtgattttcacatagatcgaggtt 6913255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 1e-49; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 5701131 - 5701270
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg-tt 166  Q
    |||||||||||||| ||||| ||||||||||||||| | |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||    
T  5701131 aggggtgactttgggtcaatacttgacctgaaatcacccctcttcatctttttctctttatttcaatttaaataagtgattttcacatagatctaggttt 5701230  T
Q  167 atttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
     |||||||||||||||||||||| ||||||||||||||||    
T  5701231 ttttttctttgtaatttcatcatctaagtgtggtgatttg 5701270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 30878949 - 30879087
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||| ||||||||| |||| | |||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||     
T  30878949 aggggtggttttgggtcaatttttgacctgagatcatctctcttcatctttttctctttattttaatctaaataagtgattttcacatagatctatgttt 30879048  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  30879049 tttttctttgtaatttcatcatttaagtgtggtgatttg 30879087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 20266185 - 20266313
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||| || |||||| |  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||    
T  20266185 tttgggtcaattcttgatctaaaatcacccatcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagctt-tttttcttt 20266283  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||||| ||||||||||||||||    
T  20266284 gtaatttcatcatctaagtgtggtgatttg 20266313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 35584828 - 35584688
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg--t 165  Q
    |||||||| ||||| ||||||||| |||||||||||    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |    
T  35584828 aggggtgattttgggtcaattcttaacctgaaatcactcatcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttt 35584729  T
Q  166 tatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    | |||||||||||||||| || || ||||||||||||||||    
T  35584728 tttttttctttgtaattttataatctaagtgtggtgatttg 35584688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 51868835 - 51868715
Alignment:
Q  85 aattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttc 184  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||| ||||||||||| |||||    
T  51868835 aattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggtt-tttttctttgtgatttc 51868737  T
Q  185 atcatgtaagtgtggtgatttg 206  Q
    ||||| ||||||||||| ||||    
T  51868736 atcatctaagtgtggtggtttg 51868715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 69 - 201
Target Start/End: Complemental strand, 25406490 - 25406359
Alignment:
Q  69 ggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttat 168  Q
    ||||||| ||||| |||||||||||||||||||||   |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||| |    
T  25406490 ggggtgattttgggtcaattcttgacctgaaatcacacctcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggtt-t 25406392  T
Q  169 ttttctttgtaatttcatcatgtaagtgtggtg 201  Q
    |||||||||| ||||| |||| |||||||||||    
T  25406391 ttttctttgtgatttcgtcatctaagtgtggtg 25406359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 7997661 - 7997800
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg-tt 166  Q
    |||||||  ||||| | |||| |||| ||||||||| |  ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||    
T  7997661 aggggtggttttgggttaatttttgatctgaaatcacccttcttcatctttttctctttatttcaatataaataagtgattttcacatagatctaggttt 7997760  T
Q  167 atttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
     |||||||||||||||||||||| ||||||||||||||||    
T  7997761 ttttttctttgtaatttcatcatctaagtgtggtgatttg 7997800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 19716094 - 19715966
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg--ttatttttct 174  Q
    ||||| ||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||  || ||||||     
T  19716094 tttgggtcaattcttgatctgaaatcacc-ctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatttaggttttttttttca 19715996  T
Q  175 ttgtaatttcatcatgtaagtgtggtgatt 204  Q
    ||||||||||||||| ||||||||||||||    
T  19715995 ttgtaatttcatcatctaagtgtggtgatt 19715966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 40646562 - 40646692
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||||||||||| ||||||    ||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||     
T  40646562 aggggtggttttgggtcaattcttgacctaaaatcactcatcttcatctttttctatttatttcaatctaaataagtgattttcacgtagatctaggttt 40646661  T
Q  168 tttttctttgtaatttcatcatgtaagtgtg 198  Q
    |||||||||||||||||||||| ||||||||    
T  40646662 tttttctttgtaatttcatcatctaagtgtg 40646692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 28035022 - 28035150
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||| ||||||||||||||    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  28035022 tttgggtcaattattgacctgaaatcactcatcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggtt-tttttcttt 28035120  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  28035121 gtgatttcatcatctaagtgtggtggtttg 28035150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 50272338 - 50272210
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||| |||||||||    
T  50272338 tttgggtcaattcttgacctgaaatcacccctattcatctttttctctttatttcaatctaaataagtaattttcacatagatctaagtt-tttttcttt 50272240  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||| | ||||| ||||||||||    
T  50272239 gtgatttcatcttctaagtttggtgatttg 50272210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 83 - 206
Target Start/End: Original strand, 14545409 - 14545530
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatt 182  Q
    |||||||||||||||||||||    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||  ||||||||||| |||    
T  14545409 tcaattcttgacctgaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatagatctaggt--tttttctttgtgatt 14545506  T
Q  183 tcatcatgtaagtgtggtgatttg 206  Q
    ||||||| ||||||||||| ||||    
T  14545507 tcatcatctaagtgtggtggtttg 14545530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 50148246 - 50148390
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg-tt 166  Q
    |||||||  ||||| |||||||| || ||||||||| |  |||||||| |||||||||||||| |||||||||||| |||||||||||||||||||| ||    
T  50148246 aggggtggttttgggtcaattctagatctgaaatcatccatcttcatccttttctctttattttaatctaaataagtgattttcacatagatctaggttt 50148345  T
Q  167 atttttctttgtaatttcatcatgtaagtgtggtgatttgatgtc 211  Q
     |||||||||||||||||||| | |||||||||||||||| ||||    
T  50148346 ttttttctttgtaatttcatcttctaagtgtggtgatttgttgtc 50148390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 51871747 - 51871874
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||||||||||| |||||| | |||||||||||||||||| |||||||||||||||||| || |||||||||||||||| |  |||||||||    
T  51871747 tttgggtcaattcttgacctaaaatcacccctcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctagct--tttttcttt 51871844  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  51871845 gtgatttcatcatctaagtgtggtggtttg 51871874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 25728157 - 25728062
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttattttt 172  Q
    ||||| |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  25728157 tttgggtcaattcttgacctgaaatcactcctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggtttttttt 25728062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 30818543 - 30818416
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||| |||||||||||||| |  ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||  | ||||| |||    
T  30818543 tttgggtcaattattgacctgaaatcacccatcttcatctttttctctctatttcaatctaaataagtgattttcacataaatctag--ttttttttttt 30818446  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  30818445 gtgatttcatcatctaagtgtggtggtttg 30818416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 40881211 - 40881082
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||||||||||| ||||||    ||||||||||||||||| ||||||||||||||| || ||||||||| |||||||||||| ||||| |||    
T  40881211 tttgggtcaattcttgacctaaaatcactcatcttcatctttttctctctatttcaatctaaatgagtgattttcacttagatctaggtttttttttttt 40881112  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    |  |||||||||| ||||||||||| ||||    
T  40881111 gagatttcatcatctaagtgtggtggtttg 40881082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 9172371 - 9172501
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctt- 175  Q
    ||||| ||||||||||||||||||||| | |||||||| ||||| ||| |||||||||||||||||| || ||||||||||||||||||| ||||||||     
T  9172371 tttgggtcaattcttgacctgaaatcacccctcttcatatttttttctctatttcaatctaaataagtgactttcacatagatctaggtt-tttttcttt 9172469  T
Q  176 -tgtaatttcatcatgtaagtgtggtgatttg 206  Q
     ||| |||| ||||| ||||||||||| ||||    
T  9172470 gtgtgattttatcatctaagtgtggtggtttg 9172501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 9180353 - 9180483
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctt- 175  Q
    ||||| ||||||||||||||||||||| | |||||||| ||||| ||| |||||||||||||||||| || ||||||||||||||||||| ||||||||     
T  9180353 tttgggtcaattcttgacctgaaatcacccctcttcatatttttttctctatttcaatctaaataagtgactttcacatagatctaggtt-tttttcttt 9180451  T
Q  176 -tgtaatttcatcatgtaagtgtggtgatttg 206  Q
     ||| |||| ||||| ||||||||||| ||||    
T  9180452 gtgtgattttatcatctaagtgtggtggtttg 9180483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 5324764 - 5324628
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||| ||| ||||| ||||||||||||||| ||||| | |||||||||||||||||| |||||||||||||||||| ||||||||| || || || ||      
T  5324764 agggatgattttgggtcaattcttgacctggaatcacctctcttcatctttttctctctatttcaatctaaataagtgattttcacgtaaatttaagt-- 5324667  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||| |||||| |||||||||| ||||||||||| ||||    
T  5324666 ttttcctttgtgatttcatcatctaagtgtggtggtttg 5324628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 33291626 - 33291488
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttca-tctttttctctttatttcaatctaaataagggattttcacatagatctaggtt 166  Q
    |||||||  ||||| ||||||||||||||||||||| | ||||||| | ||||||| | ||||||||| |||||||| |||||||||||| ||||| |||    
T  33291626 aggggtggttttgggtcaattcttgacctgaaatcacccctcttcattttttttctttctatttcaatataaataagtgattttcacataaatctatgtt 33291527  T
Q  167 atttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
     ||||||||||| |||||||||| ||||||||||| ||||    
T  33291526 -tttttctttgtgatttcatcatctaagtgtggtggtttg 33291488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 19723216 - 19723344
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatcttttt-ctctttatttcaatctaaataagggattttcacatagatctaggttatttttctt 175  Q
    ||||| |||||| ||||| |||||||| | |||||||| ||||| |||| |||| ||||||||||||| |||||||||||||||||||||| ||||||||    
T  19723216 tttgggtcaattattgacttgaaatcacctctcttcatattttttctctctatt-caatctaaataagtgattttcacatagatctaggtt-tttttctt 19723313  T
Q  176 tgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||| |||||||||| ||||||||||| ||||    
T  19723314 tgtgatttcatcatctaagtgtggtggtttg 19723344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 31836745 - 31836818
Alignment:
Q  133 atctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  31836745 atctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttg 31836818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 9919302 - 9919400
Alignment:
Q  107 ctcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||| ||||||||||| |||||| ||| ||||||||||| ||||    
T  9919302 ctcttcatctttttctctctatttcaatctaaataagtgatttttacatagatctatgtt-tttttctttgtgatttcaccatctaagtgtggtggtttg 9919400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 206
Target Start/End: Original strand, 11453824 - 11453946
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctcttt--atttcaatctaaataagggattttcacatagatctaggttatttttctttgtaa 180  Q
    |||||| ||||| |||||||| | |||||||||||||||||| |  ||||||||||||||||| | |||||||||||||||||||  ||||||||||| |    
T  11453824 tcaatttttgacttgaaatca-ctctcttcatctttttctctctctatttcaatctaaataagtggttttcacatagatctaggt--tttttctttgtga 11453920  T
Q  181 tttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||| ||||||||||| ||||    
T  11453921 tttcatcatctaagtgtggtggtttg 11453946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 27872622 - 27872749
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||| ||||| |||||||| |  |||||||||||||| || |||||||||||||||||| |||||||||||||||||| ||  ||||||||     
T  27872622 tttgggtcaatttttgacatgaaatcacccatcttcatctttttcgctctatttcaatctaaataagtgattttcacatagatctaagt--tttttcttc 27872719  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || ||| |||||| ||||||||||| ||||    
T  27872720 gtgattgcatcatctaagtgtggtggtttg 27872749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 38520731 - 38520604
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    |||||||||||| || |||||||||||    ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||| ||  ||||||||     
T  38520731 tttggatcaattttttacctgaaatcactcatcttcatctttttctctctatttcgatctaaataagtgattttcacatagatctatgt--tttttcttc 38520634  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| |||| |||||| ||||    
T  38520633 gtgatttcatcatctaagagtggtggtttg 38520604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 7342605 - 7342733
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||| |||||||||||||| | |||||||| ||||| | | |||||||||||||||||| || ||| || |||||||| ||| |||||||||    
T  7342605 tttgggtcaatttttgacctgaaatcacccctcttcatatttttttatctatttcaatctaaataagtgacttttacgtagatctatgtt-tttttcttt 7342703  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  7342704 gtgatttcatcatctaagtgtggtggtttg 7342733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 18569517 - 18569385
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||| |||||  ||||||| |  ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||     
T  18569517 aggggtggttttgggtcaatttttgacaagaaatcacctgtcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggtt- 18569419  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtg 201  Q
    || ||||| || ||||| |||| | |||||||||    
T  18569418 ttcttcttcgtgatttcgtcatttgagtgtggtg 18569385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 50166297 - 50166169
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||| ||||||||||||   | ||||| |||||||||| | |||||||||||||||||| || |||||||||||| |||||| ||||||| |    
T  50166297 tttgggtcaattattgacctgaaattgcccctctttatctttttctatctatttcaatctaaataagtgaatttcacatagatttaggtt-tttttctat 50166199  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  50166198 gtgatttcatcatctaagtgtggtggtttg 50166169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 115 - 206
Target Start/End: Original strand, 34519054 - 34519143
Alignment:
Q  115 ctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||  ||||||||| | |||||||||| ||||||||||| ||||    
T  34519054 ctttttctctctatttcaatctaaataagtgattttcacatagatctaggt--tttttctttttgatttcatcatctaagtgtggtggtttg 34519143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 3871299 - 3871419
Alignment:
Q  85 aattcttgacctgaaatcaacac-tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaattt 183  Q
    ||||||||| ||||||||| | | | ||||||||| |||||  ||||||||||||||||| |||||||||||||||||| ||  ||||||||||| ||||    
T  3871299 aattcttgatctgaaatcacccccttttcatctttctctctcaatttcaatctaaataagtgattttcacatagatctaagt--tttttctttgtgattt 3871396  T
Q  184 catcatgtaagtgtggtgatttg 206  Q
    |||||| ||||||||||| ||||    
T  3871397 catcatctaagtgtggtggtttg 3871419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 45426260 - 45426136
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||||||||  |||||||| |  | ||||||||||||||| ||||| |||||||||||| |||||||||||||||||| |     ||| |||    
T  45426260 tttgggtcaattcttgatttgaaatcacctattttcatctttttctctctatttaaatctaaataagtgattttcacatagatctaag-----ttttttt 45426166  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  45426165 gtgatttcatcatctaagtgtggtggtttg 45426136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 44637305 - 44637429
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttc-tctttatttcaatctaaataagggattttcacatagatctaggttatttttctt 175  Q
    ||||| |||||| ||||| | |||||| | ||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||| ||  || |||||    
T  44637305 tttgggtcaatt-ttgacataaaatcacctctcttcatcttttttatctttatttcaatctaaataagtgattttcacgtagatctaagt--ttcttctt 44637401  T
Q  176 tgtaatttcatcatgtaagtgtggtgat 203  Q
    ||| ||||| |||| ||| |||||||||    
T  44637402 tgtgatttcgtcatctaaatgtggtgat 44637429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 45806007 - 45805922
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatcta 162  Q
    ||||| |||||| |||| ||||||||| |  ||||| ||||||||||| |||||||||||||||||| || ||||||||| |||||    
T  45806007 tttgggtcaatttttgatctgaaatcacctttcttcctctttttctctctatttcaatctaaataagtgactttcacataaatcta 45805922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 166
Target Start/End: Complemental strand, 7312296 - 7312207
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtt 166  Q
    ||||| |||||| ||||||| |||| |   |||||||||||||||||| ||||||||  |||||||  ||||||||| ||||||||||||    
T  7312296 tttgggtcaatttttgacctaaaattacttctcttcatctttttctctctatttcaaattaaataaatgattttcacgtagatctaggtt 7312207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 39987292 - 39987360
Alignment:
Q  96 tgaaatcaacactcttcatctttttctctttatttcaatctaaataaggga-ttttcacatagatctag 163  Q
    |||||||| | |||||||||||||||||| |  ||||||||||||||| || |||||| ||||||||||    
T  39987292 tgaaatcacctctcttcatctttttctctctgattcaatctaaataagtgatttttcatatagatctag 39987360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 189
Target Start/End: Complemental strand, 30558822 - 30558743
Alignment:
Q  107 ctcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcat 189  Q
    |||||||| ||||||| | |||||||||||||| ||| || ||||||| ||||||||||  ||||||||| | ||||||||||    
T  30558822 ctcttcatatttttctttctatttcaatctaaaaaagtga-tttcacacagatctaggt--tttttctttatgatttcatcat 30558743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 18650044 - 18649984
Alignment:
Q  113 atctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttc 173  Q
    ||||||| |||| |||||| |||||||||||  ||||||||||| || |||||| ||||||    
T  18650044 atcttttcctctctatttcgatctaaataagtaattttcacataaatataggttttttttc 18649984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 41081896 - 41081812
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctcttt-atttcaatctaaataagggattttcacatagatctaggtt 166  Q
    |||||| ||||||||||||||    |||||||||||||||  |  ||||||||||| ||||| ||||| | ||||||||||||||    
T  41081896 tcaatttttgacctgaaatcactcatcttcatctttttctagtccatttcaatctatataagtgatttgcgcatagatctaggtt 41081812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 5e-49; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 14907131 - 14906993
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||| ||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  14907131 agggatgattttggatcaattcttgacctgaaatcacccatcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttc 14907032  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||||||||||||||  || ||||||||||||    
T  14907031 tttttctttgtaatttcatcatcaaaatgtggtgatttg 14906993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 2655755 - 2655884
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||    
T  2655755 tttgggtcaattcttgacctgcaatcacccatcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagattttttttcttt 2655854  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||||| ||||||||||||||||    
T  2655855 gtaatttcatcatctaagtgtggtgatttg 2655884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 9619565 - 9619427
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||     
T  9619565 aggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatttagattt 9619466  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||| ||||||||||||||| || |||||||||||||    
T  9619465 tttttcattgtaatttcatcatctacgtgtggtgatttg 9619427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 4808841 - 4808978
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||||||||||||| | | |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||| ||     
T  4808841 aggggtggttttgggtcaattcttgacctgaaattacccctcttcatctttttttctttatttcaatgtaaataagtgattttcacatagatctagctt- 4808939  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  4808940 tttttctttgtaatttcatcatctaagtgtggtgatttg 4808978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 43890332 - 43890194
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||||||| || |||||||||||||| | ||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||| ||     
T  43890332 aggggtggttttggatcattttttgacctgaaatcacccctcttcatctttttctctttaattcaatctaaataagtgattttgacatagatctagattt 43890233  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  43890232 tttttctttgtaatttcatcatctaagtatggtgatttg 43890194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 9498808 - 9498669
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg--t 165  Q
    |||||||  ||||| ||||||||| ||||||||||| | |||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||  |    
T  9498808 aggggtggttttgggtcaattctt-acctgaaatcacccctcttcatctttttatctttatttcaatctaaataagtgattttcacatagatttaggttt 9498710  T
Q  166 tatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    | |||||||||||||||||||||| ||||||||||||||||    
T  9498709 tttttttctttgtaatttcatcatctaagtgtggtgatttg 9498669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 68 - 215
Target Start/End: Original strand, 11725559 - 11725704
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||      
T  11725559 aggggtggttttgggtcaattcttgacctgaaatcacccctcttcgtctttttctctttatttcaatctaaataagtgtttttcacatagatctaggt-- 11725656  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttgatgtccatc 215  Q
    ||||||||| | |||||||||| ||||||||||| |||| ||| ||||    
T  11725657 tttttctttttgatttcatcatctaagtgtggtggtttgttgttcatc 11725704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 65 - 206
Target Start/End: Original strand, 11464046 - 11464185
Alignment:
Q  65 ttaaggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg 164  Q
    ||||||||||  ||| | ||||||||||||||||||||| | ||||||||  | |||||||||||||||| | |||||| |||||||||||||||||||     
T  11464046 ttaaggggtggttttaggtcaattcttgacctgaaatcacccctcttcat--tcttctctttatttcaatttgaataagtgattttcacatagatctaga 11464143  T
Q  165 ttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||||||||||||||| ||||||||||||||||    
T  11464144 ttttttttctttgtaatttcatcatctaagtgtggtgatttg 11464185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 42448235 - 42448104
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| | ||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| ||||| || |||||||||||||     
T  42448235 aggggtggttttgggttaattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagtgatttacatatagatctaggttt 42448136  T
Q  168 tttttctttgtaatttcatcatgtaagtgtgg 199  Q
    | ||||||||| |||||||||| |||||||||    
T  42448135 tgtttctttgtgatttcatcatctaagtgtgg 42448104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 44577913 - 44578050
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||| ||||||| ||||||   |||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||     
T  44577913 aggggtggttttgggtcaatttttgacctaaaatcactcctcttcatctttttctctctatttcaatctaactaagtgatttacacatagatctaggtt- 44578011  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  44578012 tttttctttgtaatttcatcatctaagtgtggtggtttg 44578050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 63 - 206
Target Start/End: Original strand, 11196764 - 11196903
Alignment:
Q  63 cgttaaggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatcta 162  Q
    |||| |||||||  ||||| ||||||||||||||||||||| |  |||||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  11196764 cgttgaggggtggttttgggtcaattcttgacctgaaatcatccatcttcatctttttctct--atttcaatctaaataagtgattttcacatagatcta 11196861  T
Q  163 ggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||  ||||||||| | |||||||||| ||||||||||| ||||    
T  11196862 ggt--tttttctttttgatttcatcatctaagtgtggtggtttg 11196903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 33895967 - 33896096
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||| || || ||| | |||||||||||||||||| ||||| |||||||||||| || ||||||||||||||||||| |||||||||    
T  33895967 tttgggtcaattcttgatctaaagtcacccctcttcatctttttctctctatttaaatctaaataagtgactttcacatagatctaggttttttttcttt 33896066  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  33896067 gtgatttcatcatctaagtgtggtggtttg 33896096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 9072603 - 9072732
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||| ||||| |||||||| | |||||||||||||||||| ||||||||| |||||||| || ||||||||| |||||| || |||||||||    
T  9072603 tttgggtcaatttttgacttgaaatcacccctcttcatctttttctctctatttcaatttaaataagtgactttcacataaatctagattttttttcttt 9072702  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  9072703 gtgatttcatcatctaagtgtggtggtttg 9072732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 70 - 198
Target Start/End: Original strand, 17949126 - 17949253
Alignment:
Q  70 gggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatt 169  Q
    |||||| ||||| |||||| |||||||||||||| | ||||||| |||||||||| |||||||||||||||||| ||||||||||||||||| | || ||    
T  17949126 gggtgattttgggtcaattattgacctgaaatcacccctcttcacctttttctctctatttcaatctaaataagcgattttcacatagatcttgatt-tt 17949224  T
Q  170 tttctttgtaatttcatcatgtaagtgtg 198  Q
    ||| ||||| |||||||||| ||||||||    
T  17949225 tttatttgtgatttcatcatctaagtgtg 17949253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 34611681 - 34611818
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||||||||||||||||||    ||||||| ||||||| | ||||||| |||||||||| |||||||||||| |||||||||     
T  34611681 aggggtggttttgggtcaattcttgacctgaaatcactcatcttcatatttttctttctatttcagtctaaataagtgattttcacataaatctaggtt- 34611779  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||||||| ||||||||||| ||||    
T  34611780 tttttctttgtgatttcatcatctaagtgtggtggtttg 34611818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 19876089 - 19876225
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||||||||||||| |    ||||||||||||||||  |||||||||||||||||| |||||||||||||||| ||||      
T  19876089 aggggtggttttgggtcaattcttgacctgaaattactcatcttcatctttttctcaatatttcaatctaaataagtgattttcacatagatcaaggt-- 19876186  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||||||| ||||||| ||| ||||    
T  19876187 tttttctttgtgatttcatcatctaagtgtagtggtttg 19876225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 44100139 - 44100004
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| || ||||||||||| |||||| | |||||||||||||||||| ||||||||||||||||||  ||||||||||||||||| ||      
T  44100139 aggggtggttttgggtcgattcttgacctaaaatcacccctcttcatctttttctctatatttcaatctaaataagttattttcacatagatctaagt-- 44100042  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||| ||||| ||||||||||| ||||    
T  44100041 tttttctttgtgattt-atcatctaagtgtggtggtttg 44100004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 35580375 - 35580471
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||  |||||||| || |||||||||| ||||||||||| ||||    
T  35580375 tcttcatctttttctctctatttcaatttaaataagtgattttcacatagatctaggt--tttttcttcgtgatttcatcatctaagtgtggtggtttg 35580471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 28239711 - 28239809
Alignment:
Q  69 ggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataag-ggattttcacatagatctaggtt 166  Q
    ||||||| ||||| |||||| |||||||||||||| | |||||||||||||||||| |||||||||||||||||| |  ||||||||||||||||||||    
T  28239711 ggggtgattttgggtcaatttttgacctgaaatcacctctcttcatctttttctctctatttcaatctaaataagtgttttttcacatagatctaggtt 28239809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 37566078 - 37565949
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttc-tctttatttcaatctaaataagggattttcacatagatctaggttatttttctt 175  Q
    ||||| |||||| |||| ||||||||| |  ||||||| |||||  ||| |||||||||||||||||  ||||||||||||||| |||||| ||||||||    
T  37566078 tttgggtcaattattgatctgaaatcacccttcttcattttttttatctctatttcaatctaaataattgattttcacatagatttaggtt-tttttctt 37565980  T
Q  176 tgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||  |||||||||| ||||||||||| ||||    
T  37565979 tgagatttcatcatctaagtgtggtggtttg 37565949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 15597359 - 15597275
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctcttt-atttcaatctaaataagggattttcacatagatctaggtt 166  Q
    |||||| |||||||||||||| | ||||||||||||||||  |  ||||||||||||||||| ||||||||||||||||||||||    
T  15597359 tcaatttttgacctgaaatcacccctcttcatctttttctagtccatttcaatctaaataagtgattttcacatagatctaggtt 15597275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 32724678 - 32724592
Alignment:
Q  85 aattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttattttt 172  Q
    |||| ||||||||||||||   ||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||| || |||||    
T  32724678 aattattgacctgaaatcacttctcttcatctttt-ctctctatttcaatctaaataagtgattttcacatagatctagatttttttt 32724592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 43192503 - 43192416
Alignment:
Q  117 ttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||| |||||||||||||||||| | |||| ||||||||||||||  |||||||| || |||||||||| ||||||||||| ||||    
T  43192503 ttttctctctatttcaatctaaataagtggtttttacatagatctaggt--tttttcttcgtgatttcatcatctaagtgtggtggtttg 43192416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 33342314 - 33342413
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataaggga-ttttcacatagatctaggtt 166  Q
    |||||||  ||||| |||||| || ||||||||||| | ||||||||| |||| ||| || ||||||||||||||| || ||||||||||||||||||||    
T  33342314 aggggtggttttgggtcaatttttaacctgaaatcacccctcttcatccttttttctctaattcaatctaaataagtgatttttcacatagatctaggtt 33342413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 16794184 - 16794289
Alignment:
Q  82 atcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataaggga-ttttcacatagatctaggttatttttctttgtaa 180  Q
    ||||||| ||||| |||||||| |  ||||||||||||||||| || ||||||||||||||| || |||||||||| |||||||   |||||||| || |    
T  16794184 atcaatttttgacttgaaatcacccatcttcatctttttctctctaattcaatctaaataagtgatttttcacataaatctagg---tttttcttcgtga 16794280  T
Q  181 tttcatcat 189  Q
    |||||||||    
T  16794281 tttcatcat 16794289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 29777115 - 29777233
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||| ||||| ||||||||   |||||||||||||||||| |||||||||||||||||| |          ||||||||||| |||||||||    
T  29777115 tttgggtcaattattgacatgaaatcactcctcttcatctttttctctctatttcaatctaaataagcg----------agatctaggtt-tttttcttt 29777203  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  29777204 gtgatttcatcatctaagtgtggtggtttg 29777233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 27747310 - 27747231
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacata 156  Q
    ||||| |||||| ||||| |||||||| || ||||||||||||| |||  |||||||| ||||||||  |||||||||||    
T  27747310 tttgggtcaatttttgacttgaaatcaccattcttcatctttttatctccatttcaatttaaataagtaattttcacata 27747231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 166
Target Start/End: Original strand, 33298794 - 33298831
Alignment:
Q  129 ttcaatctaaataagggattttcacatagatctaggtt 166  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  33298794 ttcaatctaaataagtgattttcacatagatctaggtt 33298831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 17427382 - 17427294
Alignment:
Q  111 tcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttattt-ttctttgtaatttcatcatgtaagtgtg 198  Q
    |||||||||||||| ||||||| | |||||||| | |||||| ||||||||||||| ||| ||||| || ||||| |||| | ||||||    
T  17427382 tcatctttttctctctatttcagtgtaaataagtgcttttcaaatagatctaggttttttcttcttcgttatttcgtcatatgagtgtg 17427294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 17431032 - 17430944
Alignment:
Q  111 tcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttattt-ttctttgtaatttcatcatgtaagtgtg 198  Q
    |||||||| ||||| ||| |||||||||||||| | |||||| ||||||||||||| ||| ||||| || ||||| |||| | ||||||    
T  17431032 tcatctttctctctctatgtcaatctaaataagtgcttttcagatagatctaggttttttcttcttcgttatttcgtcatctgagtgtg 17430944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 26801586 - 26801494
Alignment:
Q  91 tgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaattt 183  Q
    ||||| ||||||| ||||||||||| ||||||||  ||||||| | |||||||  |||| |||| |||||||| ||  |||||||||| ||||    
T  26801586 tgacccgaaatcaccactcttcatcattttctctcaatttcaaccgaaataagttatttccacaaagatctagattcattttctttgtgattt 26801494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 15046785 - 15046891
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctcttt-atttcaatctaaataagggattttcacatagatctaggttatttttctttgtaat 181  Q
    |||||| ||||  |||||||| | ||||||||||||||||  |  ||||||||  || |||| |||||||||||||||||||||| |||||||| || ||    
T  15046785 tcaatttttgatatgaaatcacctctcttcatctttttctagtccatttcaattcaagtaagtgattttcacatagatctaggtt-tttttcttcgtgat 15046883  T
Q  182 ttcatcat 189  Q
    ||| ||||    
T  15046884 ttcgtcat 15046891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 165
Target Start/End: Complemental strand, 39153355 - 39153255
Alignment:
Q  65 ttaaggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttct-ctttatttcaatctaaataagggattttcacatagatctag 163  Q
    |||||||||||||||| | ||||| |||||| |||||||    ||||||||||| |||  |  |||||||| |||||||| ||||||||||||||| |||    
T  39153355 ttaaggggtgactttgaaacaatttttgacc-gaaatcactcatcttcatctttgtctagtcaatttcaatttaaataagtgattttcacatagatttag 39153257  T
Q  164 gt 165  Q
    ||    
T  39153256 gt 39153255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 14912989 - 14913041
Alignment:
Q  107 ctcttcatctttttctctttatttcaatctaaataagggattttcacatagat 159  Q
    ||||| ||| ||||||||||||||||| |||||||||  ||||||| ||||||    
T  14912989 ctctttatccttttctctttatttcaacctaaataagtaattttcatatagat 14913041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 5e-49; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 46821884 - 46822022
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||     
T  46821884 aggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagattt 46821983  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  46821984 tttttctttgtaatttcatcatctaagtatggtgatttg 46822022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 46338932 - 46339061
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||||||||||| | | |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| || |||||||||    
T  46338932 tttgggtcaattcttgacctgaaattatccctcttcatctttttctctttatttcaatgtaaataagtgattttcacatagatctagcttttttttcttt 46339031  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||||| ||||||||||||||||    
T  46339032 gtaatttcatcatttaagtgtggtgatttg 46339061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 2843425 - 2843299
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||| |||    
T  2843425 tttgggtcaattcttgacctgaaaacacccctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagg---ttttttttt 2843329  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||||| ||||||||||||||||    
T  2843328 gtaatttcatcatctaagtgtggtgatttg 2843299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 23425578 - 23425442
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||      
T  23425578 aggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctatatttcaatctaaataagtgatttttacatagatctaggt-- 23425481  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||||||| ||||||||||| ||||    
T  23425480 tttttctttgtgatttcatcatttaagtgtggtggtttg 23425442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 215
Target Start/End: Complemental strand, 35496382 - 35496236
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||||||||||| |||||| || ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||     
T  35496382 aggggtggttttgggtcaattcttgacctaaaatcaccaatcttcatctttttctctctatttcaatctaattaagtgattttcacatagatctaggtt- 35496284  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttgatgtccatc 215  Q
    ||||||||||| |||||||||| ||||||||||| |||| ||| ||||    
T  35496283 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcatc 35496236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 68 - 212
Target Start/End: Original strand, 26492235 - 26492378
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||||||||||||| | | |||||||||||||||||| ||||||||| |||||||| |||||||||||||||||| |||     
T  26492235 aggggtggttttgggtcaattcttgacctgaaataacccctcttcatctttttctctctatttcaatttaaataagtgattttcacatagatcta-gttt 26492333  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttgatgtcc 212  Q
    ||||||||||| |||||||||| ||||||||||| |||| |||||    
T  26492334 tttttctttgtgatttcatcatctaagtgtggtggtttgttgtcc 26492378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 42311150 - 42311280
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||||| ||| ||||||||||||||||||     
T  42311150 aggggtggttttgggtcaattcttgacctgaaatcatccctcttcatcattttctctctatttcaatctaaataagtgatattcacatagatctaggtt- 42311248  T
Q  168 tttttctttgtaatttcatcatgtaagtgtgg 199  Q
    ||||||||||| |||||||||| |||||||||    
T  42311249 tttttctttgtgatttcatcatttaagtgtgg 42311280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 48207790 - 48207908
Alignment:
Q  86 attcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttca 185  Q
    |||||||||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||||||||||||||| ||  ||||||||||| ||||||    
T  48207790 attcttgacctgaaatcacccctcttcatctttttctcaatatttcaatctaaataagtgattttcacatagatctatgt--tttttctttgtgatttca 48207887  T
Q  186 tcatgtaagtgtggtgatttg 206  Q
    |||| ||||||||||||||||    
T  48207888 tcatctaagtgtggtgatttg 48207908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 83 - 215
Target Start/End: Original strand, 26583599 - 26583730
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatt 182  Q
    ||||||||||||||||||||| | |||||||||||||| ||| |||||||||||||||||| |||||||| ||| ||||||||| ||||||||||| |||    
T  26583599 tcaattcttgacctgaaatcacccctcttcatctttttatctctatttcaatctaaataagtgattttcatatatatctaggtt-tttttctttgtgatt 26583697  T
Q  183 tcatcatgtaagtgtggtgatttgatgtccatc 215  Q
    ||||||| ||||||||||| |||| ||| ||||    
T  26583698 tcatcatctaagtgtggtggtttgttgttcatc 26583730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 22928068 - 22927940
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||||||||||||| | || ||||||||||||||| |||||||||||||||||| || ||||||| ||||||| ||| |||||||||    
T  22928068 tttgggtcaattcttgacctgaaatcaccccttttcatctttttctctctatttcaatctaaataagtgactttcacacagatcta-gttttttttcttt 22927970  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  22927969 gtgatttcatcatctaagtgtggtggtttg 22927940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 21266262 - 21266397
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||| ||||| |||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       
T  21266262 aggggtggttttgggtcaattattgacatgaaatcacctctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagg--- 21266358  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
     |||||||| | |||||||||| ||||||||||| ||||    
T  21266359 gttttctttttgatttcatcatctaagtgtggtggtttg 21266397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 35667438 - 35667302
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  |||||||||||||||||| | |||||| |  ||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||      
T  35667438 aggggtggttttggatcaattcttgacttaaaatcacccttcttcatatttttctctctatttcaatctaaataagtgattttcacatagatctaggt-- 35667341  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||| | |||||||||| ||||||||||| ||||    
T  35667340 tttttctttttgatttcatcatctaagtgtggtggtttg 35667302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 42408251 - 42408369
Alignment:
Q  87 ttcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcat 186  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||||||||||  | ||||||||| |||||||||| ||||||||||| |||||||    
T  42408251 ttcttgacctgaaatcatccatcttcatctttttctctttatttcaatctaaataattgtttttcacatggatctaggtt-tttttctttgtgatttcat 42408349  T
Q  187 catgtaagtgtggtgatttg 206  Q
    ||| ||||||||||| ||||    
T  42408350 catttaagtgtggtggtttg 42408369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 433890 - 433769
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||| |||||||||||||| | || ||||||||||||||| |||||||||||||||||  || |||||||||||||||| || |||||||||    
T  433890 tttgggtcaatttttgacctgaaatcatcccttttcatctttttctctctatttcaatctaaataaatgactttcacatagatctagatt-tttttcttt 433792  T
Q  177 gtaatttcatcatgtaagtgtgg 199  Q
    || |||||||||| |||||||||    
T  433791 gtgatttcatcatctaagtgtgg 433769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 1485446 - 1485327
Alignment:
Q  85 aattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttc 184  Q
    |||||||||||| |||||| |  ||||||||||||||||| |||||||||||||||||| || |||||||||||||||| |  ||||||||||| |||||    
T  1485446 aattcttgacctaaaatcacccgtcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctagat--tttttctttgtgatttc 1485349  T
Q  185 atcatgtaagtgtggtgatttg 206  Q
    ||||| ||||||||||| ||||    
T  1485348 atcatctaagtgtggtggtttg 1485327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 200
Target Start/End: Complemental strand, 1449036 - 1448906
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| ||||||||||||||||||| | ||  |||||||| ||||||| |||||||||||||||||| ||||||||||||||||||| |      
T  1449036 aggggtggttttgggtcaattcttgacctgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattttcacatagatctagat-- 1448939  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggt 200  Q
    ||||| ||||| |||||||||| ||||||||||    
T  1448938 tttttatttgtgatttcatcatctaagtgtggt 1448906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 77 - 189
Target Start/End: Original strand, 20116462 - 20116572
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| |||||| |||||||||||||| |  ||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||  |||||||||    
T  20116462 tttgggtcaatttttgacctgaaatcacccttcttcatctttttctatctatttcaatctaaataagtgattttcacatagatctaggt--tttttcttt 20116559  T
Q  177 gtaatttcatcat 189  Q
    || ||||||||||    
T  20116560 gtgatttcatcat 20116572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 198
Target Start/End: Complemental strand, 42067265 - 42067139
Alignment:
Q  70 gggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatt 169  Q
    |||||| ||||| ||||||||||||||||||||| | ||||||||||| || ||| |||||||||||||||||| ||||||||||||||| ||| |  ||    
T  42067265 gggtgattttgggtcaattcttgacctgaaatcacctctcttcatcttgttatctatatttcaatctaaataagtgattttcacatagatatagat--tt 42067168  T
Q  170 tttctttgtaatttcatcatgtaagtgtg 198  Q
    ||||||| | |||||||||| ||||||||    
T  42067167 tttctttctgatttcatcatctaagtgtg 42067139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 45199238 - 45199102
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  |||||||||| | |||||||||||||| |  ||||||||||||||||| ||||| ||| |||||||| |||||||| ||||||||| ||      
T  45199238 aggggtggttttggatcaactattgacctgaaatcacccatcttcatctttttctctatattttaatttaaataagtgattttcatatagatctaagt-- 45199141  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||||||| ||||||||||| ||||    
T  45199140 tttttctttgtgatttcatcatctaagtgtggtggtttg 45199102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 183
Target Start/End: Original strand, 32684555 - 32684671
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||||||||||||||||||    |||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||     
T  32684555 aggggtggttttgggtcaattcttgacctgaaatcacatgtcttcatcgttttctctctatttcaatctaaataagtgattttcacatagatctaggttt 32684654  T
Q  168 tt-tttctttgtaattt 183  Q
    || ||||||||| ||||    
T  32684655 ttctttctttgtgattt 32684671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 23085399 - 23085528
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacac-tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctt 175  Q
    ||||| |||||| ||||| |||||||| | | ||||||||||||||| | |||||||||||||||||  || ||||||||||||||||||| ||||||||    
T  23085399 tttgggtcaattattgacttgaaatcaccccctcttcatctttttctttctatttcaatctaaataattgactttcacatagatctaggtt-tttttctt 23085497  T
Q  176 tgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||| |||| ||||| ||||||||||| ||||    
T  23085498 tgtgattttatcatctaagtgtggtggtttg 23085528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 67 - 166
Target Start/End: Original strand, 6001890 - 6001990
Alignment:
Q  67 aaggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataaggga-ttttcacatagatctaggt 165  Q
    ||||||||| |||||||||||| |||||||||||||| |  ||||||||||||||||  ||||| |||||||||||| || ||||||||||||| |||||    
T  6001890 aaggggtgattttggatcaatttttgacctgaaatcacccatcttcatctttttctccctattttaatctaaataagtgatttttcacatagatttaggt 6001989  T
Q  166 t 166  Q
    |    
T  6001990 t 6001990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 14628047 - 14627949
Alignment:
Q  107 ctcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||||||| ||| || ||||||||||||||| |||||||||||| || |||||| |||||| |||| |||||||||| ||||||||||| ||||    
T  14628047 ctcttcatctttttttctctaattcaatctaaataagtgattttcacataaatataggtt-tttttccttgtgatttcatcatctaagtgtggtggtttg 14627949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 31235995 - 31235900
Alignment:
Q  72 gtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataaggga-ttttcacatagatctaggtt 166  Q
    |||| ||||| |||||| ||||| |||||||  | |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||    
T  31235995 gtgattttgggtcaatttttgacatgaaatctcccctcttcatctttttctctctatttcaatctaaataagtgatttttcacatagatctaggtt 31235900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 17223136 - 17223060
Alignment:
Q  137 aaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttgatgtccatc 215  Q
    ||||||| ||||||||||||||||||||||  |||||||||| |||||||||| |||||||||||||||| ||| ||||    
T  17223136 aaataagtgattttcacatagatctaggtt--ttttctttgtgatttcatcatctaagtgtggtgatttgttgttcatc 17223060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 34773657 - 34773718
Alignment:
Q  145 gattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||| ||||||||||| ||| |||||||||||||||| ||||| ||||||||||||||||    
T  34773657 gatttttacatagatctaagttttttttctttgtaatttgatcatctaagtgtggtgatttg 34773718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 3860861 - 3860920
Alignment:
Q  107 ctcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtt 166  Q
    ||||| |||||||||||||| ||||||| |||||||| ||||||||||||||||| ||||    
T  3860861 ctctttatctttttctctttgtttcaatataaataagtgattttcacatagatcttggtt 3860920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 6558817 - 6558884
Alignment:
Q  139 ataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||| ||||||||||||||| |||||| || |||||||| |||||||||| ||||||||||| ||||    
T  6558817 ataagtgattttcacatagatttaggtttttcttctttgtgatttcatcatctaagtgtggtggtttg 6558884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 36143776 - 36143834
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtt 166  Q
    ||||||||||||||||| || ||||||||||||||| | ||||||| ||||||||||||    
T  36143776 tcttcatctttttctctctaattcaatctaaataagtgtttttcacgtagatctaggtt 36143834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 1575243 - 1575165
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatc 187  Q
    |||||||||||||||| |||||||||| || |||||  ||| || ||||||||||  |||||||||||||| ||||||||    
T  1575243 tcttcatctttttctccttatttcaatttacataagttattgtcgcatagatcta-attatttttctttgtgatttcatc 1575165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 20083238 - 20083289
Alignment:
Q  105 cactcttcatctttttctctttatttcaatctaaataagggattttcacata 156  Q
    |||||||||||||||||| | ||||||||||||||||||  |||||||||||    
T  20083238 cactcttcatctttttctttctatttcaatctaaataagcaattttcacata 20083289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 200
Target Start/End: Original strand, 35261183 - 35261300
Alignment:
Q  84 caattcttgacctgaaatcaacactcttcatctttttctcttt-atttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatt 182  Q
    ||||| ||||||| |||||| |  |||||||||||||||  |  ||||||||| ||||||| |||||||||||| || ||| || |||||||| || |||    
T  35261183 caatttttgacctaaaatcacccatcttcatctttttctagtccatttcaatccaaataagtgattttcacataaatttagattttttttcttcgtgatt 35261282  T
Q  183 tcatcatgtaagtgtggt 200  Q
    || ||||  |||||||||    
T  35261283 tcgtcatccaagtgtggt 35261300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 5546277 - 5546317
Alignment:
Q  116 tttttctctttatttcaatctaaataagggattttcacata 156  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  5546277 tttttctctctatttcaatctaaataagtgattttcacata 5546317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 7640928 - 7640885
Alignment:
Q  129 ttcaatctaaataagggattttcacatagatctaggttattttt 172  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||    
T  7640928 ttcaatctaaataagtgattttcacatagatataggtttttttt 7640885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 55
Target Start/End: Original strand, 25175499 - 25175530
Alignment:
Q  24 atatgcttaccctatcactcaccattattgaa 55  Q
    ||||||||||||||||||||||||||||||||    
T  25175499 atatgcttaccctatcactcaccattattgaa 25175530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 32522116 - 32522042
Alignment:
Q  90 ttgacctgaaatcaacactcttcatcttttt-----ctctttatttcaatctaaataagggattttcacatagat 159  Q
    |||||||||||||| |  |||||||||||||     |||| ||||||||| |||||||| |||||||||||||||    
T  32522116 ttgacctgaaatcacccatcttcatcttttttttctctctctatttcaatttaaataagtgattttcacatagat 32522042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 1749388 - 1749300
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatcttttt-ctctttatttcaatctaaataagggattttcacata 156  Q
    |||||||| ||| | |||||| |||||||  ||||| | | |||||||||||| | |||| |||||||||||||||| ||||||||||||    
T  1749388 aggggtgattttaggtcaatttttgacctagaatcacc-cgcttcatcttttttccctttctttcaatctaaataagtgattttcacata 1749300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 17499799 - 17499738
Alignment:
Q  134 tctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgt 197  Q
    ||||||||||  ||||||||| ||||||||||  |||||| |||| |||||||||| |||||||    
T  17499799 tctaaataagttattttcacaaagatctaggt--tttttcattgtgatttcatcatctaagtgt 17499738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 17553415 - 17553476
Alignment:
Q  134 tctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgt 197  Q
    ||||||||||  ||||||||| ||||||||||  |||||| |||| |||||||||| |||||||    
T  17553415 tctaaataagttattttcacaaagatctaggt--tttttcattgtgatttcatcatctaagtgt 17553476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 24351040 - 24351000
Alignment:
Q  116 tttttctctttatttcaatctaaataagggattttcacata 156  Q
    |||||| |||| |||||||||||||||| ||||||||||||    
T  24351040 tttttccctttctttcaatctaaataagtgattttcacata 24351000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 5e-49; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 30371597 - 30371735
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||  |||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  30371597 aggggtggttttgggtcaatatttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttt 30371696  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  30371697 tttttctttgtaatttcatcatctaagtgtggtgatttg 30371735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 27267058 - 27266929
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||||||||||||| | |||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  27267058 tttgggtcaattcttgacctgaaatcacccctcttcatatttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttttcttt 27266959  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||| ||||    
T  27266958 gtgatttcatcatctaagtgtggtggtttg 27266929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 18677673 - 18677535
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||| |||| ||||||||| | |||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||     
T  18677673 aggggtggttttgggtcaattattgatctgaaatcatccctcttcatctttttctctctattttaatctaaataagtgattttcacatagatctaggttt 18677574  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||||||| ||||||||||| ||||    
T  18677573 tttttctttgtgatttcatcatctaagtgtggtggtttg 18677535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 7246840 - 7246968
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||| |||||||| || | |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||| |||||||||    
T  7246840 tttgggtcaattcttaacctgaaaccacccctcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggtt-tttttcttt 7246938  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||||||||||||||    
T  7246939 gtgatttcatcatctaagtgtggtgatttg 7246968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 10649326 - 10649434
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||| ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  10649326 aggggtgattttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggtt- 10649424  T
Q  168 tttttctttg 177  Q
    ||||||||||    
T  10649425 tttttctttg 10649434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 86 - 206
Target Start/End: Complemental strand, 2058027 - 2057908
Alignment:
Q  86 attcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttca 185  Q
    ||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| | ||||||    
T  2058027 attcttgacctaaaatcacccctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggtt-tttttctttatgatttca 2057929  T
Q  186 tcatgtaagtgtggtgatttg 206  Q
    |||| ||||||||||| ||||    
T  2057928 tcatctaagtgtggtggtttg 2057908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 83 - 206
Target Start/End: Original strand, 26578137 - 26578261
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg-ttatttttctttgtaat 181  Q
    |||||||||||||||||||||    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||    
T  26578137 tcaattcttgacctgaaatcactcatcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggtttttttttctttgtaat 26578236  T
Q  182 ttcatcatgtaagtgtggtgatttg 206  Q
    |||||||| ||| ||| ||||||||    
T  26578237 ttcatcatctaaatgtagtgatttg 26578261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 7241664 - 7241792
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||| |||||||| || | |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||| |||||||||    
T  7241664 tttgggtcaattcttaacctgaaaccacccctcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggtt-tttttcttt 7241762  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||| ||||||||||||    
T  7241763 gtgatttcatcatctaattgtggtgatttg 7241792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 21060479 - 21060352
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||  ||||||||     
T  21060479 tttgggtcaattcttgatctgaaatcaccactcttcatctttttctctatatttcaatctaaataagtgattttcacatagatgtaggt--tttttcttc 21060382  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || || ||||||| ||||||||||| ||||    
T  21060381 gtgatgtcatcatctaagtgtggtggtttg 21060352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 7150533 - 7150405
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||||| |||| |||||||||||||| | |||||||||||||||||| |||||||||||||||||| || ||||||||||||||| ||| |||||||||    
T  7150533 tttggattaatttttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaagtt-tttttcttt 7150435  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||  ||||||||| ||||||||||| ||||    
T  7150434 gtgctttcatcatctaagtgtggtggtttg 7150405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 781271 - 781398
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||||||||||||| |  ||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||   |||||||||    
T  781271 tttggttcaattcttgacctgaaatcacccatcttcatctttttctctatatttcaatctaaataagtgattttcagatagatctagg--gtttttcttt 781368  T
Q  177 gtaatttcatcatgtaagtgtggtgatttg 206  Q
    || |||||||||| ||||| ||||| ||||    
T  781369 gtgatttcatcatctaagtatggtggtttg 781398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 206
Target Start/End: Original strand, 16981173 - 16981299
Alignment:
Q  78 ttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttg 177  Q
    ||||||||||||||||||||||||||   |||||||| ||||||||| |||||||||||||||||| ||||| |||||| ||||||||  ||||||||||    
T  16981173 ttggatcaattcttgacctgaaatcactcctcttcatatttttctctctatttcaatctaaataagtgatttacacatatatctaggt--tttttctttg 16981270  T
Q  178 taatttcatcatgtaagtgtggtgatttg 206  Q
    | |||||||||| |||||| |||| ||||    
T  16981271 tgatttcatcatctaagtgcggtggtttg 16981299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 35475543 - 35475407
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||| ||||| | ||||||||| ||||||||| | ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||||| |      
T  35475543 aggggtgattttgggttaattcttgatctgaaatcacctctcttcatcttgttatctatatttcaatctaaataagtgattttcacatagatctagat-- 35475446  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||||||| || |||||||| ||||    
T  35475445 tttttctttgtgatttcatcatttacgtgtggtggtttg 35475407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 28235458 - 28235599
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| |||||  |||||||||||||| | |||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||| |      
T  28235458 aggggtggttttgggtcaatcattgacctgaaatcacccctcttcatctttttctttctatttcgatctaaataagtgattttcacatagatctagat-- 28235555  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttgatgtc 211  Q
    ||||||||||| |||||||||| |||||||| || |||| ||||    
T  28235556 tttttctttgtgatttcatcatctaagtgtgatggtttgttgtc 28235599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 206
Target Start/End: Complemental strand, 43262009 - 43261889
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatt 182  Q
    ||||||||| ||||||||||| |  ||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||   |||| |||||| |||    
T  43262009 tcaattcttaacctgaaatcacccatcttcatctttttatctctatttcaatctaaataagtgattttcacatagatctagg---ttttcctttgtgatt 43261913  T
Q  183 tcatcatgtaagtgtggtgatttg 206  Q
    | ||||| ||||||||||| ||||    
T  43261912 ttatcatctaagtgtggtggtttg 43261889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 83 - 206
Target Start/End: Original strand, 34881598 - 34881727
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctag-------gttatttttctt 175  Q
    ||||||||||||||||||||| | ||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||        || ||||||||    
T  34881598 tcaattcttgacctgaaatcacctctcttcatctttt-ctctctatttcaatctaaataagtgattttcacatagatctagtttttttcttttttttctt 34881696  T
Q  176 tgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||| |||||||||| ||||||||||| ||||    
T  34881697 tgtgatttcatcatctaagtgtggtggtttg 34881727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 7887144 - 7887008
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| || |||||||||||||||||| | |||||| |||||| |||| ||||| |||||||||||| |||||||||||| ||||| ||      
T  7887144 aggggtggttttgggtccattcttgacctgaaatcatccctcttcgtcttttcctctctattttaatctaaataagtgattttcacataaatctatgt-- 7887047  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||| | |||||||||| ||||||||||| ||||    
T  7887046 tttttctttttgatttcatcatctaagtgtggtggtttg 7887008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 206
Target Start/End: Complemental strand, 19260022 - 19259881
Alignment:
Q  63 cgttaaggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggatttt-cacatagatct 161  Q
    |||| |||||||  ||||| ||||||||||||||||||||| | |  |||   ||||||||| |||||||||||||||||| |||||| |||||||||||    
T  19260022 cgttgaggggtggttttgggtcaattcttgacctgaaatcaccccaattc---tttttctctctatttcaatctaaataagtgatttttcacatagatct 19259926  T
Q  162 aggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    | ||| ||||||| ||| |||||||||| ||||||||||| ||||    
T  19259925 aagttttttttctctgtgatttcatcatctaagtgtggtggtttg 19259881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 19281134 - 19281015
Alignment:
Q  85 aattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttc 184  Q
    |||| |||||| ||||||| |  ||||||||||||||||| |||||||||||||||||| || ||||||| | ||||||||  ||||||||||| |||||    
T  19281134 aatttttgaccggaaatcacccatcttcatctttttctctctatttcaatctaaataagtgactttcacacatatctaggt--tttttctttgtgatttc 19281037  T
Q  185 atcatgtaagtgtggtgatttg 206  Q
    ||||| ||||||||||| ||||    
T  19281036 atcatctaagtgtggtggtttg 19281015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 86 - 206
Target Start/End: Complemental strand, 36344678 - 36344561
Alignment:
Q  86 attcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttca 185  Q
    ||||||||||| |||||| | |||||||||||||||||| ||||||||||||||||||  |||||||||| |||||| ||  ||||||||||| |||| |    
T  36344678 attcttgacctaaaatcacccctcttcatctttttctctatatttcaatctaaataagttattttcacatggatctaagt--tttttctttgtgattt-a 36344582  T
Q  186 tcatgtaagtgtggtgatttg 206  Q
    |||| ||||||||||| ||||    
T  36344581 tcatctaagtgtggtggtttg 36344561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 30298130 - 30298217
Alignment:
Q  117 ttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||  ||||||||| | |||||||||| ||||||||||| ||||    
T  30298130 ttttctctatatttcaatctaaataagtgattttcacatagatctaggt--tttttctttatgatttcatcatctaagtgtggtggtttg 30298217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 20257886 - 20257798
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttt 171  Q
    |||||| |||||||||||||| |  ||| | ||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||    
T  20257886 tcaatttttgacctgaaatcatccatctacttctttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttt 20257798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 27751857 - 27751935
Alignment:
Q  126 tatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||| |||||||| |||||||||||||||||||||  ||||||||||| |||||||||| ||||||||||| ||||    
T  27751857 tatttcaatataaataagtgattttcacatagatctaggt--tttttctttgtgatttcatcatctaagtgtggtggtttg 27751935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 42579750 - 42579897
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatcttttt---ctctttatttcaatctaaataagggattttcacatagatctagg 164  Q
    |||||||  ||||| |||||| ||||| |||||||| | || ||||| |||||   || | |||||||||||||||||| ||||||||||||||| ||||    
T  42579750 aggggtggttttgggtcaattattgacatgaaatcaccccttttcattttttttttctttctatttcaatctaaataagtgattttcacatagatttagg 42579849  T
Q  165 tt------atttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||       ||||||||||| |||||||||| ||||||||||||||||    
T  42579850 tttttttgttttttctttgtgatttcatcatctaagtgtggtgatttg 42579897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 206
Target Start/End: Complemental strand, 3271612 - 3271472
Alignment:
Q  70 gggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtt--- 166  Q
    |||||| ||| | |||||||||||| ||||||||   ||||||||||||| |||| | |||||||||||||||| ||||||||||||| ||||  ||       
T  3271612 gggtgattttaggtcaattcttgacatgaaatcactcctcttcatctttt-ctctctgtttcaatctaaataagtgattttcacataggtctaatttttt 3271514  T
Q  167 --atttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
       ||||||||||| |||||||||| ||||||||||| ||||    
T  3271513 tgttttttctttgtgatttcatcatctaagtgtggtggtttg 3271472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 184
Target Start/End: Original strand, 15570779 - 15570897
Alignment:
Q  65 ttaaggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataaggga-ttttcacatagatctag 163  Q
    ||||||||||||||||  ||| || ||||| |||||||| | |||||||||||||||||| || |||||||||||||   || ||||||||||||| |||    
T  15570779 ttaaggggtgactttgagtcagtttttgacttgaaatcatccctcttcatctttttctctataattcaatctaaatatttgatttttcacatagatgtag 15570878  T
Q  164 gttatttttctttgtaatttc 184  Q
    ||  ||||||||||| |||||    
T  15570879 gt--tttttctttgtgatttc 15570897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 41184651 - 41184510
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtt- 166  Q
    |||| ||| ||||| |||||| ||||| |||||||| || |||||||| |||||||| ||||||||||||||||    |||||||||||||||||||||     
T  41184651 agggatgattttgggtcaatttttgacatgaaatcaccattcttcatc-ttttctctctatttcaatctaaata----attttcacatagatctaggttt 41184557  T
Q  167 -------atttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
            ||||||||||| |||||||||| ||||||||||| ||||    
T  41184556 ttttttgttttttctttgtgatttcatcatctaagtgtggtggtttg 41184510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 43148645 - 43148740
Alignment:
Q  110 ttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    |||||| |||||||| |||||| ||||||||||| || ||||||||| || ||| || ||||||||||| |||||||||| ||||||||||| ||||    
T  43148645 ttcatccttttctctctatttcgatctaaataagtgactttcacatatatttagatt-tttttctttgtgatttcatcatctaagtgtggtggtttg 43148740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 201
Target Start/End: Complemental strand, 27576516 - 27576425
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtg 201  Q
    |||||||| |||||||| ||||||||| |||||||| ||| ||||||||||||||| |  ||||||||||| ||||| |||| | |||||||||    
T  27576516 tcttcatccttttctctctatttcaatgtaaataagtgatattcacatagatctagat--tttttctttgtgatttcgtcatatgagtgtggtg 27576425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 11767695 - 11767762
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggatttt 150  Q
    |||||| ||||||| |||||| |  ||||||||||||||||| |||||||||||||||||| ||||||    
T  11767695 tcaatttttgacctaaaatcatctgtcttcatctttttctctatatttcaatctaaataagtgatttt 11767762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 201
Target Start/End: Original strand, 42886392 - 42886482
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtggtg 201  Q
    |||||||| |||||||| |||||||||| ||||||| | ||||||||||||| ||||   |||||||| || |||||||||| | |||||||||    
T  42886392 tcttcatccttttctctctatttcaatcaaaataagtgcttttcacatagatttagg---tttttcttcgtgatttcatcatctgagtgtggtg 42886482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 14211076 - 14211162
Alignment:
Q  70 gggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacata 156  Q
    |||||| ||| | |||||| |||||||  ||||| | |||| |||||||||| |||| |||||||||||||||| ||||||||||||    
T  14211076 gggtgattttaggtcaatttttgacctagaatcacccctctgcatctttttccctttctttcaatctaaataagtgattttcacata 14211162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 10148698 - 10148766
Alignment:
Q  95 ctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctag 163  Q
    ||||||||||| |||||||| |||||||    |||| |||||||||||| |||||||||||||||||||    
T  10148698 ctgaaatcaaccctcttcatatttttcttcccattttaatctaaataagtgattttcacatagatctag 10148766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 2979559 - 2979469
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatcttttt--ctctttatttcaatctaaataagggattttcacata 156  Q
    |||||||| ||| | |||||| |||||||  ||||| | |||| |||||||||  |||||| |||||||||||||||| ||||||||||||    
T  2979559 aggggtgattttaggtcaatttttgacctataatcacccctctgcatcttttttcctctttctttcaatctaaataagtgattttcacata 2979469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 3166272 - 3166363
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtgg 199  Q
    ||||||||||||| ||||||||| ||| ||||||||  |||||||||||||  || ||| |||| |||||| |||||  ||| |||||||||    
T  3166272 tcttcatctttttatctttatttaaatataaataagcaattttcacatagacttaagtttttttactttgtgatttcggcatttaagtgtgg 3166363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 31802625 - 31802574
Alignment:
Q  124 tttatttcaatctaaataagggattttcacatagatctaggttatttttctt 175  Q
    |||||||||||||||||||||||||||||| ||||||||  || ||||||||    
T  31802625 tttatttcaatctaaataagggattttcacgtagatctaacttttttttctt 31802574  T

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Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 1697015 - 1696979
Alignment:
Q  126 tatttcaatctaaataagggattttcacatagatcta 162  Q
    |||||||||||||||||| ||||||||||||||||||    
T  1697015 tatttcaatctaaataagtgattttcacatagatcta 1696979  T

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Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 8088459 - 8088371
Alignment:
Q  67 aaggggtgactttggatcaattcttgacctgaaatcaacactcttcatcttttt-ctctttatttcaatctaaataagggattttcaca 154  Q
    ||||||||| ||| ||||| |  |||||||||| ||| | |||| ||||||||| |||||| |||| ||||||||||| ||||||||||    
T  8088459 aaggggtgattttagatcattctttgacctgaagtcacctctctgcatcttttttctctttctttcgatctaaataagtgattttcaca 8088371  T

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Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 171
Target Start/End: Original strand, 28097041 - 28097128
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttt 171  Q
    |||||| |||||||||| ||| |  |||||||||||| | ||  |||||||| |||||||| |||||||||||| || |||||||||||    
T  28097041 tcaatttttgacctgaattcacccatcttcatctttt-cgctcaatttcaatataaataagtgattttcacataaatttaggttatttt 28097128  T

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Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 1582288 - 1582233
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctag 163  Q
    ||||||| |||||||||  |||| |||||||||||| ||||||||| |||||||||    
T  1582288 tcttcatatttttctctccattttaatctaaataagtgattttcacgtagatctag 1582233  T

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Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 1602527 - 1602582
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctag 163  Q
    ||||||| |||||||||  |||| |||||||||||| ||||||||| |||||||||    
T  1602527 tcttcatatttttctctccattttaatctaaataagtgattttcacgtagatctag 1602582  T

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Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 7613220 - 7613165
Alignment:
Q  111 tcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtt 166  Q
    ||||| |||||||| | |||||||||||||||| | |||||| |||||||||||||    
T  7613220 tcatccttttctctctgtttcaatctaaataagtgtttttcatatagatctaggtt 7613165  T

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Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 8514883 - 8514796
Alignment:
Q  69 ggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacata 156  Q
    |||||| ||||||||||||| |  | ||||||||| |  || |||||||||||||||||||| |||| ||||||   |||||||||||    
T  8514883 ggggtggctttggatcaattttaaatctgaaatcatccttcatcatctttttctctttattttaatcaaaataaattattttcacata 8514796  T

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Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 42432803 - 42432887
Alignment:
Q  98 aaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttc 184  Q
    |||||| | ||||| || ||||||||| |||||||||||||| ||| || ||||| |||||| |||||  ||||||||||| |||||    
T  42432803 aaatcacctctctttatatttttctctctatttcaatctaaaaaagtgaatttcatatagatttaggt--tttttctttgtgatttc 42432887  T

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Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 6445849 - 6445907
Alignment:
Q  108 tcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtt 166  Q
    |||||||| |||||||| ||| | ||| |||||||| |||||| |||||||||||||||    
T  6445849 tcttcatcgttttctctctatcttaatttaaataagtgatttttacatagatctaggtt 6445907  T

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Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 17682903 - 17682831
Alignment:
Q  90 ttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctag 163  Q
    |||||| ||||||| | |||||||||||| |||| |  ||| |||||||||||  |||||||||||||||||||    
T  17682903 ttgacccgaaatcacccctcttcatctttatctcatcgttt-aatctaaataaacgattttcacatagatctag 17682831  T

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Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 187
Target Start/End: Complemental strand, 42432255 - 42432169
Alignment:
Q  97 gaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatc 187  Q
    ||||||| | |||||||| ||||||||| | |||||||  ||| ||| |||||  | |||||||||||||  |||||||||||||||||||    
T  42432255 gaaatcacctctcttcatatttttctctctttttcaattaaaaaaagtgattt--atatagatctaggtt--ttttctttgtaatttcatc 42432169  T

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Target: scaffold0311 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 8590 - 8726
Alignment:
Q  68 aggggtgactttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggtta 167  Q
    |||||||  ||||| | ||||||| || |||||||| | || ||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||      
T  8590 aggggtggttttgggttaattcttaacttgaaatcaccccttttcatctttttatctctatttcaatctaaataagtgattttcacatagatctaggt-- 8687  T
Q  168 tttttctttgtaatttcatcatgtaagtgtggtgatttg 206  Q
    ||||||||||| |||||||||| ||||||||||| ||||    
T  8688 tttttctttgtgatttcatcatctaagtgtggtggtttg 8726  T

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Target: scaffold0146 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 206
Target Start/End: Complemental strand, 16514 - 16390
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctagg-ttatttttctttgtaat 181  Q
    |||||||||||||| ||||||    ||||||||| ||||||| |||||||||||||||||| ||||||||||||||| |||| || ||||||||||| ||    
T  16514 tcaattcttgacctaaaatcattcatcttcatctgtttctctctatttcaatctaaataagtgattttcacatagatttaggtttttttttctttgtgat 16415  T
Q  182 ttcatcatgtaagtgtggtgatttg 206  Q
    |||||||| ||||||||||| ||||    
T  16414 ttcatcatctaagtgtggtggtttg 16390  T

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Target: scaffold0495 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 5277 - 5397
Alignment:
Q  77 tttggatcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttcttt 176  Q
    ||||| ||||||||||||||||||||| | |||||||||||| ||||| || ||||||||||||||| || ||| ||||| ||||| ||| |||||||||    
T  5277 tttgggtcaattcttgacctgaaatcacccctcttcatctttctctctctacttcaatctaaataagtgacttttacatatatctatgtt-tttttcttt 5375  T
Q  177 gtaatttcatcatgtaagtgtg 198  Q
    || |||||||||| ||||||||    
T  5376 gtgatttcatcatttaagtgtg 5397  T

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Target: scaffold0014 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 201534 - 201450
Alignment:
Q  112 catctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatttcatcatgtaagtgtg 198  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||| |  ||||||||||| |||||||||| ||||||||    
T  201534 catctttttctctatatttcaatctaaataagtgattttcacatagatctagat--tttttctttgtgatttcatcatctaagtgtg 201450  T

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Target: scaffold0003 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 206
Target Start/End: Complemental strand, 361986 - 361869
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacatagatctaggttatttttctttgtaatt 182  Q
    ||||||||||||||||||||| | |||| ||||||||||||  ||||||||||||||||||  |||||||||||||  ||||    |||| ||||| |||    
T  361986 tcaattcttgacctgaaatcacccctctccatctttttctc--tatttcaatctaaataagtaattttcacatagagttagg----ttttttttgtgatt 361893  T
Q  183 tcatcatgtaagtgtggtgatttg 206  Q
    ||||||| ||||| ||||| ||||    
T  361892 tcatcatttaagtatggtggtttg 361869  T

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Target: scaffold0426 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 6223 - 6295
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatctttttctctttatttcaatctaaataagggattttcacat 155  Q
    |||||||||||||| |||||| | |||||||||||||| ||| |||| ||||||||||||| |||||||||||    
T  6223 tcaattcttgacctaaaatcacccctcttcatctttttttctctattccaatctaaataagtgattttcacat 6295  T

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Target: scaffold0888 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 1906 - 1831
Alignment:
Q  83 tcaattcttgacctgaaatcaacactcttcatcttttt--ctctttatttcaatctaaataagggattttcacata 156  Q
    |||||| |||||||  ||||| | |||| |||||||||  | |||| |||||||||||||||| ||||||||||||    
T  1906 tcaatttttgacctagaatcacctctctgcatcttttttcccctttctttcaatctaaataagtgattttcacata 1831  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 453851 - 453891
Alignment:
Q  116 tttttctctttatttcaatctaaataagggattttcacata 156  Q
    ||||||||||||||| ||| |||||||| ||||||||||||    
T  453851 tttttctctttattttaatttaaataagtgattttcacata 453891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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