View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10437_2D_high_1 (Length: 722)

Name: NF10437_2D_high_1
Description: NF10437_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10437_2D_high_1
NF10437_2D_high_1
[»] chr8 (30 HSPs)
chr8 (1-624)||(4876061-4876684)
chr8 (9-605)||(4925962-4926546)
chr8 (4-185)||(10445958-10446139)
chr8 (1-183)||(4714045-4714227)
chr8 (1-163)||(21440282-21440444)
chr8 (3-163)||(4702729-4702889)
chr8 (1-328)||(4688071-4688395)
chr8 (1-183)||(4995506-4995688)
chr8 (1-160)||(4777270-4777429)
chr8 (1-163)||(4680599-4680761)
chr8 (9-160)||(4725500-4725651)
chr8 (3-104)||(4745027-4745128)
chr8 (1-163)||(4914225-4914387)
chr8 (1-264)||(4891071-4891331)
chr8 (4-163)||(4735969-4736128)
chr8 (423-594)||(10445377-10445547)
chr8 (436-538)||(4777665-4777767)
chr8 (436-579)||(4680191-4680342)
chr8 (423-540)||(4713705-4713821)
chr8 (1-104)||(4905110-4905213)
chr8 (423-556)||(4725135-4725270)
chr8 (437-563)||(4687842-4687968)
chr8 (423-527)||(4744634-4744740)
chr8 (437-540)||(4702370-4702473)
chr8 (436-482)||(21440707-21440753)
chr8 (423-479)||(4735680-4735735)
chr8 (437-512)||(4906199-4906274)
chr8 (436-493)||(4914678-4914735)
chr8 (293-328)||(4725335-4725370)
chr8 (295-328)||(4744811-4744844)


Alignment Details
Target: chr8 (Bit Score: 596; Significance: 0; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 596; E-Value: 0
Query Start/End: Original strand, 1 - 624
Target Start/End: Original strand, 4876061 - 4876684
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4876061 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 4876160  T
Q  101 atattcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctccttacaaaatgtagttgctgttgacgagtaatcttctct 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4876161 atattgaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctccttacaaaatgtagttgctgttgatgagtaatcttctct 4876260  T
Q  201 gcaggtgctatactcattcttacacctgttcttatgaattcagcatctgaaatgtaatttatgcttgtgatattgtcagtgtagtttgaattttcaggta 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4876261 gcaggtgctatactcattcttacacctgttcttatgaattcagcatctgaaatgtaatttatgcttgtgatattgtcactgtagtttgaattttcaggta 4876360  T
Q  301 tgccacaatctatgctaatgaatcctgacaagagatatatgtagcaacaaagaaaacttcagctataacaatattaagtagtaacaactaacaactatat 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4876361 tgccacaatctatgctaatgaatcctgacaagagatatatgtagcaacaaagaaaacttcagctataacaatattaagtagtaacaactaacaactatat 4876460  T
Q  401 gtgtgacattaagcgacattatacaaattaataacacaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaa 500  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4876461 atgtgacattaagcgacattatacaaattaataacccaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaa 4876560  T
Q  501 acaaaatgcaataagatttccatcattgtttgcttcattaggaatataattaatgaatgatgagtgttaatgctatacaacgcagcatttataccgctag 600  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4876561 acaaaatgcaaaaagatttccatcattgtttgcttcattaggaatataattaatgaatgatcagtgttaatgctatacaacgcagcatttataccgctag 4876660  T
Q  601 agagtcaaatttgcttcaatttac 624  Q
    ||||||||||||||||||||||||    
T  4876661 agagtcaaatttgcttcaatttac 4876684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 9 - 605
Target Start/End: Original strand, 4925962 - 4926546
Alignment:
Q  9 gtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaaatattcaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||||||||||||||| ||    
T  4925962 gtatcccacacattaggtccaaaatgaagatcaaattgtggtggttcatttatattatcatagtttccataaaggaaagtagctctgattaaatattgaa 4926061  T
Q  109 tatccatgtttacatttattctgtagcaatttctcactccacttggaaagctccttacaaaatgtagttgctgttgacgagtaatcttctctgcaggtgc 208  Q
     | |||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||||||||||| |||||| |||||||| ||||||||||||     
T  4926062 cacccatgtttacatttattctgtaacagtttctaactccacttggaaagctccgtacaaaatgtagttgttgttgatgagtaatcatctctgcaggtga 4926161  T
Q  209 tatactcattcttacacctgttcttatgaattcagcatctgaaatgtaatttatgcttgtgatattgtcagtgtagtttgaattttcaggtatgccacaa 308  Q
    ||||||| | |||||||||||   ||||||||| |||||||| ||||| ||||||| |||||| || ||||||||||||||||||||||||| |||||||    
T  4926162 tatactcttacttacacctgtatctatgaattctgcatctgatatgtagtttatgcctgtgatcttctcagtgtagtttgaattttcaggtaggccacaa 4926261  T
Q  309 tctatgctaatgaatcctgacaagagatatatgtagcaacaaagaaaacttcagctataacaatattaagtagtaacaactaacaactatatgtgtgaca 408  Q
    |||||||| ||||||||||| |  | |||||||||| |||||||||||  |||||||||| |||||| ||          ||||||||| || |||||||    
T  4926262 tctatgctgatgaatcctgagataatatatatgtaggaacaaagaaaatatcagctataataatatttag----------taacaactagatatgtgaca 4926351  T
Q  409 ttaagcgacattatacaaattaataacacaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaaacaaaatg 508  Q
    | |||| ||  |||||||||||||||| | |||||||||||||||||||||||||||||||  ||||||||||  ||||||||||  |||||| |||||     
T  4926352 taaagcaactatatacaaattaataac-ccaacctgattgatcctgagcttgtatcaaaac-caaatagtaagaacaccaagcaatgctaaaagaaaatt 4926449  T
Q  509 caataagatttccatcattgtttgcttcattaggaatataattaatgaatgatgagtgttaatgctatacaacgcagcatttataccgctagagagt 605  Q
    || ||| |||  ||| |||||||||||||||||| ||| |||| ||||||||||| |  |||| |||| ||| | ||||| ||||| ||||||||||    
T  4926450 cagtaacattctcattattgtttgcttcattagggatacaatttatgaatgatgaatactaatactatgcaaggaagcatatatactgctagagagt 4926546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 10446139 - 10445958
Alignment:
Q  4 tcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaaata 103  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||| | |||||||||||||    
T  10446139 tcactgtatcccacacattaggtccaaaatgaagatcaaactgtggtgtttcatttagattatcatagtttccataatagaaagaaactctgattaaata 10446040  T
Q  104 ttcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctccttacaaaatgtagttgctgttga 185  Q
    || |||| |  |  | |||||||||||||| ||||||||||||||||| ||||||||||| ||| | | |||||||||||||    
T  10446039 ttgaataccacttgtaacatttattctgtaacaatttctcactccactaggaaagctcctcacatattctagttgctgttga 10445958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 4714227 - 4714045
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||| || |||||||||||| |||||||||| || |||||||||    
T  4714227 acttcactgtatcccaaacattaggtccaaaatgaagatcaaattctggtggctcatttaaatcatcatagtttccgtaatagaaagaagatctgattaa 4714128  T
Q  101 atattcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctccttacaaaatgtagttgctgtt 183  Q
    ||||| |||| |  |  |||||||||||||||| ||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  4714127 atatttaataccacttgttacatttattctgtaacaatttctcactccacttggaaagctcctcacatattgtagttcctgtt 4714045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 21440282 - 21440444
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||    
T  21440282 acttcactgtatcccacacattagctccaaaatgaagatcaaattgtggtggttcatttagattatcatagtttccataatagaaagaagctcttattaa 21440381  T
Q  101 atattcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctcct 163  Q
    ||||| | || |  |  ||||||||||| |||| || ||||||||||||||||||||||||||    
T  21440382 atatttagtaccacttgttacatttattttgtaacagtttctcactccacttggaaagctcct 21440444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 4702889 - 4702729
Alignment:
Q  3 ttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaaat 102  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  4702889 ttcactgtatcccagacattaggtccaaaatgaagatcaaattctgggggatcatttaaatcatcatagttaccataatagaaagtagctctgattaaat 4702790  T
Q  103 attcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctcct 163  Q
    ||| | ||||  |  |||||||||||||||| ||||||||||||||| | ||||| |||||    
T  4702789 atttagtatcacttgttacatttattctgtaacaatttctcactccattaggaaaactcct 4702729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 4688395 - 4688071
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    |||| ||||||||||| |||||||  |||||||||||||||||||||||||| || |||| || |||||||||||||||||||||||  |||||||||||    
T  4688395 actttactgtatcccaaacattagcgccaaaatgaagatcaaattgtggtggctcgtttaaatcatcatagtttccataatagaaagacgctctgattaa 4688296  T
Q  101 atattcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctccttacaaaatgtagttgctgttgacgagtaatcttctct 200  Q
    ||||| | ||||  |  |||||||||||||||| ||||||||||||||||| ||||| ||||| |||   | |||||| |||| |  | |||   |||||    
T  4688295 atatttagtatcacttgttacatttattctgtaacaatttctcactccactaggaaaactcctcacatgttctagttgttgtttaacaataa---tctct 4688199  T
Q  201 gcaggtgctatactcattcttacacctgttcttatgaattcagcatctgaaatgtaatttatgcttgtgatattgtcagtgtagtttgaattttcaggta 300  Q
    | ||| | ||| ||| | ||||||||||    ||||||||  |||||||||||||||||||||| ||||    | ||||  ||| |||||  ||||| ||    
T  4688198 gtaggaggtatcctcttacttacacctgaatctatgaatttggcatctgaaatgtaatttatgcctgtgtccgtttcagaatagcttgaaagttcagata 4688099  T
Q  301 tgccacaatctatgctaatgaatcctga 328  Q
      ||||||||||||||||||||||||||    
T  4688098 gaccacaatctatgctaatgaatcctga 4688071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 4995688 - 4995506
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||| |  ||||||||||||||||| |||||||||||||  |||||||||||    
T  4995688 acttcactgtatcccaaacattaggtccaaaatgaagatcaaattctggtggcttgtttagattatcatagttaccataatagaaagatgctctgattaa 4995589  T
Q  101 atattcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctccttacaaaatgtagttgctgtt 183  Q
    ||||| | || |  |   ||||||||||||||| || ||||||| |||| ||||||||||||| ||| | |||||||||||||    
T  4995588 atatttagtaccacttgctacatttattctgtaacagtttctcattccaattggaaagctcctcacatattgtagttgctgtt 4995506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 4777270 - 4777429
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||||||| || ||||||| || ||||||||| ||||||||||||| ||||||||||||    
T  4777270 acttcacagtatcccaaacattagctccaaaatgaagatcaaattgtggagggtcatttaaatcatcatagttaccataatagaaagaagctctgattaa 4777369  T
Q  101 atattcaatatc-catgtttacatttattctgtagcaatttctcactccacttggaaagct 160  Q
    ||||| | || |  ||| |||||||||||||||| ||||||||||||||||||||||||||    
T  4777370 atatttagtaccagatg-ttacatttattctgtaacaatttctcactccacttggaaagct 4777429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4680761 - 4680599
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || ||| ||||||||||||||||||| ||||||||||||    
T  4680761 actttactgtatcccaaacattaggtccaaaatgaagatcaaattgtggtggctcatttaaatcatcgtagtttccataatagaaagaagctctgattaa 4680662  T
Q  101 atattcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctcct 163  Q
    |||||   || |  || |||||| |||| |||| |||||| |||||||||| |||||||||||    
T  4680661 atatttggtaccattggttacatctattttgtaacaatttttcactccactgggaaagctcct 4680599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 4725651 - 4725500
Alignment:
Q  9 gtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaaatattcaa 108  Q
    |||||||| ||||||| ||||||||||||||||||||||||||| |  ||||||| ||||||||| ||||||||||||| ||||||||||||||||| |     
T  4725651 gtatcccaaacattagctccaaaatgaagatcaaattgtggtggcttgtttagatcatcatagttaccataatagaaagaagctctgattaaatatttag 4725552  T
Q  109 tatccatgtttacatttattctgtagcaatttctcactccacttggaaagct 160  Q
    || |  |  ||| ||||||| |||| ||||||||||||||||||||||||||    
T  4725551 taccacttgttatatttattttgtaacaatttctcactccacttggaaagct 4725500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 4745128 - 4745027
Alignment:
Q  3 ttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaaat 102  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||    
T  4745128 ttcaccgtatcccacacattagcaccaaaatgaagatcaaattgtggtggttgatttagattatcatagtttccataatagaaagaagctctgattaaat 4745029  T
Q  103 at 104  Q
    ||    
T  4745028 at 4745027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 4914225 - 4914387
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    |||| ||||| ||||| ||||||| ||||||||| |||||||||| |||||| | ||||||||||||||||||||||||||| |||| ||||||||||||    
T  4914225 actttactgtttcccaaacattagctccaaaatgtagatcaaattctggtggttgatttagattatcatagtttccataataaaaagaagctctgattaa 4914324  T
Q  101 atattcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctcct 163  Q
    ||||| | || |  |  |||||||||||||||| || ||||| |||||||| ||||| |||||    
T  4914325 atatttagtaccacttgttacatttattctgtaacagtttctaactccactaggaaaactcct 4914387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 4891071 - 4891331
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||| |  ||||||||||||||||||||||||   |||| || |||||| ||    
T  4891071 acttcactgtatcccacacattagctccaaagtgaagatcaaattgtggtggcttgtttagattatcatagtttccataaagaaaagaagttctgataaa 4891170  T
Q  101 atattcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctccttacaaaatgtagttgctgttgacgagtaatcttctct 200  Q
    ||||| | || |  |  ||||| ||||  |||| || ||||||||||||||||||||||| || ||| | | ||||||||||    ||| || ||| |||    
T  4891171 atatttagtaccacttgttacacttatgttgtaacagtttctcactccacttggaaagcttctcacatattctagttgctgt---agagaaaacttatct 4891267  T
Q  201 gcaggtgctatactcattcttacacctgttcttatgaattcagcatctgaaatgtaatttatgc 264  Q
    | | ||||||| ||| | |||||||| ||   ||||||||  |||||||| |||||||||||||    
T  4891268 gtacgtgctatcctcttgcttacaccagtatctatgaatttggcatctgatatgtaatttatgc 4891331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 4736128 - 4735969
Alignment:
Q  4 tcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaaata 103  Q
    |||||||| ||  |||||||||||||||||||||||||||||||||||| |  | || |  ||||||| ||||||||   ||||||||||||||||||||    
T  4736128 tcactgtagccaccacattaggtccaaaatgaagatcaaattgtggtggcttgtctaaaccatcatagcttccataaagaaaagtagctctgattaaata 4736029  T
Q  104 ttcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctcct 163  Q
    || | || |  |  ||||||||||| |||| |||||||||||||||||||||||||||||    
T  4736028 tttagtaccacttgttacatttattttgtaacaatttctcactccacttggaaagctcct 4735969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 423 - 594
Target Start/End: Complemental strand, 10445547 - 10445377
Alignment:
Q  423 acaaattaataacacaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaaacaaaatgcaataagatttcca 522  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||  | |||||||| |   ||  |||||||| ||| |||  ||    
T  10445547 acaaattcataa-acaaacctgattgatcctgagcttgtatcaaaaccaaaatagtaagaacgccaagcaatatggaacgaaaatgcagtaacattctca 10445449  T
Q  523 tcattgtttgcttcattaggaatataattaatgaatgatgagtgttaatgctatacaacgcagcatttatac 594  Q
    |||||||||| ||||||||| ||| |||||  || |||| ||||||||| |||||||| | |||||||||||    
T  10445448 tcattgtttgtttcattagggatacaattatggactgataagtgttaattctatacaaggaagcatttatac 10445377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 436 - 538
Target Start/End: Original strand, 4777665 - 4777767
Alignment:
Q  436 acaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaaacaaaatgcaataagatttccatcattgtttgctt 535  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||| |||||||| ||| |||  ||| |||||||||||    
T  4777665 acaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagaccaccaagcaatgctaaaagaaaatgcagtaacattctcattattgtttgctt 4777764  T
Q  536 cat 538  Q
    |||    
T  4777765 cat 4777767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 436 - 579
Target Start/End: Complemental strand, 4680342 - 4680191
Alignment:
Q  436 acaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaaacaaaatgcaa------taagatttccatcattgt 529  Q
    ||||||||||||||||||||||||||| |||||| ||| |||||||| |||||| ||| ||| ||| |||||||||      ||| ||| | |||| | |    
T  4680342 acaaacctgattgatcctgagcttgtaccaaaaccaaagtagtaaggacaccaaacaatactgaaagaaaatgcaaaggcagtaacattcctatcaattt 4680243  T
Q  530 ttgcttcattaggaatat--aattaatgaatgatgagtgttaatgctataca 579  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  4680242 ttgcttcattaggaatatacaattaatgaatgatgagtgctaatgctataca 4680191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 423 - 540
Target Start/End: Complemental strand, 4713821 - 4713705
Alignment:
Q  423 acaaattaataacacaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaaacaaaatgcaataagatttcca 522  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| ||| |||||||| |||||| ||| || |||| |||||||| ||| |||  ||    
T  4713821 acaaattcataa-acaaacctgattgatcctgagcttgtatcaaaacaaaagtagtaaggacaccaaacaataccaaaagaaaatgcagtaacattctca 4713723  T
Q  523 tcattgtttgcttcatta 540  Q
    ||||||||||||||||||    
T  4713722 tcattgtttgcttcatta 4713705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 4905110 - 4905213
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    |||| ||||||||||| ||||| | |||||||||||||||||||||||| || ||||||| || |||||| || |||||||||||||||||||| |||||    
T  4905110 actttactgtatcccaaacatttgctccaaaatgaagatcaaattgtggagggtcatttaaatcatcataattaccataatagaaagtagctctaattaa 4905209  T
Q  101 atat 104  Q
    ||||    
T  4905210 atat 4905213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 423 - 556
Target Start/End: Complemental strand, 4725270 - 4725135
Alignment:
Q  423 acaaattaataacacaaacctgattgatcctgagcttgtatcaaaactaaaa---tagtaagggcaccaagcaacactaaaacaaaatgcaataagattt 519  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||||| ||||   |||||||  |||||| ||| || |||| ||||| |  ||| |||     
T  4725270 acaaattcataa-acaaacctgattgatcttgagcttgtatcaaaaccaaaatagtagtaagaacaccaaacaataccaaaagaaaatactgtaacattc 4725172  T
Q  520 ccatcattgtttgcttcattaggaatataattaatga 556  Q
    |||||||||||||||||||||||||||  ||||||||    
T  4725171 ccatcattgtttgcttcattaggaatactattaatga 4725135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 437 - 563
Target Start/End: Complemental strand, 4687968 - 4687842
Alignment:
Q  437 caaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaaacaaaatgcaataagatttccatcattgtttgcttc 536  Q
    ||||||||||||||||||||||||||| | ||| ||||||| |||| |||||| ||| || ||||  ||||||| ||  ||| | |||| ||||||||||    
T  4687968 caaacctgattgatcctgagcttgtatgagaaccaaaatagcaaggacaccaaacaagaccaaaaggaaatgcagtagcattcctatcactgtttgcttc 4687869  T
Q  537 attaggaatataattaatgaatgatga 563  Q
    |||| ||||| || ||| |||||||||    
T  4687868 attaagaatacaactaaggaatgatga 4687842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 423 - 527
Target Start/End: Complemental strand, 4744740 - 4744634
Alignment:
Q  423 acaaattaataacacaaacctgattgatcctgagcttgtatcaaaactaaaatagt---aagggcaccaagcaacactaaaacaaaatgcaataagattt 519  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||   |||| |||||| ||| || |||| |||||||| ||| |||     
T  4744740 acaaattcataa-acaaacctgattgatcctgagcttgtatcaaaacaaaaatagtaggaaggacaccaaacaataccaaaagaaaatgcagtaacattc 4744642  T
Q  520 ccatcatt 527  Q
    ||||||||    
T  4744641 ccatcatt 4744634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 437 - 540
Target Start/End: Complemental strand, 4702473 - 4702370
Alignment:
Q  437 caaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaaacaaaatgcaataagatttccatcattgtttgcttc 536  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| || |||  || ||  ||| |||||| | ||| |||  ||||| ||||||||||    
T  4702473 caaacctgattgatcctgagcttgtatcaaaaccaaaatagtaaggacagcaaataatacagaaaaaaaatgtagtaacattctcatcactgtttgcttc 4702374  T
Q  537 atta 540  Q
    ||||    
T  4702373 atta 4702370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 436 - 482
Target Start/End: Original strand, 21440707 - 21440753
Alignment:
Q  436 acaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagg 482  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  21440707 acaaacctgattgatcctgagcttgtatcaaaaccaaaatagtaagg 21440753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 423 - 479
Target Start/End: Complemental strand, 4735735 - 4735680
Alignment:
Q  423 acaaattaataacacaaacctgattgatcctgagcttgtatcaaaactaaaatagta 479  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  4735735 acaaattcataa-acaaacctgattgatcctgagcttgtatcaaaaccaaaatagta 4735680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 437 - 512
Target Start/End: Original strand, 4906199 - 4906274
Alignment:
Q  437 caaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaaacaaaatgcaat 512  Q
    ||||||||||||||||||||||||||||||||| ||||| || ||| ||||||| || ||  ||| ||||||||||    
T  4906199 caaacctgattgatcctgagcttgtatcaaaaccaaaattgtgaggacaccaagtaataccgaaagaaaatgcaat 4906274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 493
Target Start/End: Original strand, 4914678 - 4914735
Alignment:
Q  436 acaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaa 493  Q
    ||||| ||||||||||||||| ||||||| || | |||||||||||| ||||||||||    
T  4914678 acaaatctgattgatcctgaggttgtatcgaagccaaaatagtaaggacaccaagcaa 4914735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 293 - 328
Target Start/End: Complemental strand, 4725370 - 4725335
Alignment:
Q  293 ttcaggtatgccacaatctatgctaatgaatcctga 328  Q
    |||||||| |||||||||||||||||||||||||||    
T  4725370 ttcaggtaggccacaatctatgctaatgaatcctga 4725335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 328
Target Start/End: Complemental strand, 4744844 - 4744811
Alignment:
Q  295 caggtatgccacaatctatgctaatgaatcctga 328  Q
    |||||| |||||||||||||||||||||||||||    
T  4744844 caggtaggccacaatctatgctaatgaatcctga 4744811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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