View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10437_2D_low_1 (Length: 722)

Name: NF10437_2D_low_1
Description: NF10437_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10437_2D_low_1
NF10437_2D_low_1
[»] chr8 (30 HSPs)
chr8 (1-624)||(4876061-4876684)
chr8 (9-605)||(4925962-4926546)
chr8 (4-185)||(10445958-10446139)
chr8 (1-183)||(4714045-4714227)
chr8 (1-163)||(21440282-21440444)
chr8 (3-163)||(4702729-4702889)
chr8 (1-328)||(4688071-4688395)
chr8 (1-183)||(4995506-4995688)
chr8 (1-160)||(4777270-4777429)
chr8 (1-163)||(4680599-4680761)
chr8 (9-160)||(4725500-4725651)
chr8 (3-104)||(4745027-4745128)
chr8 (1-163)||(4914225-4914387)
chr8 (1-264)||(4891071-4891331)
chr8 (4-163)||(4735969-4736128)
chr8 (423-594)||(10445377-10445547)
chr8 (436-538)||(4777665-4777767)
chr8 (436-579)||(4680191-4680342)
chr8 (423-540)||(4713705-4713821)
chr8 (1-104)||(4905110-4905213)
chr8 (423-556)||(4725135-4725270)
chr8 (437-563)||(4687842-4687968)
chr8 (423-527)||(4744634-4744740)
chr8 (437-540)||(4702370-4702473)
chr8 (436-482)||(21440707-21440753)
chr8 (423-479)||(4735680-4735735)
chr8 (437-512)||(4906199-4906274)
chr8 (436-493)||(4914678-4914735)
chr8 (293-328)||(4725335-4725370)
chr8 (295-328)||(4744811-4744844)


Alignment Details
Target: chr8 (Bit Score: 596; Significance: 0; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 596; E-Value: 0
Query Start/End: Original strand, 1 - 624
Target Start/End: Original strand, 4876061 - 4876684
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4876061 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 4876160  T
Q  101 atattcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctccttacaaaatgtagttgctgttgacgagtaatcttctct 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4876161 atattgaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctccttacaaaatgtagttgctgttgatgagtaatcttctct 4876260  T
Q  201 gcaggtgctatactcattcttacacctgttcttatgaattcagcatctgaaatgtaatttatgcttgtgatattgtcagtgtagtttgaattttcaggta 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4876261 gcaggtgctatactcattcttacacctgttcttatgaattcagcatctgaaatgtaatttatgcttgtgatattgtcactgtagtttgaattttcaggta 4876360  T
Q  301 tgccacaatctatgctaatgaatcctgacaagagatatatgtagcaacaaagaaaacttcagctataacaatattaagtagtaacaactaacaactatat 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4876361 tgccacaatctatgctaatgaatcctgacaagagatatatgtagcaacaaagaaaacttcagctataacaatattaagtagtaacaactaacaactatat 4876460  T
Q  401 gtgtgacattaagcgacattatacaaattaataacacaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaa 500  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4876461 atgtgacattaagcgacattatacaaattaataacccaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaa 4876560  T
Q  501 acaaaatgcaataagatttccatcattgtttgcttcattaggaatataattaatgaatgatgagtgttaatgctatacaacgcagcatttataccgctag 600  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4876561 acaaaatgcaaaaagatttccatcattgtttgcttcattaggaatataattaatgaatgatcagtgttaatgctatacaacgcagcatttataccgctag 4876660  T
Q  601 agagtcaaatttgcttcaatttac 624  Q
    ||||||||||||||||||||||||    
T  4876661 agagtcaaatttgcttcaatttac 4876684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 9 - 605
Target Start/End: Original strand, 4925962 - 4926546
Alignment:
Q  9 gtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaaatattcaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||||||||||||||| ||    
T  4925962 gtatcccacacattaggtccaaaatgaagatcaaattgtggtggttcatttatattatcatagtttccataaaggaaagtagctctgattaaatattgaa 4926061  T
Q  109 tatccatgtttacatttattctgtagcaatttctcactccacttggaaagctccttacaaaatgtagttgctgttgacgagtaatcttctctgcaggtgc 208  Q
     | |||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||||||||||| |||||| |||||||| ||||||||||||     
T  4926062 cacccatgtttacatttattctgtaacagtttctaactccacttggaaagctccgtacaaaatgtagttgttgttgatgagtaatcatctctgcaggtga 4926161  T
Q  209 tatactcattcttacacctgttcttatgaattcagcatctgaaatgtaatttatgcttgtgatattgtcagtgtagtttgaattttcaggtatgccacaa 308  Q
    ||||||| | |||||||||||   ||||||||| |||||||| ||||| ||||||| |||||| || ||||||||||||||||||||||||| |||||||    
T  4926162 tatactcttacttacacctgtatctatgaattctgcatctgatatgtagtttatgcctgtgatcttctcagtgtagtttgaattttcaggtaggccacaa 4926261  T
Q  309 tctatgctaatgaatcctgacaagagatatatgtagcaacaaagaaaacttcagctataacaatattaagtagtaacaactaacaactatatgtgtgaca 408  Q
    |||||||| ||||||||||| |  | |||||||||| |||||||||||  |||||||||| |||||| ||          ||||||||| || |||||||    
T  4926262 tctatgctgatgaatcctgagataatatatatgtaggaacaaagaaaatatcagctataataatatttag----------taacaactagatatgtgaca 4926351  T
Q  409 ttaagcgacattatacaaattaataacacaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaaacaaaatg 508  Q
    | |||| ||  |||||||||||||||| | |||||||||||||||||||||||||||||||  ||||||||||  ||||||||||  |||||| |||||     
T  4926352 taaagcaactatatacaaattaataac-ccaacctgattgatcctgagcttgtatcaaaac-caaatagtaagaacaccaagcaatgctaaaagaaaatt 4926449  T
Q  509 caataagatttccatcattgtttgcttcattaggaatataattaatgaatgatgagtgttaatgctatacaacgcagcatttataccgctagagagt 605  Q
    || ||| |||  ||| |||||||||||||||||| ||| |||| ||||||||||| |  |||| |||| ||| | ||||| ||||| ||||||||||    
T  4926450 cagtaacattctcattattgtttgcttcattagggatacaatttatgaatgatgaatactaatactatgcaaggaagcatatatactgctagagagt 4926546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 10446139 - 10445958
Alignment:
Q  4 tcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaaata 103  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||| | |||||||||||||    
T  10446139 tcactgtatcccacacattaggtccaaaatgaagatcaaactgtggtgtttcatttagattatcatagtttccataatagaaagaaactctgattaaata 10446040  T
Q  104 ttcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctccttacaaaatgtagttgctgttga 185  Q
    || |||| |  |  | |||||||||||||| ||||||||||||||||| ||||||||||| ||| | | |||||||||||||    
T  10446039 ttgaataccacttgtaacatttattctgtaacaatttctcactccactaggaaagctcctcacatattctagttgctgttga 10445958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 4714227 - 4714045
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||| || |||||||||||| |||||||||| || |||||||||    
T  4714227 acttcactgtatcccaaacattaggtccaaaatgaagatcaaattctggtggctcatttaaatcatcatagtttccgtaatagaaagaagatctgattaa 4714128  T
Q  101 atattcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctccttacaaaatgtagttgctgtt 183  Q
    ||||| |||| |  |  |||||||||||||||| ||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  4714127 atatttaataccacttgttacatttattctgtaacaatttctcactccacttggaaagctcctcacatattgtagttcctgtt 4714045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 21440282 - 21440444
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||    
T  21440282 acttcactgtatcccacacattagctccaaaatgaagatcaaattgtggtggttcatttagattatcatagtttccataatagaaagaagctcttattaa 21440381  T
Q  101 atattcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctcct 163  Q
    ||||| | || |  |  ||||||||||| |||| || ||||||||||||||||||||||||||    
T  21440382 atatttagtaccacttgttacatttattttgtaacagtttctcactccacttggaaagctcct 21440444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 4702889 - 4702729
Alignment:
Q  3 ttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaaat 102  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  4702889 ttcactgtatcccagacattaggtccaaaatgaagatcaaattctgggggatcatttaaatcatcatagttaccataatagaaagtagctctgattaaat 4702790  T
Q  103 attcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctcct 163  Q
    ||| | ||||  |  |||||||||||||||| ||||||||||||||| | ||||| |||||    
T  4702789 atttagtatcacttgttacatttattctgtaacaatttctcactccattaggaaaactcct 4702729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 4688395 - 4688071
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    |||| ||||||||||| |||||||  |||||||||||||||||||||||||| || |||| || |||||||||||||||||||||||  |||||||||||    
T  4688395 actttactgtatcccaaacattagcgccaaaatgaagatcaaattgtggtggctcgtttaaatcatcatagtttccataatagaaagacgctctgattaa 4688296  T
Q  101 atattcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctccttacaaaatgtagttgctgttgacgagtaatcttctct 200  Q
    ||||| | ||||  |  |||||||||||||||| ||||||||||||||||| ||||| ||||| |||   | |||||| |||| |  | |||   |||||    
T  4688295 atatttagtatcacttgttacatttattctgtaacaatttctcactccactaggaaaactcctcacatgttctagttgttgtttaacaataa---tctct 4688199  T
Q  201 gcaggtgctatactcattcttacacctgttcttatgaattcagcatctgaaatgtaatttatgcttgtgatattgtcagtgtagtttgaattttcaggta 300  Q
    | ||| | ||| ||| | ||||||||||    ||||||||  |||||||||||||||||||||| ||||    | ||||  ||| |||||  ||||| ||    
T  4688198 gtaggaggtatcctcttacttacacctgaatctatgaatttggcatctgaaatgtaatttatgcctgtgtccgtttcagaatagcttgaaagttcagata 4688099  T
Q  301 tgccacaatctatgctaatgaatcctga 328  Q
      ||||||||||||||||||||||||||    
T  4688098 gaccacaatctatgctaatgaatcctga 4688071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 4995688 - 4995506
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||| |  ||||||||||||||||| |||||||||||||  |||||||||||    
T  4995688 acttcactgtatcccaaacattaggtccaaaatgaagatcaaattctggtggcttgtttagattatcatagttaccataatagaaagatgctctgattaa 4995589  T
Q  101 atattcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctccttacaaaatgtagttgctgtt 183  Q
    ||||| | || |  |   ||||||||||||||| || ||||||| |||| ||||||||||||| ||| | |||||||||||||    
T  4995588 atatttagtaccacttgctacatttattctgtaacagtttctcattccaattggaaagctcctcacatattgtagttgctgtt 4995506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 4777270 - 4777429
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||||||| || ||||||| || ||||||||| ||||||||||||| ||||||||||||    
T  4777270 acttcacagtatcccaaacattagctccaaaatgaagatcaaattgtggagggtcatttaaatcatcatagttaccataatagaaagaagctctgattaa 4777369  T
Q  101 atattcaatatc-catgtttacatttattctgtagcaatttctcactccacttggaaagct 160  Q
    ||||| | || |  ||| |||||||||||||||| ||||||||||||||||||||||||||    
T  4777370 atatttagtaccagatg-ttacatttattctgtaacaatttctcactccacttggaaagct 4777429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4680761 - 4680599
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || ||| ||||||||||||||||||| ||||||||||||    
T  4680761 actttactgtatcccaaacattaggtccaaaatgaagatcaaattgtggtggctcatttaaatcatcgtagtttccataatagaaagaagctctgattaa 4680662  T
Q  101 atattcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctcct 163  Q
    |||||   || |  || |||||| |||| |||| |||||| |||||||||| |||||||||||    
T  4680661 atatttggtaccattggttacatctattttgtaacaatttttcactccactgggaaagctcct 4680599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 4725651 - 4725500
Alignment:
Q  9 gtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaaatattcaa 108  Q
    |||||||| ||||||| ||||||||||||||||||||||||||| |  ||||||| ||||||||| ||||||||||||| ||||||||||||||||| |     
T  4725651 gtatcccaaacattagctccaaaatgaagatcaaattgtggtggcttgtttagatcatcatagttaccataatagaaagaagctctgattaaatatttag 4725552  T
Q  109 tatccatgtttacatttattctgtagcaatttctcactccacttggaaagct 160  Q
    || |  |  ||| ||||||| |||| ||||||||||||||||||||||||||    
T  4725551 taccacttgttatatttattttgtaacaatttctcactccacttggaaagct 4725500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 4745128 - 4745027
Alignment:
Q  3 ttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaaat 102  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||    
T  4745128 ttcaccgtatcccacacattagcaccaaaatgaagatcaaattgtggtggttgatttagattatcatagtttccataatagaaagaagctctgattaaat 4745029  T
Q  103 at 104  Q
    ||    
T  4745028 at 4745027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 4914225 - 4914387
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    |||| ||||| ||||| ||||||| ||||||||| |||||||||| |||||| | ||||||||||||||||||||||||||| |||| ||||||||||||    
T  4914225 actttactgtttcccaaacattagctccaaaatgtagatcaaattctggtggttgatttagattatcatagtttccataataaaaagaagctctgattaa 4914324  T
Q  101 atattcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctcct 163  Q
    ||||| | || |  |  |||||||||||||||| || ||||| |||||||| ||||| |||||    
T  4914325 atatttagtaccacttgttacatttattctgtaacagtttctaactccactaggaaaactcct 4914387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 4891071 - 4891331
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||| |  ||||||||||||||||||||||||   |||| || |||||| ||    
T  4891071 acttcactgtatcccacacattagctccaaagtgaagatcaaattgtggtggcttgtttagattatcatagtttccataaagaaaagaagttctgataaa 4891170  T
Q  101 atattcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctccttacaaaatgtagttgctgttgacgagtaatcttctct 200  Q
    ||||| | || |  |  ||||| ||||  |||| || ||||||||||||||||||||||| || ||| | | ||||||||||    ||| || ||| |||    
T  4891171 atatttagtaccacttgttacacttatgttgtaacagtttctcactccacttggaaagcttctcacatattctagttgctgt---agagaaaacttatct 4891267  T
Q  201 gcaggtgctatactcattcttacacctgttcttatgaattcagcatctgaaatgtaatttatgc 264  Q
    | | ||||||| ||| | |||||||| ||   ||||||||  |||||||| |||||||||||||    
T  4891268 gtacgtgctatcctcttgcttacaccagtatctatgaatttggcatctgatatgtaatttatgc 4891331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 4736128 - 4735969
Alignment:
Q  4 tcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaaata 103  Q
    |||||||| ||  |||||||||||||||||||||||||||||||||||| |  | || |  ||||||| ||||||||   ||||||||||||||||||||    
T  4736128 tcactgtagccaccacattaggtccaaaatgaagatcaaattgtggtggcttgtctaaaccatcatagcttccataaagaaaagtagctctgattaaata 4736029  T
Q  104 ttcaatatccatgtttacatttattctgtagcaatttctcactccacttggaaagctcct 163  Q
    || | || |  |  ||||||||||| |||| |||||||||||||||||||||||||||||    
T  4736028 tttagtaccacttgttacatttattttgtaacaatttctcactccacttggaaagctcct 4735969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 423 - 594
Target Start/End: Complemental strand, 10445547 - 10445377
Alignment:
Q  423 acaaattaataacacaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaaacaaaatgcaataagatttcca 522  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||  | |||||||| |   ||  |||||||| ||| |||  ||    
T  10445547 acaaattcataa-acaaacctgattgatcctgagcttgtatcaaaaccaaaatagtaagaacgccaagcaatatggaacgaaaatgcagtaacattctca 10445449  T
Q  523 tcattgtttgcttcattaggaatataattaatgaatgatgagtgttaatgctatacaacgcagcatttatac 594  Q
    |||||||||| ||||||||| ||| |||||  || |||| ||||||||| |||||||| | |||||||||||    
T  10445448 tcattgtttgtttcattagggatacaattatggactgataagtgttaattctatacaaggaagcatttatac 10445377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 436 - 538
Target Start/End: Original strand, 4777665 - 4777767
Alignment:
Q  436 acaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaaacaaaatgcaataagatttccatcattgtttgctt 535  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||| |||||||| ||| |||  ||| |||||||||||    
T  4777665 acaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagaccaccaagcaatgctaaaagaaaatgcagtaacattctcattattgtttgctt 4777764  T
Q  536 cat 538  Q
    |||    
T  4777765 cat 4777767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 436 - 579
Target Start/End: Complemental strand, 4680342 - 4680191
Alignment:
Q  436 acaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaaacaaaatgcaa------taagatttccatcattgt 529  Q
    ||||||||||||||||||||||||||| |||||| ||| |||||||| |||||| ||| ||| ||| |||||||||      ||| ||| | |||| | |    
T  4680342 acaaacctgattgatcctgagcttgtaccaaaaccaaagtagtaaggacaccaaacaatactgaaagaaaatgcaaaggcagtaacattcctatcaattt 4680243  T
Q  530 ttgcttcattaggaatat--aattaatgaatgatgagtgttaatgctataca 579  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  4680242 ttgcttcattaggaatatacaattaatgaatgatgagtgctaatgctataca 4680191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 423 - 540
Target Start/End: Complemental strand, 4713821 - 4713705
Alignment:
Q  423 acaaattaataacacaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaaacaaaatgcaataagatttcca 522  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| ||| |||||||| |||||| ||| || |||| |||||||| ||| |||  ||    
T  4713821 acaaattcataa-acaaacctgattgatcctgagcttgtatcaaaacaaaagtagtaaggacaccaaacaataccaaaagaaaatgcagtaacattctca 4713723  T
Q  523 tcattgtttgcttcatta 540  Q
    ||||||||||||||||||    
T  4713722 tcattgtttgcttcatta 4713705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 4905110 - 4905213
Alignment:
Q  1 acttcactgtatcccacacattaggtccaaaatgaagatcaaattgtggtggatcatttagattatcatagtttccataatagaaagtagctctgattaa 100  Q
    |||| ||||||||||| ||||| | |||||||||||||||||||||||| || ||||||| || |||||| || |||||||||||||||||||| |||||    
T  4905110 actttactgtatcccaaacatttgctccaaaatgaagatcaaattgtggagggtcatttaaatcatcataattaccataatagaaagtagctctaattaa 4905209  T
Q  101 atat 104  Q
    ||||    
T  4905210 atat 4905213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 423 - 556
Target Start/End: Complemental strand, 4725270 - 4725135
Alignment:
Q  423 acaaattaataacacaaacctgattgatcctgagcttgtatcaaaactaaaa---tagtaagggcaccaagcaacactaaaacaaaatgcaataagattt 519  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||||| ||||   |||||||  |||||| ||| || |||| ||||| |  ||| |||     
T  4725270 acaaattcataa-acaaacctgattgatcttgagcttgtatcaaaaccaaaatagtagtaagaacaccaaacaataccaaaagaaaatactgtaacattc 4725172  T
Q  520 ccatcattgtttgcttcattaggaatataattaatga 556  Q
    |||||||||||||||||||||||||||  ||||||||    
T  4725171 ccatcattgtttgcttcattaggaatactattaatga 4725135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 437 - 563
Target Start/End: Complemental strand, 4687968 - 4687842
Alignment:
Q  437 caaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaaacaaaatgcaataagatttccatcattgtttgcttc 536  Q
    ||||||||||||||||||||||||||| | ||| ||||||| |||| |||||| ||| || ||||  ||||||| ||  ||| | |||| ||||||||||    
T  4687968 caaacctgattgatcctgagcttgtatgagaaccaaaatagcaaggacaccaaacaagaccaaaaggaaatgcagtagcattcctatcactgtttgcttc 4687869  T
Q  537 attaggaatataattaatgaatgatga 563  Q
    |||| ||||| || ||| |||||||||    
T  4687868 attaagaatacaactaaggaatgatga 4687842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 423 - 527
Target Start/End: Complemental strand, 4744740 - 4744634
Alignment:
Q  423 acaaattaataacacaaacctgattgatcctgagcttgtatcaaaactaaaatagt---aagggcaccaagcaacactaaaacaaaatgcaataagattt 519  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||   |||| |||||| ||| || |||| |||||||| ||| |||     
T  4744740 acaaattcataa-acaaacctgattgatcctgagcttgtatcaaaacaaaaatagtaggaaggacaccaaacaataccaaaagaaaatgcagtaacattc 4744642  T
Q  520 ccatcatt 527  Q
    ||||||||    
T  4744641 ccatcatt 4744634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 437 - 540
Target Start/End: Complemental strand, 4702473 - 4702370
Alignment:
Q  437 caaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaaacaaaatgcaataagatttccatcattgtttgcttc 536  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| || |||  || ||  ||| |||||| | ||| |||  ||||| ||||||||||    
T  4702473 caaacctgattgatcctgagcttgtatcaaaaccaaaatagtaaggacagcaaataatacagaaaaaaaatgtagtaacattctcatcactgtttgcttc 4702374  T
Q  537 atta 540  Q
    ||||    
T  4702373 atta 4702370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 436 - 482
Target Start/End: Original strand, 21440707 - 21440753
Alignment:
Q  436 acaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagg 482  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  21440707 acaaacctgattgatcctgagcttgtatcaaaaccaaaatagtaagg 21440753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 423 - 479
Target Start/End: Complemental strand, 4735735 - 4735680
Alignment:
Q  423 acaaattaataacacaaacctgattgatcctgagcttgtatcaaaactaaaatagta 479  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  4735735 acaaattcataa-acaaacctgattgatcctgagcttgtatcaaaaccaaaatagta 4735680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 437 - 512
Target Start/End: Original strand, 4906199 - 4906274
Alignment:
Q  437 caaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaacactaaaacaaaatgcaat 512  Q
    ||||||||||||||||||||||||||||||||| ||||| || ||| ||||||| || ||  ||| ||||||||||    
T  4906199 caaacctgattgatcctgagcttgtatcaaaaccaaaattgtgaggacaccaagtaataccgaaagaaaatgcaat 4906274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 493
Target Start/End: Original strand, 4914678 - 4914735
Alignment:
Q  436 acaaacctgattgatcctgagcttgtatcaaaactaaaatagtaagggcaccaagcaa 493  Q
    ||||| ||||||||||||||| ||||||| || | |||||||||||| ||||||||||    
T  4914678 acaaatctgattgatcctgaggttgtatcgaagccaaaatagtaaggacaccaagcaa 4914735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 293 - 328
Target Start/End: Complemental strand, 4725370 - 4725335
Alignment:
Q  293 ttcaggtatgccacaatctatgctaatgaatcctga 328  Q
    |||||||| |||||||||||||||||||||||||||    
T  4725370 ttcaggtaggccacaatctatgctaatgaatcctga 4725335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 328
Target Start/End: Complemental strand, 4744844 - 4744811
Alignment:
Q  295 caggtatgccacaatctatgctaatgaatcctga 328  Q
    |||||| |||||||||||||||||||||||||||    
T  4744844 caggtaggccacaatctatgctaatgaatcctga 4744811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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