View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10438_low_15 (Length: 336)

Name: NF10438_low_15
Description: NF10438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10438_low_15
NF10438_low_15
[»] chr2 (45 HSPs)
chr2 (12-250)||(21624294-21624527)
chr2 (165-250)||(2438666-2438751)
chr2 (165-250)||(18840960-18841045)
chr2 (165-314)||(38117106-38117253)
chr2 (165-247)||(15972903-15972985)
chr2 (166-250)||(5040761-5040845)
chr2 (165-250)||(28596496-28596581)
chr2 (165-250)||(37559004-37559089)
chr2 (171-250)||(12224250-12224329)
chr2 (169-249)||(27460065-27460142)
chr2 (196-250)||(30404828-30404882)
chr2 (165-250)||(34006937-34007023)
chr2 (177-250)||(5367219-5367292)
chr2 (165-250)||(6940282-6940367)
chr2 (197-250)||(20242706-20242759)
chr2 (170-249)||(14996171-14996254)
chr2 (165-229)||(24009343-24009407)
chr2 (165-229)||(35056927-35056991)
chr2 (165-229)||(37419802-37419866)
chr2 (263-317)||(21374742-21374797)
chr2 (165-228)||(26769571-26769634)
chr2 (171-250)||(29176446-29176525)
chr2 (216-250)||(19536395-19536429)
chr2 (263-317)||(26769473-26769527)
chr2 (165-223)||(42511329-42511387)
chr2 (165-250)||(21091750-21091835)
chr2 (165-250)||(34993929-34994014)
chr2 (218-250)||(18421990-18422022)
chr2 (165-229)||(30717466-30717530)
chr2 (219-250)||(11223864-11223895)
chr2 (165-236)||(19580232-19580303)
chr2 (217-248)||(44635527-44635558)
chr2 (165-223)||(36756280-36756338)
chr2 (216-249)||(20473350-20473383)
chr2 (197-250)||(43585984-43586037)
chr2 (218-246)||(974778-974806)
chr2 (218-250)||(12668423-12668455)
chr2 (218-250)||(15657891-15657923)
chr2 (218-250)||(23058442-23058474)
chr2 (218-250)||(30717530-30717562)
chr2 (178-250)||(31808104-31808176)
chr2 (218-250)||(33153451-33153483)
chr2 (218-246)||(33884082-33884110)
chr2 (218-250)||(36756344-36756376)
chr2 (165-229)||(44860379-44860443)
[»] chr6 (52 HSPs)
chr6 (165-250)||(34595161-34595246)
chr6 (165-250)||(28152125-28152210)
chr6 (165-250)||(32978846-32978931)
chr6 (165-250)||(7977777-7977862)
chr6 (165-250)||(28715322-28715407)
chr6 (165-250)||(4877970-4878054)
chr6 (165-250)||(7265540-7265625)
chr6 (165-250)||(17841536-17841621)
chr6 (165-247)||(8776915-8777002)
chr6 (165-250)||(9658906-9658992)
chr6 (165-250)||(12696351-12696441)
chr6 (165-250)||(6898228-6898313)
chr6 (165-250)||(32511613-32511698)
chr6 (170-250)||(853811-853891)
chr6 (165-229)||(9107306-9107370)
chr6 (165-229)||(16766756-16766820)
chr6 (170-250)||(16833335-16833415)
chr6 (165-228)||(8389415-8389478)
chr6 (166-214)||(17302631-17302679)
chr6 (165-250)||(31384947-31385042)
chr6 (171-250)||(33001242-33001321)
chr6 (175-247)||(1191660-1191729)
chr6 (196-250)||(24645508-24645562)
chr6 (165-207)||(31959220-31959262)
chr6 (216-249)||(16388215-16388248)
chr6 (263-319)||(5970151-5970207)
chr6 (165-229)||(7248417-7248481)
chr6 (165-229)||(8365455-8365519)
chr6 (218-250)||(9911528-9911560)
chr6 (165-229)||(10339061-10339125)
chr6 (218-250)||(10770674-10770706)
chr6 (197-245)||(23771610-23771658)
chr6 (166-229)||(26247479-26247542)
chr6 (165-208)||(7625185-7625228)
chr6 (178-229)||(9522950-9523001)
chr6 (170-240)||(1315969-1316039)
chr6 (167-213)||(2545509-2545555)
chr6 (220-250)||(9522918-9522948)
chr6 (167-229)||(10827493-10827555)
chr6 (180-250)||(12627539-12627609)
chr6 (263-317)||(12868718-12868772)
chr6 (165-223)||(17327597-17327655)
chr6 (167-250)||(21395262-21395340)
chr6 (216-250)||(26402678-26402712)
chr6 (165-250)||(7378006-7378091)
chr6 (217-250)||(7801155-7801188)
chr6 (218-247)||(9107370-9107399)
chr6 (165-250)||(13360320-13360404)
chr6 (213-249)||(6327513-6327549)
chr6 (218-250)||(8365519-8365551)
chr6 (165-229)||(18367895-18367959)
chr6 (165-201)||(34446647-34446683)
[»] chr5 (38 HSPs)
chr5 (165-250)||(21191003-21191088)
chr5 (165-250)||(21576692-21576777)
chr5 (165-250)||(30098985-30099070)
chr5 (169-250)||(42893387-42893468)
chr5 (165-250)||(43564908-43564993)
chr5 (163-229)||(21522809-21522875)
chr5 (163-229)||(21533375-21533441)
chr5 (163-229)||(21542089-21542155)
chr5 (165-248)||(30502335-30502418)
chr5 (165-248)||(30542678-30542761)
chr5 (171-248)||(26312798-26312875)
chr5 (166-250)||(31084350-31084439)
chr5 (171-250)||(27932262-27932341)
chr5 (170-249)||(32630687-32630766)
chr5 (216-250)||(6247649-6247683)
chr5 (165-250)||(14873544-14873634)
chr5 (170-249)||(15382507-15382592)
chr5 (216-250)||(15884015-15884049)
chr5 (165-250)||(43001827-43001917)
chr5 (166-210)||(17088358-17088402)
chr5 (165-229)||(39268545-39268609)
chr5 (165-229)||(39698600-39698664)
chr5 (219-250)||(21351906-21351937)
chr5 (216-250)||(8420054-8420088)
chr5 (216-250)||(24906299-24906333)
chr5 (165-223)||(30098391-30098449)
chr5 (216-250)||(33178052-33178086)
chr5 (165-250)||(4105286-4105371)
chr5 (165-246)||(21194070-21194151)
chr5 (169-250)||(28588625-28588706)
chr5 (165-206)||(38464320-38464361)
chr5 (165-229)||(6401557-6401621)
chr5 (222-250)||(7218271-7218299)
chr5 (218-250)||(13287399-13287431)
chr5 (165-229)||(18592132-18592196)
chr5 (263-311)||(31084291-31084339)
chr5 (218-250)||(39698568-39698600)
chr5 (218-250)||(41633762-41633794)
[»] scaffold0652 (1 HSPs)
scaffold0652 (165-247)||(409-491)
[»] chr4 (48 HSPs)
chr4 (165-250)||(23292933-23293018)
chr4 (170-250)||(21945530-21945610)
chr4 (165-250)||(35161063-35161148)
chr4 (181-246)||(38846975-38847040)
chr4 (169-250)||(49431053-49431134)
chr4 (165-250)||(3947708-3947798)
chr4 (169-250)||(28964199-28964280)
chr4 (165-317)||(42640488-42640636)
chr4 (165-250)||(2361922-2362007)
chr4 (165-250)||(4157176-4157261)
chr4 (165-250)||(4672032-4672117)
chr4 (165-250)||(8423665-8423750)
chr4 (169-250)||(16073421-16073502)
chr4 (189-250)||(29205471-29205532)
chr4 (181-242)||(34306767-34306828)
chr4 (165-250)||(35157932-35158017)
chr4 (165-250)||(715552-715639)
chr4 (165-250)||(752878-752965)
chr4 (165-229)||(30982814-30982878)
chr4 (181-250)||(9996867-9996936)
chr4 (165-250)||(12797285-12797370)
chr4 (165-250)||(12895221-12895306)
chr4 (201-250)||(54580006-54580055)
chr4 (170-250)||(4157463-4157543)
chr4 (165-229)||(5414108-5414172)
chr4 (175-250)||(40481663-40481743)
chr4 (166-224)||(848015-848073)
chr4 (165-211)||(20743213-20743259)
chr4 (165-229)||(53381537-53381602)
chr4 (173-229)||(15724498-15724554)
chr4 (165-229)||(19482727-19482791)
chr4 (165-250)||(28084549-28084636)
chr4 (218-250)||(30298974-30299006)
chr4 (218-250)||(30327842-30327874)
chr4 (263-314)||(7251670-7251721)
chr4 (216-250)||(6879463-6879497)
chr4 (165-219)||(18966567-18966621)
chr4 (219-249)||(28000743-28000773)
chr4 (169-250)||(482194-482270)
chr4 (165-206)||(11931362-11931403)
chr4 (165-230)||(12323967-12324032)
chr4 (165-206)||(17876237-17876278)
chr4 (162-211)||(21873306-21873355)
chr4 (162-211)||(21929167-21929216)
chr4 (169-213)||(7424722-7424765)
chr4 (218-250)||(11596352-11596384)
chr4 (165-229)||(22234826-22234890)
chr4 (165-201)||(40784029-40784065)
[»] chr1 (52 HSPs)
chr1 (171-250)||(18190061-18190140)
chr1 (165-250)||(18337356-18337441)
chr1 (173-250)||(51410052-51410129)
chr1 (165-247)||(37598861-37598943)
chr1 (165-247)||(42359396-42359478)
chr1 (165-250)||(22515834-22515919)
chr1 (169-250)||(40258884-40258965)
chr1 (166-250)||(1815284-1815368)
chr1 (165-249)||(46348330-46348414)
chr1 (172-250)||(40181898-40181976)
chr1 (170-229)||(19562567-19562626)
chr1 (165-250)||(1486651-1486741)
chr1 (165-250)||(5898213-5898298)
chr1 (173-317)||(38078616-38078759)
chr1 (167-250)||(18471327-18471405)
chr1 (169-250)||(1704946-1705024)
chr1 (165-229)||(31694646-31694710)
chr1 (165-229)||(32461400-32461464)
chr1 (165-229)||(40917808-40917872)
chr1 (216-250)||(19058854-19058888)
chr1 (216-250)||(24334703-24334737)
chr1 (169-250)||(2896072-2896153)
chr1 (170-211)||(15323234-15323275)
chr1 (213-250)||(21378605-21378642)
chr1 (218-250)||(6612171-6612203)
chr1 (165-229)||(9828103-9828167)
chr1 (218-250)||(24577186-24577218)
chr1 (165-229)||(25934675-25934739)
chr1 (169-249)||(39130718-39130798)
chr1 (180-248)||(43492456-43492524)
chr1 (218-250)||(47989524-47989556)
chr1 (165-229)||(47989556-47989620)
chr1 (165-247)||(16297228-16297312)
chr1 (165-208)||(46940755-46940798)
chr1 (165-243)||(10577682-10577760)
chr1 (216-311)||(22881614-22881707)
chr1 (219-249)||(28273089-28273119)
chr1 (165-207)||(29144327-29144369)
chr1 (216-250)||(41877468-41877502)
chr1 (165-250)||(26830615-26830699)
chr1 (218-250)||(113326-113358)
chr1 (218-250)||(2218266-2218298)
chr1 (218-250)||(5376500-5376532)
chr1 (165-249)||(5927287-5927371)
chr1 (218-250)||(5944310-5944342)
chr1 (165-229)||(5944342-5944406)
chr1 (218-250)||(6332697-6332729)
chr1 (165-221)||(6427531-6427587)
chr1 (181-249)||(11605898-11605966)
chr1 (218-250)||(30173762-30173794)
chr1 (216-248)||(31672893-31672925)
chr1 (218-250)||(31694710-31694742)
[»] chr3 (49 HSPs)
chr3 (165-250)||(55401102-55401187)
chr3 (163-250)||(15999955-16000048)
chr3 (165-250)||(20503492-20503577)
chr3 (169-250)||(28918028-28918111)
chr3 (171-249)||(7171529-7171607)
chr3 (173-250)||(10954979-10955056)
chr3 (169-250)||(40993286-40993367)
chr3 (166-250)||(18426976-18427060)
chr3 (165-250)||(51206300-51206385)
chr3 (165-250)||(11252005-11252088)
chr3 (165-250)||(25775536-25775619)
chr3 (165-250)||(27505273-27505363)
chr3 (165-229)||(15796230-15796294)
chr3 (167-229)||(4987229-4987291)
chr3 (263-317)||(21479080-21479134)
chr3 (165-250)||(3631711-3631796)
chr3 (165-229)||(14209172-14209236)
chr3 (165-243)||(13845472-13845550)
chr3 (263-317)||(14747523-14747577)
chr3 (197-247)||(25093532-25093582)
chr3 (165-250)||(35222965-35223050)
chr3 (202-250)||(3865701-3865749)
chr3 (165-250)||(8789495-8789582)
chr3 (165-229)||(41961586-41961650)
chr3 (165-229)||(55213021-55213085)
chr3 (171-229)||(8039265-8039324)
chr3 (196-247)||(26492183-26492234)
chr3 (216-250)||(8587019-8587053)
chr3 (216-250)||(8593164-8593198)
chr3 (165-223)||(14216957-14217015)
chr3 (165-223)||(14223086-14223144)
chr3 (203-249)||(15505775-15505821)
chr3 (167-249)||(23657767-23657849)
chr3 (165-250)||(24204988-24205073)
chr3 (165-207)||(34185059-34185101)
chr3 (216-249)||(8383285-8383318)
chr3 (165-249)||(12100297-12100381)
chr3 (165-229)||(12704598-12704663)
chr3 (165-229)||(25074842-25074907)
chr3 (221-250)||(26508137-26508166)
chr3 (218-247)||(34185123-34185152)
chr3 (165-206)||(37077441-37077482)
chr3 (218-250)||(1509566-1509598)
chr3 (165-249)||(4466547-4466631)
chr3 (218-250)||(4990967-4990999)
chr3 (218-250)||(28812542-28812574)
chr3 (218-250)||(34910344-34910376)
chr3 (165-209)||(40052380-40052424)
chr3 (218-250)||(49651786-49651818)
[»] chr7 (39 HSPs)
chr7 (165-250)||(9778527-9778617)
chr7 (165-250)||(13770718-13770808)
chr7 (165-250)||(21880179-21880264)
chr7 (165-250)||(5409778-5409868)
chr7 (165-250)||(15680836-15680921)
chr7 (165-250)||(32287410-32287495)
chr7 (165-249)||(21864836-21864920)
chr7 (166-250)||(33994239-33994323)
chr7 (171-246)||(24105709-24105784)
chr7 (194-248)||(7197273-7197327)
chr7 (178-250)||(8234173-8234245)
chr7 (165-240)||(598245-598320)
chr7 (165-248)||(20549820-20549903)
chr7 (169-250)||(12278862-12278943)
chr7 (165-250)||(43027411-43027501)
chr7 (165-246)||(40287309-40287385)
chr7 (165-229)||(24339701-24339765)
chr7 (165-250)||(32093961-32094052)
chr7 (169-250)||(1401052-1401131)
chr7 (165-250)||(25481929-25482014)
chr7 (218-250)||(18039026-18039058)
chr7 (218-250)||(21560530-21560562)
chr7 (218-250)||(24339669-24339701)
chr7 (170-250)||(26733331-26733411)
chr7 (218-250)||(27945068-27945100)
chr7 (218-249)||(11272586-11272617)
chr7 (165-228)||(11665376-11665439)
chr7 (166-229)||(26033398-26033461)
chr7 (165-211)||(17852066-17852112)
chr7 (216-250)||(28155597-28155631)
chr7 (165-202)||(8842286-8842323)
chr7 (165-250)||(18035812-18035896)
chr7 (180-229)||(21930687-21930736)
chr7 (169-214)||(22868110-22868155)
chr7 (218-247)||(25822685-25822714)
chr7 (218-250)||(2334277-2334309)
chr7 (218-250)||(3991351-3991383)
chr7 (218-250)||(9408334-9408366)
chr7 (222-250)||(26033465-26033493)
[»] chr8 (44 HSPs)
chr8 (166-250)||(40332218-40332302)
chr8 (169-249)||(15023208-15023288)
chr8 (165-247)||(36450701-36450783)
chr8 (165-242)||(5813627-5813704)
chr8 (165-230)||(29510240-29510305)
chr8 (169-250)||(31557023-31557104)
chr8 (165-238)||(4498342-4498415)
chr8 (169-250)||(20679346-20679427)
chr8 (165-245)||(926735-926815)
chr8 (201-314)||(22595959-22596070)
chr8 (165-243)||(3951483-3951561)
chr8 (165-250)||(3025578-3025663)
chr8 (165-250)||(18407746-18407831)
chr8 (165-250)||(33405331-33405416)
chr8 (165-229)||(22652035-22652099)
chr8 (165-229)||(34450968-34451032)
chr8 (195-250)||(20873096-20873151)
chr8 (166-229)||(24205756-24205819)
chr8 (216-250)||(4948679-4948713)
chr8 (169-207)||(8798804-8798842)
chr8 (165-243)||(43737758-43737836)
chr8 (165-222)||(6065593-6065650)
chr8 (165-250)||(8342999-8343079)
chr8 (165-250)||(26434207-26434292)
chr8 (213-250)||(30077382-30077419)
chr8 (166-250)||(14134726-14134810)
chr8 (218-250)||(24669460-24669492)
chr8 (218-250)||(25566868-25566900)
chr8 (165-204)||(4673361-4673400)
chr8 (165-228)||(29447046-29447109)
chr8 (171-250)||(31580080-31580159)
chr8 (166-240)||(126295-126369)
chr8 (204-250)||(4786324-4786370)
chr8 (165-211)||(22197678-22197724)
chr8 (216-250)||(24613547-24613581)
chr8 (216-250)||(30271253-30271287)
chr8 (165-207)||(40064032-40064074)
chr8 (177-206)||(14513127-14513156)
chr8 (170-211)||(22943301-22943342)
chr8 (165-250)||(24413506-24413591)
chr8 (218-250)||(2572056-2572088)
chr8 (165-229)||(11803318-11803382)
chr8 (165-229)||(15816065-15816129)
chr8 (165-201)||(34127179-34127215)
[»] scaffold0083 (1 HSPs)
scaffold0083 (165-250)||(45477-45562)
[»] scaffold0053 (1 HSPs)
scaffold0053 (165-242)||(8833-8910)
[»] scaffold0050 (1 HSPs)
scaffold0050 (165-250)||(70305-70390)
[»] scaffold0361 (1 HSPs)
scaffold0361 (165-250)||(14557-14639)
[»] scaffold0793 (1 HSPs)
scaffold0793 (165-250)||(4828-4915)
[»] scaffold0019 (1 HSPs)
scaffold0019 (165-229)||(71784-71848)
[»] scaffold0009 (2 HSPs)
scaffold0009 (175-250)||(174510-174585)
scaffold0009 (175-250)||(180023-180098)
[»] scaffold0022 (1 HSPs)
scaffold0022 (171-249)||(90871-90949)
[»] scaffold0306 (1 HSPs)
scaffold0306 (165-229)||(13454-13518)
[»] scaffold0246 (1 HSPs)
scaffold0246 (175-250)||(19602-19682)
[»] scaffold0152 (1 HSPs)
scaffold0152 (165-229)||(21809-21873)
[»] scaffold0086 (1 HSPs)
scaffold0086 (165-229)||(2987-3051)
[»] scaffold0003 (1 HSPs)
scaffold0003 (165-229)||(241653-241717)
[»] scaffold0512 (1 HSPs)
scaffold0512 (165-240)||(4983-5058)
[»] scaffold0475 (1 HSPs)
scaffold0475 (165-247)||(3338-3420)
[»] scaffold0044 (1 HSPs)
scaffold0044 (164-229)||(53239-53304)
[»] scaffold0025 (1 HSPs)
scaffold0025 (218-250)||(23797-23829)
[»] scaffold0380 (1 HSPs)
scaffold0380 (165-240)||(8638-8713)
[»] scaffold0004 (2 HSPs)
scaffold0004 (219-250)||(123655-123686)
scaffold0004 (218-250)||(83187-83219)
[»] scaffold0154 (1 HSPs)
scaffold0154 (167-229)||(13472-13534)
[»] scaffold0021 (1 HSPs)
scaffold0021 (221-250)||(130509-130538)
[»] scaffold0722 (1 HSPs)
scaffold0722 (206-250)||(7020-7064)
[»] scaffold0450 (1 HSPs)
scaffold0450 (165-229)||(8571-8635)
[»] scaffold0223 (1 HSPs)
scaffold0223 (218-250)||(20199-20231)
[»] scaffold0171 (1 HSPs)
scaffold0171 (218-250)||(23447-23479)
[»] scaffold0136 (1 HSPs)
scaffold0136 (218-250)||(3849-3881)
[»] scaffold0027 (1 HSPs)
scaffold0027 (218-250)||(46709-46741)


Alignment Details
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 21624527 - 21624294
Alignment:
Q  12 gcaaagggagcaatatatggctaaacttatgaagtttgcttattttatgattctcttcctttctctgtatcttgttgcaagtaagccatttccccttaca 111  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21624527 gcaaagggagcaatatatggctaaacttatgaagtttgtttattttatgattctcttcctttctctgtatcttgttgcaagtaagccatttccccttaca 21624428  T
Q  112 agcactgactataagccgtcttttaaagtctcatctttacttattatctatatgcacggacactccttggattaggtgtgttccggtgtcggacacgtgt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||     
T  21624427 agcactgactataagccgtcttttaaagtctcatctttacttattacctatatgcacggacactccttggattaggtgtgtcccgctgtcggacacgtg- 21624329  T
Q  212 tgtatccgacaccgacacttgtaattacactgaattatg 250  Q
        |||||||||||||||||||||||||||||||||||    
T  21624328 ----tccgacaccgacacttgtaattacactgaattatg 21624294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 2438666 - 2438751
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| |||| ||||||||||||| |||| || |||||||||||||||||||||||||||||||||||    
T  2438666 gcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatg 2438751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 18840960 - 18841045
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| ||||||||||||| ||||||||||||| |||| || || |||||||||||||||||||||||| |||||||    
T  18840960 gcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatg 18841045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 165 - 314
Target Start/End: Original strand, 38117106 - 38117253
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgnnnnnnnnnnnnaa 264  Q
    |||||||||| ||| |||||||| |||| ||||||||||||||||||||| ||||||||| |||||||||||||||| ||| ||||            ||    
T  38117106 gcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatg--tgattttttcaa 38117203  T
Q  265 attattagctgtgtcggcgtgttcgtgttgtgtccggtatccgtgtccgt 314  Q
    ||||||||||||||||||||||  |||| ||||||||| ||||| |||||    
T  38117204 attattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgtatccgt 38117253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 15972985 - 15972903
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 247  Q
    ||||||||| || | ||||||||||||| |||| ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  15972985 gcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaatt 15972903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 5040845 - 5040761
Alignment:
Q  166 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||| |||| |||| |||| ||||||||| ||| || ||||||||||||||||||||||||| |||||||||    
T  5040845 cacggacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttgtaattacattgaattatg 5040761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 28596581 - 28596496
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| |||| |  ||||||||||||||| || |||||||||||||||| |||||||||||| |||||    
T  28596581 gcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgacttatg 28596496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 37559089 - 37559004
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||| | |||| ||||||||||||||||||    ||||||||||||||||||||||||| |||||||||    
T  37559089 gcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatg 37559004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 12224329 - 12224250
Alignment:
Q  171 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||| |||| || ||||||||||||| | || ||||||||||||||||||||||||| || ||||||    
T  12224329 acactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacacttgtaattacattggattatg 12224250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 27460142 - 27460065
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 249  Q
    ||||||||||||||||||  |||| ||||||| ||| ||||||    |||||||||||| |||||||||||||||||||||    
T  27460142 ggacactccttggattagacgtgtcccggtgttggatacgtgtg---tccgacaccgacccttgtaattacactgaattat 27460065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 30404828 - 30404882
Alignment:
Q  196 ggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||| |||| || |||||| ||||||||||||||||||||||||||||    
T  30404828 ggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatg 30404882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 34006937 - 34007023
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgt-tgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||| |||||||||||||||||||| ||||||  |  || ||| |||||||||| | | ||||||||||||||||    
T  34006937 gcacggacactccttgaattaggtgtgttccggtgtcagacacgaataggtgtcccacaccgacacctatgattacactgaattatg 34007023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 250
Target Start/End: Complemental strand, 5367292 - 5367219
Alignment:
Q  177 cttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||| |||| |||| |||||| | |||| || |||||||||||||| | ||||||||||||||||||    
T  5367292 cttggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatg 5367219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 6940367 - 6940282
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||| || || ||||||||||||   ||||| |||||||||| || || || ||||||||||||||||||||| |||||||    
T  6940367 gcacggacaatcatttgattaggtgtgtcttggtgttggacacgtgtcgtgtcggataccgacacttgtaattacacttaattatg 6940282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 20242706 - 20242759
Alignment:
Q  197 gtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| |||||||||||| |||||||||||||| | ||||||||||||||||||    
T  20242706 gtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatg 20242759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 249
Target Start/End: Original strand, 14996171 - 14996254
Alignment:
Q  170 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatcc-----gacaccgacacttgtaattacactgaattat 249  Q
    ||||||||| |||||||| ||||||||||||| |||||||| ||| |||     |||||||||||||||||||||||| ||||||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacacgtg-tgtgtccgacaagacaccgacacttgtaattacactaaattat 14996254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 24009407 - 24009343
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||||||||||| ||| |||| || ||||| ||||||||| || ||||||||||||||    
T  24009407 gcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 24009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 35056991 - 35056927
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||||||  ||||||| ||||| | ||||||||||||||| || ||||||||||||||    
T  35056991 gcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 37419866 - 37419802
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||||| |||||||| |||| |||||||||||||||  | || ||||||||||||||    
T  37419866 gcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacac 37419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 21374742 - 21374797
Alignment:
Q  263 aaattattagctgtgtcggcgtgttcgtgt-tgtgtccggtatccgtgtccgtatc 317  Q
    ||||||||||||||||||||||||| ||||  ||||||||| ||||||||||||||    
T  21374742 aaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtccgtgtccgtatc 21374797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 26769634 - 26769571
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgaca 228  Q
    |||||||||||||| |||||||| |||| || ||||||||||||||| || ||||| |||||||    
T  26769634 gcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgaca 26769571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 29176446 - 29176525
Alignment:
Q  171 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| ||||||||||||||||  | |||||||||| |||  || ||| ||||| |||||| ||||||||||||||||||    
T  29176446 acacttcttggattaggtgtgtctcagtgtcggacatgtgccgtgtccaacaccaacacttataattacactgaattatg 29176525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 19536395 - 19536429
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||||    
T  19536395 tccgacaccgacacttgtaattacactgaattatg 19536429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 26769527 - 26769473
Alignment:
Q  263 aaattattagctgtgtcggcgtgttcgtgttgtgtccggtatccgtgtccgtatc 317  Q
    |||||||||| |||||||||||||  |||| ||||||||| ||||||||||||||    
T  26769527 aaattattagttgtgtcggcgtgtctgtgtcgtgtccggtgtccgtgtccgtatc 26769473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 42511329 - 42511387
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac 223  Q
    |||||||||||||| |||||||  |||| || |||||||||||||||||| ||||||||    
T  42511329 gcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacac 42511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 21091835 - 21091750
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||| | ||| ||||||||| |||||||| |||| |||   | || ||||| ||||||||||||||||||||| ||||    
T  21091835 gcacggacactcttcggaataggtgtgtcccggtgtccgacaggtggcttgtctgacactgacacttgtaattacactgaagtatg 21091750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 34993929 - 34994014
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| |||||||||| |||||| |||| || ||||||||||| ||| || | |||||| ||||| | |||||||| |||||||||    
T  34993929 gcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattacattgaattatg 34994014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 18422022 - 18421990
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatg 18421990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 30717466 - 30717530
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||||||||||||||| || | || |||||| |||||||| || ||||||| ||||||    
T  30717466 gcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacac 30717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 250
Target Start/End: Original strand, 11223864 - 11223895
Alignment:
Q  219 gacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||||||||||    
T  11223864 gacaccgacacttgtaattacactgaattatg 11223895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 19580232 - 19580303
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaat 236  Q
    |||| ||||||| | ||||||| ||||||  ||||| ||||||||||||| ||||||||||| |||| ||||    
T  19580232 gcacagacactcttcggattagatgtgttttggtgttggacacgtgttgtgtccgacaccgatacttataat 19580303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 248
Target Start/End: Complemental strand, 44635558 - 44635527
Alignment:
Q  217 ccgacaccgacacttgtaattacactgaatta 248  Q
    ||||||||||||||||||||||||||||||||    
T  44635558 ccgacaccgacacttgtaattacactgaatta 44635527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 36756280 - 36756338
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac 223  Q
    |||| ||||||||| |||||||| ||||| |||||||||||| ||||||| | ||||||    
T  36756280 gcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacac 36756338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 249
Target Start/End: Complemental strand, 20473383 - 20473350
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattat 249  Q
    ||||||| ||||||||||||||||||||||||||    
T  20473383 tccgacatcgacacttgtaattacactgaattat 20473350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 43585984 - 43586037
Alignment:
Q  197 gtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| ||||||| | || |||||||||||||||||| |||||| |||||||||    
T  43585984 gtgtctgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatg 43586037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 974806 - 974778
Alignment:
Q  218 cgacaccgacacttgtaattacactgaat 246  Q
    |||||||||||||||||||||||||||||    
T  974806 cgacaccgacacttgtaattacactgaat 974778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 12668423 - 12668455
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| ||||||||||||||||||    
T  12668423 cgacaccgacacttataattacactgaattatg 12668455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 15657923 - 15657891
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||| |||||||||||||||||||||    
T  15657923 cgacaccgacatttgtaattacactgaattatg 15657891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 23058442 - 23058474
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||| ||||||    
T  23058442 cgacaccgacacttgtaattacactggattatg 23058474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 30717530 - 30717562
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| |||||||||||||||||||||||||||    
T  30717530 cgacatcgacacttgtaattacactgaattatg 30717562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 31808176 - 31808104
Alignment:
Q  178 ttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||| | ||||||| ||| |||| || | | |||| ||||| | ||||||||||||||||||    
T  31808176 ttggattaggtgtgtccaggtgtcgaacatgtgtcgtgttcaacactgacacatataattacactgaattatg 31808104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 33153483 - 33153451
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||| ||||||||||||||||||||||||||    
T  33153483 cgacacggacacttgtaattacactgaattatg 33153451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 33884110 - 33884082
Alignment:
Q  218 cgacaccgacacttgtaattacactgaat 246  Q
    |||||||||||||||||||||||||||||    
T  33884110 cgacaccgacacttgtaattacactgaat 33884082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 36756344 - 36756376
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| ||||||||||||||||||    
T  36756344 cgacaccgacacttataattacactgaattatg 36756376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 44860443 - 44860379
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||||| | ||||||||||| ||| |||||||||| ||| || ||| ||||| ||||    
T  44860443 gcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacac 44860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 4e-29; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 34595246 - 34595161
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| ||||||||||||| |||||||| ||||||||| || |||||||||||||||||||||||||||||||||||    
T  34595246 gcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatg 34595161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 28152210 - 28152125
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| |||||||| ||||||||  ||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  28152210 gcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatg 28152125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 32978846 - 32978931
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||  |||| ||||||||||||| |||| || ||||||||||||||||||||||||||| |||||||    
T  32978846 gcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatg 32978931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 7977777 - 7977862
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| ||||||||| ||||||| ||||| || |||||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  7977777 gcacgaacactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatg 7977862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 28715407 - 28715322
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| ||||| || | |||||| |||| ||||||||| |||||||| || |||||||||||||||||||||||||||||||||||    
T  28715407 gcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatg 28715322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 4878054 - 4877970
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| |||| || |||||||||| |||| || ||||||||||||||||||||||| ||| |||||||    
T  4878054 gcacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatg 4877970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 7265540 - 7265625
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||| ||||| ||||||||  | ||||||||||||||| || |||| |||||||||||||| | ||||||||||||||||||    
T  7265540 gcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatg 7265625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 17841536 - 17841621
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| ||||  | ||||||||||| ||| || |||||||||| |||||||||||||||| |||||||    
T  17841536 gcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatg 17841621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 8776915 - 8777002
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaatt 247  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||| || ||     ||||||| ||||||||||||||||||||||    
T  8776915 gcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtcgtgtccgacaccaacacttgtaattacactgaatt 8777002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 9658992 - 9658906
Alignment:
Q  165 gcacggacactccttgga-ttaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||||| || ||  |||||||||  | ||||||||||||||||||    
T  9658992 gcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatg 9658906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 12696441 - 12696351
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaattatg 250  Q
    |||| |||||||||||||| |||||||| |||||||| ||||||||| || ||     |||||| ||||||||||||||||||||||||||    
T  12696441 gcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatg 12696351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 6898228 - 6898313
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| |||||| | |||||||| ||||| |||||| |||||||  | || ||||||||||||||||||||||||||| |||||||    
T  6898228 gcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacacttaattatg 6898313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 32511613 - 32511698
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||  ||||||| ||| |||| |||| ||||  ||| |||||||||||| |||||| ||||||||||||||||||    
T  32511613 gcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatg 32511698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 250
Target Start/End: Original strand, 853811 - 853891
Alignment:
Q  170 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||| |||||||||| ||||  |  |||||||||| ||| ||||||||||||||||||||||||| |||| |||||||    
T  853811 gacactcattggattaggcgtgtctctatgtcggacacatgtcgtatccgacaccgacacttgtaattgcacttaattatg 853891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 9107306 - 9107370
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||  ||||| ||||||||||||||    
T  9107306 gcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacac 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 16766820 - 16766756
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||| || | |||||||| |||| ||||||||||||||||||||| ||||||||||||||    
T  16766820 gcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 16833415 - 16833335
Alignment:
Q  170 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||| ||||| ||||||| | |||||||||| ||||| || ||  |||||||||||||||||||||||||| ||||    
T  16833415 gacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatg 16833335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 8389415 - 8389478
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggaca-cgtgttgtatccgacaccgaca 228  Q
    |||||||||||||| ||||||||||||| ||||||||||||| |||||||  |||||||||||||    
T  8389415 gcacggacactcctcggattaggtgtgtcccggtgtcggacaccgtgttg-gtccgacaccgaca 8389478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 17302679 - 17302631
Alignment:
Q  166 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgt 214  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||||    
T  17302679 cacggacattctttggattaggtgtgttccgatgtcggacacgtgttgt 17302631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 31385042 - 31384947
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc----------cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||| |||| ||||||| |||||||||| || ||          |||||| ||||||||||||||||||||||||||    
T  31385042 gcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacactacacgacactgacacttgtaattacactgaattatg 31384947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 33001242 - 33001321
Alignment:
Q  171 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||| |||||||||| || || ||||||| ||||||||| || |||||||||||||| | |||||||| | |||||||    
T  33001242 acactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatg 33001321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 1191660 - 1191729
Alignment:
Q  175 tccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 247  Q
    |||| |||||||||||||   ||||||||||||| || || ||| ||| ||||||||||||||||||||||||    
T  1191660 tcctcggattaggtgtgt---ggtgtcggacacgcgtcgtgtccaacatcgacacttgtaattacactgaatt 1191729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 24645562 - 24645508
Alignment:
Q  196 ggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||| || || ||||||||||||||||| || |||||||||||    
T  24645562 ggtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatg 24645508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 31959262 - 31959220
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacac 207  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  31959262 gcacggacactcctcggattaggtgtgtcccggtgtcggacac 31959220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 249
Target Start/End: Original strand, 16388215 - 16388248
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattat 249  Q
    ||||||||||||||||||||||||||||||||||    
T  16388215 tccgacaccgacacttgtaattacactgaattat 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 5970151 - 5970207
Alignment:
Q  263 aaattattagctgtgtcggcgtgttcgtgttgtgtccggtatccgtgtccgtatctg 319  Q
    ||||||||| |||||||| ||||| |||||  |||||||| ||||||||||||||||    
T  5970151 aaattattaactgtgtcgacgtgtccgtgtcatgtccggtgtccgtgtccgtatctg 5970207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 7248481 - 7248417
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||||| ||||| |  |||| |||||||||||||| |||||| ||| ||||||||||    
T  7248481 gcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacac 7248417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 8365455 - 8365519
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||| |||||| |||||||| |||| || ||||||||||||||| || ||||| ||||||||    
T  8365455 gcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 9911528 - 9911560
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||    
T  9911528 cgacaccgacacttgtaattacactgaattatg 9911560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 10339061 - 10339125
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||||||  ||||||| |||| || |||||||||| |||| || ||||||||||||||    
T  10339061 gcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 10770674 - 10770706
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatg 10770706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 23771658 - 23771610
Alignment:
Q  197 gtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaa 245  Q
    ||||||||||| ||| || ||||||||||||| ||||||||||||||||    
T  23771658 gtgtcggacacatgtcgtgtccgacaccgacatttgtaattacactgaa 23771610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 26247542 - 26247479
Alignment:
Q  166 cacggacactccttggattaggtgtgttccggtgtcggacacgtgtt-gtatccgacaccgacac 229  Q
    |||||||||||||  ||||||||||||| ||||||| |||||||||| || ||||||||||||||    
T  26247542 cacggacactcctcagattaggtgtgtt-cggtgtcagacacgtgttggtgtccgacaccgacac 26247479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 208
Target Start/End: Complemental strand, 7625228 - 7625185
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacg 208  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||    
T  7625228 gcacgaacactccttggattaagcgtgttccggtgtcggacacg 7625185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 9523001 - 9522950
Alignment:
Q  178 ttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||| ||||  ||||||||||||||||| | |||||||||||||||    
T  9523001 ttggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacac 9522950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 1316039 - 1315969
Alignment:
Q  170 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattaca 240  Q
    |||||| || || ||||| |||||| |||||||||||| ||  ||  ||||||||||||||||||||||||    
T  1316039 gacacttctcgggttaggcgtgttctggtgtcggacacatgacgtgcccgacaccgacacttgtaattaca 1315969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 2545555 - 2545509
Alignment:
Q  167 acggacactccttggattaggtgtgttccggtgtcggacacgtgttg 213  Q
    |||||||||| |||||||||||||| ||||||||| ||||| |||||    
T  2545555 acggacactcattggattaggtgtgctccggtgtcagacacatgttg 2545509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 250
Target Start/End: Complemental strand, 9522948 - 9522918
Alignment:
Q  220 acaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||    
T  9522948 acaccgacacttgtaattacactgaattatg 9522918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 10827493 - 10827555
Alignment:
Q  167 acggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||| ||  ||||||| || ||||| ||||||||||||||||| |||||||| |||||    
T  10827493 acggacacttctatgattaggcgtattccgatgtcggacacgtgttgtgtccgacacagacac 10827555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 250
Target Start/End: Original strand, 12627539 - 12627609
Alignment:
Q  180 ggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||| ||||  |||||||||||| |||| || ||||||| |||||| | | ||||||||||||||||    
T  12627539 ggattaggagtgtctcggtgtcggacatgtgtggtgtccgacatcgacacatattattacactgaattatg 12627609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 12868718 - 12868772
Alignment:
Q  263 aaattattagctgtgtcggcgtgttcgtgttgtgtccggtatccgtgtccgtatc 317  Q
    ||||||||| ||||||||||||||  |||| ||||||||| |||| |||||||||    
T  12868718 aaattattaactgtgtcggcgtgtcagtgtcgtgtccggtgtccgagtccgtatc 12868772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 17327597 - 17327655
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac 223  Q
    |||||||||||||| |||||||| |||| || ||||| ||||||||| || ||||||||    
T  17327597 gcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacac 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 21395262 - 21395340
Alignment:
Q  167 acggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||| |||| | |||||| |||||    || |  ||||||||||||||||||||||||| |||||||    
T  21395262 acggacactccttggattaggcgtgtcctggtgtccgacac----tg-acacgacaccgacacttgtaattacactaaattatg 21395340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 26402678 - 26402712
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||| ||||||||||||||||    
T  26402678 tccgacaccgacacttgtgattacactgaattatg 26402712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 7378091 - 7378006
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||| ||  ||||||  |||| |||||||||||  | ||| || |||||||||||||| | |||||||| |||||||||    
T  7378091 gcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatg 7378006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 7801155 - 7801188
Alignment:
Q  217 ccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||| ||||||||||    
T  7801155 ccgacaccgacacttgtaattacgctgaattatg 7801188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 247
Target Start/End: Original strand, 9107370 - 9107399
Alignment:
Q  218 cgacaccgacacttgtaattacactgaatt 247  Q
    ||||||||||||||||||||||||||||||    
T  9107370 cgacaccgacacttgtaattacactgaatt 9107399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 13360320 - 13360404
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||| | |||||||| ||||  | ||||||||||  |||||| || |||||||| || | ||||||||||||||||||    
T  13360320 gcacggacactcttcggattaggcgtgtctcagtgtcggacat-tgttgtgtctgacaccgaaacatataattacactgaattatg 13360404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 6327513 - 6327549
Alignment:
Q  213 gtatccgacaccgacacttgtaattacactgaattat 249  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  6327513 gtatccgacatcgacacttgtaattacacttaattat 6327549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 8365519 - 8365551
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||| ||||||||    
T  8365519 cgacaccgacacttgtaattacaccgaattatg 8365551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 18367959 - 18367895
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||||||||||| ||| |||| || ||||| |||| |||| || || |||||||||||    
T  18367959 gcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacac 18367895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 34446683 - 34446647
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtc 201  Q
    |||||||||||||||||||||||||||| || |||||    
T  34446683 gcacggacactccttggattaggtgtgtcccagtgtc 34446647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 21191003 - 21191088
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| |||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21191003 gcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatg 21191088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 21576692 - 21576777
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| |||| || ||||| ||||||||| || ||||||| |||||||||||||||||||||||||||    
T  21576692 gcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatg 21576777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 30098985 - 30099070
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| ||||||||||||| ||| |||| || ||||| ||||||||| ||||||||||||||||| | ||||||||| ||||||||    
T  30098985 gcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacacatataattacacagaattatg 30099070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 42893468 - 42893387
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||   |||||| |||| | ||||||||||||||||||| || ||||||||||||||||||||||||| ||||||    
T  42893468 ggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatg 42893387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 43564993 - 43564908
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||| || |||||||| |||| |||| ||||||||| ||| || |||||||||||||||| |||||||||| |||||||    
T  43564993 gcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatg 43564908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 21522875 - 21522809
Alignment:
Q  163 atgcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||||| |||||||||| |||| |||||| ||||||||||| || ||||||||||||||    
T  21522875 atgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 21533441 - 21533375
Alignment:
Q  163 atgcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||||| |||||||||| |||| |||||| ||||||||||| || ||||||||||||||    
T  21533441 atgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 21542155 - 21542089
Alignment:
Q  163 atgcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||| |||||||||| || |||| |||||||||||||||||| || ||||||||||||||    
T  21542155 atgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 30502335 - 30502418
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatta 248  Q
    ||||| ||| |||||||||||||  ||| || |||||||||| |||| || |||||||||||||| | ||||||||||||||||    
T  30502335 gcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaatta 30502418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 30542678 - 30542761
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatta 248  Q
    ||||| ||| |||||||||||||  ||| || |||||||||| |||| || |||||||||||||| | ||||||||||||||||    
T  30542678 gcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaatta 30542761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 26312875 - 26312798
Alignment:
Q  171 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatta 248  Q
    |||||||| ||||||||||||| | |||||| ||||||| | || ||||||||||| || | ||||||||||||||||    
T  26312875 acactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatacatataattacactgaatta 26312798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 31084439 - 31084350
Alignment:
Q  166 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac-----cgacacttgtaattacactgaattatg 250  Q
    ||||||||||||| ||||||||  ||| || ||||||||||||||| || ||||||||     ||||||||||||||||| |||||||||    
T  31084439 cacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatg 31084350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 27932341 - 27932262
Alignment:
Q  171 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||| | |||||| |||| | |||||| ||||||||| || ||||||||| | | |||||||||||||||||||||    
T  27932341 acactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatg 27932262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 249
Target Start/End: Original strand, 32630687 - 32630766
Alignment:
Q  170 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 249  Q
    ||||||||| | |||||||||||  |  |||||||||||||| ||||||||||| ||||| | |||||||| ||||||||    
T  32630687 gacactcctcgaattaggtgtgtctcaatgtcggacacgtgtcgtatccgacactgacacatataattacattgaattat 32630766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 6247683 - 6247649
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||||    
T  6247683 tccgacaccgacacttgtaattacactgaattatg 6247649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 14873634 - 14873544
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatcc-----gacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| |||| ||||||| ||||||||||||  |||     ||||||||||| | |||||||||| |||||||    
T  14873634 gcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgacatgacaccgacacatataattacactaaattatg 14873544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 15382592 - 15382507
Alignment:
Q  170 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtat------ccgacaccgacacttgtaattacactgaattat 249  Q
    ||||||||| |||||||| |||| ||||||||||||| |||| || |      |||||||||||||||||||||| ||||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacaccgacacttgtaattatactgaattat 15382507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 15884049 - 15884015
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||||    
T  15884049 tccgacaccgacacttgtaattacactgaattatg 15884015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 43001917 - 43001827
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac-----cgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| |||| | |||||  ||||||||| || ||||||||     | |||||||||||||||||||||||||    
T  43001917 gcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacacatcaccaacacttgtaattacactgaattatg 43001827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 17088402 - 17088358
Alignment:
Q  166 cacggacactccttggattaggtgtgttccggtgtcggacacgtg 210  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggacacgtg 17088358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 39268545 - 39268609
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||||| |||||||| |||| || ||||||||||| ||| || ||| ||||||||||    
T  39268545 gcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacac 39268609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 39698664 - 39698600
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||||| |||||||| ||||  |||||||||| || ||| || ||||||||||||||    
T  39698664 gcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacac 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 250
Target Start/End: Original strand, 21351906 - 21351937
Alignment:
Q  219 gacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||||||||||    
T  21351906 gacaccgacacttgtaattacactgaattatg 21351937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 8420088 - 8420054
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||| |||||||||    
T  8420088 tccgacaccgacacttgtaattacattgaattatg 8420054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 24906299 - 24906333
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| |||||||||||||||||||||||||||||    
T  24906299 tccgataccgacacttgtaattacactgaattatg 24906333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 30098449 - 30098391
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac 223  Q
    ||||||||| |||| ||||||||||||| | |||||| ||||||||| || ||||||||    
T  30098449 gcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacac 30098391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 33178086 - 33178052
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||||| |||||||    
T  33178086 tccgacaccgacacttgtaattacactaaattatg 33178052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 4105371 - 4105286
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| |||| || || || ||||| | | |  || || ||| |||||||||||||||||||||||||    
T  4105371 gcacggacactcctcggattaggcgtgtcccagtatcagacacatatcgagtctgatacctacacttgtaattacactgaattatg 4105286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 21194070 - 21194151
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaat 246  Q
    |||||||||||||| |||||||| |||  |||||||| |||| |||| || ||| ||||| | || | ||||||||||||||    
T  21194070 gcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaat 21194151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 28588625 - 28588706
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||| | |||||| | |||| | |||||| || | |||| || |||||||||||||| | ||||||||||||||||||    
T  28588625 ggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatg 28588706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 38464320 - 38464361
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggaca 206  Q
    |||| ||||||||| ||||||||||||| |||||||||||||    
T  38464320 gcacagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 6401621 - 6401557
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||||||||||| ||| || | || ||||| ||||||||| || |||||||| |||||    
T  6401621 gcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacac 6401557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 250
Target Start/End: Original strand, 7218271 - 7218299
Alignment:
Q  222 accgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||    
T  7218271 accgacacttgtaattacactgaattatg 7218299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 13287399 - 13287431
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||| |||||||||||||||    
T  13287399 cgacaccgacacttgtagttacactgaattatg 13287431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 18592196 - 18592132
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||| | | |||||  |||| ||| |||| |||||||||||| ||||||||||||||    
T  18592196 gcacggacactcatcgaattagccgtgtcccgatgtcagacacgtgttgtgtccgacaccgacac 18592132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 31084339 - 31084291
Alignment:
Q  263 aaattattagctgtgtcggcgtgttcgtgttgtgtccggtatccgtgtc 311  Q
    ||||||||||||||||||||||||  |||| ||||||||| ||| ||||    
T  31084339 aaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccatgtc 31084291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 39698600 - 39698568
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||| ||||||||||||||||||||||||||    
T  39698600 cgacactgacacttgtaattacactgaattatg 39698568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 41633794 - 41633762
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||| |||||||||||||||||||||    
T  41633794 cgacaccgacatttgtaattacactgaattatg 41633762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 409 - 491
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 247  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  409 gcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaatt 491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 9e-27; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 23292933 - 23293018
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| |||| |||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  23292933 gcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatg 23293018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 21945610 - 21945530
Alignment:
Q  170 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||| |||||||| ||||| |||||||||||| ||||  | |||||||||||||||||||||||||||||||||||    
T  21945610 gacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatg 21945530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 35161148 - 35161063
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||  | |||||||||||||||||||||||||||||||| || |||||| | || |||| ||||||||||||||||||    
T  35161148 gcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgactctgatacttataattacactgaattatg 35161063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 38846975 - 38847040
Alignment:
Q  181 gattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaat 246  Q
    |||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  38846975 gattaggtatgttctggtgtcggacacgtgtcgtatccgacactgacacttgtaattacactgaat 38847040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 49431134 - 49431053
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||| |||| ||| |||| ||||||| |||||||||| || |||||||||||||||| ||||||||||||||||||    
T  49431134 ggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatg 49431053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 3947708 - 3947798
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| ||||||||||||| | |||||||||||||||| || ||     |||||| ||||||||||||||||||||||||||    
T  3947708 gcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatg 3947798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 28964199 - 28964280
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||| |||||||| |||| || |||||||| | |||| || |||||||| ||||||||||||||||||||||||||    
T  28964199 ggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatg 28964280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 317
Target Start/End: Complemental strand, 42640636 - 42640488
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg-nnnnnnnnnnnna 263  Q
    ||||||| |||||| |||||||| |||| | |||| |||||||||||     ||||||||||||||||||||||||||||||||||             |    
T  42640636 gcacggaaactcctcggattaggcgtgtcctggtgccggacacgtgt-----ccgacaccgacacttgtaattacactgaattatgtgatttttttttca 42640542  T
Q  264 aattattagctgtgtcggcgtgttcgtgttgtgtccggtatccgtgtccgtatc 317  Q
    |||||| |||||||||||||||| ||||||||||||  | ||||||||||||||    
T  42640541 aattatcagctgtgtcggcgtgtccgtgttgtgtccaatgtccgtgtccgtatc 42640488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 2361922 - 2362007
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||| |  ||||||||||||  ||||||| |||||| || || |||||||||||||||| |||||||||| |||||||    
T  2361922 gcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatg 2362007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 4157261 - 4157176
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||| ||||||||| | ||||||||| |  |||||||||||| |||| || |||||||||||||||||||||| |||| |||||||    
T  4157261 gcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatg 4157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 4672032 - 4672117
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||| |||||||||||||||||   |||||| |||||| |||||| ||||||||||||||||||| | ||  ||||||||||||||    
T  4672032 gcacagacactccttggattagacatgttccagtgtcgaacacgttttgtatccgacaccgacacatatagctacactgaattatg 4672117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 8423665 - 8423750
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||| ||  ||||||| |||| |||||||||||||  ||| || ||||||||||||| || ||||||||||||||||||    
T  8423665 gcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatg 8423750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 16073502 - 16073421
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||| |||||||| ||||    |||||||||| || | || |||||||||||||||||||||||||||||||||||    
T  16073502 ggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatg 16073421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 29205532 - 29205471
Alignment:
Q  189 gtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||| ||||||||||||| |||| || ||| |||||||||||||||||||||||||||||||    
T  29205532 gtgtcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatg 29205471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 34306767 - 34306828
Alignment:
Q  181 gattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacact 242  Q
    ||||||| ||||  ||||||||||||||||| || |||||||||||||||||||||||||||    
T  34306767 gattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacact 34306828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 35157932 - 35158017
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||| || |||||| | |||||||||||| ||||| |||| || || ||||||||||||| |||||||||| |||||||    
T  35157932 gcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatg 35158017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 715552 - 715639
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatcc--gacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| |||| || |||||||||| |||| || | |  |||||| |||||||||||||||||||||||||    
T  715552 gcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatg 715639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 752878 - 752965
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatcc--gacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| |||| || |||||||||| |||| || | |  |||||| |||||||||||||||||||||||||    
T  752878 gcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatg 752965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 30982814 - 30982878
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||| |||||||||| |||| |||||||||||||||||| || || |||||||||||    
T  30982814 gcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 9996936 - 9996867
Alignment:
Q  181 gattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||| |||||||||||||||| | || |||||||| || | |||||| |||||||||||    
T  9996936 gattaggtgtgttccagtgtcggacacgtgttatgtctgacaccgagacatataattatactgaattatg 9996867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 12797285 - 12797370
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| ||| |||| |||||||   ||| |||||||| |||| || | || |||||||||||||||||||||||||||||||||||    
T  12797285 gcacgaacattcctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatg 12797370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 12895221 - 12895306
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| |||||||| |||||||| |||| ||| ||||||| || ||| || |||||||||||||||| |||||||||  |||||||    
T  12895221 gcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatg 12895306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 54580006 - 54580055
Alignment:
Q  201 cggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  54580006 cggacacgtgtcgtgtccgacaccgacacttataattacactgaattatg 54580055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 4157543 - 4157463
Alignment:
Q  170 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||| | |||||| || |  |||||||||||| |||| || |||||||||||||||||||||| |||| |||||||    
T  4157543 gacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatg 4157463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 5414108 - 5414172
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||||||||||| |||||||| || ||||| ||||||||| || |||||||| |||||    
T  5414108 gcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacac 5414172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 40481743 - 40481663
Alignment:
Q  175 tccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccg-----acacttgtaattacactgaattatg 250  Q
    |||| |||||| ||||||| ||||||||||||||||| || ||| ||||||     |||||||||||||||||||||||||    
T  40481743 tcctcggattaagtgtgtttcggtgtcggacacgtgtcgtgtccaacaccgacataacacttgtaattacactgaattatg 40481663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 848073 - 848015
Alignment:
Q  166 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacacc 224  Q
    ||||||||||||||||||||||||||| |||||||  ||||||| | || |||||||||    
T  848073 cacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacacc 848015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 20743213 - 20743259
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgt 211  Q
    |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  20743213 gcacggacactcatcggattagatgtgttccggtgtcggacacgtgt 20743259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 53381537 - 53381602
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgt-tgtatccgacaccgacac 229  Q
    |||||||||||||| ||||||||||||| ||||||||||| ||| ||  || ||||||||||||||    
T  53381537 gcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacac 53381602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 15724498 - 15724554
Alignment:
Q  173 actccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||| |||||||| |||||  |||||| |||||||||||| ||||||||||||||    
T  15724498 actcctcggattaggcgtgttttggtgtctgacacgtgttgtgtccgacaccgacac 15724554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 19482791 - 19482727
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||| |||||||| ||||||||||||| || ||||||||||||||| || ||| | ||||||||    
T  19482791 gcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacac 19482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 28084636 - 28084549
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgt--tgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| |||| || |||||||||||||||     |  |||||| |||||||||||||||| |||||||||    
T  28084636 gcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcaccgacacgacacagacacttgtaattacattgaattatg 28084549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 30299006 - 30298974
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||    
T  30299006 cgacaccgacacttgtaattacactgaattatg 30298974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 30327874 - 30327842
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||    
T  30327874 cgacaccgacacttgtaattacactgaattatg 30327842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 7251670 - 7251721
Alignment:
Q  263 aaattattagctgtgtcggcgtgttcgtgttgtgtccggtatccgtgtccgt 314  Q
    |||||||||||||||||||||| |  |||||||||||||| ||||| |||||    
T  7251670 aaattattagctgtgtcggcgtttctgtgttgtgtccggtgtccgtatccgt 7251721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 6879463 - 6879497
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||||| |||||||    
T  6879463 tccgacaccgacacttgtaattacacttaattatg 6879497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 18966621 - 18966567
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccg 219  Q
    ||||||||||||||| ||||||| || | ||| ||||||||||||||||| ||||    
T  18966621 gcacggacactccttagattaggcgtatcccgttgtcggacacgtgttgtgtccg 18966567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 249
Target Start/End: Original strand, 28000743 - 28000773
Alignment:
Q  219 gacaccgacacttgtaattacactgaattat 249  Q
    |||||||||||||||||||||||||||||||    
T  28000743 gacaccgacacttgtaattacactgaattat 28000773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 482194 - 482270
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||| | |||||||  |||||| |||||| |||||||||     |||||||||||| || ||||||||||||||||||    
T  482194 ggacactcatcggattagacgtgttcaggtgtcagacacgtgt-----ccgacaccgacagttataattacactgaattatg 482270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 11931403 - 11931362
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggaca 206  Q
    ||||||||||||| |||||||||||||| | |||||||||||    
T  11931403 gcacggacactccatggattaggtgtgtcctggtgtcggaca 11931362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 12324032 - 12323967
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacact 230  Q
    |||||||||||||| |||| ||||||||||| ||| |  ||||||||  | |||||||||||||||    
T  12324032 gcacggacactcctcggataaggtgtgttcccgtgccacacacgtgtcatgtccgacaccgacact 12323967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 17876278 - 17876237
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggaca 206  Q
    |||| ||||||||||||||||||||||| | |||||||||||    
T  17876278 gcacagacactccttggattaggtgtgtcctggtgtcggaca 17876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 21873306 - 21873355
Alignment:
Q  162 tatgcacggacactccttggattaggtgtgttccggtgtcggacacgtgt 211  Q
    |||||||  ||||||||||||||||  |||| ||||||||||||||||||    
T  21873306 tatgcacaaacactccttggattagacgtgtcccggtgtcggacacgtgt 21873355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 21929167 - 21929216
Alignment:
Q  162 tatgcacggacactccttggattaggtgtgttccggtgtcggacacgtgt 211  Q
    |||||||  ||||||||||||||||  |||| ||||||||||||||||||    
T  21929167 tatgcacaaacactccttggattagacgtgtcccggtgtcggacacgtgt 21929216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 7424765 - 7424722
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttg 213  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||    
T  7424765 ggacactccttggattaggcgtg-tacggtgtcggacacgtgttg 7424722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 11596352 - 11596384
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||| |||||||||||||||||||||||||    
T  11596352 cgacacctacacttgtaattacactgaattatg 11596384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 22234826 - 22234890
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||| ||||| || ||||||| ||||| | |||||||||||||||| || || |||||||||||    
T  22234826 gcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacac 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 40784065 - 40784029
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtc 201  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  40784065 gcacggacactcctcggattaggtgtgtcccggtgtc 40784029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 18190061 - 18190140
Alignment:
Q  171 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||| ||||||||||||| ||||||||||||||||||||| || |||| |||||||||||||||||||||||||||    
T  18190061 acactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatg 18190140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 18337441 - 18337356
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||| |||  ||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18337441 gcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatg 18337356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 51410129 - 51410052
Alignment:
Q  173 actccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||| ||||  |||||||||| |||||| || |||||||||||||||||||||||||||||||||||    
T  51410129 actccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatg 51410052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 37598943 - 37598861
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 247  Q
    |||||||||||||| |||||||| |||| ||  |||||||||||||| || |||||||||||||||| |||||||||||||||    
T  37598943 gcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt 37598861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 42359396 - 42359478
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 247  Q
    |||||||||||||| |||||||| |||| ||||||||||||||  ||  | ||||||||||||||||||||||||||||||||    
T  42359396 gcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaatt 42359478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 22515834 - 22515919
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| ||||  |||||||||| | |||| || ||||||||||||||||||||||||||| |||||||    
T  22515834 gcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatg 22515919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 40258884 - 40258965
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||| |||||||| |||| | ||||||||||| |||| || || ||||||||||||||||||||||||||||||||    
T  40258884 ggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatg 40258965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 1815368 - 1815284
Alignment:
Q  166 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| |||||||  ||||||| |||| ||||||||||||| |||| || || ||||||||||||||||||||||||||||||||    
T  1815368 cacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatg 1815284  T

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Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 46348330 - 46348414
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 249  Q
    |||||||||| ||| |||| ||| ||||  ||||||||||||||||| || ||||||||||||||||||||||||||| ||||||    
T  46348330 gcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattat 46348414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 40181976 - 40181898
Alignment:
Q  172 cactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||| |||||||| |||| ||||||| ||||||||||||| ||||||||||| || | ||||||||||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatg 40181898  T

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Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 19562567 - 19562626
Alignment:
Q  170 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||||||||| |||||    
T  19562567 gacactcctcggattaggtgtgtccctgtgtcggacacgtgttgtatccgacactgacac 19562626  T

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Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 1486651 - 1486741
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaattatg 250  Q
    |||| ||||||||| |||||||| |||| |||||||||||||||||| || ||     |||||||||||||| ||||||||||||||||||    
T  1486651 gcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatg 1486741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 5898213 - 5898298
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||  |||| ||||||| |||||||||| || || ||||||||| | | ||||||||||||||||||    
T  5898213 gcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatg 5898298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 317
Target Start/End: Original strand, 38078616 - 38078759
Alignment:
Q  173 actccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgnnnnnnnnnnnnaaattattag 272  Q
    |||||| |||||||| |||| | ||||| | ||| |||| || ||||||||||||||||||||||||| |||||||||            ||||||||||    
T  38078616 actcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatg--tgattttttcaaattattag 38078713  T
Q  273 ctgtgtcggcgtgttcgtgtt-gtgtccggtatccgtgtccgtatc 317  Q
    |||||||| |||||  ||||| ||||||||| ||||||||||||||    
T  38078714 ctgtgtcgacgtgtcagtgttcgtgtccggtgtccgtgtccgtatc 38078759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 18471405 - 18471327
Alignment:
Q  167 acggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||| | |||||||||||| ||||||||||||||||| || |     ||||||||||||||||| |||||||||||    
T  18471405 acggacactcctcgaattaggtgtgtttcggtgtcggacacgtgtcgtgt-----accgacacttgtaattatactgaattatg 18471327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 1704946 - 1705024
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||| ||||  |||||||||||||  |||| |  |||||||||||||||||||||| ||||||||||    
T  1704946 ggacactccttggattaggcgtgtctcggtgtcggacac--gttg-acacgacaccgacacttgtaattaccctgaattatg 1705024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 31694646 - 31694710
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||||||  ||||||| |||||||||||||| | | ||||||| ||||||||||||||    
T  31694646 gcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacac 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 32461400 - 32461464
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||| ||||||||||| |||| || ||||| ||||||||| || ||||||||||||||    
T  32461400 gcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac 32461464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 40917872 - 40917808
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||| |||| |||||||| |||| |||||||||||||||||| || ||| ||||||||||    
T  40917872 gcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 19058854 - 19058888
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||||    
T  19058854 tccgacaccgacacttgtaattacactgaattatg 19058888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 24334703 - 24334737
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||||    
T  24334703 tccgacaccgacacttgtaattacactgaattatg 24334737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 2896072 - 2896153
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||| |||||||||||||||| ||||| |||||||| ||| || || ||||||||||  | ||  ||||||||||||||    
T  2896072 ggacacttcttggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacatatatagctacactgaattatg 2896153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 15323275 - 15323234
Alignment:
Q  170 gacactccttggattaggtgtgttccggtgtcggacacgtgt 211  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  15323275 gacactcctcggattaggtgtgtttcggtgtcggacacgtgt 15323234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 21378642 - 21378605
Alignment:
Q  213 gtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||| |||||||||||||||||||||||||||||||    
T  21378642 gtatccaacaccgacacttgtaattacactgaattatg 21378605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 6612171 - 6612203
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||    
T  6612171 cgacaccgacacttgtaattacactgaattatg 6612203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 9828167 - 9828103
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||||| |||||||  |||| |||||||||||||||||| || || ||||| |||||    
T  9828167 gcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacac 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 24577186 - 24577218
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||    
T  24577186 cgacaccgacacttgtaattacactgaattatg 24577218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 25934739 - 25934675
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||||||||||| ||| || | || ||||| ||||||||| || ||||||||||||||    
T  25934739 gcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacac 25934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 39130718 - 39130798
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 249  Q
    |||||||| |||||||| | |||| ||  |||||  |||||||||| |||||||||||||| | |||||||||| ||||||    
T  39130718 ggacactctttggattaagcgtgtcccaatgtcgagcacgtgttgtgtccgacaccgacacatataattacactaaattat 39130798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 43492456 - 43492524
Alignment:
Q  180 ggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatta 248  Q
    |||||||| |||| ||||||||||||| ||||||| || |||||||||||   ||||||||| ||||||    
T  43492456 ggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaatta 43492524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 47989556 - 47989524
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||    
T  47989556 cgacaccgacacttgtaattacactgaattatg 47989524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 47989620 - 47989556
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||||| |||||||| |||| ||| |||| |||| |||| || ||||||||||||||    
T  47989620 gcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 16297228 - 16297312
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacacc---gacacttgtaattacactgaatt 247  Q
    |||||||||||||| |||||||| |||| | ||||||||||||  || || |||||||||   |||| ||||||||||||||||||    
T  16297228 gcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacaccccggaca-ttgtaattacactgaatt 16297312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 46940755 - 46940798
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacg 208  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||    
T  46940755 gcacgaacactcctcggattaggcgtgttccggtgtcggacacg 46940798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 10577682 - 10577760
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactg 243  Q
    ||||||||||||||||||| ||| |||| || ||||| |||||| || || |||| | ||||||| | |||||||||||    
T  10577682 gcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccgcccccgacacatataattacactg 10577760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 22881614 - 22881707
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatgnnnnnnnnnnnnaaattattagctgtgtcggcgtgttcgtgttgtgtccggtatccgtgtc 311  Q
    ||||||||||||||||||||||||||| |||||||            |||||||||| |||||||||||||  |||| ||||||||| ||||||||    
T  22881614 tccgacaccgacacttgtaattacactaaattatgtgattttttc--aaattattagttgtgtcggcgtgtcagtgtcgtgtccggtgtccgtgtc 22881707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 249
Target Start/End: Original strand, 28273089 - 28273119
Alignment:
Q  219 gacaccgacacttgtaattacactgaattat 249  Q
    |||||||||||||||||||||||||||||||    
T  28273089 gacaccgacacttgtaattacactgaattat 28273119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 207
Target Start/End: Original strand, 29144327 - 29144369
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacac 207  Q
    |||||||||||| | |||||||| |||||||||||||||||||    
T  29144327 gcacggacactcttcggattaggcgtgttccggtgtcggacac 29144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 41877468 - 41877502
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||||| |||||||    
T  41877468 tccgacaccgacacttgtaattacactaaattatg 41877502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 26830699 - 26830615
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||  ||||||| |||| ||||| ||| |||||||| || || |||| |||||||| |||||||| | |||||||    
T  26830699 gcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgtctgaca-cgacacttataattacatttaattatg 26830615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 113358 - 113326
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||| |||||||||||||||||||||||||    
T  113358 cgacacctacacttgtaattacactgaattatg 113326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 2218298 - 2218266
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||| |||||||    
T  2218298 cgacaccgacacttgtaattacactaaattatg 2218266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 5376500 - 5376532
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| ||||||||||||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatg 5376532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 5927287 - 5927371
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 249  Q
    ||||||||||||||  |||||||  |||| || |||||||||  |||  | |||||||| |||||||||||||||| | ||||||    
T  5927287 gcacggacactcctcagattaggcatgtttcgatgtcggacatttgtcatgtccgacactgacacttgtaattacattaaattat 5927371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 5944342 - 5944310
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| ||||||||||||||||||    
T  5944342 cgacaccgacacttataattacactgaattatg 5944310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 5944406 - 5944342
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||| |||||||| |||||||| || | ||||||||||||| ||||||| |||| || ||||||    
T  5944406 gcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacac 5944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 6332729 - 6332697
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||| |||||||||||||||||||||||    
T  6332729 cgacaccgatacttgtaattacactgaattatg 6332697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 6427587 - 6427531
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgac 221  Q
    |||||||||||| |  ||||||| |||| |||||||||||||||||| || ||||||    
T  6427587 gcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgac 6427531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 11605898 - 11605966
Alignment:
Q  181 gattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 249  Q
    ||||||||||||||||||||| |||| || |  |||| || ||| |||| ||||||| |||||||||||    
T  11605898 gattaggtgtgttccggtgtcagacatgtatcatatctgataccaacacatgtaatttcactgaattat 11605966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 30173762 - 30173794
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||||| |||||    
T  30173762 cgacaccgacacttgtaattacactgagttatg 30173794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 31672893 - 31672925
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaatta 248  Q
    ||||||||||| |||||||||||||||||||||    
T  31672893 tccgacaccgagacttgtaattacactgaatta 31672925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 31694710 - 31694742
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||| |||||||||||    
T  31694710 cgacaccgacacttgtaattatactgaattatg 31694742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 55401187 - 55401102
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| ||||  ||||||||||||||||| || ||||||||||||||||||||||||||| |||||||    
T  55401187 gcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatg 55401102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 163 - 250
Target Start/End: Original strand, 15999955 - 16000048
Alignment:
Q  163 atgcacggacactccttggattaggtgtgttccggtgtcggacacgtgt--tgta----tccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||  ||||    ||||||||||||||||||| |||||||||||||||    
T  15999955 atgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgtacgtgtccgacaccgacacttgtagttacactgaattatg 16000048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 20503577 - 20503492
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| |||| |||||||| |||| |||| || ||| |||||||||||||||||||||||||||||||    
T  20503577 gcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatg 20503492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 28918111 - 28918028
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatcc--gacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||| |||| || ||||||||||||||| || |||  ||||||||||||||||||||||||||||||||    
T  28918111 ggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatg 28918028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 249
Target Start/End: Complemental strand, 7171607 - 7171529
Alignment:
Q  171 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 249  Q
    ||||||||||||||||| ||||  ||||||||||||||||| || ||||||||| |||||||||||||||| |||||||    
T  7171607 acactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattat 7171529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 10955056 - 10954979
Alignment:
Q  173 actccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||| |||||||| |||| || ||||||||||||||| || |||||||||||||||||| ||||||||||||||||    
T  10955056 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatg 10954979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 40993286 - 40993367
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||| |||||||| |||| ||||||||||||| |||| || |||||||||||||| | ||||||||||||||||||    
T  40993286 ggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatg 40993367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 18427060 - 18426976
Alignment:
Q  166 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||  |||||||||||| |||||| ||||||||||| ||||||||||||||||  | ||||||||| ||||||||    
T  18427060 cacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacatatataattacaccgaattatg 18426976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 51206300 - 51206385
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||  || | |||||||||||| ||   ||| ||||||||||||||||||| |||||||||||||||    
T  51206300 gcacggacactccttggattagaggtatcccggtgtcggacgcgacatgtgtccgacaccgacacttgtatttacactgaattatg 51206385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 11252088 - 11252005
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||| ||||||||| |||||||| |||||||| || |||||||||||||| || |||||||||||   ||||||||||||||||||    
T  11252088 gcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacac--ataattacactgaattatg 11252005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 25775619 - 25775536
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| |||||||| |||||||| |||| | |||||||||||||   |||  ||||||||||||||||||||||||||||||||||    
T  25775619 gcacgaacactcctcggattaggcgtgtcctggtgtcggacacgacgtgt--ccgacaccgacacttgtaattacactgaattatg 25775536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 27505363 - 27505273
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| ||||||||  ||| |||||||||||||||||| || ||     ||||||||||||||||||||||||| |||||||    
T  27505363 gcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatg 27505273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 15796230 - 15796294
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||| |||||| |||||||||| |||||||||||| ||||||||||||| ||||||||| ||||    
T  15796230 gcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacac 15796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 4987229 - 4987291
Alignment:
Q  167 acggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||| |||||||| |||| |||||||||||||||||| || ||| ||||||||||    
T  4987229 acggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 4987291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 21479134 - 21479080
Alignment:
Q  263 aaattattagctgtgtcggcgtgttcgtgttgtgtccggtatccgtgtccgtatc 317  Q
    ||||||||||||||||||||||||  |||| ||||||||| ||||||||||||||    
T  21479134 aaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgtgtccgtatc 21479080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 3631796 - 3631711
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| ||| |||| |||| | ||||||||||| |||| || |||||||| | ||| | ||||||||||||||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacactggcacatataattacactgaattatg 3631711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 14209236 - 14209172
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||| |||||||||||||| | ||| ||||| |||||||| || ||||||||||||||    
T  14209236 gcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacac 14209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 13845472 - 13845550
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactg 243  Q
    ||||||||||||||||||| ||| ||||  | ||||| ||||||| | || |||||||||||||| | |||||||||||    
T  13845472 gcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataattacactg 13845550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 14747577 - 14747523
Alignment:
Q  263 aaattattagctgtgtcggcgtgttcgtgttgtgtccggtatccgtgtccgtatc 317  Q
    ||||||||||||||||||||||||  |||| ||||||||| ||||| ||||||||    
T  14747577 aaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgtatccgtatc 14747523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 25093582 - 25093532
Alignment:
Q  197 gtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 247  Q
    |||||||||| ||||||| |||||||||||||| | |||||||||||||||    
T  25093582 gtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaatt 25093532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 35223050 - 35222965
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||| | | |||| || ||||| |||||||||  | |||||||||||||| | |||||||| |||||||||    
T  35223050 gcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatg 35222965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 3865749 - 3865701
Alignment:
Q  202 ggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||| || || |||||||||||||||||||| |||||||||||    
T  3865749 ggacacgtgtcgtgtcagacaccgacacttgtaattatactgaattatg 3865701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 8789495 - 8789582
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggaca--cgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| ||||  ||||||| ||||   |||| || |||||||||||||| | ||||||||| ||||||||    
T  8789495 gcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatg 8789582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 41961586 - 41961650
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||| || |||||||| |||| || ||||||||||||||| || ||||| ||||||||    
T  41961586 gcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 55213085 - 55213021
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||| ||| ||||||||| | ||||  ||||||||||||||||||||  |||||||||||||    
T  55213085 gcacggatacttcttggattatgcgtgtctcggtgtcggacacgtgttgtgcccgacaccgacac 55213021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 8039324 - 8039265
Alignment:
Q  171 acactccttggattaggtgtgttccggtgtcggacacgtg-ttgtatccgacaccgacac 229  Q
    |||||||||||||||||||||| |||| |||||||||| | |||||| |||||| |||||    
T  8039324 acactccttggattaggtgtgtcccggagtcggacacgcgtttgtattcgacactgacac 8039265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 26492183 - 26492234
Alignment:
Q  196 ggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 247  Q
    |||||| |||| |||| || ||||||||||| ||||||||||||||||||||    
T  26492183 ggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaatt 26492234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 8587019 - 8587053
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||||| |||||||    
T  8587019 tccgacaccgacacttgtaattacacttaattatg 8587053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 8593198 - 8593164
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||| |||||||||||    
T  8593198 tccgacaccgacacttgtaattatactgaattatg 8593164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 14217015 - 14216957
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac 223  Q
    ||||||||||| || ||||||||||||| || |||||| |||||||| || ||||||||    
T  14217015 gcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14216957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 14223144 - 14223086
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac 223  Q
    ||||||||||| || ||||||||||||| || |||||| |||||||| || ||||||||    
T  14223144 gcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14223086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 249
Target Start/End: Original strand, 15505775 - 15505821
Alignment:
Q  203 gacacgtgttgtatccgacaccgacacttgtaattacactgaattat 249  Q
    |||| ||||||| ||||||||| |||||| |||||||||||||||||    
T  15505775 gacatgtgttgtgtccgacaccaacacttataattacactgaattat 15505821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 23657849 - 23657767
Alignment:
Q  167 acggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 249  Q
    |||||||||  | ||||||||||||| ||||| |||||||  |||  | ||||||||||| | || |||||||||||||||||    
T  23657849 acggacacttttcggattaggtgtgtcccggtatcggacaaatgtcatgtccgacaccgatatttataattacactgaattat 23657767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 24204988 - 24205073
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgt-tgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| | |||||| |||| | ||||||||||||| ||  || ||||||| |||||||| ||||||||||| ||||||    
T  24204988 gcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgaca-cgacacttataattacactgtattatg 24205073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 207
Target Start/End: Original strand, 34185059 - 34185101
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacac 207  Q
    |||||||||||||| |||||||| |||| ||||||||||||||    
T  34185059 gcacggacactcctcggattaggcgtgtcccggtgtcggacac 34185101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 249
Target Start/End: Complemental strand, 8383318 - 8383285
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattat 249  Q
    |||||||||||||||| |||||||||||||||||    
T  8383318 tccgacaccgacacttataattacactgaattat 8383285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 12100381 - 12100297
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgtt-gtatccgacaccgacacttgtaattacactgaattat 249  Q
    |||||| ||||||| ||| ||||||||| ||||||||||||||| ||| || || |||| |||||| | | |||||||||||||||    
T  12100381 gcacgggcactcctcggactaggtgtgtcccggtgtcggacacgcgttagtgtcagaca-cgacacctattattacactgaattat 12100297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 12704598 - 12704663
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgtt-gtatccgacaccgacac 229  Q
    |||||||||||||| |||||||  |||||| ||||||||||| | ||| || ||||||||||||||    
T  12704598 gcacggacactcctaggattagacgtgttctggtgtcggacatgcgttggtgtccgacaccgacac 12704663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 25074907 - 25074842
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgtt-gtatccgacaccgacac 229  Q
    ||||| |||||||| ||||||||||||| || |||||||||||| ||| || || |||||||||||    
T  25074907 gcacgaacactcctcggattaggtgtgtcccagtgtcggacacgcgttggtgtcagacaccgacac 25074842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 250
Target Start/End: Complemental strand, 26508166 - 26508137
Alignment:
Q  221 caccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||||||||    
T  26508166 caccgacacttgtaattacactgaattatg 26508137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 247
Target Start/End: Original strand, 34185123 - 34185152
Alignment:
Q  218 cgacaccgacacttgtaattacactgaatt 247  Q
    ||||||||||||||||||||||||||||||    
T  34185123 cgacaccgacacttgtaattacactgaatt 34185152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 37077482 - 37077441
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggaca 206  Q
    ||||||||| |||||||||||||||||| || ||||||||||    
T  37077482 gcacggacattccttggattaggtgtgtccccgtgtcggaca 37077441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 1509598 - 1509566
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||| |||||||    
T  1509598 cgacaccgacacttgtaattacactaaattatg 1509566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 4466547 - 4466631
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 249  Q
    |||||||||||||| | || ||  |||| || ||||||||||| | ||||||||||||||| ||| | ||  |||||||||||||    
T  4466547 gcacggacactcctcgaataagccgtgtcccagtgtcggacacatcttgtatccgacaccggcacatatagctacactgaattat 4466631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 4990967 - 4990999
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||| ||||||||||||||||||||||||||||    
T  4990967 cgacgccgacacttgtaattacactgaattatg 4990999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 28812574 - 28812542
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||| ||||||||||||||    
T  28812574 cgacaccgacacttgtaactacactgaattatg 28812542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 34910376 - 34910344
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||| ||||||||||||||||||||||    
T  34910376 cgacaccgactcttgtaattacactgaattatg 34910344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 40052424 - 40052380
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgt 209  Q
    ||||| |||||||| |||||||| |||| ||||||||||||||||    
T  40052424 gcacgaacactcctcggattaggcgtgtcccggtgtcggacacgt 40052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 49651786 - 49651818
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||| |||||||||    
T  49651786 cgacaccgacacttgtaattacagtgaattatg 49651818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 9778617 - 9778527
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||| ||     ||||||||||||||||||||| |||||||||||    
T  9778617 gcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattatg 9778527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 13770808 - 13770718
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac-----cgacacttgtaattacactgaattatg 250  Q
    |||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||     |||||||||||||||||||||||||||    
T  13770808 gcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatg 13770718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 21880264 - 21880179
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||| || |||||||| |||| | ||||||||||| |||| || |||||||||||||||||||||||||||||||||||    
T  21880264 gcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatg 21880179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 5409778 - 5409868
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| |||| |||||||||||||||||| || ||     |||||||||||||||||||| ||||||||||||    
T  5409778 gcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatg 5409868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 15680921 - 15680836
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| | |||||  ||||  ||||||||||||||||| || |||||||||||||||| |||||||||| |||||||    
T  15680921 gcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatg 15680836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 32287410 - 32287495
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| ||||||||||||| |||||||||||||| |||  | |||||||||||||| | || || ||||||||||||    
T  32287410 gcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatg 32287495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 21864920 - 21864836
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 249  Q
    |||| ||||||||| | |||||  |||| |||||||||||||||||| || ||||||| ||||||||||||||||||| ||||||    
T  21864920 gcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattat 21864836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 33994323 - 33994239
Alignment:
Q  166 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||| ||||||||||||||||| ||||  |||||| ||||| |||| || || ||||||||||||||||||| ||||||||||||    
T  33994323 cacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattatg 33994239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 24105784 - 24105709
Alignment:
Q  171 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaat 246  Q
    |||||||| || ||||| |||| |||||||||||||| ||||||  ||||| ||||||||||||||||||||||||    
T  24105784 acactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacacttgtaattacactgaat 24105709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 7197273 - 7197327
Alignment:
Q  194 ccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatta 248  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  7197273 ccggtgtcggacatgtgttgtgtccgacaccgacacttgtaattacattgaatta 7197327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 8234245 - 8234173
Alignment:
Q  178 ttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||| ||||  |||||||||||| |||| || |||||||||| ||||||||| ||||||||||||||    
T  8234245 ttggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatg 8234173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 598320 - 598245
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattaca 240  Q
    ||||||||||| || |||||||| |||| |||||||||||||||||| || || |||||||||||||  |||||||    
T  598320 gcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattaca 598245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 20549903 - 20549820
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatta 248  Q
    |||||| ||||||| |||||||| ||||  |  ||||||||| ||||||| |||||||||||||| | ||||||||||||||||    
T  20549903 gcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaatta 20549820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 12278943 - 12278862
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgtt-gtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||| ||||||||||||| |||||||| |||||| ||| || ||||||| |||||| | ||||||||||||||||||    
T  12278943 ggacactcctaggattaggtgtgtcccggtgtcagacacgcgttggtgtccgaca-cgacacatataattacactgaattatg 12278862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 43027411 - 43027501
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||| | |||||||| |||| |||||||||||||||||| || ||     ||||||||||||||||| |||||||| ||||||    
T  43027411 gcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatg 43027501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 40287309 - 40287385
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaat 246  Q
    |||||||||||||| ||||||||  ||| |||||||||||||     ||| ||||| |||||||||||||||||||||||||    
T  40287309 gcacggacactcctcggattaggcatgtcccggtgtcggaca-----tgtgtccgataccgacacttgtaattacactgaat 40287385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 24339765 - 24339701
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||| ||||||| |||||||| |||| ||||||||||| |||||| || ||||||||||||||    
T  24339765 gcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacac 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 32093961 - 32094052
Alignment:
Q  165 gcacggacactccttggattaggtgtgttcc-ggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| |||||||| |||||||| |||| || |||||||||||||||| || ||     ||||||||||| |||||||||||||||||||||    
T  32093961 gcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatg 32094052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 1401131 - 1401052
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||  |||||||||||| ||| |||||||||  ||| || || |||||||| |||| ||||||||||||||||||    
T  1401131 ggacactcctcagattaggtgtgtcccgatgtcggaca--tgtcgtgtcggacaccgatacttataattacactgaattatg 1401052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 25482014 - 25481929
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||| |||| ||| |||| | ||||| |  |||||||||| | | || ||||||||| |||||||||||||||||||||||||    
T  25482014 gcacggatactctttgaattaagcgtgtttcaatgtcggacacatatcgtgtccgacaccaacacttgtaattacactgaattatg 25481929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 18039058 - 18039026
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||    
T  18039058 cgacaccgacacttgtaattacactgaattatg 18039026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 21560562 - 21560530
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||    
T  21560562 cgacaccgacacttgtaattacactgaattatg 21560530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 24339701 - 24339669
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||    
T  24339701 cgacaccgacacttgtaattacactgaattatg 24339669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 26733411 - 26733331
Alignment:
Q  170 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| ||| |||||||| ||||||| || ||||||| | || || |||||||||||||| | |||||| |||||||||||    
T  26733411 gacacccctcggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatg 26733331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 27945100 - 27945068
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatg 27945068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 249
Target Start/End: Original strand, 11272586 - 11272617
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattat 249  Q
    ||||||||||||||||||||||||||||||||    
T  11272586 cgacaccgacacttgtaattacactgaattat 11272617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 11665376 - 11665439
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgaca 228  Q
    ||||||||| |||| | ||||| |||||| ||||||||||||||||| || | |||||||||||    
T  11665376 gcacggacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgttcgacaccgaca 11665439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 26033398 - 26033461
Alignment:
Q  166 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||||| |||||||||||||  |||| ||||||||||||  | || |||||||||||    
T  26033398 cacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacac 26033461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 17852112 - 17852066
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgt 211  Q
    |||||||||||||| | |||||||||||  |||||||||||||||||    
T  17852112 gcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgt 17852066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 28155631 - 28155597
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||| ||||||||    
T  28155631 tccgacaccgacacttgtaattacaccgaattatg 28155597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 8842286 - 8842323
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcg 202  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  8842286 gcacggacactccttggattaggcgtgtcccggtgtcg 8842323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 18035812 - 18035896
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||  ||||||| ||||| |||| ||||  ||||  |||| ||||| ||||||||| ||||||||||    
T  18035812 gcacggacactcctcggattagacgtgttcc-gtgtcagacatgtgtcctatctcacactgacacatgtaattacgctgaattatg 18035896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 21930736 - 21930687
Alignment:
Q  180 ggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||||||||| ||||||||||| |||| ||| |||| |||||    
T  21930736 ggattaggtgtgttccggcgtcggacacgtcttgtgtccaacactgacac 21930687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 22868155 - 22868110
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgt 214  Q
    |||||||||| |||||| |||||| |||||||| ||||||||||||    
T  22868155 ggacactcctcggattatgtgtgtcccggtgtctgacacgtgttgt 22868110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 247
Target Start/End: Complemental strand, 25822714 - 25822685
Alignment:
Q  218 cgacaccgacacttgtaattacactgaatt 247  Q
    ||||||||||||||||||||||||||||||    
T  25822714 cgacaccgacacttgtaattacactgaatt 25822685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 2334309 - 2334277
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||| |||||||    
T  2334309 cgacaccgacacttgtaattacactaaattatg 2334277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 3991383 - 3991351
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||| |||||||||||    
T  3991383 cgacaccgacacttgtaattatactgaattatg 3991351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 9408334 - 9408366
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||| |||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatg 9408366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 250
Target Start/End: Original strand, 26033465 - 26033493
Alignment:
Q  222 accgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||    
T  26033465 accgacacttgtaattacactgaattatg 26033493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 40332302 - 40332218
Alignment:
Q  166 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||| |||||||| | || ||||||| |||||||||| || ||| |||||||||||||||||||||||||||||||    
T  40332302 cacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatg 40332218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 15023208 - 15023288
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 249  Q
    |||||||||| |||||||  ||||||| |  |||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  15023208 ggacactcctcggattagacgtgttccagcatcggacacgtgtcgtatccgacatcgacacttgtaattacactgaattat 15023288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 36450701 - 36450783
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 247  Q
    |||| ||||||||| |||||||| |||| | ||||||||||||| || || ||||||||| ||||||||||||||||||||||    
T  36450701 gcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaatt 36450783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 5813704 - 5813627
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacact 242  Q
    ||||||||||||||   |||||| |||| |||||||||||||||||| || ||||||||||||||||||| |||||||    
T  5813704 gcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacact 5813627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 29510240 - 29510305
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacact 230  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| || || |||||||||||||||    
T  29510240 gcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacact 29510305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 31557104 - 31557023
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||| |||||||||||| |||| | ||||||||||| |||| || || |||||||| |||||||||||||||||||||||    
T  31557104 ggacacaccttggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatg 31557023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 4498415 - 4498342
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaatta 238  Q
    ||||||||||||||  ||||||||||||| |||||||||| || |||| ||| |||||||||||||| ||||||    
T  4498415 gcacggacactcctctgattaggtgtgtttcggtgtcggatacatgttatattcgacaccgacacttataatta 4498342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 20679346 - 20679427
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||| || | ||| |||| ||||||||||||||||||||  || ||||||||||||| ||||||||||||| ||||    
T  20679346 ggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatg 20679427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 926735 - 926815
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaa 245  Q
    |||||||||||||| |||| | |  ||| |||||||||||||||||| |  |||||||||||||||| |||||||||||||    
T  926735 gcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaa 926815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 314
Target Start/End: Complemental strand, 22596070 - 22595959
Alignment:
Q  201 cggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgnnnnnnnnnnnnaaattattagctgtgtcggcgtgttcgtgttgtgtccg 300  Q
    ||||||||||| |  ||||||||| |||||||||||||||||||||||||            ||||||||||||||||||||||||  ||||||||||||    
T  22596070 cggacacgtgtcgcgtccgacaccaacacttgtaattacactgaattatgttattttttt--aaattattagctgtgtcggcgtgtcagtgttgtgtccg 22595973  T
Q  301 gtatccgtgtccgt 314  Q
    || ||||| |||||    
T  22595972 gtgtccgtatccgt 22595959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 3951483 - 3951561
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactg 243  Q
    ||||||| ||||||||||||||| ||||||| ||||| ||||||||| || || ||||||||||| | ||| |||||||    
T  3951483 gcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacacatataagtacactg 3951561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 3025663 - 3025578
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||  ||||  | ||||| ||||||||| || |||||||| ||||| | ||||||||||||||||||    
T  3025663 gcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatg 3025578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 18407831 - 18407746
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||   |||||| |||| |  |||||||||| |||| || |||| || |||||||||||||||||||||||||||    
T  18407831 gcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatg 18407746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 33405331 - 33405416
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||| |||||||||  |||| | |||||| |||| |||| || |||||||||||||| | |||||||||| |||||||    
T  33405331 gcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatg 33405416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 22652099 - 22652035
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||||| |||||||  |||| |||||||||||||| ||| || ||||||||||||||    
T  22652099 gcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacac 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 34450968 - 34451032
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||||||||||| ||| |||| || ||||| ||||||||| || ||||||||||||||    
T  34450968 gcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 20873151 - 20873096
Alignment:
Q  195 cggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||| |||||||||| | || ||||||||||||||||||||||||||| |||||||    
T  20873151 cggtatcggacacgtatcgtgtccgacaccgacacttgtaattacactaaattatg 20873096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 24205756 - 24205819
Alignment:
Q  166 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||||| |||||||| ||||||||||||| |||| | ||||| | ||||||||||||    
T  24205756 cacggacactcctcggattaggcgtgttccggtgtcagacatgcgttgtgttcgacaccgacac 24205819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 4948713 - 4948679
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||||    
T  4948713 tccgacaccgacacttgtaattacactgaattatg 4948679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 8798804 - 8798842
Alignment:
Q  169 ggacactccttggattaggtgtgttccggtgtcggacac 207  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  8798804 ggacactccttggattaggcgtgttccggtgtcggacac 8798842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 43737758 - 43737836
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactg 243  Q
    ||||||||||||||||||| ||| || | || ||||| ||||| ||| || |||||||||||||| | |||||||||||    
T  43737758 gcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacacatataattacactg 43737836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 6065593 - 6065650
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgaca 222  Q
    |||||||||||||||| |||| | |||||||||||||||||| |||| || |||||||    
T  6065593 gcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgaca 6065650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 8343079 - 8342999
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||| ||||||| | |||||||| |||| |||||||||||||| |||      ||||||||||||||||||||||||| |||||||    
T  8343079 gcacagacactcttcggattaggcgtgtcccggtgtcggacacatgta-----cgacaccgacacttgtaattacactaaattatg 8342999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 26434292 - 26434207
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||| |||||| |||| |||| |||||||  ||||| |||||||| |||| ||| |||||||||||| |||||| | |||||||||    
T  26434292 gcacagacacttcttgaattatgtgtgttttggtgttggacacgtattgtgtccaacaccgacacttttaattatattgaattatg 26434207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 30077382 - 30077419
Alignment:
Q  213 gtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  30077382 gtatccgacacggacacttgtaattacactgaattatg 30077419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 14134810 - 14134726
Alignment:
Q  166 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||| | |||||| |||| | |||| ||||||||||| || |  ||||||||||  | ||||||||||||||||||    
T  14134810 cacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatg 14134726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 24669492 - 24669460
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatg 24669460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 25566900 - 25566868
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||    
T  25566900 cgacaccgacacttgtaattacactgaattatg 25566868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 204
Target Start/End: Original strand, 4673361 - 4673400
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcgga 204  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  4673361 gcacagacactccttggattaggcgtgttccggtgtcgga 4673400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 29447046 - 29447109
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgaca 228  Q
    |||||||||||||| |||||||| |||| | |||||| ||||| ||| || |||||||||||||    
T  29447046 gcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgaca 29447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 31580080 - 31580159
Alignment:
Q  171 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||| ||| |||||||||||||| |||||||| ||| |||| |  ||||||| |||||| | |||||||||| |||||||    
T  31580080 acacccctcggattaggtgtgtttcggtgtcgaacatgtgtcgcgtccgacatcgacacctataattacactcaattatg 31580159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 126295 - 126369
Alignment:
Q  166 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattaca 240  Q
    ||||||||||||| |||||||  |||| ||||| | |||||||||| || |||||||| ||||| | ||||||||    
T  126295 cacggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgacacatataattaca 126369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 4786324 - 4786370
Alignment:
Q  204 acacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    |||| ||| ||||||||||||||||| | ||||||||||||||||||    
T  4786324 acacatgtcgtatccgacaccgacacatataattacactgaattatg 4786370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 22197678 - 22197724
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgt 211  Q
    ||||||||||||||  ||||||| ||| |||||||||||||||||||    
T  22197678 gcacggacactcctcagattaggcgtgatccggtgtcggacacgtgt 22197724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 24613581 - 24613547
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||||| |||||||    
T  24613581 tccgacaccgacacttgtaattacacttaattatg 24613547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 30271253 - 30271287
Alignment:
Q  216 tccgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||| ||||||    
T  30271253 tccgacaccgacacttgtaattacactgcattatg 30271287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 40064074 - 40064032
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacac 207  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||    
T  40064074 gcacggacactcctcggattagatgtgtcccggtgtcggacac 40064032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 14513127 - 14513156
Alignment:
Q  177 cttggattaggtgtgttccggtgtcggaca 206  Q
    ||||||||||||||||||||||||||||||    
T  14513127 cttggattaggtgtgttccggtgtcggaca 14513156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 22943301 - 22943342
Alignment:
Q  170 gacactccttggattaggtgtgttccggtgtcggacacgtgt 211  Q
    ||||||||| |||||||| |||| ||||||||||||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgt 22943342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 24413506 - 24413591
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||| || |||||||  |||| ||| ||| |||||||  | || |||||||| ||||||| ||||||| ||||||||||    
T  24413506 gcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgacacttataattaccctgaattatg 24413591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 2572056 - 2572088
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||| |||||||    
T  2572056 cgacaccgacacttgtaattacactaaattatg 2572088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 11803382 - 11803318
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||||| |||||||  |||| || |||||||||| |||| |||||| ||||| ||||    
T  11803382 gcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacaccaacac 11803318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 15816065 - 15816129
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||| || |||||||| |||| |||||||||||  ||||| || ||||||||| ||||    
T  15816065 gcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacac 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 34127179 - 34127215
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtc 201  Q
    |||||||||||||||||||||||||||| | ||||||    
T  34127179 gcacggacactccttggattaggtgtgtccaggtgtc 34127215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 45477 - 45562
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| ||| || ||||||||||  |||  ||||||| ||||||||| || |||||||||||||||||||||||||||||||||||    
T  45477 gcacgtacaatctttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatg 45562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 8910 - 8833
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacact 242  Q
    ||||||| ||||||  ||||||| ||||  ||||||||||||||||| || |||||||||||||||||||||||||||    
T  8910 gcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacact 8833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 70390 - 70305
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| |||||| | ||||||||  ||| | |||||||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  70390 gcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatg 70305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 14639 - 14557
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||| ||||||||| ||||||| ||||  ||||||||||||||||| || ||||||||   ||||||||||||||||||||||||    
T  14639 gcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacac---cacttgtaattacactgaattatg 14557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 4828 - 4915
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatcc--gacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| |||||||| |||| || |||||||||| |||| || | |  |||||| |||||||||||||||||||||||||    
T  4828 gcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatg 4915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 71848 - 71784
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||| ||||||||| |||||||  |||| ||||||||||||||||||||| ||||||||||||||    
T  71848 gcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 71784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 174510 - 174585
Alignment:
Q  175 tccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||| |||||||| |||||||||| ||  || ||| ||||||||| |||||||||| ||||||||||    
T  174510 tccttggattaggcgtgttccgatgtcggacacatgacgtgtccaacaccgacatttgtaattacgctgaattatg 174585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 180023 - 180098
Alignment:
Q  175 tccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||| |||||||| |||||||||| ||  || ||| ||||||||| |||||||||| ||||||||||    
T  180023 tccttggattaggcgtgttccgatgtcggacacatgacgtgtccaacaccgacatttgtaattacgctgaattatg 180098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 249
Target Start/End: Complemental strand, 90949 - 90871
Alignment:
Q  171 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 249  Q
    |||||| |||||||||| |||||  ||||||||||||||||||| || |||| |||||  | |||||||||||||||||    
T  90949 acactcattggattaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattat 90871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 13518 - 13454
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||||||||||||||||||| |  ||||| ||| ||||| || ||||||||||||||    
T  13518 gcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 13454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 19682 - 19602
Alignment:
Q  175 tccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccg-----acacttgtaattacactgaattatg 250  Q
    |||| |||||| ||||||| ||||||||||||||||| || ||| ||||||     |||||||||||||||||||||||||    
T  19682 tcctcggattaagtgtgtttcggtgtcggacacgtgtcgtgtccaacaccgacataacacttgtaattacactgaattatg 19602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 21809 - 21873
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||||||||||||||||||| |  ||||| ||| ||||| || ||||||||||||||    
T  21809 gcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 21873  T

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Target: scaffold0086 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 3051 - 2987
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||||| |||||||| |||||||||||||| |||||||| || || || ||||||||    
T  3051 gcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacac 2987  T

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Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 241717 - 241653
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    ||||||||||| || |||||||| |||| |||||||||||||||||| || ||||||||| ||||    
T  241717 gcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacac 241653  T

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Target: scaffold0512 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 4983 - 5058
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattaca 240  Q
    |||| ||||||||| ||||||||  |||  |  |||||||||||||| || |||||||||||||||||||||||||    
T  4983 gcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacacttgtaattaca 5058  T

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Target: scaffold0475 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 3420 - 3338
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 247  Q
    |||||||||||||| |||||||| |||| || |||||   |||||||  | |||||||| |||||||||||||||||| ||||    
T  3420 gcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacacttgtaattacacttaatt 3338  T

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Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 53304 - 53239
Alignment:
Q  164 tgcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||| |||||||||   |||| ||||||||||||||||||  | ||||||||||||||    
T  53304 tgcacggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacac 53239  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 23829 - 23797
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||||||||||||||||||||||    
T  23829 cgacaccgacacttgtaattacactgaattatg 23797  T

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Target: scaffold0380 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 8713 - 8638
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattaca 240  Q
    ||||||||||||||||||||||| || | || ||||||||||||||| || | | |||| |||||  |||||||||    
T  8713 gcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgttcaacacagacacgagtaattaca 8638  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 250
Target Start/End: Complemental strand, 123686 - 123655
Alignment:
Q  219 gacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatg 123655  T

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Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 83219 - 83187
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||| |||||||||||||||||||||    
T  83219 cgacaccgacatttgtaattacactgaattatg 83187  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 13534 - 13472
Alignment:
Q  167 acggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||| ||||||||||| | ||| ||||| | |||||| || ||||||||||||||    
T  13534 acggacactcctcggattaggtgtatcccgatgtcgtatacgtgtcgtgtccgacaccgacac 13472  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 250
Target Start/End: Complemental strand, 130538 - 130509
Alignment:
Q  221 caccgacacttgtaattacactgaattatg 250  Q
    ||||||||||||||||||||||||||||||    
T  130538 caccgacacttgtaattacactgaattatg 130509  T

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Target: scaffold0722 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 7020 - 7064
Alignment:
Q  206 acgtgttgtatccgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||| ||||||||| ||||||||||||| ||| |||||||    
T  7020 acgtgttgtgtccgacacctacacttgtaattatactaaattatg 7064  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 8571 - 8635
Alignment:
Q  165 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 229  Q
    |||||||||||||| | |||||| |||| || ||||||||||||| | || ||||| ||||||||    
T  8571 gcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacac 8635  T

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Target: scaffold0223 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 20231 - 20199
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||| ||||||||||||||||||||||||||    
T  20231 cgacactgacacttgtaattacactgaattatg 20199  T

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Target: scaffold0171 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 23479 - 23447
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||||||||||| ||||||||||||||||||    
T  23479 cgacaccgacacttataattacactgaattatg 23447  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 3849 - 3881
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    |||||| ||||||||||||||||||||||||||    
T  3849 cgacactgacacttgtaattacactgaattatg 3881  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 46741 - 46709
Alignment:
Q  218 cgacaccgacacttgtaattacactgaattatg 250  Q
    ||||||||||| |||||||||||||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatg 46709  T

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